2023-08-16T21:05:49,109 Created temporary directory: /tmp/pip-build-tracker-j3gqxiv2
2023-08-16T21:05:49,112 Initialized build tracking at /tmp/pip-build-tracker-j3gqxiv2
2023-08-16T21:05:49,112 Created build tracker: /tmp/pip-build-tracker-j3gqxiv2
2023-08-16T21:05:49,112 Entered build tracker: /tmp/pip-build-tracker-j3gqxiv2
2023-08-16T21:05:49,114 Created temporary directory: /tmp/pip-wheel-p5zj6839
2023-08-16T21:05:49,122 Created temporary directory: /tmp/pip-ephem-wheel-cache-k07pnqxa
2023-08-16T21:05:49,180 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-08-16T21:05:49,189 2 location(s) to search for versions of pyhmmer:
2023-08-16T21:05:49,189 * https://pypi.org/simple/pyhmmer/
2023-08-16T21:05:49,189 * https://www.piwheels.org/simple/pyhmmer/
2023-08-16T21:05:49,190 Fetching project page and analyzing links: https://pypi.org/simple/pyhmmer/
2023-08-16T21:05:49,191 Getting page https://pypi.org/simple/pyhmmer/
2023-08-16T21:05:49,195 Found index url https://pypi.org/simple/
2023-08-16T21:05:49,333 Fetched page https://pypi.org/simple/pyhmmer/ as application/vnd.pypi.simple.v1+json
2023-08-16T21:05:49,676   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/79/24/b9adc93653b83e3aa333588f8fe80cf6a058b97497a1a722e7a2cf5bc5b3/pyhmmer-0.1.0a1-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-08-16T21:05:49,676   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/41/5a/594c4415860394f14b94137e10f3b6264fbd452a9ed00371fef870bdd68e/pyhmmer-0.1.0a1-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-08-16T21:05:49,677   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2f/fe/4cf2fc8c5eb288fc72cbbc151d6da1b6f6e73fcba66842ed40532069902d/pyhmmer-0.1.0a1-cp36-cp36m-macosx_10_13_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-08-16T21:05:49,678   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/dd/c9/3f46d702c63e188539c28555af361e58ead4bff416799042c5ecf97805cb/pyhmmer-0.1.0a1-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-08-16T21:05:49,678   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/76/12/f5d1ef8114cc5e0ab890d562768e9a6eb253b3e3bf258f8105c1d1841c73/pyhmmer-0.1.0a1-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-08-16T21:05:49,679   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/b6/b92f44fcc712bc3dd621eccefe34d569a17f0ae73133f352a47fb2029c44/pyhmmer-0.1.0a1-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-08-16T21:05:49,679   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c1/b6/0ca49ee6803d761eefc93528e9e8106151e06acf77ba9f669275c01863ac/pyhmmer-0.1.0a1-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-08-16T21:05:49,680   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/be/0d/e2e21b3925af6887baf35a3e8993b5fe4863d93638138e7d5f236bcf2197/pyhmmer-0.1.0a1-cp38-cp38-macosx_10_13_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-08-16T21:05:49,680   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/56/3d/aac55b3f74ecd81ff3f619083c277ba40df45d8e6b8fc19d58eb74fab09b/pyhmmer-0.1.0a1-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-08-16T21:05:49,681   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/56/cc/11cb714fad98ed3c1689ce83a31a29d744ed34c822af3ae63b2450e6b159/pyhmmer-0.1.0a1-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-08-16T21:05:49,681   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c5/39/ca6e515c639a28632e52579a75aabe22d6bf2fe2a66cb2bd407fea81a1fe/pyhmmer-0.1.0a1-pp36-pypy3_72-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-08-16T21:05:49,682   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/92/21/bb677b42abb107adf96a8e305659779332f1faece8c3c8b8227d6c447714/pyhmmer-0.1.0a1-pp36-pypy3_72-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/)
2023-08-16T21:05:49,682   Found link https://files.pythonhosted.org/packages/9d/52/5dfdc7b0b49d72f6975c789255f785fb5adaed4d316dea2c1fd5752e3671/pyhmmer-0.1.0a1.tar.gz (from https://pypi.org/simple/pyhmmer/), version: 0.1.0a1
2023-08-16T21:05:49,683   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fb/5a/94c8ad40e16bd1b238703a8815bd68d90b0559ac8cbaa7a027d2a886978b/pyhmmer-0.1.0a2-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,684   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0d/a8/b31471655d0f09813748c9d8888587e3a1e1573f0c01c748676d03cc3c51/pyhmmer-0.1.0a2-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,684   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/da/1f/4b3aef73b2a9d4e07d56700a1a11794e6c92dd9018c1008b53e6c0e903ca/pyhmmer-0.1.0a2-cp36-cp36m-macosx_10_11_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,685   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cf/83/a386d9e2350ec96fe9d0c6d8c274c72afda82745e5586926966b0c8e678f/pyhmmer-0.1.0a2-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,685   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d0/24/aaa2a74692ac30b32f7da206479021eb206ea6e7dbb7023ad8bae97db1a4/pyhmmer-0.1.0a2-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,686   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5a/4a/d1cba5443443544a77b200f47f2ba3ab679ef974bbf51dbfefde401902f0/pyhmmer-0.1.0a2-cp37-cp37m-macosx_10_11_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,686   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d2/bf/a7d9c65a9c2660474ad72338ca47427f6f78e6ad378026edf2fdce3019f2/pyhmmer-0.1.0a2-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,687   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a8/f7/10d886b6e03cdf16a6123dc48687cf1aaa025ac2b17d902bce75d4785ea4/pyhmmer-0.1.0a2-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,687   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0c/54/8b3c37d0732fedc623776c24f703a10b069436039abc2cbbed14eff2d665/pyhmmer-0.1.0a2-cp38-cp38-macosx_10_11_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,688   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ef/4d/86ff1e09e523b7d38d5d88d507f4131d4e20348855bb73603693355baf99/pyhmmer-0.1.0a2-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,688   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/14/d7/a10594b0c3bac79e2526c5659789b38cd98675cf8bc600c7c386482f40ad/pyhmmer-0.1.0a2-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,689   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/92/f8/e76e388294f53736440bf078f3e6d407625ab53077c8da0a80c776aaf5de/pyhmmer-0.1.0a2-pp36-pypy3_72-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,690   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b0/94/945c8e50db0e658ccbda8abb26a0becd29e414bbfc9a2aa0a07329ac86b4/pyhmmer-0.1.0a2-pp36-pypy3_72-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,691   Found link https://files.pythonhosted.org/packages/a9/d8/7d1a3e189d29f5f57cfc2b5706e46d9c593228316d88d9791e4b6deaf818/pyhmmer-0.1.0a2.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5), version: 0.1.0a2
2023-08-16T21:05:49,692   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/67/dd/ffe938b4db1f8230060a11a725500da00678d2431552685541e49f56a1cd/pyhmmer-0.1.0a3-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,692   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/0e/8634c98e9bb007edb4d9b0504cd2325f0db0303124c2285405f422d48d60/pyhmmer-0.1.0a3-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,693   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ac/a6/5d0240be2817e6b3c876493903fdf300a05a4d27ab4ce3e71a86bb4e6e47/pyhmmer-0.1.0a3-cp36-cp36m-macosx_10_11_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,693   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/05/76e3a2a9e1a8d8f2cc41a56712b6f44d518d44e697d8cf4dd501540233bb/pyhmmer-0.1.0a3-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,694   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/0a/6f7079e3579f2729c0bd8d504f321336e981bb7e6d39cd17ec3077a5fff4/pyhmmer-0.1.0a3-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,694   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/82/43/7dd16f4ba5889baf5948f420bfb0333b10f00b247b7dc346eb1f564951e9/pyhmmer-0.1.0a3-cp37-cp37m-macosx_10_11_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,695   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/42/e3/1ae53fd316b2f4d952c9cc566068781a0e0bd676e741f328ae2c902d1490/pyhmmer-0.1.0a3-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,695   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/14/ee/8fa3f99cb062863c91e73654f21024373cae0187e5e3476275c1cf9d06f5/pyhmmer-0.1.0a3-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,696   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8c/67/4cb6f3ff89e47e060598f940d771799fdd7b1427544cd8da94ce895e9e4f/pyhmmer-0.1.0a3-cp38-cp38-macosx_10_11_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,696   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9a/61/e5f4b60a3ea29110b78672a95dac9bc165727c96732e34868f249e3422e1/pyhmmer-0.1.0a3-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,697   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/37/df/8c9ccb8baeec522b05e956beaf899596ada02a3b383dc7a8d259b69e825b/pyhmmer-0.1.0a3-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,697   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5f/78/7cd9016de0f1aa1ee2da0200224cb886959e62cb97c933553cdc7fd2560f/pyhmmer-0.1.0a3-pp36-pypy3_72-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,698   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/2a/abf43d38a2414b719e57bf5c5edb0803179f6d0e6a16fc2eed28cc77b6f5/pyhmmer-0.1.0a3-pp36-pypy3_72-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,699   Found link https://files.pythonhosted.org/packages/54/29/75df6ece9030041c44fff57220bf48950d4c653ddca7e02a54d4d5fc21cc/pyhmmer-0.1.0a3.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5), version: 0.1.0a3
2023-08-16T21:05:49,700   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/59/0b/15f39d875ef0cbadfd3b069916f632409989918429ec2604eec53cd7e448/pyhmmer-0.1.0a4-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,700   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/48/3c/336700ba033d737f5e839fd63e3f0aa4946a66870f7d54f3825ac34c1a95/pyhmmer-0.1.0a4-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,701   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e2/af/ed96bc98aa7c04aa0c1ecdc7bc2ff90a6fde3d4f323c23509e56a205d93d/pyhmmer-0.1.0a4-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,701   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/6e/4829b621577195c923ae8bf3efa95925bcb93478bee8938818043597c926/pyhmmer-0.1.0a4-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,702   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/67/90/3f2cc3b8d0d2400b4cb21655f124b1704f0b71b05a0680f6671b19ec566c/pyhmmer-0.1.0a4-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,702   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c2/da/bc625da5fac25a825470749a1a0465f15cceb4c702cb9efd8b69e76de5e7/pyhmmer-0.1.0a4-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,703   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4c/35/22c6cb71edfcb82ef9d649d3adb11574f1f1ec930491242295c3916e7572/pyhmmer-0.1.0a4-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,703   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a0/c7/3366cd7f01c8a50a9952c1d876141630de3d6b68d4bd2067b17b121921af/pyhmmer-0.1.0a4-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,704   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/96/ab/547d16b731200d26c3295f6ae6192d6d6115d613dd3787ea0f8978478bde/pyhmmer-0.1.0a4-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,704   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/73/e4/2e4a8bc0edf07188d51fcd3b1ff17cce3efa831f76e6e16b84df1cfd3cde/pyhmmer-0.1.0a4-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,705   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/64/14e6ba3b80de2a4bcbfff2f876cc9b04151570d88e91d5a6496052e33072/pyhmmer-0.1.0a4-pp36-pypy3_72-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,705   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1b/9a/288358a8964913e26cc5d10e5e5a4ec01b72a33d1072d8f4c1423d24e643/pyhmmer-0.1.0a4-pp36-pypy3_72-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,707   Found link https://files.pythonhosted.org/packages/b6/28/6bbe80cb3e3fcf41e368bd852dcbd88914534b2bae2722a958b8bd4accfb/pyhmmer-0.1.0a4.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5), version: 0.1.0a4
2023-08-16T21:05:49,708   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7c/2e/16c5e515adb33ef799f8c2c23cae30fd6d2377b8a18346d76fa562950802/pyhmmer-0.1.0a5-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,708   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b2/4b/344a727c4b058731e86e154a3ac32e84addf54025ca7f1e298c516af9d7a/pyhmmer-0.1.0a5-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,709   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c0/6b/9dea6c63fdde7edd651e63a7c6cd1d699580abe85feb2b39cefe81652384/pyhmmer-0.1.0a5-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,709   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/47/37/8204adf001f48891820aa517e3c663ab253b7a110d7bdd785599bd2d22cc/pyhmmer-0.1.0a5-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,710   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/bf/46/221353715215cd6b958d2642508dfbf3d953467e2a2021ee541c1dc504b6/pyhmmer-0.1.0a5-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,710   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2a/8b/ff13fec81f5f7bb25b028823f2263a8cd73c98b0ccbf19ddaba39d8b0b31/pyhmmer-0.1.0a5-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,711   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a5/e8/94f0c1cdc6a0de301e1d8e564c9815c85dde6d73cd3a136dac0c66326e18/pyhmmer-0.1.0a5-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,711   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/52/f5/68b11fb13bc986885528686ac0a97bd56b719130748cdc663e96c67c8c13/pyhmmer-0.1.0a5-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
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2023-08-16T21:05:49,714   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/42/bb/38717304f0071241dae861805cd3965a635716cd8e209f7a57846beb6bcb/pyhmmer-0.1.0-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,714   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ed/6f/c31e9586a2f3979939d86281bf3afd2169ebc1d0ae3bd8358a155e4daa3b/pyhmmer-0.1.0-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,715   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/76/3b/d47f0b6a7970a2d1650c565fc73b749b5644da7eb3b7b83ef8f249d10d62/pyhmmer-0.1.0-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,715   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1d/f7/b44cd4bf143a546fd20c6636a19c0bdf2e9604836b51ea071230303a3fa1/pyhmmer-0.1.0-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,716   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/24/70/60653871e1a86e792f3708889fc8acf748365f2244f8667f14c2cbd484a3/pyhmmer-0.1.0-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,716   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0e/15/193379df725ab6ff427b5b8a7318f03aff61a9cfadf125cbbf84a24c7b0f/pyhmmer-0.1.0-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,717   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/49/a6/91095e8a9dda7eb3837b166ceb9ceaccee36d4f1d526d070b246760a93f2/pyhmmer-0.1.0-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
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2023-08-16T21:05:49,719   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/30/5c/720bed5a56da8768db2b94f988b402071729ea2a51911e9dbe3dacb79616/pyhmmer-0.1.1-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,719   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/93/5c/a01a36b27d63ff25786813e31ab0f7ac63556657ed47f4afb8fb596b6163/pyhmmer-0.1.1-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,720   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/96/6b/e0f1612b0e9dc24ce8bc7dd876177d30bb4555b4b7b4db3d2ad328f22410/pyhmmer-0.1.1-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,720   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3a/0f/5ae8bcfad05dbf958c293ba0ce182cf2d235ce28b7c5f4b2bc6efb8e21ed/pyhmmer-0.1.1-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,721   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ea/45/25f87f17f71843f9f88e4110ffb70bf21a9d5b651408954fb1eeb007c63e/pyhmmer-0.1.1-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,721   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b1/e7/4569641df1bd13deb351ff6f720987beef4cdd33d8bcc7698dcd2e8a663b/pyhmmer-0.1.1-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,722   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d0/d0/8c86f6066c44cdb96c3903c2afdf995889d59928153648c9d5b914e8e229/pyhmmer-0.1.1-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,722   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/70/84/88b2f83c69d7e82340c1536321bdd89b504cf1dfc27c13808f477a9e293b/pyhmmer-0.1.1-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,723   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e9/36/cc246f60791deb84df93240ccdf05a2c2e83cca21b4ccb90d6d0fc83e105/pyhmmer-0.1.1-pp36-pypy3_72-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
2023-08-16T21:05:49,723   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/85/4d/1d8353402201354fc144524379cc8aaa212df90ac9b8172c56a189955797/pyhmmer-0.1.1-pp36-pypy3_72-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.5)
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2023-08-16T21:05:49,726   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/11/59/9256d8c340f272a37741c1df0213d54f762af188af7096ee64e3c10d8f49/pyhmmer-0.1.2-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,726   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/77/79/898e135c8e0fd163528e02b3be3c5e17d2ee6891d3cc267c0203315079bd/pyhmmer-0.1.2-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,727   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/80/8d/cdc97ad3ebb6510a15494d4ef7067f021d5e05b13e4044fa0b71be48624d/pyhmmer-0.1.2-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,727   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2b/06/a78f0a5591fe51e6d2504b7e994192789d3e314c616639ba822384e3feed/pyhmmer-0.1.2-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,728   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/40/04/4bdeb1d809ab83f5675c9c9ff0916cec214a8f948963c647af005f6bd38b/pyhmmer-0.1.2-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,728   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0f/8a/0031d0591da9f548894a9c642eea2093a5126607c172653f95b1a9f4e87f/pyhmmer-0.1.2-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,729   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/96/a4/6993b2c3f5fbeca7eae8db5be6d295cbda155f167446b39124e6b86d8188/pyhmmer-0.1.2-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-08-16T21:05:49,731   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f7/77/0cbc6ba802cab4183a570475534c757dc3536087f9bb65f7a8fd9adbcf4c/pyhmmer-0.1.3-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,731   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2f/21/f253516aa545b4193e7bd0dab8f6aa55f86b8fc42396d99657a29736afb8/pyhmmer-0.1.3-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,732   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/72/b8/58df5772a4bae75d1b445a3ad76677052e978e01eb6875e4bf5301569c7d/pyhmmer-0.1.3-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,733   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3e/18/14b6060d8720a8ec994194d192b3a096cdd78143b4ceb2653b3db9f10ff8/pyhmmer-0.1.3-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,733   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/29/5d/6146c56d880f5dedc33e7915fd0604c2035ad2c5b7ce223c1e80dadfa0c8/pyhmmer-0.1.3-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,734   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/ae/ee5c4e58fddd636f50b6b3f35bde31d22f3e298afeb8145c1718f5f85759/pyhmmer-0.1.3-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,734   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a6/f5/eb764e91a08471b7c986502a033f49e5d582b1a88508e0191d6a5761fbc5/pyhmmer-0.1.3-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-08-16T21:05:49,737   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a2/a3/379fa5cec24f38e8809809e1c68fd9e533a38ecde0754033b5032ca6b1d1/pyhmmer-0.1.4-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-08-16T21:05:49,738   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5b/e4/027df8f7a117f915ef46f05745ecf2a48d25310fa43062d5541049afbf97/pyhmmer-0.1.4-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,739   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/23/9e/c183f502d8e642e21cab71861711ed41785bf71dc5a3cb9138c6d564725a/pyhmmer-0.1.4-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,739   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/54/ee/d73473e9bcb58e6d06d72a90dd2637dd6278f7a9e024166a3b938b5092d7/pyhmmer-0.1.4-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-08-16T21:05:49,741   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ac/9d/cab7a2348a033dedc8862ba4d5a69c351447b783b6ea813a23134be01538/pyhmmer-0.1.4-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-08-16T21:05:49,749   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d0/a6/a707ffe2588d16487a86e29e02aebfbabca7ab7f6d634026df955ef5259f/pyhmmer-0.2.0-pp37-pypy37_pp73-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-08-16T21:05:49,752   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/91/43/c2a90dd0e06d7dc09d952d80410751b02282b4ca4280fde3bde442795ce0/pyhmmer-0.2.1-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,753   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/49/7c/d3f741a6021ad34a0330c4b025dcc5b6a149e453d19b1a6955e1a6840e69/pyhmmer-0.2.1-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,753   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ee/08/6e9cd70c963df09e626a0aa4ca3e0db88cf06aac837521fdaf4105f2a4cc/pyhmmer-0.2.1-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-08-16T21:05:49,754   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c5/33/388b9ab97e2e203b771ee35c840220aea998d326bf0101e00769101253bc/pyhmmer-0.2.1-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,755   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c6/4a/1f95ca9c7f09f3a37c25e1096431c711f250902c2d4755d7bc3cf0ae200c/pyhmmer-0.2.1-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,755   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/86/4e/019bdee89691d26bb66acba19b354cf88270396db6000362069b0d2f86b8/pyhmmer-0.2.1-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,756   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/df/dc/45bc67bc9ceb8280a62259d1c018e64bc188d006b61d0ec44ae61cb7e704/pyhmmer-0.2.1-pp36-pypy36_pp73-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,756   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/79/77/b6513032ae50e0d846b77e459e093cd829ffa46d61e6e9f8e0c93fd53f61/pyhmmer-0.2.1-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,757   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/bc/60/ff3221b612563f41a1ed356c5de3769ea1e3085bd121c685c945fcc0a7aa/pyhmmer-0.2.1-pp37-pypy37_pp73-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,757   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9a/62/b11a93e7c6caf67167ae17994708f78fccd1d09595b6091f4bf7d1ab757f/pyhmmer-0.2.1-pp37-pypy37_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-08-16T21:05:49,760   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/05/4d/78e075fe013811b9ed0844c897829de3794379b81fea4c3c325e044d0b20/pyhmmer-0.2.2-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,760   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4d/88/9e436fe20ef2f5fd96885fbd7938606634cb979f06ce61a3b3be25cc4788/pyhmmer-0.2.2-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-08-16T21:05:49,775   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/72/56/bd664da15d6eff0e57163598b18bcb66db853fbb80da61d41a74ddba33fb/pyhmmer-0.3.0-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,776   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b4/ab/0d6313332333d9104d39748c1fbdbb312fd3a3cc9f871b4f7bbea4dc5eb8/pyhmmer-0.3.0-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,776   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/59/6f/1bb9034ca6c811c37dcf4eb0f9304e4d575cd4855be7da0c51cad30c117d/pyhmmer-0.3.0-pp36-pypy36_pp73-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,777   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1a/84/801ca5f828500d3825b066c8006d6b501d67d57d43f1c8d95c62fb72ed21/pyhmmer-0.3.0-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,777   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/40/bd/c936e6aaa290135fadb7a240036567ea730c38646692ed5a161094168db7/pyhmmer-0.3.0-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,778   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/91/23/486eb994a82339f2dd5e15f734dfe622c7767d41b77b48dc638cc06192be/pyhmmer-0.3.0-pp37-pypy37_pp73-manylinux1_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,778   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/e9/35bc8f987689ae229a69375d849818e3e444970e5c0a506c2ae4a9b67b37/pyhmmer-0.3.0-pp37-pypy37_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,779   Found link https://files.pythonhosted.org/packages/30/13/7489e047ac14f57c8b24a4ae33feebb37a07b8c419bbd4fba9f6d4e701a6/pyhmmer-0.3.0.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.3.0
2023-08-16T21:05:49,780   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1b/fc/a6dcd6a8fd03829823c055a2ac2ee97c7d295f755d7ffcb5a1a9f8590396/pyhmmer-0.3.1-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,781   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/ba/3bcc8eddba05cf995bb5a718f904e08875159d430687c8a65f3cdcf1ea24/pyhmmer-0.3.1-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,781   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ce/5b/b92aa85314f24f4a19f66f18cfa3c6f3807594d7c3a23a8bfb5cfd92c282/pyhmmer-0.3.1-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,782   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5b/ec/8fc61155ad090117ec91574677ffe7be2540b8ac1eda05aac39b04b2baf7/pyhmmer-0.3.1-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,782   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6f/af/d847ec7dced017b36394aa1f1b1322f561b68831d0c82c5ed4198c10b4c6/pyhmmer-0.3.1-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,783   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b6/2f/ed4c88a0ff74bce8781ecc75dd6d34d6d6c4f7dbb6f8fc7538812fb1bcb8/pyhmmer-0.3.1-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,783   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/74/ba/2071d1002491f10b45fe057f8707b7f879546443a18ed0acb9a9486d3033/pyhmmer-0.3.1-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,784   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e3/1c/ac254f0a00b9739d4587df65f030cd15783f57feb996470cd4664e24e8b2/pyhmmer-0.3.1-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,784   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8d/fb/d87f9c26a4b58ea330e7936c4f59f0d8ecfdbc1e76aed60eaf5dd29f04ba/pyhmmer-0.3.1-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,785   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/57/15/82f4a4b0da12cdf0d044b6624cefa7cf563a60666a81196050b9f098df71/pyhmmer-0.3.1-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,785   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f9/c6/3990e6ea23334f641730885bcdd1a2f304a2149d9f4f6f64654de88a4693/pyhmmer-0.3.1-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,786   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e3/8e/9bb0b9dc14993637bf411158a8a74498ab297d9207b27163b88025846d10/pyhmmer-0.3.1-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,787   Found link https://files.pythonhosted.org/packages/9b/00/3a84465ed08c531aa7fafc575f16840c94a75bba9ab4cd2b46e906f0431e/pyhmmer-0.3.1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.3.1
2023-08-16T21:05:49,788   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/41/19/9d179de61801cf015e36b58915320bc456482b86001c9e5de25cf56f7e69/pyhmmer-0.4.0-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,788   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0f/05/7fb226eb9c2131dd60bd56f0077e006a4e51da51272d92163b62ca4f8eea/pyhmmer-0.4.0-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,789   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b8/47/dab7312b5280c80fbac69470200fbbae5056dfb4db0fa460d4624f8530ab/pyhmmer-0.4.0-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,789   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/11/8a/0383377b9fde608c63c61bcde44cb8ea0c43b24c2b719bd2292201e08d6b/pyhmmer-0.4.0-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,790   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/4c/1d63e605113d666e52d17d7e73201b3313640577f5bef5207a6bab7b06df/pyhmmer-0.4.0-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,790   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/83/55/929caad4036f3d97abd41694b19b773313afa4fe6bece2619bcd6cf81917/pyhmmer-0.4.0-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,791   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e4/3a/f544d871dbcf4c96751941cce04f2d877ea48505e5af223dc40f723c442c/pyhmmer-0.4.0-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,791   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2e/bd/9858bf2ec674d3a6470534bc5146583b7f4667c337fd0c73292d0d1aa6c3/pyhmmer-0.4.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,792   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2b/f6/64fc4c3df308f1d50c90469090967e8d5acfb55a9c4bea7bcbeca33aa95e/pyhmmer-0.4.0-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,792   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9f/f8/5d58d4f3f80c970010aea222b958c3f2e04a970c0573aa675fa805394f5a/pyhmmer-0.4.0-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,793   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5f/f9/99d353372602557b78b6aa0ca04ae84b09cf38e1ae17a8458efc9167c571/pyhmmer-0.4.0-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,793   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4a/3d/aa40c222382ac833fdfa24f9bc443dd5bfc0e0ec44ad401a6df701beb555/pyhmmer-0.4.0-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-08-16T21:05:49,795   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2a/f4/575177c27da35c5052bc8cfc63454f7af5b948e89f3d9350cb061c3fd679/pyhmmer-0.4.1-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,796   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/30/5f/cc29c5de73f9915649ae84abdd07e3e6a6d4890566c50d9fa5417ec42b74/pyhmmer-0.4.1-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,796   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a0/95/daff94eb7d138478fd562ae5fc3908524b8ab775f978898d2b821487f012/pyhmmer-0.4.1-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,797   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c1/dd/848a2b619aee86995c19fb0f26953c7b7cbe3d7a54a1cf0f55cd430dc735/pyhmmer-0.4.1-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,797   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/92/ec/5b615c54a384170b2ed09278a3a808a603d7be5c293d1e9ac82efd9ed245/pyhmmer-0.4.1-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,798   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/02/a8/8b04beee17f5087bd7c178fa5e1cb4ee877755dd1b0511206b6632548c29/pyhmmer-0.4.1-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,798   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/91/08/fde1653784e16bccae316a78694011f0cf56fe74706825db29840d06e087/pyhmmer-0.4.1-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,799   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/bd/08e876d81d61cd14279d7cc453060e38df9c59282b389c2789bd7742813b/pyhmmer-0.4.1-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,799   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/84/f5/5f83239790be66db9ea89781295020172d20ccc6d1262f4064dc2c1170cb/pyhmmer-0.4.1-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,800   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/35/55/bd514b80616381411b763ae1a275d384bb2261abc06f8b32e95dedf7aa37/pyhmmer-0.4.1-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,800   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/09/c5/f6909bd330534d7afba8a9a3c4618ec0bc31510ed253d98d18b38d886120/pyhmmer-0.4.1-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,801   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/94/8c/cdb2dc2c6e4427ad1c2e0f0a2975d909444e0d7774d45a09df331f5bef53/pyhmmer-0.4.1-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-08-16T21:05:49,803   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ba/48/a36c888751b3dd9eb63c3c1c5ed163a6d154ae00f77d18a044e3fac082d0/pyhmmer-0.4.2-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,803   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c3/5a/8a0de4d3424898a336c5c6c1d9d1de7cc9e09ec0ce0936b04e309c71b66f/pyhmmer-0.4.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,804   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cb/12/1567eade5703ae7153f55256d5f0a404a77a5d40b286e7a20379f5d96d60/pyhmmer-0.4.2-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,804   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8a/aa/09b2d512f1b75ed279317eba38e320204f0cfa49094f83211aede16286ce/pyhmmer-0.4.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,805   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d6/21/3a09a81de850eb81ab720eb05bb1d1362070b1cbbc6a6b7b1edf701920d4/pyhmmer-0.4.2-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,805   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/29/43/19411901fe99dd7038ebb98fabd2b79062b2944bec551d0b06bd9909adc4/pyhmmer-0.4.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,806   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/15/c9/ffa040555c4ae3673221436506c8c272c22a53bd9e6a54efe0157d9c2972/pyhmmer-0.4.2-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,806   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cb/06/a2fc008cfdd553285325cf8373f3b6af85bb7cac0e294f45948bf1f282aa/pyhmmer-0.4.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,807   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/05/dc/0ed9ba672cc508bc15b4faf62a6444434e824ded77cfaf60662d90cb9601/pyhmmer-0.4.2-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,807   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9c/5e/212fe49995ccad358150012abf2da8ffbc25f024436b6fdcc89173e95b32/pyhmmer-0.4.2-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,808   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/53/9e/486d5da6d404842d00eabfbb1d7a25ffc0c49503dd7d267f1a6a701840e5/pyhmmer-0.4.2-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,808   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/68/88/b8bb0c20875f4638bb7d600c4c3dc65eb742b3a9833c730aa4915e94aa9a/pyhmmer-0.4.2-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,809   Found link https://files.pythonhosted.org/packages/2f/93/fa15885ede25f87ac2fa5e2cef12831bb8747b7e8455982ca2942ba61c7b/pyhmmer-0.4.2.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.2
