2023-08-10T14:06:44,658 Created temporary directory: /tmp/pip-build-tracker-st1wq8pz 2023-08-10T14:06:44,661 Initialized build tracking at /tmp/pip-build-tracker-st1wq8pz 2023-08-10T14:06:44,662 Created build tracker: /tmp/pip-build-tracker-st1wq8pz 2023-08-10T14:06:44,662 Entered build tracker: /tmp/pip-build-tracker-st1wq8pz 2023-08-10T14:06:44,663 Created temporary directory: /tmp/pip-wheel-k9volfux 2023-08-10T14:06:44,672 Created temporary directory: /tmp/pip-ephem-wheel-cache-21j96e4b 2023-08-10T14:06:44,731 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-08-10T14:06:44,740 2 location(s) to search for versions of tb-variant-filter: 2023-08-10T14:06:44,740 * https://pypi.org/simple/tb-variant-filter/ 2023-08-10T14:06:44,740 * https://www.piwheels.org/simple/tb-variant-filter/ 2023-08-10T14:06:44,741 Fetching project page and analyzing links: https://pypi.org/simple/tb-variant-filter/ 2023-08-10T14:06:44,742 Getting page https://pypi.org/simple/tb-variant-filter/ 2023-08-10T14:06:44,746 Found index url https://pypi.org/simple/ 2023-08-10T14:06:44,935 Fetched page https://pypi.org/simple/tb-variant-filter/ as application/vnd.pypi.simple.v1+json 2023-08-10T14:06:44,943 Skipping link: No binaries permitted for tb-variant-filter: https://files.pythonhosted.org/packages/63/86/526631b1d3c4673322cacf55a005b8d511beba585ded2d92598f8b811b59/tb_variant_filter-0.3.1-py3-none-any.whl (from https://pypi.org/simple/tb-variant-filter/) (requires-python:>=3.7) 2023-08-10T14:06:44,945 Found link https://files.pythonhosted.org/packages/4c/c4/1b0f2332c74f0ecf9aa8859d1cfe4ce1f50091be027878409b78e3859957/tb_variant_filter-0.3.1.tar.gz (from https://pypi.org/simple/tb-variant-filter/) (requires-python:>=3.7), version: 0.3.1 2023-08-10T14:06:44,946 Skipping link: No binaries permitted for tb-variant-filter: https://files.pythonhosted.org/packages/a8/79/7e1935bf79f1812a358a83bb3b2b270a601001538a849fbb46669eefe206/tb_variant_filter-0.3.2-py3-none-any.whl (from https://pypi.org/simple/tb-variant-filter/) (requires-python:>=3.7) 2023-08-10T14:06:44,947 Found link https://files.pythonhosted.org/packages/30/eb/84130cd3cc8988ad482f4c9db0010c57e712cc31e33fe3a36100bdc0e60a/tb_variant_filter-0.3.2.tar.gz (from https://pypi.org/simple/tb-variant-filter/) (requires-python:>=3.7), version: 0.3.2 2023-08-10T14:06:44,948 Skipping link: No binaries permitted for tb-variant-filter: https://files.pythonhosted.org/packages/fd/ba/5e514cda8a0482bc317fd9c5c668d965a16e5521229b237945189d293a4a/tb_variant_filter-0.3.3-py3-none-any.whl (from https://pypi.org/simple/tb-variant-filter/) (requires-python:>=3.7) 2023-08-10T14:06:44,949 Found link https://files.pythonhosted.org/packages/79/34/24ad8a04c119179dd49b6547347763ee18f95b10f13c1f9db208e82a2de4/tb_variant_filter-0.3.3.tar.gz (from https://pypi.org/simple/tb-variant-filter/) (requires-python:>=3.7), version: 0.3.3 2023-08-10T14:06:44,950 Skipping link: No binaries permitted for tb-variant-filter: https://files.pythonhosted.org/packages/a8/6a/f08b7c65c023405c30c286f2315d0db7333908e38536b6e776ac94936efa/tb_variant_filter-0.3.4-py3-none-any.whl (from https://pypi.org/simple/tb-variant-filter/) (requires-python:>=3.7) 2023-08-10T14:06:44,951 Found link