2023-08-16T21:05:49,810   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d9/da/5e42fc076686aab8588bafb9d3e5c97a6c8bb4b24060eb943836c303cf11/pyhmmer-0.4.3-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,811   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c9/50/caff34277134400d58687859f224f34e88a6aa7abc6b3371150c3997f7a1/pyhmmer-0.4.3-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,811   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c6/43/726fc37dd0ece9c81780c9e29b90be4493693f4c6e8edde68b3cf8189125/pyhmmer-0.4.3-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,812   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/bf/5f/6a88535a37b4de01584d62e008fb415adbe3f1440950dabba648943aa3c1/pyhmmer-0.4.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,812   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b5/6c/ec2ff99e8dc22520805ecf43ff22369a1ca0228cbd6fabfc3de0d7695481/pyhmmer-0.4.3-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,813   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f6/9a/8df126ab5ccf2278e9b3414c26f53bf01b480164abcc11c9d2d56d9f67f4/pyhmmer-0.4.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,813   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2d/63/9e0ac76ca6baae6f288983a7af56de078773b5c0d61004419d1319197f61/pyhmmer-0.4.3-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,814   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c2/30/05d945cce1855035b4bb78996bac7ce0e371e2dc82b186147e36d551e1d0/pyhmmer-0.4.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,814   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/94/cacfb35c7ee944e9b9dac2ba8ef20cc192958cdbf1e4e223783152251a7b/pyhmmer-0.4.3-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,815   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ff/ba/e2347228e6bc83d22820f46bf33ed8558ce1128a60128edd2b9bd770078e/pyhmmer-0.4.3-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,815   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c5/9a/d5447b14a91a994bd2ec38a1a4880c29c93bce74e1aa7a328a794901a870/pyhmmer-0.4.3-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,816   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/eb/87/8074c4e8896b87ef161b2490f525315f70c4783e567cfc15679bdab1f059/pyhmmer-0.4.3-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,817   Found link https://files.pythonhosted.org/packages/4f/77/3499166ca2e4ca1b8736bebd9082787c5bb88478c98fe14970e88cdecf07/pyhmmer-0.4.3.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.3
2023-08-16T21:05:49,818   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6a/9b/b6aa00ca89a0f7a238d2f23a241416e7051d7ba24fe7505d1ec33c7a21e5/pyhmmer-0.4.4-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,818   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e0/6c/20245a7c295a2eca32fe7db3dec34c0c581c6c2ed0ce926cafe318eb2259/pyhmmer-0.4.4-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,819   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/07/f0/066382b4d9e67ee4df32b0ea99a0d499739b31375505b28d87efbef0d7ce/pyhmmer-0.4.4-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,819   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ba/aa/2be9a4c359b3cde19a49800e85813b5f18f1116c5f7fb828f12f2b3d6102/pyhmmer-0.4.4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,820   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6e/c7/d1adec561776afaf05b52a9316b4cf7922497052c82042d4c7ec790c7c96/pyhmmer-0.4.4-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,820   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b9/b0/666d105f9f9ab1881952962ae9e84beb7f4537b00deed7fda9b8ec268715/pyhmmer-0.4.4-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,821   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/82/a1/4daf57b4a7e354dfb8ce1a4083926a7383e056d295fad8a1cfbf53a2ad0a/pyhmmer-0.4.4-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,821   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ee/db/b387ccecb8c04aa6caa5d8ba9e2554d3e2c4e2b098b42d17c4f9369d572c/pyhmmer-0.4.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,822   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6f/02/c2ac022076a9b264f91a0f7e6b08a89934d5e1435943cb8b39304cdb7447/pyhmmer-0.4.4-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,822   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e9/d1/2c4a7021f650815ccddea11adf8506dba8590d6f1e1a82050766b963fe5e/pyhmmer-0.4.4-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,823   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/91/78/eefaf55976164ad3550c2f76c6e9c732d79b7c68e1abbbfa98646d756a86/pyhmmer-0.4.4-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,823   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/08/8f9539ba0d0e00aa7cdd16db85ffd3ee0716b515167d95efe68b11c0f583/pyhmmer-0.4.4-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,824   Found link https://files.pythonhosted.org/packages/59/cf/064c29541b6805d8ef36046f2b0764c4ba246e887a2e263226359bc2776f/pyhmmer-0.4.4.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.4
2023-08-16T21:05:49,825   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b7/ad/76b4338792226f636651db9e66611a539847463a0f2265a571a24487fafa/pyhmmer-0.4.5-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,826   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/36/11/9211817ba7eb6aa848578017977e3ea4d42a5f2ba76a5a2c0c71d5984d6a/pyhmmer-0.4.5-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,826   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/47/a6/ee5ca7c4a3dcf82cf0f0dd5418c9fddad82149867352332d1feed8528cec/pyhmmer-0.4.5-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,827   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8e/ab/aaf80ebbba238a42a3f37e794ee56fad608ef5c5880dc5701d044d5720fb/pyhmmer-0.4.5-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,827   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c0/ff/75b42f302eaf3eae6f87dae0023a54f5bb0c869613ce730bbb064afe57d8/pyhmmer-0.4.5-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,828   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8a/3c/c22f961311a96364b2fc84ebcd25ee75ce9111f27c9eaf48c1faeeafe8c7/pyhmmer-0.4.5-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,828   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e5/94/33f25a0d8f7761ac55acd5839c50078efe810b1e1ae0006113ca92c58d90/pyhmmer-0.4.5-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,829   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/db/a3/c5f8dd1e931959d9c38df19fc937c6cf8568174e30ea2c2a86849cbd4b01/pyhmmer-0.4.5-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,829   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1e/36/0407821105d77948e7d703ee4aeacd2cead5cf317179db06508f7cdf7ce3/pyhmmer-0.4.5-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,830   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/11/86/9beee426a65a90eca53de4f3b0116b562bcbcf6eadf403ec83ae1b312a13/pyhmmer-0.4.5-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,830   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3b/2d/e2a6dddd83bb0e389b0fc62449badff092ac664046c82ed718b5102b08f4/pyhmmer-0.4.5-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,831   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/9e/c179587a659325aa519390efba2fe7775178a111888fe32ba0978fd91205/pyhmmer-0.4.5-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-08-16T21:05:49,833   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c1/af/85534ee68bcdcb07d92d7630536659edaf435f0e7f8784189c53af637228/pyhmmer-0.4.6-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,833   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/03/d3/691d493cfc4d37f8f099ec52179d86fffaed4c9e3a6b9d76f6a3b5cf0e27/pyhmmer-0.4.6-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,834   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c5/f0/343198b3cebda51800efd71bc6001f5754a69c364da0f5571a5c4e91965d/pyhmmer-0.4.6-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,834   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ed/2e/efbfaaabf781ffd21b425c7cbe4dca8215c22388213aeec10b953c320cc3/pyhmmer-0.4.6-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,835   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6e/bc/1a349bbc9da921811a3c5f385dcb25819223672145a033539eb8acfa762e/pyhmmer-0.4.6-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,835   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/b6/432a099063555660c698ddf22c27a9f0e253ea7bf0b357dbcf9deb53f552/pyhmmer-0.4.6-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,836   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/61/57/9941d06a569a34685928406e5b5d47819417a2379a26233437ca53a3484e/pyhmmer-0.4.6-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,836   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3f/87/171796b7139a8a44ba960344487f474d65bb5f16c21a088bede3d3cdec33/pyhmmer-0.4.6-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,837   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d0/b0/5d0f1b002f50fc531485e8691224de277d329d293bde922a35f4659e73b8/pyhmmer-0.4.6-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,837   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5e/44/cc860850904897b27fcb884a05986159a1ea08e238150aedba27f5c2a8ab/pyhmmer-0.4.6-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,838   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ce/14/ced57dff0f434c8fe2d84ed1f74b33d0dcc8b8dfd3b3a9ae9aa59f3d601f/pyhmmer-0.4.6-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,838   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/41/80/ef4da6ee20a7937f2a3e3c58bf45519a91890feda2461bc18f353ce70fee/pyhmmer-0.4.6-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,840   Found link https://files.pythonhosted.org/packages/bd/5f/6e0db077ed2e1073b9fe7c4b18df5774bb86c2aa27f191713cd3f3aab53c/pyhmmer-0.4.6.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.6
2023-08-16T21:05:49,840   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/26/20/dc39dffff630017b87930177ac6c5e7d8621d57feca523d60c631609cb49/pyhmmer-0.4.7-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,841   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fa/f4/eccba2715b5b099cee52cddda59b3e5f8344071045f7c0c4567d3a3e32d7/pyhmmer-0.4.7-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,841   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f6/fc/d9b9efcc7b21381a3fa0c4b83e083c9d0b406868846054b989d105c301c8/pyhmmer-0.4.7-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,842   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d8/6f/d70ebea12581688dbcf180b983186e3d3a8ad2325cc8691c837276bb3e67/pyhmmer-0.4.7-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,842   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/35/0c72fb32b8c75526ca61e74b835254a36a377ca9f7d53f33c607f7fb27a6/pyhmmer-0.4.7-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,843   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a0/c1/9f98c0bc9356578c3c4b14fd45a738acae7f7940a8ddc8342a8632734a3f/pyhmmer-0.4.7-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,843   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2e/1a/9605d23785ef8dbed1109f79c3797d2e417bda20e9207a4c8156609c808c/pyhmmer-0.4.7-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,844   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/28/1373677589c6dff86a9c29c5340ce8f17fea4163530ad63d8c2a4a54141f/pyhmmer-0.4.7-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,844   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/20/89/62ec67b2d2c1b17a61c6ac8458eb95c31f28da3c69920fece52325ce6a6f/pyhmmer-0.4.7-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,845   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/bd/1e/dedaa65e0af9d9e0e2e3524fed5730187f0241d75ae14a30c537aa0b06fc/pyhmmer-0.4.7-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,845   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ed/45/d5bc13839408fcd2026afeef68619db2ea343d3a9add651214c37fde69b4/pyhmmer-0.4.7-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,846   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d9/04/036c8ea00e8388dba6b116f4914df1065d7856f786d5c6458a1bd1ec6576/pyhmmer-0.4.7-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,847   Found link https://files.pythonhosted.org/packages/f1/eb/1328eb9c4ca58a684b9b210a51636a5294e6f6019675b0181c8a9c567ea3/pyhmmer-0.4.7.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.7
2023-08-16T21:05:49,848   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/53/60/97c5cfc22bf1d26475087e45455641599ca1e2910e670d9c72604508aee2/pyhmmer-0.4.8-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,848   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5c/35/02845b5af76b67f8a7d0703f049793aba99d5323cc05851c7dfd32e59145/pyhmmer-0.4.8-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,849   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d2/5d/bd3895ebf5d0c21e5576e046cb295b3832174b93cdd7affa2c965eb72002/pyhmmer-0.4.8-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,849   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/2f/2ffaf5d537ff04d90b69c779d2e4d060630f29b25fbedb95a76e6a0ca195/pyhmmer-0.4.8-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,850   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/87/e9/d607ccdc5e57e8bfdaf1eec1fe51bd434eb57fe61fb80d60236519ee4162/pyhmmer-0.4.8-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,850   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/29/de/6af96c7b795c643e27fdb6518e64c74b7c1c6cdb7624e15c040bce58f9d6/pyhmmer-0.4.8-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,851   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/62/ec/918058530f70ad9b58ec9dc1638115362f59cfb9f5ad584732fe290b8dbb/pyhmmer-0.4.8-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,851   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5b/42/4a8ec9fdb0e57cddff194646e62360e73f6a57a3d339095df6572af0f935/pyhmmer-0.4.8-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,852   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/68/8c577f9574bed3ac3017a76bf487b76b80c784163a9ddf15e14db3a84adc/pyhmmer-0.4.8-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,852   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/57/b2ed0c64308941872e2535eceeafb737b4871e507d54b5d68b6ffc02f8cd/pyhmmer-0.4.8-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,853   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/40/22/099da301d77a3f512bde56a54fa5272e937818843f8be96aa46089071f4f/pyhmmer-0.4.8-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,853   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/be/76/477e37aee671104bb5d1022eb0ff641ce700d639a36961694ba9710af8b9/pyhmmer-0.4.8-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,855   Found link https://files.pythonhosted.org/packages/5a/91/1166980fd7eb5106ef2f34ede5ae0043daf2f276f05b0e9f93cc2d968827/pyhmmer-0.4.8.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.8
2023-08-16T21:05:49,855   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e1/97/4247b2ab3b52d8ab9d4fda6619c93d428c4e364ebea041e93b7236ade4a6/pyhmmer-0.4.9-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,856   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0d/7e/b349dc728eb72f78b0ac0b1cc9a7530000740584fcebadda7b93d0f13a0d/pyhmmer-0.4.9-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,856   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/50/0d/6a818b85e852443ac1fa4ede30e18d5d4a4b3c04616f84a48f5cb5d2f664/pyhmmer-0.4.9-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,857   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9a/07/442980e0fc7b4d336157fd80d843b3ad0b71709087b0daf910f2beee93cd/pyhmmer-0.4.9-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,857   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1a/41/f5b4ffcedcf3116573ff5740de4877723f0d69b7527ece4a794069de2235/pyhmmer-0.4.9-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,858   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/78/a6/d21ba62d70e38f7b3829c69be9179cea416599a8ee952c8f4ac5503bfd04/pyhmmer-0.4.9-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,858   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/49/53/6428ce4322f6af35747f3f7c3829ebaeb05bab2eae6d5ff39c46cb1455e2/pyhmmer-0.4.9-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,859   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/00/b0/8daba4b0c9507fac1725a9005e88e8560b66e15d1d29a422980ae2caf987/pyhmmer-0.4.9-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,859   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/de/1d/76c728871c542de627e56683ecd2768bad8019744f575bdfe037fbf7889a/pyhmmer-0.4.9-pp36-pypy36_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,860   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/dc/c9/cf8188802659d5a599e884c8f9329498069ed3eb8bbe8f9de0152f825dac/pyhmmer-0.4.9-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,860   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c5/ab/362d371895cdd48c56963d052e8540b1d1c2261bf7dcd0acced3c6f1b10e/pyhmmer-0.4.9-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,861   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d7/44/e509d304b066af1563b6fd16c3535edd2c556f2f2ae9d8d3a00b85a7550b/pyhmmer-0.4.9-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-08-16T21:05:49,863   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b7/6b/41a4a5002c8f5b4ad25080ea07631927aee72b11b316652528f856281f9d/pyhmmer-0.4.10-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,863   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/68/b0/e5f3122d4d7a7e8688f726e8ed313982cac77c095554f1cce97ee5fba6d8/pyhmmer-0.4.10-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,864   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7f/ac/2db59c94139155e1241fabf650a8f30b238a68d13ca40014a75aece65b74/pyhmmer-0.4.10-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,864   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/06/ad/aaeafd77e0037312873a136a3c2165a5eab10ae37f56cb60b8c6de7442b4/pyhmmer-0.4.10-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,865   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/05/87/24601e2b81fedba09b3a003fd1e4fe78c8cd252767663acd9dbc63d1784d/pyhmmer-0.4.10-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,865   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cd/6e/9ab04139587efaeeceefb0a5e10178b14c61abdf67a854fc0430b6c8af80/pyhmmer-0.4.10-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,866   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0d/63/e4a944ac648642739f5dd85127803e47939202e025e0a9ca9fccc100eba1/pyhmmer-0.4.10-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,866   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9d/b8/b5c116cef579c924383e595072bfea9c24a894ef916eaecb139cf3e274dc/pyhmmer-0.4.10-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,867   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/33/90/566f66a4ca8bbba8d364b5d123399c5ca76ea8050d829a397d65eabaf3ed/pyhmmer-0.4.10-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,867   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9d/46/ae84e7ae14e9b3e8026b796471844959fbb6f4043c1af329dee1e9f702c5/pyhmmer-0.4.10-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,868   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f1/6d/ef6e6e92eb4925da759c64c881ff811f5ea4073b826b2466fe08a4ef1698/pyhmmer-0.4.10-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,869   Found link https://files.pythonhosted.org/packages/41/d9/e68b956d0a82e66223ad23fd46e15bcfe535809fe2c7fe38dc4f324c066c/pyhmmer-0.4.10.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.10
2023-08-16T21:05:49,870   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/70/75/a01b9274d74aa22fb3d4e4df3677f9e0fd8d6d96aac7918af9e532feabb9/pyhmmer-0.4.11-cp310-cp310-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,870   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4a/fc/4919fc4e0f15c48c060ef04908af7e4576aff4a5aef06a7fe8876496716e/pyhmmer-0.4.11-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,871   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/76/76/0ae3492a40179ac43d453b37b8a3d19bd58c3ca762013eca94aeb9592873/pyhmmer-0.4.11-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,871   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b4/dd/1f02cbf6cda0a82564cab00b63fba1904fc98be1db7c09e8eb2084b322d6/pyhmmer-0.4.11-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,872   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c0/3d/c2ca1d16803049f2917027ff4b05dc7b635757829f9c7288114edd73516a/pyhmmer-0.4.11-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,872   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/62/30/178be3d6c5dffe69cf886beff8302927e15d5ae2b92e9cef7f2f3fd0f43b/pyhmmer-0.4.11-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,873   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/63/9b/dc1fc0f379310382669aad49b6281cf3703f46662fc8d968b0b9ca0d7e8c/pyhmmer-0.4.11-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,873   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5c/54/4cba0bf00660fb32bc4e76006a76b20eaa4f694f49f37994995c6b0a4e1e/pyhmmer-0.4.11-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,874   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f9/71/f2d8518120e117fdb842d13e7714678c40692bf60bce01e54c883625a1f1/pyhmmer-0.4.11-cp39-cp39-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,874   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a3/91/02307afd6d26f1423cfd8f46dd4b070a7e4c84ad6d00524e5f86f22e5fab/pyhmmer-0.4.11-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,875   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a0/87/c0e6ce633d6649cae526c23260219fb911e2c3da891eb2485a5b6b8e6cb7/pyhmmer-0.4.11-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,875   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/61/d7/a415042ae43b7a13fbcd1a3295a8b8189029e7baeede92ab82ce597db36e/pyhmmer-0.4.11-pp37-pypy37_pp73-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,876   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9f/5f/1fd5587437c9e6331fe7a1d85d11d1e7d71fd21e068d1f0800c30bd2d0ec/pyhmmer-0.4.11-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,877   Found link https://files.pythonhosted.org/packages/65/f3/1de70443d58ccf843aaaa01393d640452e26b60912c0998302a0b8fea021/pyhmmer-0.4.11.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.4.11
2023-08-16T21:05:49,878   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/90/24/136abcb4ad189a00cb41409d3887d892a8764231aa863c0e9d181952c989/pyhmmer-0.5.0-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,878   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/97/5a/9983f2ef20d457d0065c12d96103c9ff25581089fc29478f2d387ede8007/pyhmmer-0.5.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,879   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/18/55/361aa005346f7810a9d2daf9a25eb8bc4cc5352bd8ff0cb9e25caee1c3f4/pyhmmer-0.5.0-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,879   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/ab/d4ac37a66e6344b641cc4f5bf6a99f55a9a4f1424a63a214a7862086628e/pyhmmer-0.5.0-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,880   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/27/57/1488737434a2bb61340ad3c0fc732fedef52718dca20931ed2617e66bd07/pyhmmer-0.5.0-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,880   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d3/d4/231efd3e3d8130f57875939fa9cb21160b8edc51f1749eb989673c9921b4/pyhmmer-0.5.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,881   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/1c/5118252d96ee71ccad56ad081fcff29e7af31ea85b9e94b97911df3db5e3/pyhmmer-0.5.0-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,881   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b3/e2/9bdf705fc5813f94d82ab2dc71ee9f07724caa43629235a845bc6120b5cc/pyhmmer-0.5.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,882   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/76/20/0926ec071a4373f167f1c3265c1fe4d2ace1d71e85e6b37bd8a66dd31925/pyhmmer-0.5.0-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,882   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d1/ab/7448d935505b12a4a865f273b51c5e6a63ebacc6d3e98acb23b2133c1c8c/pyhmmer-0.5.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,883   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fb/15/f3b826ba98bfbc9386e628d9b6fa5237a0e761274a1e84a6e1042fa55784/pyhmmer-0.5.0-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,883   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/66/e6/77a0ac512c431181dcb2ea9d41912a09518dd4514689bcf035a31576e479/pyhmmer-0.5.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,884   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f6/53/3e5af9674d0cb1bbe737f2253f9ade02ccb8d84835568e6d76c2de00e3e1/pyhmmer-0.5.0-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,884   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b7/8e/3030e8640238fe995a33b34bbcf073e3c37859cb8cddab5badde1c9f698d/pyhmmer-0.5.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,885   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f7/37/f35d1b12f6758bcee4c013957c23e7719e1db5795f37bf64e4367b9992b8/pyhmmer-0.5.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
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2023-08-16T21:05:49,887   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/83/81/e44ca051aa0c14b3d371da0e11c53b8c97915c587a4d2d8958b761bca739/pyhmmer-0.6.0-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,888   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/60/24/ff258c00e8a3d8f9d0f3a34f32f3405bee99ef0339a6fc4d529b6970cc49/pyhmmer-0.6.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,888   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/98/b4/4fb7c0d1956678b92ba1deac8e1f26fe6391e362a88aac7a1c6743fa85e2/pyhmmer-0.6.0-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,889   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/aa/cb/e9b4113ab1049e1f13828043ee41dec823111fa0d1ba95b8ed17aa2479da/pyhmmer-0.6.0-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,889   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e2/16/950a9891b018accdc4cf2eac23cd4b2cc64eced8b6774a206ac9bdcfe79f/pyhmmer-0.6.0-cp37-cp37m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,889   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c6/37/9e560cd8eb371df3b31e9e60b9503b51155607f8ca1948cb4009a0c47519/pyhmmer-0.6.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,890   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b0/85/ec2e8f9b2eb9ac3c6a71f1a9cd29c43ffa2a0bdf23da96dcd6c8135b5a88/pyhmmer-0.6.0-cp38-cp38-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,891   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b4/6a/8a3467282158fac08ea0dc646378789abe5dfa9e77af5f25a1fb658e3a3e/pyhmmer-0.6.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,891   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e1/24/e5cba7b51dc391c8bc45dd7f98e61804088f8cc35346b362dedc94fae471/pyhmmer-0.6.0-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,892   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a0/ad/68a14e424200099462bd97c58fefe3b428a6522ae11b2e2b195bbbd6d15a/pyhmmer-0.6.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,892   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b5/2d/cd5b9729a37b0cdbe932461c79f74c75d17ac665f080f95633a8c275852d/pyhmmer-0.6.0-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,893   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7c/e9/3a1f5a5aa46b482a3bca632fff9cb173c91ba5f02a96a3f5c0d730660519/pyhmmer-0.6.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,893   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7b/72/119583107572a60f86e0f8578a7bf5d03928eeb3107d3e469336c5c41245/pyhmmer-0.6.0-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,894   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5e/8d/2743d1944b793b1182955de2143776ec786c239e6c69fb8da18fb4db17ed/pyhmmer-0.6.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,894   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5b/e5/7dae65e0e3f3724535d49307db46975b4eb1bc62cc77a1b2dd26ddc308a9/pyhmmer-0.6.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,895   Found link https://files.pythonhosted.org/packages/66/34/775e5243113c2d97ae0ed9e6a39f145549bf85c6215840b728fa9a3f6b89/pyhmmer-0.6.0.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.6.0
2023-08-16T21:05:49,896   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/02/87/0d2511754cabbe05b89d15eea01a63f886dcf4697934c121df79b47a281a/pyhmmer-0.6.1-cp310-cp310-macosx_10_15_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,897   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/89/73/9dcef15dba0a3d194c2efd78a64478d9fe368745a5f76b4d7c321da3929f/pyhmmer-0.6.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,897   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/79/34/aaa3d15ef7bd33ef7e8eb8a92ac49e975355f708448e88fe4af98909e4fc/pyhmmer-0.6.1-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,898   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/11/2e/dfd760137a8b144e2341a07ca54ce170a83bd4982641ea31ee90fdfd0837/pyhmmer-0.6.1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,898   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2f/63/7c21fe2dfe3cf76c8696fd612327733e3d985161cf70f255937433c3f6aa/pyhmmer-0.6.1-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,899   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6d/c0/91f4f28744b8b7f90f729b3f06b2732ce1c6fb354e6643585f4d5b9fc5ee/pyhmmer-0.6.1-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,899   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e2/64/f3503102d6a0127a703b6730c8c6512dd0a1b2f4616453194ec3e6552797/pyhmmer-0.6.1-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,900   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/32/ea/04d07b60a7744ac480c825cf31187e6296e031b4f514ad17a79f9973c882/pyhmmer-0.6.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,900   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/61/46/4fa17c338e3db5820ca0c98ffe41c69dae85eb96372e333504b9d780bd70/pyhmmer-0.6.1-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,901   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/27/82/c9dbdf556c27204f3c7452f3dc6360b3d6a5a7a9d139a6dab992a0a33af6/pyhmmer-0.6.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,901   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/00/ba/e4a5a835581363c1a6809656518b2b5bf2b668d0cc8bba6a91aaab864023/pyhmmer-0.6.1-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,902   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/60/bd4cf94201733ee99960638e205d34547e1814a7fb95d2d5fc84df6c6423/pyhmmer-0.6.1-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,902   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c9/53/f6a6fd098e6ac64f2c0060e2e8696e573197898751b42fde2887ab62fe73/pyhmmer-0.6.1-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,903   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/09/be194e9996ce5b9b250af009792194de38d5f38537a07b787d77bd7c2020/pyhmmer-0.6.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,903   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7d/6b/d6adf535b346904db4dad94b57101d495fcb2a1ba2b0cb9a2b9b5c11aee4/pyhmmer-0.6.1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,904   Found link https://files.pythonhosted.org/packages/cd/14/0c156809b9f92d3b0e7af334b0978392f15b2247c4bbb12c16d8f09a05f9/pyhmmer-0.6.1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.6.1
2023-08-16T21:05:49,905   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1a/58/bd0cf943e8530a77288c09068655fc165b0c0b8e92c13a504236cef318f4/pyhmmer-0.6.2-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,906   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5a/7e/0ae123e0917f504cd5a286eef569469a4da0bdcd9c8dd2472c95b9cd52d0/pyhmmer-0.6.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,906   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a8/f9/72faeef1934a86623f8720070d2bfcd4518492e95d6afedf7cb093f06b9c/pyhmmer-0.6.2-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,907   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/f2/bd50114e9224a290b2a68c9651b9e35a950656a6829307a1a4a432fd45be/pyhmmer-0.6.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,907   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/74/c9/2ffa4ca300bc0effd026daaca1db9ccd718551439b73f4a792ef57ec38fe/pyhmmer-0.6.2-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,908   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/66/b1/957e1be040cd2b5778941c9a4b8caf283e328dc4608c61b54dc4f44dd677/pyhmmer-0.6.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,908   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/25/4a/2db5464d2bb8e41bb346060fd9c3ceae2043c60af6621f04c8e49dbecae9/pyhmmer-0.6.2-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,909   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/60/a0/4d7a8f68dc85cd4cf70a39afc592ab67a2e703149887dc78f4d2031a3d1c/pyhmmer-0.6.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,909   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2e/b8/a5edf3701cb051f9b8f397cc0ad5312bad4eb6eb761c99ec294b21c922f7/pyhmmer-0.6.2-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,910   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/bb/a1/103087f3aba399a852295b2865a66357570a2c0a5c1c98ae1cce916ab468/pyhmmer-0.6.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,910   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d6/e1/4d9ff4eeaef082868cd75110599e2b123191d2d28570b52f837c7b4e8c31/pyhmmer-0.6.2-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,911   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7c/ae/0b5f48c0b450b59edc60b80673c1c1d3a476fd0e1a67227c98bc24f5e119/pyhmmer-0.6.2-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,911   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/42/f72235b8fff6279f6f597c4766b42e5bf4d5f99b8952aad09262c191cb0d/pyhmmer-0.6.2-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,912   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e8/42/0642f761e61259b3c5263fe33ff1b94fa5db04f416c2bde2b620daca9b59/pyhmmer-0.6.2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,912   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/41/b8/cc677cadee7a7014e6700c87d8ff24d33d9118b6d1564b6b2660ddb7ca17/pyhmmer-0.6.2-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,913   Found link https://files.pythonhosted.org/packages/26/6a/f2618f79593b64a409dba66026d7fc921ae8837726f0085da1707239a8e4/pyhmmer-0.6.2.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.6.2
2023-08-16T21:05:49,914   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/29/53/70ce5950fa95a9f6c4c296f2d08ce0de8b78d66054f35746c9e38e5a7287/pyhmmer-0.6.3-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,915   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/47/80/ca9f919c80b20030c3f65ef28bfa53c95453b69e7a24ac429964df65c7d0/pyhmmer-0.6.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,915   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/79/d1/c6278687d5c1b292bdb69419cb3c241a33cd049487e3f6f8c1ea49ae2f63/pyhmmer-0.6.3-cp36-cp36m-macosx_10_14_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,916   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9b/fd/18eb2593b4e78f2b4c354ab2c27f44c7005c871cbb88f5979363f447a3f7/pyhmmer-0.6.3-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,916   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/23/3d/29a3b664affa3d543bf179c4bc564028436d2d664750d07cb6747610d0bb/pyhmmer-0.6.3-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,917   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/23/8a/c9f6d67ff2081be71d5bab224f86dc9fbba04b3a9005d98d1bd4e7abe711/pyhmmer-0.6.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,917   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/be/40/6efcf88705d32d27951d1d664a8cbb2d43e7b31afcd44c281b24d02f6f0d/pyhmmer-0.6.3-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,918   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/23/4f/5c7b8169544823f5a72bc2c6471a8f0d1f4d009ebab0ed93cef5c1e770cf/pyhmmer-0.6.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,918   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d6/b5/82b7212a91c29b78d1de6a8d701bc49bf33965a2f312f12892b56e66d6cf/pyhmmer-0.6.3-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,919   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e7/cd/e8865ac7b2f95a62f3f31ecc1897006d8bd88d14516a8ab91409fcb4ed0c/pyhmmer-0.6.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,919   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c0/2d/2fa37cb9c2b146fbcb6b616cf04750e7cb0654d9f3654426f5c34ec986a6/pyhmmer-0.6.3-pp36-pypy36_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,920   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d3/8a/1f93b031bf44594726d5381ae9e701b44147707375140864becad63dc960/pyhmmer-0.6.3-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,920   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b0/fe/6d1566d1b58a9cd0519ee81760177350e2bbba31683227a426e5485cfd61/pyhmmer-0.6.3-pp37-pypy37_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,921   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/30/d4/c43a67e5b31e63a52e7a4204502adf4e43e7c3d5b2f453789d73935dd027/pyhmmer-0.6.3-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,921   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/63/f7/a794532449c381535fbf2955c1707bc89a823d7454658df2ac13eb83d6d1/pyhmmer-0.6.3-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,922   Found link https://files.pythonhosted.org/packages/97/96/56a83e026412eb4714f313c444393453ef203e4ca1189de2c9907a9654f2/pyhmmer-0.6.3.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.6.3
2023-08-16T21:05:49,923   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/01/2646aeb1261cb03ab15fbfb6bc902ea896e75f25e5ed38ac45be33375696/pyhmmer-0.7.0rc1-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,924   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/49/f6/375ea7dec9ec46fe919687f992bf2f8326a7f08449a94b3fa316a02d67de/pyhmmer-0.7.0rc1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,924   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1f/aa/9f76d8281d452ce142cc95cbfaeac15c76b2960949b2f5c9e12695e53cbe/pyhmmer-0.7.0rc1-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,925   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0f/68/dd15664d24aceaef5e94f961bffa45d9095d8f8499d64e78eddddd1ef7a9/pyhmmer-0.7.0rc1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,925   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e5/01/cb2f9126a8cc8a16f12651d80cad00f1c285451ba20ead2b461bb86ff5a7/pyhmmer-0.7.0rc1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,926   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7f/16/5269fa02ad5001fe304296e4de68cc3b316981363a07e0f620d034520e33/pyhmmer-0.7.0rc1-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,926   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8f/6c/66722b1c98eb72b6f2264cda1392461ba1a7beefcca6e6d56edb7a58baab/pyhmmer-0.7.0rc1-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,927   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/88/b3/1c509150cabbc5829c99e24bb0d27102407421be6eca4f93696a9e3c6c6c/pyhmmer-0.7.0rc1-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,927   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9d/f3/d93ce4c8096abe40f469514dd94fec0c6c7e7b687f2cdd00c40960b17262/pyhmmer-0.7.0rc1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,928   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/b7/2c01ce15f1931c19f141bcc471ae8aec3238ee6b7ff32e62b0c6488dcf5a/pyhmmer-0.7.0rc1-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,928   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ef/dc/176eed80e4ead0ffc4fb150c48e98bba98063ad079df4dac8435448ce05b/pyhmmer-0.7.0rc1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,929   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/25/4d/ae2e1c934c3e4fc67f8869b12b1333cfe908b99299aed8ee7dc8f7eca7a2/pyhmmer-0.7.0rc1-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,929   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b2/97/755b4f2c2b09ad2266fc38914be01645b96d771c6e3351ea9ff82b2e7310/pyhmmer-0.7.0rc1-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,930   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/be/36/dac07936503be8a2b9461b4e55b2434d5d2cc6b2c385a2ffd0c2c80bb347/pyhmmer-0.7.0rc1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,930   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6b/34/545b15abe131691ba9c0445567481c2a08eb5cb2e82ea81f687ed9ace9b8/pyhmmer-0.7.0rc1-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,931   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/09/2e/a4931aa6ee3a39b72d650c44fef2282256cbae34f401d00e78c95169918e/pyhmmer-0.7.0rc1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,931   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e7/66/7146d3ffbb6917adcb31600e6b5037ecaafdf2198efaabe8b26519d3aad1/pyhmmer-0.7.0rc1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,932   Found link https://files.pythonhosted.org/packages/07/f9/aa30f9a062a03215706fd914a193d012c869409f0883406963f5097ec7f1/pyhmmer-0.7.0rc1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.0rc1
2023-08-16T21:05:49,933   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/64/27ba87f3a6b5bd028bde8e63579e4fc7729abb207b6e9e700cbf51dc7b30/pyhmmer-0.7.0rc2-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,934   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/57/5c/c79dfa8fbd70302047cd5af55d5a5634ddce263c160cf0bbc298817b28a9/pyhmmer-0.7.0rc2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,934   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cb/8d/c56e4948c9a2d712e48ef730fa4a9689625d68fc056bbef60ffc0ddb06f4/pyhmmer-0.7.0rc2-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,935   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/49/77/4a2cfc97cb2432d41d16bb851e01360e3f6fea5579c153083220927e779c/pyhmmer-0.7.0rc2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,935   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/19/9f/c9bd67b4506ea74c87aa2170245f52a7ef31d9ab0091c1f341c6cf76fa9b/pyhmmer-0.7.0rc2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,936   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8a/03/ee7fbc006cfd40bacc68f90e34ae6c0648eeb66e63f1702c57a595f23beb/pyhmmer-0.7.0rc2-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,936   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/47/f6/b77002e48c526bdb1ec0bee0697ee021f31702ff7618adc1f7c8458638d8/pyhmmer-0.7.0rc2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,937   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c1/56/143d6ec67af6539abafac7d5ed7eda2f7dc4a22dc7ebeeb491a808a923a7/pyhmmer-0.7.0rc2-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,937   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c8/35/66d385727a9178511182bfe841a12d45f7f64425fdfdd9ed0d93e6a74bb8/pyhmmer-0.7.0rc2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,938   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e4/d8/d5d5bec33f7ef7e4162e43e846cec992055d17864c098a1e55b96a34050f/pyhmmer-0.7.0rc2-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,938   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/39/c0/6a46e969f7c1f77f5cc19011827469176b0569cbee1f2ec80f5865f49ad6/pyhmmer-0.7.0rc2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,939   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1c/92/5602f15a7bbb92b08e92e4636813015754067aa97c0511ea1801852c1e66/pyhmmer-0.7.0rc2-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,939   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5a/ff/ece5bd11cf4cc3ec6f664f0e3a111ad6dcf207d3f6ec2ad96165259a412b/pyhmmer-0.7.0rc2-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,940   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2e/d2/b4d94b6921db1e4c69e9f41bb559d66fe18a2a098cde1e6434706e1eabc6/pyhmmer-0.7.0rc2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,940   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e1/55/c39dc94317204fd84d5d8bbb6aed951be0706970eb5e3998aa0a4a35f46b/pyhmmer-0.7.0rc2-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,941   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f2/b9/46f7e47792b6dcd5d3330313efceea13105448ae6f6cb13af72cb60427d1/pyhmmer-0.7.0rc2-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,941   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/31/df/48df1569e9c0b21ad86060b804c14fb3c91c3fa5aa95f09db8ff0e4c83e6/pyhmmer-0.7.0rc2-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,942   Found link https://files.pythonhosted.org/packages/eb/b3/da26ba5e02d827e39ecbda73b5d7a7dbb805e94d3ae8829f3ce2adc8d027/pyhmmer-0.7.0rc2.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.0rc2
2023-08-16T21:05:49,943   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/53/91/36a44e2e838e58b36ebb192a899e6f889f112248fd08d1a877774db87a66/pyhmmer-0.7.0rc3-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,944   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cf/8b/45d7eb18b457d0a36bacee35ad14a52af74c6ad5eab2901492996e9aa4b7/pyhmmer-0.7.0rc3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,944   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/41/75/25d2b67c70032fd8201bcead370e87316ed0531854aaf2b9f3061623fe33/pyhmmer-0.7.0rc3-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,945   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/53/f3/a6f3b814701a7fc0652810dcdeaaf6a60aaf90d30de21ca7c2fb873b5762/pyhmmer-0.7.0rc3-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,945   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/10/f3/34c8cd78136ee6d53b229005b76e4949a99723c5b075683928676ff8a8ab/pyhmmer-0.7.0rc3-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,946   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ba/8b/231ca0dbb96d64646a22c943988d7d94ffea8b77335f943ab23504493058/pyhmmer-0.7.0rc3-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,946   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/ed/b906f6c410f04eecda1943c731e45a73448a98ce8ca04984bfff107b217d/pyhmmer-0.7.0rc3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,947   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/59/1e/19f92118d755272eba30bfa611635be0d67428d65dfc5c5ecd544e45e0ad/pyhmmer-0.7.0rc3-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,947   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ff/2c/bf48a68a87561fa1e263ca6cb00d1345794280070dd484845aa2d4cf8844/pyhmmer-0.7.0rc3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,948   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/48/67/2c8cd7621f44f1cd92ec244a9463c00c90f02a1fd5efe1be5617828055cf/pyhmmer-0.7.0rc3-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,948   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/73/a2db2e27de1d9b6006d6db695b5238e850b9431ea7c57eea6988a6664b31/pyhmmer-0.7.0rc3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,949   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/35/599a1e9f081d8e5daa34f62c9225012ba906ae872d426f4b74a3a9d5b4fe/pyhmmer-0.7.0rc3-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,949   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0c/d7/389876620f3b9fe1feea99c9b6b482d8b1f115671c06fbaa92bda816c189/pyhmmer-0.7.0rc3-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,950   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/90/e1/dcccd398039ac13a2a23114fe29ba40a1270c0498b9c7d15dccf098d02db/pyhmmer-0.7.0rc3-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,950   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ab/22/86eaea1f4be5e5dd587f216169ba9f7a445b166b719c4fb364df45cf5eb8/pyhmmer-0.7.0rc3-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,951   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b2/50/e377323457ca4ac99d9a374e5a2d23cefc1007eedd186a1e33a4ed5531fd/pyhmmer-0.7.0rc3-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,951   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5e/99/f426e48fd4c851ff69b0d669d9c7f782c7c8c0a4b753dd93d7dcdc18a91f/pyhmmer-0.7.0rc3-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,952   Found link https://files.pythonhosted.org/packages/cb/78/d51baf5d1a2bd5040c253ca8a847b92f6a361d08ed6e108ae8ff10fae578/pyhmmer-0.7.0rc3.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.0rc3
2023-08-16T21:05:49,953   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/70/8c/41e7a4d44918a08c02a8b529d11d45180fc640cf2d21cc83427f0e5cfe06/pyhmmer-0.7.0rc4-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,954   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0e/48/b2724ab2e2b17767c9c89ead899fb8e16378228c2c5e7b596861eb8e6c59/pyhmmer-0.7.0rc4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,954   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/41/05/5e72907607e3cf2d51cee789ad84fbf627d638f4e7c437c0978fc4e3d29b/pyhmmer-0.7.0rc4-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,955   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f1/a3/11d657ea4e443f0ae4f94545f9da7998c043b7d7e8a1757b7d08c30aee5f/pyhmmer-0.7.0rc4-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,955   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f9/2c/3eca6732d620870523194f097bd4648d7a6bd7f85aadc50c0dea34488e4e/pyhmmer-0.7.0rc4-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,956   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a5/f8/6cf5263d5644cf1c80d6bead0aad5b66ca9ec122e2c534f1cbf83dcac95e/pyhmmer-0.7.0rc4-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,956   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e4/df/15cc4cfe21d13fea3111c44ac170b354bd372bd75894b716e6d4ca211ee7/pyhmmer-0.7.0rc4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,957   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/32/be/325c4598931621a786765a05aa3feda8c618cd7c7441d374844ce56fb0ae/pyhmmer-0.7.0rc4-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,957   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/bd/b9/97c2389cec088ae3cd65d945ccd7fda99140a831b290cc1938708188af48/pyhmmer-0.7.0rc4-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,958   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e8/27/a5f9c4c906b5e2047bfa71709d96c26944508615dbe08f4b2fafd952564f/pyhmmer-0.7.0rc4-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,958   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ab/c0/3ef8ced20ac64ab83d16d855b23540751c1626d1d5b8e8cee4440bcabfb3/pyhmmer-0.7.0rc4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,959   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2a/df/a287f8b111ba8688c5c58e772e6d276fb3c14515249e39a50515160a85d2/pyhmmer-0.7.0rc4-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,959   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/71/e5/96ce896b08d17b9114817c947683e144e760f58bd9f48f53f5436ef25079/pyhmmer-0.7.0rc4-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,960   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/a5/aa8fc0a41d66c95b60097ed9aa5d11cd9b1be853c1ffafeca1e42f1095b6/pyhmmer-0.7.0rc4-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,960   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ba/7d/284867ffb3cd7eac7de62716e1dbb495331004766acf8f49419f0d04e103/pyhmmer-0.7.0rc4-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,961   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/0f/e0fdfe3a3872753e8205280a83f8bfb09cdd56050bfb84137627c905bdc0/pyhmmer-0.7.0rc4-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,961   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0d/c4/049d1b55164a4593e7d7ef55b6f0364b03a7c863f7f9d6a4730c5995dc20/pyhmmer-0.7.0rc4-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,962   Found link https://files.pythonhosted.org/packages/64/87/65526708ee20e910b253cd36a32d655e4f4ae5efa92817b9d45f6e80a5f5/pyhmmer-0.7.0rc4.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.0rc4
2023-08-16T21:05:49,963   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/db/a8/5302df454773f5b6a9dc9c29d540b3195f8d10ea47773bf5ba2fe934c065/pyhmmer-0.7.0-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,964   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3c/74/ee460564fd2c0d9404e75649c4a5e476d962c37b018de89592f7960d1325/pyhmmer-0.7.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,964   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/36/e9/3d4b55e50c0815ec25f18e367982e588bc84033e6b8d5417671210214dc5/pyhmmer-0.7.0-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,965   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7d/64/775e2adae614da4f3481e035153058f95338913b433d82a2b295e672c753/pyhmmer-0.7.0-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,965   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e5/f9/c669b9adabe8996277e8a2bb6f08568509ea95cadfcb76121150d24b5f93/pyhmmer-0.7.0-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,966   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4f/54/985dcf1e22569b0904bd17b1f17e713dc94a7ab13b767c9f5d90f54daba1/pyhmmer-0.7.0-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,966   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d7/04/5277c738b8789802cf308662e7eb69535a5dc04d77088937cf749173c7e2/pyhmmer-0.7.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,967   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/46/cd/2ae79c367d9ac8df13d62cd7a7c33f8ae37c4b7084886825e616862fc7c3/pyhmmer-0.7.0-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,967   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/12/df/5d0e476aab5fa0fa99313e9f2c1d641690381724e8d691a4fe42b7734b6e/pyhmmer-0.7.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,968   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f7/af/dc4680fa932f2bf899f08438eb08bd271f2602454a0a0a8a2fede8bd2abe/pyhmmer-0.7.0-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,968   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/51/03/a89c205cef3d63d140049a204977c5903adbcc2fffcd37f903a155fa5cc8/pyhmmer-0.7.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,969   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/81/47/eeb9204615d3acf39fe7ba1f5d0209d263c747eac405ea97e3ac6428c7a9/pyhmmer-0.7.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,969   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/be/c8/273b776dc57d54b80741592ca6aee62fb31982f4ead0bbc1510a3d89f95e/pyhmmer-0.7.0-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,970   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/dd/15/3005213eddd959f34442df93ebc4e44c28bb223ad9a7fa407ecc8b788e92/pyhmmer-0.7.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,970   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/59/e5/abea9b8c2217a67965d536d91263e89b9e1f896b54608a9e1354e6b4f38f/pyhmmer-0.7.0-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,971   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9e/17/03f003657c307cd45ab90e60c6ac65a72b895610952fcc41bcbb16c20013/pyhmmer-0.7.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,971   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1e/d8/f7b849eb87315778cc9a4295372bb3c5680616558edd48b4cb48a2cc1eb4/pyhmmer-0.7.0-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,973   Found link https://files.pythonhosted.org/packages/b4/aa/5f50a6780689a7372c851c8474fd5487b65d3df53f2a434bc5a99bc01cee/pyhmmer-0.7.0.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.0
2023-08-16T21:05:49,973   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d9/93/13708d5362f3eeeae6bb9dc49dd033e78b2f36556581dff3a1a4c8944b9e/pyhmmer-0.7.1rc1-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,974   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b5/0d/38ef5d23d1a5cb2a9fa802be2e3e5515584db19a9e4b571fd287c7ea3bf5/pyhmmer-0.7.1rc1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,974   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d9/de/81f869083b51909d42e48df30c28685c811f59c21f8ca42a4bc565ede604/pyhmmer-0.7.1rc1-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,975   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9a/e8/add2c7bb63616995f729fb215fad8dc578ac8de57e469830f42878e52a32/pyhmmer-0.7.1rc1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,975   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4a/6a/b83eeb054f43e80c0cbe6877314d2a581b51252436da6a0b91fed65482d3/pyhmmer-0.7.1rc1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,976   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3a/cb/fcf2cdb81b840f0d81299dad023301851aa18832f2dfd9f35a6b502f4ccd/pyhmmer-0.7.1rc1-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,977   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/08/ef/d20b8278dbe3e1af0e5b3bced7315c98f4a53f84f42bbcd4c1ab4cfbaef3/pyhmmer-0.7.1rc1-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,977   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1e/24/b5fd39220f4a8837de8dd1608eb53b724b123d57901c25517ea6f51f0924/pyhmmer-0.7.1rc1-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,978   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ab/88/677dff90707b1581bf59d40a2afd52173654e6ac159170a80ed9622aa96f/pyhmmer-0.7.1rc1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,978   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ab/95/0c6493ed1170c5cf11fcfbcbcb0272117d9b7d9c6810604ee0b54d809d19/pyhmmer-0.7.1rc1-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,979   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/16/b6/ffe3c7a7b6b4812c633a1ec63624e8c684c2f9ae9ec3aa2410adaf6d8a35/pyhmmer-0.7.1rc1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,979   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5a/3c/4417c019a459d64aeb93b5583c5318d5dbbcceca09122c7b2dd70ecfea9f/pyhmmer-0.7.1rc1-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,980   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/21/17/c60036e61557900aacc140b1203dd88269f9f4c74619b1d93338cbb0f3aa/pyhmmer-0.7.1rc1-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,980   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/17/be/1f0953d157c07307f3223edc3f7cb55a2f56965a9f7c864f0bf8e0dbff95/pyhmmer-0.7.1rc1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,981   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/da/d6/3f260928c49eb449d5917cb1820f54826544cb5d5073591b6595b20926bc/pyhmmer-0.7.1rc1-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,981   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/01/af/43f2bf25a61767df0fac21c668656715d45ce051363d1ee7f897a11baad9/pyhmmer-0.7.1rc1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,982   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8d/5b/99159669ed9c78d16ad48eb9cfe9125b1de55b89c6896113db6d7db01281/pyhmmer-0.7.1rc1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,983   Found link https://files.pythonhosted.org/packages/ba/63/dbf48469522286800379be94c0aac9ca387e8b55dd2aa3631d25aa6b3670/pyhmmer-0.7.1rc1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.1rc1
2023-08-16T21:05:49,984   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4e/98/68ecc5a2aa3be261990a6011fcf7a5279895e8d04ec92802771dd216338b/pyhmmer-0.7.1-cp310-cp310-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,984   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c7/1f/314985aa53011a9b7a217f92cba4448c77c535c55b48308def97d4ab40ab/pyhmmer-0.7.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,985   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/63/3843021512df961cac8ea24e3796995ea0206a35709bb019adc471c5e115/pyhmmer-0.7.1-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,985   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2b/62/e270b0e792b85332ebbaccf137a9b3c33ff035c4be12ec3760aed67dd5da/pyhmmer-0.7.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,986   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ae/0d/f38735e35b50b639b70c9a74b58ea25614a81b0a188d89b692139001bca0/pyhmmer-0.7.1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,986   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2e/49/2363ee3fe7995921638cfa8f2df825168c47e0bd05f24374319e6bc8fa5e/pyhmmer-0.7.1-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,987   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9f/b1/88afa91956eb78f5b19f3e44fabef47e0bc8bd2028c33c2f1740a2ddf406/pyhmmer-0.7.1-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,987   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/29/a9/acec031f4435e796440521c54f78f978cf91203615c29b07c7c9697840e7/pyhmmer-0.7.1-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,988   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/65/16/57009ec67d1b33dc1bddfd40c054d0fa2ed0970c357249b81ca9b2c80ac4/pyhmmer-0.7.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,988   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/65/61/e5d74affedd6c3ff3d2c17e8dd278921194411035ff093dbb17a8f3e4525/pyhmmer-0.7.1-cp39-cp39-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,989   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/93/f3/b3f6892b4bb54f3e74c255b7e977acb1b0149601197c40d0e388c481897c/pyhmmer-0.7.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,989   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f5/95/fb8f90d881b6253d0ca29b0fd714b2237733721aa108b20272801822d7dc/pyhmmer-0.7.1-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,990   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5e/77/bde94d470ac47242abc0754a02a21311339c2d4fc367631d91a940946ab1/pyhmmer-0.7.1-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,990   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/83/d3/462aea5aca8f8169bee7b77b380d0221bb8b452e07b54967b352fc9383bd/pyhmmer-0.7.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,991   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/95/a2/173fe1c90b803e6bfef9190ece6e479552be0f8afdb606e8639d543a35df/pyhmmer-0.7.1-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,991   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/45/64/476e25cf2eb37d76881022a6c42c8da9e06a93b1af51fc596ede5c6d68ce/pyhmmer-0.7.1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,992   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/22/b0/978fe1e68b3bdcfb1662358de0b11229dcb0af7b04fec6efdabe0270389a/pyhmmer-0.7.1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,993   Found link https://files.pythonhosted.org/packages/08/b9/653e773ff15145759bf2b8365c88e2f5aad1f30addbb1eddbde05bde02d9/pyhmmer-0.7.1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.1