https://files.pythonhosted.org/packages/2e/b3/227b3e674d2176ed0d1c12c7e8beafe25e9d0e814236ef5a2659eff74c19/tb_variant_filter-0.3.4.tar.gz (from https://pypi.org/simple/tb-variant-filter/) (requires-python:>=3.7), version: 0.3.4 2023-08-10T14:06:44,952 Skipping link: No binaries permitted for tb-variant-filter: https://files.pythonhosted.org/packages/89/9c/6a30d31e6072d73100e14905c7eabf9701b947a0ed3292339f758cd9f787/tb_variant_filter-0.3.5-py3-none-any.whl (from https://pypi.org/simple/tb-variant-filter/) (requires-python:>=3.7) 2023-08-10T14:06:44,953 Found link https://files.pythonhosted.org/packages/66/09/95aff936735ce9c31a81d68c898938fe455620c64042955c2b7d8be97210/tb_variant_filter-0.3.5.tar.gz (from https://pypi.org/simple/tb-variant-filter/) (requires-python:>=3.7), version: 0.3.5 2023-08-10T14:06:44,954 Skipping link: No binaries permitted for tb-variant-filter: https://files.pythonhosted.org/packages/62/a4/fc7c1ce73aac946be1843a2c861e40faa1c996f14ea861b306b8155f9dea/tb_variant_filter-0.3.6-py3-none-any.whl (from https://pypi.org/simple/tb-variant-filter/) (requires-python:>=3.7) 2023-08-10T14:06:44,955 Found link https://files.pythonhosted.org/packages/d5/56/694768307f554e6a124082f9bf0463718637d970b2e1e576c949ec09e1eb/tb_variant_filter-0.3.6.tar.gz (from https://pypi.org/simple/tb-variant-filter/) (requires-python:>=3.7), version: 0.3.6 2023-08-10T14:06:44,956 Skipping link: No binaries permitted for tb-variant-filter: https://files.pythonhosted.org/packages/f9/d3/c987006d028567504a6cdea642435d0bc176ddf42abc908f1335dcaa6939/tb_variant_filter-0.4.0-py3-none-any.whl (from https://pypi.org/simple/tb-variant-filter/) (requires-python:>=3.7) 2023-08-10T14:06:44,957 Found link https://files.pythonhosted.org/packages/0b/6b/ec057790b0040cd60182cca15f7239f02c593ee9f305b3dc32bf493f7ccc/tb_variant_filter-0.4.0.tar.gz (from https://pypi.org/simple/tb-variant-filter/) (requires-python:>=3.7), version: 0.4.0 2023-08-10T14:06:44,958 Fetching project page and analyzing links: https://www.piwheels.org/simple/tb-variant-filter/ 2023-08-10T14:06:44,959 Getting page https://www.piwheels.org/simple/tb-variant-filter/ 2023-08-10T14:06:44,961 Found index url https://www.piwheels.org/simple/ 2023-08-10T14:06:45,270 Fetched page https://www.piwheels.org/simple/tb-variant-filter/ as text/html 2023-08-10T14:06:45,276 Skipping link: No binaries permitted for tb-variant-filter: https://www.piwheels.org/simple/tb-variant-filter/tb_variant_filter-0.3.6-py3-none-any.whl#sha256=42955c8243625dff4efcc84f5c4ece07ce8999a78fcbe45472fb7f8003e462a4 (from https://www.piwheels.org/simple/tb-variant-filter/) (requires-python:>=3.7) 2023-08-10T14:06:45,277 Skipping link: No binaries permitted for tb-variant-filter: https://www.piwheels.org/simple/tb-variant-filter/tb_variant_filter-0.3.5-py3-none-any.whl#sha256=ded8db10188807cc56bb56d97652ce9b8dfd509d5488082ac65972eb08ddc4a3 (from https://www.piwheels.org/simple/tb-variant-filter/) (requires-python:>=3.7) 2023-08-10T14:06:45,278 Skipping link: No binaries permitted for tb-variant-filter: https://www.piwheels.org/simple/tb-variant-filter/tb_variant_filter-0.3.4-py3-none-any.whl#sha256=5e96556e64a1006634a3007d2dcec6fb9630da44247c39ab83913856bbfd5bae (from https://www.piwheels.org/simple/tb-variant-filter/) (requires-python:>=3.7) 2023-08-10T14:06:45,278 Skipping link: No binaries permitted for tb-variant-filter: https://www.piwheels.org/simple/tb-variant-filter/tb_variant_filter-0.3.3-py3-none-any.whl#sha256=8614c11d4a700230701cdd1130a991f65321df6eb71b72b86e028327f138e5ac (from https://www.piwheels.org/simple/tb-variant-filter/) (requires-python:>=3.7) 2023-08-10T14:06:45,279 Skipping link: No binaries permitted for tb-variant-filter: https://www.piwheels.org/simple/tb-variant-filter/tb_variant_filter-0.3.2-py3-none-any.whl#sha256=111e357f27d6b0365e11eafc477cbaad7ffbb79c1817262d6b853182285348fd (from https://www.piwheels.org/simple/tb-variant-filter/) (requires-python:>=3.7) 2023-08-10T14:06:45,279 Skipping link: No binaries permitted for tb-variant-filter: https://www.piwheels.org/simple/tb-variant-filter/tb_variant_filter-0.3.1-py3-none-any.whl#sha256=279b3d9f4f39f8b68a88450613c75e53eefa8e49fbe2263ce4333343a8736151 (from https://www.piwheels.org/simple/tb-variant-filter/) (requires-python:>=3.7) 2023-08-10T14:06:45,280 Skipping link: not a file: https://www.piwheels.org/simple/tb-variant-filter/ 2023-08-10T14:06:45,280 Skipping link: not a file: https://pypi.org/simple/tb-variant-filter/ 2023-08-10T14:06:45,315 Given no hashes to check 1 links for project 'tb-variant-filter': discarding no candidates 2023-08-10T14:06:45,345 Collecting tb-variant-filter==0.4.0 2023-08-10T14:06:45,350 Created temporary directory: /tmp/pip-unpack-4kgcndcy 2023-08-10T14:06:45,521 Downloading tb_variant_filter-0.4.0.tar.gz (61 kB) 2023-08-10T14:06:45,791 Added tb-variant-filter==0.4.0 from https://files.pythonhosted.org/packages/0b/6b/ec057790b0040cd60182cca15f7239f02c593ee9f305b3dc32bf493f7ccc/tb_variant_filter-0.4.0.tar.gz to build tracker '/tmp/pip-build-tracker-st1wq8pz' 2023-08-10T14:06:45,801 Created temporary directory: /tmp/pip-build-env-w90ero1y 2023-08-10T14:06:45,821 Installing build dependencies: started 2023-08-10T14:06:45,823 Running command pip subprocess to install build dependencies 2023-08-10T14:06:48,510 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2023-08-10T14:06:49,310 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-08-10T14:06:53,378 Collecting setuptools>=42 2023-08-10T14:06:53,556 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB) 2023-08-10T14:06:54,190 Collecting wheel 2023-08-10T14:06:54,229 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.1-py3-none-any.whl (64 kB) 2023-08-10T14:06:59,575 Installing collected packages: wheel, setuptools 2023-08-10T14:07:00,029 Creating /tmp/pip-build-env-w90ero1y/overlay/bin 2023-08-10T14:07:00,034 changing mode of /tmp/pip-build-env-w90ero1y/overlay/bin/wheel to 755 2023-08-10T14:07:04,276 Successfully installed setuptools-68.0.0 wheel-0.41.1 2023-08-10T14:07:04,307 [notice] A new release of pip is available: 23.1.2 -> 23.2.1 2023-08-10T14:07:04,308 [notice] To update, run: python3 -m pip install --upgrade pip 2023-08-10T14:07:04,743 Installing build dependencies: finished with status 'done' 2023-08-10T14:07:04,755 Getting requirements to build wheel: started 2023-08-10T14:07:04,757 Running command Getting requirements to build wheel 2023-08-10T14:07:06,223 running egg_info 2023-08-10T14:07:06,234 writing