2023-08-16T21:05:49,994   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/23/3a/5cfa3d249b3b2d9a15efefe9fe084d3cdb02f42a986f923165ed04d0d9c3/pyhmmer-0.7.2-cp310-cp310-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,995   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ee/77/b3e1ed830c69047796d6368d0e4e56280e3962650af7a7aa90fd5fada9fe/pyhmmer-0.7.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,995   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d0/09/566484b8473a0216d855221e6b21b3ed6a7c8ec31bb08966cf5ce6dbe5b7/pyhmmer-0.7.2-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,996   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/53/8f/886997e0b208edbab94576eb4dbfcd56dcac054700f7246a15300098e210/pyhmmer-0.7.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,996   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ab/20/82e0a7504688cabb764417b4d141b0bb96f86632b8e499773e0dd391c9e3/pyhmmer-0.7.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,997   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8d/d5/e46bec7d9e8c5e242f7f6c3286f8af3bc2ae4bf9ea42d91e1f8d426b7561/pyhmmer-0.7.2-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,997   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c8/dc/9356b86de2f272c8e0cc4f577c72d3ae4e86727e26491f80cd8dc8063a9a/pyhmmer-0.7.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,998   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8c/36/5fda154acd4dbde82c5f8ef5d4bb2532707c8b6b1138645673773ac139f8/pyhmmer-0.7.2-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,998   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0e/e2/f830bf6972a294569182d6ea4026af2a902fd6cdd6f06dd0ed62bce231e5/pyhmmer-0.7.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,999   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a9/39/0098a2887eb2db25c5cd259dc8635beca3b1aebb18d56b95fad851592223/pyhmmer-0.7.2-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,999   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ad/cf/b678ce405273a64b4295f73a3357e988b2bce163862a9730a4b81650c626/pyhmmer-0.7.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:49,999   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/81/27/44ffc8ed4f96c4c5cc2fef672cfb66c9d84f1f26bc903c812b0b4fa4d673/pyhmmer-0.7.2-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,000   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b5/c6/c57c9f59c6d5c6e177aee95307f863bd058585dd0b0bfca4c34f7f13cd42/pyhmmer-0.7.2-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,001   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/71/db/4f93af5a00686347346a325ac84cae95fe6af81681c3489c83ac27629862/pyhmmer-0.7.2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,001   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d1/f7/4bbda84916bb53d5427da8950d2c057db73fccdc33c632c941c524cdb53d/pyhmmer-0.7.2-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,002   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/81/03/cad0781ef73c4f4f52937840947c8d49cf2b2cbbd070c44b59e31d263a69/pyhmmer-0.7.2-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,002   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/15/65/80d52997be40674fd2c69b9828b058760e41b776b78af40a72902b86acd6/pyhmmer-0.7.2-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,004   Found link https://files.pythonhosted.org/packages/df/a9/2657add69b3315c419cb618bd3d7fd5980a6b0f30599111e6ed64ca3cef4/pyhmmer-0.7.2.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.2
2023-08-16T21:05:50,004   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/43/c1/73a9f4bc5dff132e66d44aed2c65fe49d803345383ad1ce3be8263b90e67/pyhmmer-0.7.3-cp310-cp310-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,005   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c2/da/81f51877f44a77d141dea4b76937158affd960ef965ebfe0b5c13402a8f9/pyhmmer-0.7.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,005   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7a/1d/f1f7d1e4f936603678831b3bec693038ae09d7efd6eebd1324d0942c1659/pyhmmer-0.7.3-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,006   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fb/68/6fdcccd7979cd0092039016c3eac4caa02a11c1d3890ab0951311cc07744/pyhmmer-0.7.3-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,006   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c9/a2/b2a5784e37a247475e4a58816ccceec0734c5bbbc1a9a231306fc6735d8b/pyhmmer-0.7.3-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,007   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/81/96/ea0e67c0fd99012756abef527adc30a2528315cfb75944757faad9b78c27/pyhmmer-0.7.3-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,007   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/62/49/d59f2cc10afaf02538988eae5d76975a0d402a2b641fe161d46a5a3a5b62/pyhmmer-0.7.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,008   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fd/74/2dec67a4756891cf0b45fa2ed3a1ca0d4a06ea3a3064090d20cf0f47e162/pyhmmer-0.7.3-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,008   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/04/8a/c3403218b9a93886aa949854a90b7ccf6beff39c85a0f4f722f31811202b/pyhmmer-0.7.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,009   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/33/b93f0ad31578f0c73948c8db6cec68f6af01df5a4df1da0727c9201487dc/pyhmmer-0.7.3-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,009   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/be/4f/70cf9da314d59163bd93c4a3cd8a4d0c6caa53937cdd6464c54d6a0268f4/pyhmmer-0.7.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,010   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5b/82/773159b8884f7a385e53499c92514ab66d3acf4f486a476675e2543d4c53/pyhmmer-0.7.3-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,010   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/70/a0/f5001efc6131cccf6e8e8f53026e28aba2e5effb3a04f131ded183390062/pyhmmer-0.7.3-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,011   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/23/1d/3f8ce18fe6ecd457a3692c313ebbc956f3ff2f0264383e4a5ef8073c20e1/pyhmmer-0.7.3-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,011   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9b/58/1a70407899294d0acabfefb2ee95027aef14b03fe0501cc5e0673c3896fa/pyhmmer-0.7.3-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,012   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e2/db/62121a05d99bb99e7f14f0fddb97e82ae2bca48c891dd16d09f99b3eceab/pyhmmer-0.7.3-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,012   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b3/56/a1d60989df6dd057fca1566c4ba98373572236c886241e68e96af82fe92b/pyhmmer-0.7.3-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,014   Found link https://files.pythonhosted.org/packages/63/6c/9ba4ec4440099d30c4821e8740edb2340e6192b934e81057f7921666c1db/pyhmmer-0.7.3.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.3
2023-08-16T21:05:50,014   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/dd/bb/fdb1068e287b6d09a73c1f7fa16aa2a850f0222f6419b8dcdc118815d409/pyhmmer-0.7.4-cp310-cp310-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,015   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f4/fe/23f9ad6e15feb0605df76f7585d681d79675982bf34ce4767f9ad08a79d3/pyhmmer-0.7.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,015   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/c8/64e1960c86439c6002664077b2c25dd6543d65b0dd204c2e4c064fa0bb6a/pyhmmer-0.7.4-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,016   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4a/3c/13929dd0c58c62b1513bdfe818969e6f2ec4da023527b38565af60b91b8b/pyhmmer-0.7.4-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,016   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/44/2ca763c3a425e922554b8eb10113ceb8c195639c6fccea846da2551cd923/pyhmmer-0.7.4-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,017   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/68/40/7dc955411414cee0db769d602cb2e8d593707786c9572bec05721491c5a9/pyhmmer-0.7.4-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,017   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/56/26/b8f4f0f8c71bf51d30885978636e4281ce8130bf57136d2d048da93ae2a9/pyhmmer-0.7.4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,018   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3e/63/5219330ab124df581bc1d23046ff5b43534e606e9bdcf2abfc10a50b62f9/pyhmmer-0.7.4-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,018   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a7/7a/7e3d72b99ff0cede0022113042bc09f911041437a8f80827103b660bcecf/pyhmmer-0.7.4-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,019   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b2/16/e251dd701b9f1d6a63e3cca421108fc6cebb8538a9f6869296c6644a0c2c/pyhmmer-0.7.4-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,019   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/52/de/a269128e8891b97841930cd8addac3595dff08c1f90028619f7c73359cc1/pyhmmer-0.7.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,020   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6e/f6/44c176d316f9becce866f4536f026e433df3939052b5ad922013e324c400/pyhmmer-0.7.4-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,020   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0c/2f/8b471542f68ccfd607cbd8edd5416bb054c454349f72d1ec1aca4546ab64/pyhmmer-0.7.4-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,021   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5f/5b/56febea19382034f45f8efd31e4cc025e88d47fcbf3b8a702e67daca65d2/pyhmmer-0.7.4-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,021   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3f/4b/b94e77c892e9b6c656e753fe00a2e244dd63ceb1114004d3ab4c66940fc3/pyhmmer-0.7.4-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,022   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/df/9b/9dd24babb7f1ef8a2fc26e39684ecc85193685b14cac93b1ab3821eada03/pyhmmer-0.7.4-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,022   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a0/0f/687049e993619cf051ce153f9f5d195290f9df872a46ef5ed55f168cb073/pyhmmer-0.7.4-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,024   Found link https://files.pythonhosted.org/packages/d4/83/1abac79f144f82424fc1e3959db6fda4d5cedc251d804b0bedbfca9b90b0/pyhmmer-0.7.4.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.7.4
2023-08-16T21:05:50,024   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e0/76/9d254f4f85a2b15718dca73e2091837e359b3b19eb30d47ae15fc236c088/pyhmmer-0.8.0-cp310-cp310-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,025   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/da/4e/6698347f2848bf6e953daee133c6cc27fb7f340a1946815cc9566a3a3539/pyhmmer-0.8.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,025   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e1/72/99abe4102e7994572f8d786abaaa8974352e917a690e888c2becc89f93b6/pyhmmer-0.8.0-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,026   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c4/a6/2560bcdda70fda6cb767272851a84c700ab754bb3193ab4e7a077d10cf3d/pyhmmer-0.8.0-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,026   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/54/80/54e8e341dd4dbe26f6421db55e52a5381403c5a7fdb505b6348dc9661e07/pyhmmer-0.8.0-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,027   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ff/c5/7fd7e8f5418e609b6d6b12c5a24439943d85600a98ca94a248cfcf5aa1dd/pyhmmer-0.8.0-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,027   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9a/d4/0d65fae4b288faaec2eb9cc27db600a01dcf50be1ad4961904340e1b74f6/pyhmmer-0.8.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,028   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cc/73/fe5f2fab87655bb9eb30f9b6177b1d4b1593873d12960a5e4fee74d9c9f2/pyhmmer-0.8.0-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,028   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/17/8e/1161db151a5638878ffa1de64d6af0133a3a24400cd02ae6967aef498c4d/pyhmmer-0.8.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,029   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/71/2d/6d020e9303d2422ed199d3181a96117b25366bef87fd4e1d49f964644a72/pyhmmer-0.8.0-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,029   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/bb/d6/df65848b5f3c3ea24a7a1a19fee4fd559377953d62e048bec4eba7b68043/pyhmmer-0.8.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,030   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/88/90/0f0af36b0861b542292872bf99696eb852bb2ffdae35e02532b924a91736/pyhmmer-0.8.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,030   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e6/29/5a7a4bd1ada554e49d34d8050ae571e5679f80fcae115ae2e4794cfac402/pyhmmer-0.8.0-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,031   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cd/2e/5a9fdfa2fa8e7896954ae2bdceea262ed56668704d442e7b4a8f2cfca534/pyhmmer-0.8.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,031   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/18/64/3883ac90e9e1cd3826a4ba4872af387f914b6879d76cb48e2ccca4d589ed/pyhmmer-0.8.0-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,032   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cd/5e/537eab68a1a757accf9bf36fb86913427225f548bc5b721852024f0c49ab/pyhmmer-0.8.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,032   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/74/63/648053f4d3cc6fe8f86473265e709fbdac17700a2618706e2eb83d219716/pyhmmer-0.8.0-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,034   Found link https://files.pythonhosted.org/packages/0f/5c/14aaa03cfdaaf956e079eb555c17b6307858b99f1c3f80ef027dbe3910bf/pyhmmer-0.8.0.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.8.0
2023-08-16T21:05:50,034   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ed/79/dbf1e41bb908bec699f5eabb989230c8758fb8075b7e4f9c2b33108178ec/pyhmmer-0.8.1-cp310-cp310-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,035   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8c/c5/01ab9a15c9263612433b128d1e65c0ee1f3cb18b9503c8ddcacf38837914/pyhmmer-0.8.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,035   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c9/4f/9013da7fe5689a83b3200fafe885b1bed7832a93160c7f53d4851d5914eb/pyhmmer-0.8.1-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,036   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e2/5e/3d4df0d800d8be0c8f4a90d493404955fb3ff71cec1ade7bf3c032474b28/pyhmmer-0.8.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,036   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/28/46/5e13639f2d28bc37119046ddc63b6aa1b2ecc1cd911cd03c6de1bcaa2a13/pyhmmer-0.8.1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,037   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/75/ed/e314f33388b55a21b4e2ddee8b3df2a38ff806af6428dcba40415b04b997/pyhmmer-0.8.1-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,037   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/36/e0/8f7d67c887b2acbed5d598e1a8a130b627e72eaafa483bc6314061ec8e53/pyhmmer-0.8.1-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,038   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1f/27/350d8e7551a1df76c4a4c21b2194f52f442fd6da03b1a7058c8a3dfe6c38/pyhmmer-0.8.1-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,038   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6a/9f/6d6cfc59ce70e3a74bdbbef07ab0a14d6586d754404d6b8f4f7baa0bd32d/pyhmmer-0.8.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,039   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c2/93/4bc40a01c44326555939dffa0cf4c8124f62a68e6ebb55342b7b8f9d5e70/pyhmmer-0.8.1-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,039   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ac/34/f2758c62dc6bab178927c1677f19aabdff0fc663981fdeac3e6d4b75baff/pyhmmer-0.8.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,040   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9a/ea/326a14e08d354de541be7be649f769db590a1f3b536494b0dfe98ceafe60/pyhmmer-0.8.1-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,040   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f7/a5/2ab50f4c09e8d03b588bb8ffc474ba51320af2f54e08a0a8093ab4eb7778/pyhmmer-0.8.1-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,041   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/04/73/14e48a4ec9ebb3988168ba0763e8982bd7f5d6abcf375858883700e00010/pyhmmer-0.8.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,041   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/d5/30/2299b81eecc97296c8ebddc568823dea1272ae076726fc1d32f4f74a6218/pyhmmer-0.8.1-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,042   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f2/1a/daef14e72d7b7115c814a9fcc2ff6c34cd79b777221d9b374e0452724a03/pyhmmer-0.8.1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,042   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f6/fe/6568f474e66ade3d023fd9c1a9d3e9c0d612eebb13fd2abbcaa32e0c07d5/pyhmmer-0.8.1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,044   Found link https://files.pythonhosted.org/packages/3d/12/beb37509be629206b9ca05f631533271c4bc4ed4f52891f772ca1ec0219d/pyhmmer-0.8.1.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.8.1
2023-08-16T21:05:50,045   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/14/ee/272986b394c29bd06766c742c2bb717747d0f10fe27b9d639878d0b91b7b/pyhmmer-0.8.2-cp310-cp310-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,045   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/8b/7f/11a8225560199c6b92c062668c24691cfdf4d6803930ea51578c0ae0f2c6/pyhmmer-0.8.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,046   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1d/34/b23cdbe9358907f35c6cbf7af8fd223ba982372fa67842540d2a453bb6bb/pyhmmer-0.8.2-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,046   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/35/62/2dd4b543a1be28c87b20c0176c7f6c9793fec2f948c67dc4d9e15e920d74/pyhmmer-0.8.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,047   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0a/b4/d6842c31ab612714e693d13852d0b8e30877583e2c1e4c7a54e5072cf6e3/pyhmmer-0.8.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,047   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/38/04/689d911435b871b9f9beeed09997002bd8869a80efb217cd4dc12fa3be0c/pyhmmer-0.8.2-cp37-cp37m-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,048   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5d/f2/5bf9ca5b718e665b613914fa33b5299040268e289c8bd0b0794c5429981d/pyhmmer-0.8.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,048   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/19/cc/dd603f6c31b90171f2a74e8bc83cd981e3e5c9275035127f32b2e709e0c1/pyhmmer-0.8.2-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,049   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/3b/96/a3db6773bdb59ce89c4b5806de0ea3d37b07c4bf930fab20dbc60873c737/pyhmmer-0.8.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,049   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/48/aa/173348482e94cb75d7ca8140cb644583294a51c947263b075ae98d7d451c/pyhmmer-0.8.2-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,049   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/db/d7/8cbf5c5a3b14fa0ffcbf08c862f2f9e2ac6753be228af04e8feaf724b4da/pyhmmer-0.8.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,050   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1a/ee/d6c8985da391696aaa09eb694172201c1eead5f366a8e61790c735c525e9/pyhmmer-0.8.2-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,051   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/47/d9/4e2212224e53a8b9373c0831a3c16d115dce9c6e2c847c867a1f1b8284fd/pyhmmer-0.8.2-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,051   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c0/f4/28ed40514d1f483669b4f80de51a7c1770ebd84255890ea468f641ef17c4/pyhmmer-0.8.2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,052   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7f/64/845f17d9680d7703d8deaa729141dd33da734b9602cebc224a7533c0f239/pyhmmer-0.8.2-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,052   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f6/7c/17274676ff47462404c50fd7d03eb2793ab33d0405fb8830c674f29cd7e0/pyhmmer-0.8.2-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,053   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/81/6d/1fd4669db2d3a14e80bdb59377b0a537b26fb98798cbce9a4ccc2943d5b1/pyhmmer-0.8.2-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,054   Found link https://files.pythonhosted.org/packages/f1/c9/c047535dbe805d92a3d6fb8b602f19728c4c91d897a4da2f8d46f5f83cc6/pyhmmer-0.8.2.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.8.2
2023-08-16T21:05:50,055   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/98/31/4b8b4631703b3a96ba4485306568c658f9f2d5f56161c705db8f695dec71/pyhmmer-0.9.0-cp310-cp310-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,055   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/01/8f/cd5c956a65373f873d4bcebd59546abf2103f3845b81da10d7897a9cfddc/pyhmmer-0.9.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,056   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/02/99/8e05a5b9a8664b7cf8a2c59f0b7f05ada19b30354fafcf0a240bff65fd79/pyhmmer-0.9.0-cp311-cp311-macosx_10_9_universal2.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,056   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7f/61/f2da88596a2295848c7698a913f4534492e9f78382d1aa8047f158619b3c/pyhmmer-0.9.0-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,057   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ec/3c/64df043166c02805c895acd8b1843d5a0d4f76ef923600cb4043441daa59/pyhmmer-0.9.0-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,057   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/30/13/127d07fb43f4b3b2889d73a77c0181a92a278ea6aefce0f8eb0811e73c15/pyhmmer-0.9.0-cp37-cp37m-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,058   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/7e/27/d1ca91dfdca150a55265a9a3c3edc402600c5f0e8e0cc73db13d68b3f2bb/pyhmmer-0.9.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,058   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5f/aa/914bfceac46ff2285edbb90bd21e9cfd87440cc01832d83c788c079f87f1/pyhmmer-0.9.0-cp38-cp38-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,059   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/df/53/a3e0b00d22f6609e09fce8e8869b3117682ba1aad8376f38e0bc22b0f376/pyhmmer-0.9.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,059   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0f/14/50cdde7eaae89d46288e2000cfbf79c84f882a7671cf5d7b3a7f9b3a425c/pyhmmer-0.9.0-cp39-cp39-macosx_11_0_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,060   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/5f/0a/3daa61bb57b91e999fcd546a3acb9dc50920c683a9475692975f1a0059e8/pyhmmer-0.9.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,060   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/60/d5/08cc9d6e977ecf79b4cdceced482ef87bad959137b232d75f21ebf7ee4fa/pyhmmer-0.9.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,061   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f6/6e/71cab0cdd70654e1c245ae6ef4a691ceb97fbbf6cc8551c237add94b6a05/pyhmmer-0.9.0-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,061   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/6d/8f/fc5251bc0c344176a4208ab7c7f56efc67d924c8ad9b5e3e7594efef517e/pyhmmer-0.9.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,062   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/22/25/fbf2e221b90b0297df47d1688c5015fdc62c831cd4b3b689eac524bf192a/pyhmmer-0.9.0-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,062   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/47/e3/e830f6d54ae9dd2e07c6e399d18f335749bda3e2eb608682494a447c8988/pyhmmer-0.9.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,063   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4d/9c/59beb6fbc6d19cadee582a096245e042f8c59d9cf8f7770a843cf66d0636/pyhmmer-0.9.0-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,064   Found link https://files.pythonhosted.org/packages/b9/eb/dcae2181c127c3cd8334a88b56729814e1aad5eb0f76c620fe87dc6b3043/pyhmmer-0.9.0.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.9.0
2023-08-16T21:05:50,065   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/2e/aa/b519ee9195e038c4ccc1ea76acc37e4f73abffa694158a0ffcf804bc8f2a/pyhmmer-0.10.0-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,065   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/c5/4b/dd31e8ed8905a8a61090cc6c06f562c04aeda9bf44d52ebec78caee496ad/pyhmmer-0.10.0-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,066   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0e/86/f5c3b430b18f73ff33defe4e99ef575d9eb9be2d18c2976ab0554c9a3bcf/pyhmmer-0.10.0-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,066   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/a5/0d/e52925d9359cfa88c93698617aaaefcf1582c9d3e6d6c421054748353e9a/pyhmmer-0.10.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,067   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f2/66/89c65ce385dc6d3502dae12580ab30326ae33602cecf7857a59dbb5f819b/pyhmmer-0.10.0-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,067   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0a/0a/13cd5620acd71e03994d1fd25435b5b323da5c116397207d2b4f07afb023/pyhmmer-0.10.0-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,068   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/41/9b/8f85b8a37eb9f7a8de2c75352d5bb51e92b3c3932fcf50af4250c8fcf28b/pyhmmer-0.10.0-cp311-cp311-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,068   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/33/7d/8c8d4985794d4738ac5f8924bda49d1df26efaeef6e625eec9fd6390dcf7/pyhmmer-0.10.0-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,069   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/32/47/eb629f92b5d9e962a3a94bbc6c05062bb8e07bafd3f884973c84595a1fb4/pyhmmer-0.10.0-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,069   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/4c/7d/5a0db99a083cd4d16f21f44e876622c7c9219966edd570c95fec572cf927/pyhmmer-0.10.0-cp36-cp36m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,070   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/df/87/0282f4d9985335ff0f25ea0da686b03bb4d329c45f76063302573bf2f1d5/pyhmmer-0.10.0-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,070   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cd/6e/4a1991cd46e46f18c85f418a365d632ffe7eff27c27505f83acc92930e15/pyhmmer-0.10.0-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,071   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/9c/94/6aa2ca0a5461a6eb9941099d9ba8d7297f8e6d4cc0ede86cb125e34f17a4/pyhmmer-0.10.0-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,071   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/db/a6/d053ad1ea659f27a7eac41f2e2ac13a6a0ef4aa4a56f92b4d957bc457f3a/pyhmmer-0.10.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,072   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b3/e0/61f95ef5e5ad45640c867726515d8c8e9ce17dd77282d278754fc016f032/pyhmmer-0.10.0-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,072   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/45/96/33fedcdbecfd774ce0a8ef70aa6dc773fb32b0f6f5383d04072d8d75cf2e/pyhmmer-0.10.0-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,073   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/b1/88/d84d946a9119cd742eb25a617b7a4910f46cfc59abd679f2fa59aa1809a2/pyhmmer-0.10.0-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,073   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/f0/d0/56b42decb1fcebe1e8e71fa11d7db73ff6a84e1acea5ef19e185bf2049df/pyhmmer-0.10.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,074   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/64/6d/404cbb2c1e448e3590fc35612a056926ebdb129309f3b9d9f001f4867077/pyhmmer-0.10.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,074   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/87/7b/d4a20ea52d8c288ec1510decc75d083a0577313e39b08ab9b0ef8d726967/pyhmmer-0.10.0-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,075   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/0a/f3/afd94d57939f15148c1b39770eb60cd33811a6b85d1547ac69e90033d7c0/pyhmmer-0.10.0-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,075   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/cc/5f/416485375bbd88f2434fd70cbbc05df4f99c22f791b02e2dba1a9ba9e4b4/pyhmmer-0.10.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,075   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/e0/fb/8fca5facaad3ea4a00a67f45ba2e85c4f6db2a4c28110eb42d8282c00727/pyhmmer-0.10.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,076   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/71/31/61008b52db065ef37f3cdb4dddf527ac471f92e5fcc753ab520060fb0043/pyhmmer-0.10.0-pp37-pypy37_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,076   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/12/8a/6a03224be90aeb79e31ea514fb2095c3e2893bcd7a52b3e6b47c472b165e/pyhmmer-0.10.0-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,077   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/1d/b1/787f5bd85324529f3116daab59e36f76b8bf0162645881cf8b6b16c95d10/pyhmmer-0.10.0-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,077   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/fd/f9/5ecd9818d759d088ad9bbb4a1bb0112ebdc276937d09649b535b715b4e90/pyhmmer-0.10.0-pp38-pypy38_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,078   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/17/ce/f770d4b8929f913ef63d7365797f0e6880f25f54097485d1a082be3f7433/pyhmmer-0.10.0-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,078   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/55/4e/6b532964a8c5024cc0711366642fba672ccac714a9326972f4c0c7847f9f/pyhmmer-0.10.0-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,079   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/ef/c4/7a84afa9a2fb98934174212b2ab3c4653729e90881569f3f191c3bd97e32/pyhmmer-0.10.0-pp39-pypy39_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,079   Skipping link: No binaries permitted for pyhmmer: https://files.pythonhosted.org/packages/43/b5/8372c730e4acddd8124e905723ce50964c92326f8410c46d6a6890d7df34/pyhmmer-0.10.0-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6)
2023-08-16T21:05:50,081   Found link https://files.pythonhosted.org/packages/0a/5e/d60700a6ddeb5f27f778b9a63b1646d75993bb17bdec97fd78530b7931f3/pyhmmer-0.10.0.tar.gz (from https://pypi.org/simple/pyhmmer/) (requires-python:>=3.6), version: 0.10.0
2023-08-16T21:05:50,082 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyhmmer/
2023-08-16T21:05:50,083 Getting page https://www.piwheels.org/simple/pyhmmer/
2023-08-16T21:05:50,085 Found index url https://www.piwheels.org/simple/
2023-08-16T21:05:50,304 Fetched page https://www.piwheels.org/simple/pyhmmer/ as text/html
2023-08-16T21:05:50,306 Skipping link: not a file: https://www.piwheels.org/simple/pyhmmer/
2023-08-16T21:05:50,307 Skipping link: not a file: https://pypi.org/simple/pyhmmer/
2023-08-16T21:05:50,355 Given no hashes to check 1 links for project 'pyhmmer': discarding no candidates
2023-08-16T21:05:50,386 Collecting pyhmmer==0.10.0
2023-08-16T21:05:50,390   Created temporary directory: /tmp/pip-unpack-2y7h2kxb
2023-08-16T21:05:50,494   Downloading pyhmmer-0.10.0.tar.gz (11.1 MB)
2023-08-16T21:06:00,086   Added pyhmmer==0.10.0 from https://files.pythonhosted.org/packages/0a/5e/d60700a6ddeb5f27f778b9a63b1646d75993bb17bdec97fd78530b7931f3/pyhmmer-0.10.0.tar.gz to build tracker '/tmp/pip-build-tracker-j3gqxiv2'
2023-08-16T21:06:00,096   Created temporary directory: /tmp/pip-build-env-pxa_z6he
2023-08-16T21:06:00,118   Installing build dependencies: started
2023-08-16T21:06:00,120   Running command pip subprocess to install build dependencies
2023-08-16T21:06:02,829   Using pip 23.1.2 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7)
2023-08-16T21:06:03,699   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-08-16T21:06:05,583     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/b8/49/b3b29c52b09075fb77f69309763a563b4054d5808a3f3b95df3a62ef3d3f/setuptools-68.1.0-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2023-08-16T21:06:05,586     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/83/b0/18310b45f6eec3757c0554dbc1e03f2f7685c8a87831aea6adc1276faacc/setuptools-68.1.0.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2023-08-16T21:06:06,192     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/setuptools/setuptools-68.1.0-py3-none-any.whl#sha256=0637a8df7f9d79ffffa7010fdd3db5ca70836acda6994af5f7edb9524838aa23 (from https://www.piwheels.org/simple/setuptools/) (requires-python:>=3.8)
2023-08-16T21:06:07,637   Collecting setuptools>=46.4
2023-08-16T21:06:07,825     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB)
2023-08-16T21:06:11,408   Collecting cython~=3.0
2023-08-16T21:06:12,269     Using cached https://www.piwheels.org/simple/cython/Cython-3.0.0-cp37-cp37m-linux_armv7l.whl (4.3 MB)
2023-08-16T21:06:18,908   Installing collected packages: setuptools, cython
2023-08-16T21:06:29,161     Creating /tmp/pip-build-env-pxa_z6he/overlay/bin
2023-08-16T21:06:29,166     changing mode of /tmp/pip-build-env-pxa_z6he/overlay/bin/cygdb to 755
2023-08-16T21:06:29,172     changing mode of /tmp/pip-build-env-pxa_z6he/overlay/bin/cython to 755
2023-08-16T21:06:29,177     changing mode of /tmp/pip-build-env-pxa_z6he/overlay/bin/cythonize to 755
2023-08-16T21:06:29,223   Successfully installed cython-3.0.0 setuptools-68.0.0