src/tb_variant_filter.egg-info/PKG-INFO 2023-08-10T14:07:06,239 writing dependency_links to src/tb_variant_filter.egg-info/dependency_links.txt 2023-08-10T14:07:06,243 writing entry points to src/tb_variant_filter.egg-info/entry_points.txt 2023-08-10T14:07:06,246 writing requirements to src/tb_variant_filter.egg-info/requires.txt 2023-08-10T14:07:06,249 writing top-level names to src/tb_variant_filter.egg-info/top_level.txt 2023-08-10T14:07:06,299 reading manifest file 'src/tb_variant_filter.egg-info/SOURCES.txt' 2023-08-10T14:07:06,305 adding license file 'COPYING' 2023-08-10T14:07:06,315 writing manifest file 'src/tb_variant_filter.egg-info/SOURCES.txt' 2023-08-10T14:07:06,431 Getting requirements to build wheel: finished with status 'done' 2023-08-10T14:07:06,452 Created temporary directory: /tmp/pip-modern-metadata-y5abctfo 2023-08-10T14:07:06,457 Preparing metadata (pyproject.toml): started 2023-08-10T14:07:06,460 Running command Preparing metadata (pyproject.toml) 2023-08-10T14:07:07,735 running dist_info 2023-08-10T14:07:07,772 creating /tmp/pip-modern-metadata-y5abctfo/tb_variant_filter.egg-info 2023-08-10T14:07:07,781 writing /tmp/pip-modern-metadata-y5abctfo/tb_variant_filter.egg-info/PKG-INFO 2023-08-10T14:07:07,786 writing dependency_links to /tmp/pip-modern-metadata-y5abctfo/tb_variant_filter.egg-info/dependency_links.txt 2023-08-10T14:07:07,790 writing entry points to /tmp/pip-modern-metadata-y5abctfo/tb_variant_filter.egg-info/entry_points.txt 2023-08-10T14:07:07,793 writing requirements to /tmp/pip-modern-metadata-y5abctfo/tb_variant_filter.egg-info/requires.txt 2023-08-10T14:07:07,796 writing top-level names to /tmp/pip-modern-metadata-y5abctfo/tb_variant_filter.egg-info/top_level.txt 2023-08-10T14:07:07,798 writing manifest file '/tmp/pip-modern-metadata-y5abctfo/tb_variant_filter.egg-info/SOURCES.txt' 2023-08-10T14:07:07,844 reading manifest file '/tmp/pip-modern-metadata-y5abctfo/tb_variant_filter.egg-info/SOURCES.txt' 2023-08-10T14:07:07,848 adding license file 'COPYING' 2023-08-10T14:07:07,856 writing manifest file '/tmp/pip-modern-metadata-y5abctfo/tb_variant_filter.egg-info/SOURCES.txt' 2023-08-10T14:07:07,858 creating '/tmp/pip-modern-metadata-y5abctfo/tb_variant_filter-0.4.0.dist-info' 2023-08-10T14:07:08,187 Preparing metadata (pyproject.toml): finished with status 'done' 2023-08-10T14:07:08,202 Source in /tmp/pip-wheel-k9volfux/tb-variant-filter_e9452b4d80f34f6ebc23cbebbe4808e6 has version 0.4.0, which satisfies requirement tb-variant-filter==0.4.0 from https://files.pythonhosted.org/packages/0b/6b/ec057790b0040cd60182cca15f7239f02c593ee9f305b3dc32bf493f7ccc/tb_variant_filter-0.4.0.tar.gz 2023-08-10T14:07:08,204 Removed tb-variant-filter==0.4.0 from https://files.pythonhosted.org/packages/0b/6b/ec057790b0040cd60182cca15f7239f02c593ee9f305b3dc32bf493f7ccc/tb_variant_filter-0.4.0.tar.gz from build tracker '/tmp/pip-build-tracker-st1wq8pz' 2023-08-10T14:07:08,219 Created temporary directory: /tmp/pip-unpack-5ky9p1fa 2023-08-10T14:07:08,220 Building wheels for collected packages: tb-variant-filter 2023-08-10T14:07:08,230 Created temporary directory: /tmp/pip-wheel-p27sz66c 2023-08-10T14:07:08,230 Destination directory: /tmp/pip-wheel-p27sz66c 2023-08-10T14:07:08,235 Building wheel for tb-variant-filter (pyproject.toml): started 2023-08-10T14:07:08,239 Running command Building wheel for tb-variant-filter (pyproject.toml) 2023-08-10T14:07:09,606 running bdist_wheel 2023-08-10T14:07:09,709 running build 2023-08-10T14:07:09,709 running build_py 2023-08-10T14:07:09,730 creating build 2023-08-10T14:07:09,731 creating build/lib 2023-08-10T14:07:09,732 creating build/lib/tb_variant_filter 2023-08-10T14:07:09,735 copying src/tb_variant_filter/bed_to_regions_cli.py -> build/lib/tb_variant_filter 2023-08-10T14:07:09,738 copying src/tb_variant_filter/cli.py -> build/lib/tb_variant_filter 2023-08-10T14:07:09,742 copying src/tb_variant_filter/regions_to_bed.py -> build/lib/tb_variant_filter 2023-08-10T14:07:09,745 copying src/tb_variant_filter/region_list.py -> build/lib/tb_variant_filter 2023-08-10T14:07:09,749 copying src/tb_variant_filter/__init__.py -> build/lib/tb_variant_filter 2023-08-10T14:07:09,755 creating build/lib/tests 2023-08-10T14:07:09,757 copying src/tests/test_region_filter.py -> build/lib/tests 2023-08-10T14:07:09,760 copying src/tests/test_region_list.py -> build/lib/tests 2023-08-10T14:07:09,764 copying src/tests/test_mtbseq.py -> build/lib/tests 2023-08-10T14:07:09,767 copying src/tests/test_snv_filter.py -> build/lib/tests 2023-08-10T14:07:09,770 copying src/tests/test_farhat_rlc.py -> build/lib/tests 2023-08-10T14:07:09,773 copying src/tests/test_farhat_rlc_lowmap.py -> build/lib/tests 2023-08-10T14:07:09,777 copying src/tests/test_alt_percentage_filter.py -> build/lib/tests 2023-08-10T14:07:09,780 copying src/tests/test_min_depth_filter.py -> build/lib/tests 2023-08-10T14:07:09,783 copying src/tests/utils.py -> build/lib/tests 2023-08-10T14:07:09,787 copying src/tests/test_close_to_indel_filter.py -> build/lib/tests 2023-08-10T14:07:09,790 copying src/tests/__init__.py -> build/lib/tests 2023-08-10T14:07:09,793 copying src/tests/test_multiple_ann_records.py -> build/lib/tests 2023-08-10T14:07:09,796 copying src/tests/test_uvp.py -> build/lib/tests 2023-08-10T14:07:09,799 copying src/tests/test_pe_ppe.py -> build/lib/tests 2023-08-10T14:07:09,802 copying src/tests/test_tbprofiler.py -> build/lib/tests 2023-08-10T14:07:09,808 creating build/lib/tb_variant_filter/masks 2023-08-10T14:07:09,809 copying src/tb_variant_filter/masks/farhat_rlc.py -> build/lib/tb_variant_filter/masks 2023-08-10T14:07:09,816 copying src/tb_variant_filter/masks/uvp.py -> build/lib/tb_variant_filter/masks 2023-08-10T14:07:09,821 copying src/tb_variant_filter/masks/farhat_rlc_lowmap.py -> build/lib/tb_variant_filter/masks 2023-08-10T14:07:09,830 copying src/tb_variant_filter/masks/tbprofiler.py -> build/lib/tb_variant_filter/masks 2023-08-10T14:07:09,834 copying src/tb_variant_filter/masks/mtbseq.py -> build/lib/tb_variant_filter/masks 2023-08-10T14:07:09,838 copying src/tb_variant_filter/masks/__init__.py -> build/lib/tb_variant_filter/masks 2023-08-10T14:07:09,842 copying src/tb_variant_filter/masks/pe_ppe.py -> build/lib/tb_variant_filter/masks 2023-08-10T14:07:09,848 creating build/lib/tb_variant_filter/filters 2023-08-10T14:07:09,850 copying src/tb_variant_filter/filters/region_filter.py -> build/lib/tb_variant_filter/filters 2023-08-10T14:07:09,853 copying