2023-08-16T21:06:29,257   [notice] A new release of pip is available: 23.1.2 -> 23.2.1
2023-08-16T21:06:29,257   [notice] To update, run: python3 -m pip install --upgrade pip
2023-08-16T21:06:29,780   Installing build dependencies: finished with status 'done'
2023-08-16T21:06:29,791   Getting requirements to build wheel: started
2023-08-16T21:06:29,793   Running command Getting requirements to build wheel
2023-08-16T21:06:31,918   Getting requirements to build wheel: finished with status 'done'
2023-08-16T21:06:31,954   Installing backend dependencies: started
2023-08-16T21:06:31,956   Running command pip subprocess to install backend dependencies
2023-08-16T21:06:34,671   Using pip 23.1.2 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7)
2023-08-16T21:06:35,553   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-08-16T21:06:36,592   Collecting wheel
2023-08-16T21:06:36,631     Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.1-py3-none-any.whl (64 kB)
2023-08-16T21:06:42,163   Installing collected packages: wheel
2023-08-16T21:06:42,613     Creating /tmp/pip-build-env-pxa_z6he/normal/bin
2023-08-16T21:06:42,618     changing mode of /tmp/pip-build-env-pxa_z6he/normal/bin/wheel to 755
2023-08-16T21:06:42,645   Successfully installed wheel-0.41.1

2023-08-16T21:06:42,677   [notice] A new release of pip is available: 23.1.2 -> 23.2.1
2023-08-16T21:06:42,678   [notice] To update, run: python3 -m pip install --upgrade pip
2023-08-16T21:06:43,044   Installing backend dependencies: finished with status 'done'
2023-08-16T21:06:43,049   Created temporary directory: /tmp/pip-modern-metadata-0r9ukyzi
2023-08-16T21:06:43,056   Preparing metadata (pyproject.toml): started
2023-08-16T21:06:43,058   Running command Preparing metadata (pyproject.toml)
2023-08-16T21:06:45,105   running dist_info
2023-08-16T21:06:45,133   creating /tmp/pip-modern-metadata-0r9ukyzi/pyhmmer.egg-info
2023-08-16T21:06:45,142   writing /tmp/pip-modern-metadata-0r9ukyzi/pyhmmer.egg-info/PKG-INFO
2023-08-16T21:06:45,149   writing dependency_links to /tmp/pip-modern-metadata-0r9ukyzi/pyhmmer.egg-info/dependency_links.txt
2023-08-16T21:06:45,153   writing requirements to /tmp/pip-modern-metadata-0r9ukyzi/pyhmmer.egg-info/requires.txt
2023-08-16T21:06:45,155   writing top-level names to /tmp/pip-modern-metadata-0r9ukyzi/pyhmmer.egg-info/top_level.txt
2023-08-16T21:06:45,157   writing manifest file '/tmp/pip-modern-metadata-0r9ukyzi/pyhmmer.egg-info/SOURCES.txt'
2023-08-16T21:06:45,267   reading manifest file '/tmp/pip-modern-metadata-0r9ukyzi/pyhmmer.egg-info/SOURCES.txt'
2023-08-16T21:06:45,271   reading manifest template 'MANIFEST.in'
2023-08-16T21:06:46,538   warning: no previously-included files matching '*.ai' found under directory 'vendor/hmmer'
2023-08-16T21:06:46,543   warning: no previously-included files matching '*.pl' found under directory 'vendor'
2023-08-16T21:06:46,546   no previously-included directories found matching 'vendor/easel/demotic'
2023-08-16T21:06:46,550   no previously-included directories found matching 'vendor/easel/documentation'
2023-08-16T21:06:46,554   no previously-included directories found matching 'vendor/easel/esl_msa_testfiles'
2023-08-16T21:06:46,557   no previously-included directories found matching 'vendor/easel/miniapps'
2023-08-16T21:06:46,561   no previously-included directories found matching 'vendor/easel/testsuite'
2023-08-16T21:06:46,564   no previously-included directories found matching 'vendor/hmmer/autobuild'
2023-08-16T21:06:46,568   no previously-included directories found matching 'vendor/hmmer/documentation'
2023-08-16T21:06:46,571   no previously-included directories found matching 'vendor/hmmer/contrib'
2023-08-16T21:06:46,574   no previously-included directories found matching 'vendor/hmmer/profmark'
2023-08-16T21:06:46,578   no previously-included directories found matching 'vendor/hmmer/testsuite'
2023-08-16T21:06:46,581   no previously-included directories found matching 'vendor/hmmer/test-speed'
2023-08-16T21:06:46,585   no previously-included directories found matching 'vendor/hmmer/tutorial'
2023-08-16T21:06:46,585   adding license file 'COPYING'
2023-08-16T21:06:46,663   writing manifest file '/tmp/pip-modern-metadata-0r9ukyzi/pyhmmer.egg-info/SOURCES.txt'
2023-08-16T21:06:46,666   creating '/tmp/pip-modern-metadata-0r9ukyzi/pyhmmer-0.10.0.dist-info'
2023-08-16T21:06:47,013   Preparing metadata (pyproject.toml): finished with status 'done'
2023-08-16T21:06:47,030   Source in /tmp/pip-wheel-p5zj6839/pyhmmer_7ad4561a035148b180d807096286ff47 has version 0.10.0, which satisfies requirement pyhmmer==0.10.0 from https://files.pythonhosted.org/packages/0a/5e/d60700a6ddeb5f27f778b9a63b1646d75993bb17bdec97fd78530b7931f3/pyhmmer-0.10.0.tar.gz
2023-08-16T21:06:47,032   Removed pyhmmer==0.10.0 from https://files.pythonhosted.org/packages/0a/5e/d60700a6ddeb5f27f778b9a63b1646d75993bb17bdec97fd78530b7931f3/pyhmmer-0.10.0.tar.gz from build tracker '/tmp/pip-build-tracker-j3gqxiv2'
2023-08-16T21:06:47,050 Created temporary directory: /tmp/pip-unpack-fkjidksa
2023-08-16T21:06:47,052 Building wheels for collected packages: pyhmmer
2023-08-16T21:06:47,061   Created temporary directory: /tmp/pip-wheel-lqb7w667
2023-08-16T21:06:47,062   Destination directory: /tmp/pip-wheel-lqb7w667
2023-08-16T21:06:47,067   Building wheel for pyhmmer (pyproject.toml): started
2023-08-16T21:06:47,069   Running command Building wheel for pyhmmer (pyproject.toml)
2023-08-16T21:06:49,170   running bdist_wheel
2023-08-16T21:06:49,231   running build
2023-08-16T21:06:49,231   running build_py
2023-08-16T21:06:49,249   creating build
2023-08-16T21:06:49,250   creating build/lib.linux-armv7l-cpython-37
2023-08-16T21:06:49,252   creating build/lib.linux-armv7l-cpython-37/pyhmmer
2023-08-16T21:06:49,254   copying pyhmmer/__init__.py -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-08-16T21:06:49,258   copying pyhmmer/utils.py -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-08-16T21:06:49,261   copying pyhmmer/hmmer.py -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-08-16T21:06:49,270   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests
2023-08-16T21:06:49,272   copying pyhmmer/tests/__init__.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests
2023-08-16T21:06:49,275   copying pyhmmer/tests/utils.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests
2023-08-16T21:06:49,279   copying pyhmmer/tests/test_errors.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests
2023-08-16T21:06:49,282   copying pyhmmer/tests/test_hmmer.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests
2023-08-16T21:06:49,288   copying pyhmmer/tests/test_doctest.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests
2023-08-16T21:06:49,295   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-08-16T21:06:49,296   copying pyhmmer/tests/test_plan7/test_optimizedprofile.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-08-16T21:06:49,300   copying pyhmmer/tests/test_plan7/test_pipeline.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-08-16T21:06:49,305   copying pyhmmer/tests/test_plan7/test_hit.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-08-16T21:06:49,309   copying pyhmmer/tests/test_plan7/__init__.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-08-16T21:06:49,312   copying pyhmmer/tests/test_plan7/test_hmmfile.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-08-16T21:06:49,317   copying pyhmmer/tests/test_plan7/test_hmm.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-08-16T21:06:49,321   copying pyhmmer/tests/test_plan7/test_tophits.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-08-16T21:06:49,326   copying pyhmmer/tests/test_plan7/test_traces.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-08-16T21:06:49,330   copying pyhmmer/tests/test_plan7/test_profile.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-08-16T21:06:49,334   copying pyhmmer/tests/test_plan7/test_builder.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-08-16T21:06:49,339   copying pyhmmer/tests/test_plan7/test_background.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-08-16T21:06:49,343   copying pyhmmer/tests/test_plan7/test_tracealigner.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-08-16T21:06:49,347   copying pyhmmer/tests/test_plan7/test_block.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7
2023-08-16T21:06:49,355   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-08-16T21:06:49,357   copying pyhmmer/tests/test_easel/test_matrix.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-08-16T21:06:49,362   copying pyhmmer/tests/test_easel/test_sequence.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-08-16T21:06:49,367   copying pyhmmer/tests/test_easel/__init__.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-08-16T21:06:49,371   copying pyhmmer/tests/test_easel/test_msafile.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-08-16T21:06:49,377   copying pyhmmer/tests/test_easel/test_vector.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-08-16T21:06:49,382   copying pyhmmer/tests/test_easel/test_randomness.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-08-16T21:06:49,386   copying pyhmmer/tests/test_easel/test_bitfield.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-08-16T21:06:49,390   copying pyhmmer/tests/test_easel/test_alphabet.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-08-16T21:06:49,394   copying pyhmmer/tests/test_easel/test_sequencefile.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-08-16T21:06:49,399   copying pyhmmer/tests/test_easel/test_gencode.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-08-16T21:06:49,402   copying pyhmmer/tests/test_easel/test_ssi.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-08-16T21:06:49,406   copying pyhmmer/tests/test_easel/test_msa.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-08-16T21:06:49,410   copying pyhmmer/tests/test_easel/test_keyhash.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-08-16T21:06:49,414   copying pyhmmer/tests/test_easel/test_block.py -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel
2023-08-16T21:06:49,418   running egg_info
2023-08-16T21:06:49,428   writing pyhmmer.egg-info/PKG-INFO
2023-08-16T21:06:49,433   writing dependency_links to pyhmmer.egg-info/dependency_links.txt
2023-08-16T21:06:49,437   writing requirements to pyhmmer.egg-info/requires.txt
2023-08-16T21:06:49,440   writing top-level names to pyhmmer.egg-info/top_level.txt
2023-08-16T21:06:49,478   reading manifest file 'pyhmmer.egg-info/SOURCES.txt'
2023-08-16T21:06:49,526   reading manifest template 'MANIFEST.in'
2023-08-16T21:06:50,849   warning: no previously-included files matching '*.ai' found under directory 'vendor/hmmer'
2023-08-16T21:06:50,857   warning: no previously-included files matching '*.pl' found under directory 'vendor'
2023-08-16T21:06:50,862   no previously-included directories found matching 'vendor/easel/demotic'
2023-08-16T21:06:50,868   no previously-included directories found matching 'vendor/easel/documentation'
2023-08-16T21:06:50,873   no previously-included directories found matching 'vendor/easel/esl_msa_testfiles'
2023-08-16T21:06:50,878   no previously-included directories found matching 'vendor/easel/miniapps'
2023-08-16T21:06:50,884   no previously-included directories found matching 'vendor/easel/testsuite'
2023-08-16T21:06:50,889   no previously-included directories found matching 'vendor/hmmer/autobuild'
2023-08-16T21:06:50,894   no previously-included directories found matching 'vendor/hmmer/documentation'
2023-08-16T21:06:50,899   no previously-included directories found matching 'vendor/hmmer/contrib'
2023-08-16T21:06:50,904   no previously-included directories found matching 'vendor/hmmer/profmark'
2023-08-16T21:06:50,909   no previously-included directories found matching 'vendor/hmmer/testsuite'
2023-08-16T21:06:50,915   no previously-included directories found matching 'vendor/hmmer/test-speed'
2023-08-16T21:06:50,920   no previously-included directories found matching 'vendor/hmmer/tutorial'
2023-08-16T21:06:50,920   adding license file 'COPYING'
2023-08-16T21:06:51,024   writing manifest file 'pyhmmer.egg-info/SOURCES.txt'
2023-08-16T21:06:51,046   /tmp/pip-build-env-pxa_z6he/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.fileobj' is absent from the `packages` configuration.
2023-08-16T21:06:51,046   !!