src/tb_variant_filter/filters/min_depth_filter.py -> build/lib/tb_variant_filter/filters 2023-08-10T14:07:09,857 copying src/tb_variant_filter/filters/alt_percentage_filter.py -> build/lib/tb_variant_filter/filters 2023-08-10T14:07:09,861 copying src/tb_variant_filter/filters/snv_only_filter.py -> build/lib/tb_variant_filter/filters 2023-08-10T14:07:09,864 copying src/tb_variant_filter/filters/__init__.py -> build/lib/tb_variant_filter/filters 2023-08-10T14:07:09,868 copying src/tb_variant_filter/filters/close_to_indel_filter.py -> build/lib/tb_variant_filter/filters 2023-08-10T14:07:09,910 installing to build/bdist.linux-armv7l/wheel 2023-08-10T14:07:09,910 running install 2023-08-10T14:07:09,970 running install_lib 2023-08-10T14:07:09,986 creating build/bdist.linux-armv7l 2023-08-10T14:07:09,987 creating build/bdist.linux-armv7l/wheel 2023-08-10T14:07:09,991 creating build/bdist.linux-armv7l/wheel/tb_variant_filter 2023-08-10T14:07:09,993 copying build/lib/tb_variant_filter/bed_to_regions_cli.py -> build/bdist.linux-armv7l/wheel/tb_variant_filter 2023-08-10T14:07:09,999 creating build/bdist.linux-armv7l/wheel/tb_variant_filter/masks 2023-08-10T14:07:10,000 copying build/lib/tb_variant_filter/masks/farhat_rlc.py -> build/bdist.linux-armv7l/wheel/tb_variant_filter/masks 2023-08-10T14:07:10,008 copying build/lib/tb_variant_filter/masks/uvp.py -> build/bdist.linux-armv7l/wheel/tb_variant_filter/masks 2023-08-10T14:07:10,013 copying build/lib/tb_variant_filter/masks/farhat_rlc_lowmap.py -> build/bdist.linux-armv7l/wheel/tb_variant_filter/masks 2023-08-10T14:07:10,024 copying build/lib/tb_variant_filter/masks/tbprofiler.py -> build/bdist.linux-armv7l/wheel/tb_variant_filter/masks 2023-08-10T14:07:10,029 copying build/lib/tb_variant_filter/masks/mtbseq.py -> build/bdist.linux-armv7l/wheel/tb_variant_filter/masks 2023-08-10T14:07:10,033 copying build/lib/tb_variant_filter/masks/__init__.py -> build/bdist.linux-armv7l/wheel/tb_variant_filter/masks 2023-08-10T14:07:10,037 copying build/lib/tb_variant_filter/masks/pe_ppe.py -> build/bdist.linux-armv7l/wheel/tb_variant_filter/masks 2023-08-10T14:07:10,042 copying build/lib/tb_variant_filter/cli.py -> build/bdist.linux-armv7l/wheel/tb_variant_filter 2023-08-10T14:07:10,046 copying build/lib/tb_variant_filter/regions_to_bed.py -> build/bdist.linux-armv7l/wheel/tb_variant_filter 2023-08-10T14:07:10,050 copying build/lib/tb_variant_filter/region_list.py -> build/bdist.linux-armv7l/wheel/tb_variant_filter 2023-08-10T14:07:10,055 copying build/lib/tb_variant_filter/__init__.py -> build/bdist.linux-armv7l/wheel/tb_variant_filter 2023-08-10T14:07:10,060 creating build/bdist.linux-armv7l/wheel/tb_variant_filter/filters 2023-08-10T14:07:10,062 copying build/lib/tb_variant_filter/filters/region_filter.py -> build/bdist.linux-armv7l/wheel/tb_variant_filter/filters 2023-08-10T14:07:10,067 copying build/lib/tb_variant_filter/filters/min_depth_filter.py -> build/bdist.linux-armv7l/wheel/tb_variant_filter/filters 2023-08-10T14:07:10,072 copying build/lib/tb_variant_filter/filters/alt_percentage_filter.py -> build/bdist.linux-armv7l/wheel/tb_variant_filter/filters 2023-08-10T14:07:10,076 copying build/lib/tb_variant_filter/filters/snv_only_filter.py -> build/bdist.linux-armv7l/wheel/tb_variant_filter/filters 2023-08-10T14:07:10,081 copying build/lib/tb_variant_filter/filters/__init__.py -> build/bdist.linux-armv7l/wheel/tb_variant_filter/filters 2023-08-10T14:07:10,085 copying build/lib/tb_variant_filter/filters/close_to_indel_filter.py -> build/bdist.linux-armv7l/wheel/tb_variant_filter/filters 2023-08-10T14:07:10,090 creating build/bdist.linux-armv7l/wheel/tests 2023-08-10T14:07:10,093 copying build/lib/tests/test_region_filter.py -> build/bdist.linux-armv7l/wheel/tests 2023-08-10T14:07:10,097 copying build/lib/tests/test_region_list.py -> build/bdist.linux-armv7l/wheel/tests 2023-08-10T14:07:10,101 copying build/lib/tests/test_mtbseq.py -> build/bdist.linux-armv7l/wheel/tests 2023-08-10T14:07:10,105 copying build/lib/tests/test_snv_filter.py -> build/bdist.linux-armv7l/wheel/tests 2023-08-10T14:07:10,109 copying build/lib/tests/test_farhat_rlc.py -> build/bdist.linux-armv7l/wheel/tests 2023-08-10T14:07:10,113 copying build/lib/tests/test_farhat_rlc_lowmap.py -> build/bdist.linux-armv7l/wheel/tests 2023-08-10T14:07:10,117 copying build/lib/tests/test_alt_percentage_filter.py -> build/bdist.linux-armv7l/wheel/tests 2023-08-10T14:07:10,121 copying build/lib/tests/test_min_depth_filter.py -> build/bdist.linux-armv7l/wheel/tests 2023-08-10T14:07:10,125 copying build/lib/tests/utils.py -> build/bdist.linux-armv7l/wheel/tests 2023-08-10T14:07:10,129 copying build/lib/tests/test_close_to_indel_filter.py -> build/bdist.linux-armv7l/wheel/tests 2023-08-10T14:07:10,134 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2023-08-10T14:07:10,137 copying build/lib/tests/test_multiple_ann_records.py -> build/bdist.linux-armv7l/wheel/tests 2023-08-10T14:07:10,141 copying build/lib/tests/test_uvp.py -> build/bdist.linux-armv7l/wheel/tests 2023-08-10T14:07:10,146 copying build/lib/tests/test_pe_ppe.py -> build/bdist.linux-armv7l/wheel/tests 2023-08-10T14:07:10,149 copying build/lib/tests/test_tbprofiler.py -> build/bdist.linux-armv7l/wheel/tests 2023-08-10T14:07:10,153 running install_egg_info 2023-08-10T14:07:10,178 running egg_info 2023-08-10T14:07:10,187 writing src/tb_variant_filter.egg-info/PKG-INFO 2023-08-10T14:07:10,192 writing dependency_links to src/tb_variant_filter.egg-info/dependency_links.txt 2023-08-10T14:07:10,195 writing entry points to src/tb_variant_filter.egg-info/entry_points.txt 2023-08-10T14:07:10,197 writing requirements to src/tb_variant_filter.egg-info/requires.txt 2023-08-10T14:07:10,199 writing top-level names to src/tb_variant_filter.egg-info/top_level.txt 2023-08-10T14:07:10,222 reading manifest file 'src/tb_variant_filter.egg-info/SOURCES.txt' 2023-08-10T14:07:10,228 adding license file 'COPYING' 2023-08-10T14:07:10,237 writing manifest file 'src/tb_variant_filter.egg-info/SOURCES.txt' 2023-08-10T14:07:10,240 Copying src/tb_variant_filter.egg-info to build/bdist.linux-armv7l/wheel/tb_variant_filter-0.4.0-py3.7.egg-info 2023-08-10T14:07:10,262 running install_scripts 2023-08-10T14:07:10,301 creating build/bdist.linux-armv7l/wheel/tb_variant_filter-0.4.0.dist-info/WHEEL 2023-08-10T14:07:10,306 creating '/tmp/pip-wheel-p27sz66c/.tmp-ane3coty/tb_variant_filter-0.4.