2023-08-16T21:06:51,047           ********************************************************************************
2023-08-16T21:06:51,047           ############################
2023-08-16T21:06:51,047           # Package would be ignored #
2023-08-16T21:06:51,048           ############################
2023-08-16T21:06:51,048           Python recognizes 'pyhmmer.fileobj' as an importable package[^1],
2023-08-16T21:06:51,048           but it is absent from setuptools' `packages` configuration.

2023-08-16T21:06:51,049           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-16T21:06:51,049           package, please make sure that 'pyhmmer.fileobj' is explicitly added
2023-08-16T21:06:51,049           to the `packages` configuration field.

2023-08-16T21:06:51,050           Alternatively, you can also rely on setuptools' discovery methods
2023-08-16T21:06:51,050           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-16T21:06:51,051           instead of `find_packages(...)`/`find:`).

2023-08-16T21:06:51,051           You can read more about "package discovery" on setuptools documentation page:

2023-08-16T21:06:51,052           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-16T21:06:51,053           If you don't want 'pyhmmer.fileobj' to be distributed and are
2023-08-16T21:06:51,053           already explicitly excluding 'pyhmmer.fileobj' via
2023-08-16T21:06:51,053           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-16T21:06:51,053           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-16T21:06:51,054           combination with a more fine grained `package-data` configuration.

2023-08-16T21:06:51,054           You can read more about "package data files" on setuptools documentation page:

2023-08-16T21:06:51,055           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-16T21:06:51,056           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-16T21:06:51,056                 even if it does not contain any `.py` files.
2023-08-16T21:06:51,056                 On the other hand, currently there is no concept of package data
2023-08-16T21:06:51,057                 directory, all directories are treated like packages.
2023-08-16T21:06:51,057           ********************************************************************************

2023-08-16T21:06:51,058   !!
2023-08-16T21:06:51,058     check.warn(importable)
2023-08-16T21:06:51,058   /tmp/pip-build-env-pxa_z6he/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.reexports' is absent from the `packages` configuration.
2023-08-16T21:06:51,058   !!

2023-08-16T21:06:51,059           ********************************************************************************
2023-08-16T21:06:51,059           ############################
2023-08-16T21:06:51,060           # Package would be ignored #
2023-08-16T21:06:51,060           ############################
2023-08-16T21:06:51,060           Python recognizes 'pyhmmer.reexports' as an importable package[^1],
2023-08-16T21:06:51,061           but it is absent from setuptools' `packages` configuration.