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-08-10T14:07:10,311 adding 'tb_variant_filter/__init__.py' 2023-08-10T14:07:10,314 adding 'tb_variant_filter/bed_to_regions_cli.py' 2023-08-10T14:07:10,317 adding 'tb_variant_filter/cli.py' 2023-08-10T14:07:10,320 adding 'tb_variant_filter/region_list.py' 2023-08-10T14:07:10,323 adding 'tb_variant_filter/regions_to_bed.py' 2023-08-10T14:07:10,328 adding 'tb_variant_filter/filters/__init__.py' 2023-08-10T14:07:10,331 adding 'tb_variant_filter/filters/alt_percentage_filter.py' 2023-08-10T14:07:10,334 adding 'tb_variant_filter/filters/close_to_indel_filter.py' 2023-08-10T14:07:10,337 adding 'tb_variant_filter/filters/min_depth_filter.py' 2023-08-10T14:07:10,340 adding 'tb_variant_filter/filters/region_filter.py' 2023-08-10T14:07:10,342 adding 'tb_variant_filter/filters/snv_only_filter.py' 2023-08-10T14:07:10,347 adding 'tb_variant_filter/masks/__init__.py' 2023-08-10T14:07:10,359 adding 'tb_variant_filter/masks/farhat_rlc.py' 2023-08-10T14:07:10,381 adding 'tb_variant_filter/masks/farhat_rlc_lowmap.py' 2023-08-10T14:07:10,387 adding 'tb_variant_filter/masks/mtbseq.py' 2023-08-10T14:07:10,392 adding 'tb_variant_filter/masks/pe_ppe.py' 2023-08-10T14:07:10,395 adding 'tb_variant_filter/masks/tbprofiler.py' 2023-08-10T14:07:10,400 adding 'tb_variant_filter/masks/uvp.py' 2023-08-10T14:07:10,407 adding 'tests/__init__.py' 2023-08-10T14:07:10,409 adding 'tests/test_alt_percentage_filter.py' 2023-08-10T14:07:10,412 adding 'tests/test_close_to_indel_filter.py' 2023-08-10T14:07:10,414 adding 'tests/test_farhat_rlc.py' 2023-08-10T14:07:10,417 adding 'tests/test_farhat_rlc_lowmap.py' 2023-08-10T14:07:10,419 adding 'tests/test_min_depth_filter.py' 2023-08-10T14:07:10,422 adding 'tests/test_mtbseq.py' 2023-08-10T14:07:10,424 adding 'tests/test_multiple_ann_records.py' 2023-08-10T14:07:10,427 adding 'tests/test_pe_ppe.py' 2023-08-10T14:07:10,429 adding 'tests/test_region_filter.py' 2023-08-10T14:07:10,432 adding 'tests/test_region_list.py' 2023-08-10T14:07:10,434 adding 'tests/test_snv_filter.py' 2023-08-10T14:07:10,436 adding 'tests/test_tbprofiler.py' 2023-08-10T14:07:10,439 adding 'tests/test_uvp.py' 2023-08-10T14:07:10,441 adding 'tests/utils.py' 2023-08-10T14:07:10,455 adding 'tb_variant_filter-0.4.0.dist-info/COPYING' 2023-08-10T14:07:10,459 adding 'tb_variant_filter-0.4.0.dist-info/METADATA' 2023-08-10T14:07:10,461 adding 'tb_variant_filter-0.4.0.dist-info/WHEEL' 2023-08-10T14:07:10,463 adding 'tb_variant_filter-0.4.0.dist-info/entry_points.txt' 2023-08-10T14:07:10,465 adding 'tb_variant_filter-0.4.0.dist-info/top_level.txt' 2023-08-10T14:07:10,468 adding 'tb_variant_filter-0.4.0.dist-info/RECORD' 2023-08-10T14:07:10,473 removing build/bdist.linux-armv7l/wheel 2023-08-10T14:07:10,631 Building wheel for tb-variant-filter (pyproject.toml): finished with status 'done' 2023-08-10T14:07:10,647 Created wheel for tb-variant-filter: filename=tb_variant_filter-0.4.0-py3-none-any.whl size=75401 sha256=b92a7990dab3db04c2692dac6bd34cca04bb1d73ed8f06ed8f4abf89e7a5dbd3 2023-08-10T14:07:10,649 Stored in directory: /tmp/pip-ephem-wheel-cache-21j96e4b/wheels/8b/4f/69/6326db2fe4826590d372c0e55e0ddca94110a13d272289658e 2023-08-10T14:07:10,681 Successfully built tb-variant-filter 2023-08-10T14:07:10,693 Removed build tracker: '/tmp/pip-build-tracker-st1wq8pz'