2023-08-16T21:06:51,061           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-16T21:06:51,062           package, please make sure that 'pyhmmer.reexports' is explicitly added
2023-08-16T21:06:51,062           to the `packages` configuration field.

2023-08-16T21:06:51,062           Alternatively, you can also rely on setuptools' discovery methods
2023-08-16T21:06:51,063           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-16T21:06:51,063           instead of `find_packages(...)`/`find:`).

2023-08-16T21:06:51,064           You can read more about "package discovery" on setuptools documentation page:

2023-08-16T21:06:51,064           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-16T21:06:51,065           If you don't want 'pyhmmer.reexports' to be distributed and are
2023-08-16T21:06:51,065           already explicitly excluding 'pyhmmer.reexports' via
2023-08-16T21:06:51,065           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-16T21:06:51,066           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-16T21:06:51,066           combination with a more fine grained `package-data` configuration.

2023-08-16T21:06:51,067           You can read more about "package data files" on setuptools documentation page:

2023-08-16T21:06:51,067           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-16T21:06:51,068           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-16T21:06:51,068                 even if it does not contain any `.py` files.
2023-08-16T21:06:51,068                 On the other hand, currently there is no concept of package data
2023-08-16T21:06:51,069                 directory, all directories are treated like packages.
2023-08-16T21:06:51,069           ********************************************************************************

2023-08-16T21:06:51,070   !!
2023-08-16T21:06:51,070     check.warn(importable)
2023-08-16T21:06:51,070   /tmp/pip-build-env-pxa_z6he/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data' is absent from the `packages` configuration.
2023-08-16T21:06:51,071   !!

2023-08-16T21:06:51,071           ********************************************************************************
2023-08-16T21:06:51,071           ############################
2023-08-16T21:06:51,072           # Package would be ignored #
2023-08-16T21:06:51,072           ############################
2023-08-16T21:06:51,072           Python recognizes 'pyhmmer.tests.data' as an importable package[^1],
2023-08-16T21:06:51,073           but it is absent from setuptools' `packages` configuration.

2023-08-16T21:06:51,073           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-16T21:06:51,073           package, please make sure that 'pyhmmer.tests.data' is explicitly added
2023-08-16T21:06:51,074           to the `packages` configuration field.

2023-08-16T21:06:51,074           Alternatively, you can also rely on setuptools' discovery methods
2023-08-16T21:06:51,075           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-16T21:06:51,075           instead of `find_packages(...)`/`find:`).

2023-08-16T21:06:51,075           You can read more about "package discovery" on setuptools documentation page:

2023-08-16T21:06:51,076           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-16T21:06:51,077           If you don't want 'pyhmmer.tests.data' to be distributed and are
2023-08-16T21:06:51,077           already explicitly excluding 'pyhmmer.tests.data' via
2023-08-16T21:06:51,077           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-16T21:06:51,077           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-16T21:06:51,078           combination with a more fine grained `package-data` configuration.

2023-08-16T21:06:51,078           You can read more about "package data files" on setuptools documentation page:

2023-08-16T21:06:51,079           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-16T21:06:51,080           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-16T21:06:51,080                 even if it does not contain any `.py` files.
2023-08-16T21:06:51,080                 On the other hand, currently there is no concept of package data
2023-08-16T21:06:51,081                 directory, all directories are treated like packages.
2023-08-16T21:06:51,081           ********************************************************************************

2023-08-16T21:06:51,081   !!
2023-08-16T21:06:51,082     check.warn(importable)
2023-08-16T21:06:51,082   /tmp/pip-build-env-pxa_z6he/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data.hmms' is absent from the `packages` configuration.
2023-08-16T21:06:51,082   !!

2023-08-16T21:06:51,083           ********************************************************************************
2023-08-16T21:06:51,083           ############################
2023-08-16T21:06:51,083           # Package would be ignored #
2023-08-16T21:06:51,084           ############################
2023-08-16T21:06:51,084           Python recognizes 'pyhmmer.tests.data.hmms' as an importable package[^1],
2023-08-16T21:06:51,084           but it is absent from setuptools' `packages` configuration.

2023-08-16T21:06:51,085           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-16T21:06:51,085           package, please make sure that 'pyhmmer.tests.data.hmms' is explicitly added
2023-08-16T21:06:51,085           to the `packages` configuration field.

2023-08-16T21:06:51,086           Alternatively, you can also rely on setuptools' discovery methods
2023-08-16T21:06:51,086           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-16T21:06:51,087           instead of `find_packages(...)`/`find:`).

2023-08-16T21:06:51,087           You can read more about "package discovery" on setuptools documentation page:

2023-08-16T21:06:51,088           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-16T21:06:51,088           If you don't want 'pyhmmer.tests.data.hmms' to be distributed and are
2023-08-16T21:06:51,088           already explicitly excluding 'pyhmmer.tests.data.hmms' via
2023-08-16T21:06:51,089           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-16T21:06:51,089           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-16T21:06:51,089           combination with a more fine grained `package-data` configuration.

2023-08-16T21:06:51,090           You can read more about "package data files" on setuptools documentation page:

2023-08-16T21:06:51,090           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-16T21:06:51,091           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-16T21:06:51,092                 even if it does not contain any `.py` files.
2023-08-16T21:06:51,092                 On the other hand, currently there is no concept of package data
2023-08-16T21:06:51,092                 directory, all directories are treated like packages.
2023-08-16T21:06:51,093           ********************************************************************************

2023-08-16T21:06:51,093   !!
2023-08-16T21:06:51,093     check.warn(importable)
2023-08-16T21:06:51,094   /tmp/pip-build-env-pxa_z6he/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data.hmms.bin' is absent from the `packages` configuration.
2023-08-16T21:06:51,094   !!

2023-08-16T21:06:51,095           ********************************************************************************
2023-08-16T21:06:51,095           ############################
2023-08-16T21:06:51,095           # Package would be ignored #
2023-08-16T21:06:51,096           ############################
2023-08-16T21:06:51,096           Python recognizes 'pyhmmer.tests.data.hmms.bin' as an importable package[^1],
2023-08-16T21:06:51,096           but it is absent from setuptools' `packages` configuration.

2023-08-16T21:06:51,097           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-16T21:06:51,097           package, please make sure that 'pyhmmer.tests.data.hmms.bin' is explicitly added
2023-08-16T21:06:51,097           to the `packages` configuration field.

2023-08-16T21:06:51,098           Alternatively, you can also rely on setuptools' discovery methods
2023-08-16T21:06:51,098           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-16T21:06:51,098           instead of `find_packages(...)`/`find:`).

2023-08-16T21:06:51,099           You can read more about "package discovery" on setuptools documentation page:

2023-08-16T21:06:51,099           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-16T21:06:51,100           If you don't want 'pyhmmer.tests.data.hmms.bin' to be distributed and are
2023-08-16T21:06:51,100           already explicitly excluding 'pyhmmer.tests.data.hmms.bin' via
2023-08-16T21:06:51,101           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-16T21:06:51,101           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-16T21:06:51,101           combination with a more fine grained `package-data` configuration.

2023-08-16T21:06:51,102           You can read more about "package data files" on setuptools documentation page:

2023-08-16T21:06:51,102           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-16T21:06:51,103           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-16T21:06:51,104                 even if it does not contain any `.py` files.
2023-08-16T21:06:51,104                 On the other hand, currently there is no concept of package data
2023-08-16T21:06:51,104                 directory, all directories are treated like packages.
2023-08-16T21:06:51,104           ********************************************************************************

2023-08-16T21:06:51,105   !!
2023-08-16T21:06:51,105     check.warn(importable)
2023-08-16T21:06:51,106   /tmp/pip-build-env-pxa_z6he/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data.hmms.db' is absent from the `packages` configuration.
2023-08-16T21:06:51,106   !!

2023-08-16T21:06:51,106           ********************************************************************************
2023-08-16T21:06:51,107           ############################
2023-08-16T21:06:51,107           # Package would be ignored #
2023-08-16T21:06:51,107           ############################
2023-08-16T21:06:51,108           Python recognizes 'pyhmmer.tests.data.hmms.db' as an importable package[^1],
2023-08-16T21:06:51,108           but it is absent from setuptools' `packages` configuration.

2023-08-16T21:06:51,108           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-16T21:06:51,109           package, please make sure that 'pyhmmer.tests.data.hmms.db' is explicitly added
2023-08-16T21:06:51,109           to the `packages` configuration field.

2023-08-16T21:06:51,109           Alternatively, you can also rely on setuptools' discovery methods
2023-08-16T21:06:51,110           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-16T21:06:51,110           instead of `find_packages(...)`/`find:`).

2023-08-16T21:06:51,111           You can read more about "package discovery" on setuptools documentation page:

2023-08-16T21:06:51,111           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-16T21:06:51,112           If you don't want 'pyhmmer.tests.data.hmms.db' to be distributed and are
2023-08-16T21:06:51,112           already explicitly excluding 'pyhmmer.tests.data.hmms.db' via
2023-08-16T21:06:51,112           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-16T21:06:51,113           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-16T21:06:51,113           combination with a more fine grained `package-data` configuration.

2023-08-16T21:06:51,114           You can read more about "package data files" on setuptools documentation page:

2023-08-16T21:06:51,114           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-16T21:06:51,115           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-16T21:06:51,115                 even if it does not contain any `.py` files.
2023-08-16T21:06:51,116                 On the other hand, currently there is no concept of package data
2023-08-16T21:06:51,116                 directory, all directories are treated like packages.
2023-08-16T21:06:51,116           ********************************************************************************

2023-08-16T21:06:51,117   !!
2023-08-16T21:06:51,117     check.warn(importable)
2023-08-16T21:06:51,117   /tmp/pip-build-env-pxa_z6he/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data.hmms.txt' is absent from the `packages` configuration.
2023-08-16T21:06:51,118   !!

2023-08-16T21:06:51,118           ********************************************************************************
2023-08-16T21:06:51,118           ############################
2023-08-16T21:06:51,119           # Package would be ignored #
2023-08-16T21:06:51,119           ############################
2023-08-16T21:06:51,119           Python recognizes 'pyhmmer.tests.data.hmms.txt' as an importable package[^1],
2023-08-16T21:06:51,120           but it is absent from setuptools' `packages` configuration.

2023-08-16T21:06:51,120           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-16T21:06:51,121           package, please make sure that 'pyhmmer.tests.data.hmms.txt' is explicitly added
2023-08-16T21:06:51,121           to the `packages` configuration field.

2023-08-16T21:06:51,122           Alternatively, you can also rely on setuptools' discovery methods
2023-08-16T21:06:51,122           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-16T21:06:51,122           instead of `find_packages(...)`/`find:`).

2023-08-16T21:06:51,123           You can read more about "package discovery" on setuptools documentation page:

2023-08-16T21:06:51,123           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-16T21:06:51,124           If you don't want 'pyhmmer.tests.data.hmms.txt' to be distributed and are
2023-08-16T21:06:51,124           already explicitly excluding 'pyhmmer.tests.data.hmms.txt' via
2023-08-16T21:06:51,124           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-16T21:06:51,125           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-16T21:06:51,125           combination with a more fine grained `package-data` configuration.

2023-08-16T21:06:51,125           You can read more about "package data files" on setuptools documentation page:

2023-08-16T21:06:51,126           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-16T21:06:51,127           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-16T21:06:51,127                 even if it does not contain any `.py` files.
2023-08-16T21:06:51,127                 On the other hand, currently there is no concept of package data
2023-08-16T21:06:51,128                 directory, all directories are treated like packages.
2023-08-16T21:06:51,128           ********************************************************************************

2023-08-16T21:06:51,129   !!
2023-08-16T21:06:51,129     check.warn(importable)
2023-08-16T21:06:51,129   /tmp/pip-build-env-pxa_z6he/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data.hmms.txt2' is absent from the `packages` configuration.
2023-08-16T21:06:51,129   !!

2023-08-16T21:06:51,130           ********************************************************************************
2023-08-16T21:06:51,130           ############################
2023-08-16T21:06:51,131           # Package would be ignored #
2023-08-16T21:06:51,131           ############################
2023-08-16T21:06:51,131           Python recognizes 'pyhmmer.tests.data.hmms.txt2' as an importable package[^1],
2023-08-16T21:06:51,131           but it is absent from setuptools' `packages` configuration.

2023-08-16T21:06:51,132           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-16T21:06:51,132           package, please make sure that 'pyhmmer.tests.data.hmms.txt2' is explicitly added
2023-08-16T21:06:51,133           to the `packages` configuration field.

2023-08-16T21:06:51,133           Alternatively, you can also rely on setuptools' discovery methods
2023-08-16T21:06:51,133           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-16T21:06:51,134           instead of `find_packages(...)`/`find:`).

2023-08-16T21:06:51,134           You can read more about "package discovery" on setuptools documentation page:

2023-08-16T21:06:51,135           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-16T21:06:51,135           If you don't want 'pyhmmer.tests.data.hmms.txt2' to be distributed and are
2023-08-16T21:06:51,136           already explicitly excluding 'pyhmmer.tests.data.hmms.txt2' via
2023-08-16T21:06:51,136           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-16T21:06:51,136           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-16T21:06:51,137           combination with a more fine grained `package-data` configuration.

2023-08-16T21:06:51,137           You can read more about "package data files" on setuptools documentation page:

2023-08-16T21:06:51,138           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-16T21:06:51,139           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-16T21:06:51,139                 even if it does not contain any `.py` files.
2023-08-16T21:06:51,139                 On the other hand, currently there is no concept of package data
2023-08-16T21:06:51,140                 directory, all directories are treated like packages.
2023-08-16T21:06:51,140           ********************************************************************************

2023-08-16T21:06:51,141   !!
2023-08-16T21:06:51,142     check.warn(importable)
2023-08-16T21:06:51,142   /tmp/pip-build-env-pxa_z6he/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data.jackhmmer' is absent from the `packages` configuration.
2023-08-16T21:06:51,142   !!

2023-08-16T21:06:51,143           ********************************************************************************
2023-08-16T21:06:51,143           ############################
2023-08-16T21:06:51,144           # Package would be ignored #
2023-08-16T21:06:51,144           ############################
2023-08-16T21:06:51,144           Python recognizes 'pyhmmer.tests.data.jackhmmer' as an importable package[^1],
2023-08-16T21:06:51,145           but it is absent from setuptools' `packages` configuration.

2023-08-16T21:06:51,145           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-16T21:06:51,146           package, please make sure that 'pyhmmer.tests.data.jackhmmer' is explicitly added
2023-08-16T21:06:51,146           to the `packages` configuration field.

2023-08-16T21:06:51,147           Alternatively, you can also rely on setuptools' discovery methods
2023-08-16T21:06:51,147           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-16T21:06:51,148           instead of `find_packages(...)`/`find:`).

2023-08-16T21:06:51,148           You can read more about "package discovery" on setuptools documentation page:

2023-08-16T21:06:51,149           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-16T21:06:51,149           If you don't want 'pyhmmer.tests.data.jackhmmer' to be distributed and are
2023-08-16T21:06:51,150           already explicitly excluding 'pyhmmer.tests.data.jackhmmer' via
2023-08-16T21:06:51,151           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-16T21:06:51,151           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-16T21:06:51,151           combination with a more fine grained `package-data` configuration.

2023-08-16T21:06:51,152           You can read more about "package data files" on setuptools documentation page:

2023-08-16T21:06:51,153           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-16T21:06:51,154           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-16T21:06:51,154                 even if it does not contain any `.py` files.
2023-08-16T21:06:51,154                 On the other hand, currently there is no concept of package data
2023-08-16T21:06:51,155                 directory, all directories are treated like packages.
2023-08-16T21:06:51,155           ********************************************************************************

2023-08-16T21:06:51,156   !!
2023-08-16T21:06:51,157     check.warn(importable)
2023-08-16T21:06:51,157   /tmp/pip-build-env-pxa_z6he/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data.msa' is absent from the `packages` configuration.
2023-08-16T21:06:51,157   !!

2023-08-16T21:06:51,158           ********************************************************************************
2023-08-16T21:06:51,158           ############################
2023-08-16T21:06:51,159           # Package would be ignored #
2023-08-16T21:06:51,159           ############################
2023-08-16T21:06:51,159           Python recognizes 'pyhmmer.tests.data.msa' as an importable package[^1],
2023-08-16T21:06:51,160           but it is absent from setuptools' `packages` configuration.

2023-08-16T21:06:51,160           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-16T21:06:51,161           package, please make sure that 'pyhmmer.tests.data.msa' is explicitly added
2023-08-16T21:06:51,161           to the `packages` configuration field.

2023-08-16T21:06:51,162           Alternatively, you can also rely on setuptools' discovery methods
2023-08-16T21:06:51,163           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-16T21:06:51,163           instead of `find_packages(...)`/`find:`).

2023-08-16T21:06:51,164           You can read more about "package discovery" on setuptools documentation page:

2023-08-16T21:06:51,164           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-16T21:06:51,165           If you don't want 'pyhmmer.tests.data.msa' to be distributed and are
2023-08-16T21:06:51,165           already explicitly excluding 'pyhmmer.tests.data.msa' via
2023-08-16T21:06:51,165           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-16T21:06:51,166           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-16T21:06:51,166           combination with a more fine grained `package-data` configuration.

2023-08-16T21:06:51,167           You can read more about "package data files" on setuptools documentation page:

2023-08-16T21:06:51,168           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-16T21:06:51,169           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-16T21:06:51,169                 even if it does not contain any `.py` files.
2023-08-16T21:06:51,170                 On the other hand, currently there is no concept of package data
2023-08-16T21:06:51,170                 directory, all directories are treated like packages.
2023-08-16T21:06:51,170           ********************************************************************************

2023-08-16T21:06:51,171   !!
2023-08-16T21:06:51,171     check.warn(importable)
2023-08-16T21:06:51,172   /tmp/pip-build-env-pxa_z6he/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data.seqs' is absent from the `packages` configuration.
2023-08-16T21:06:51,172   !!

2023-08-16T21:06:51,173           ********************************************************************************
2023-08-16T21:06:51,173           ############################
2023-08-16T21:06:51,173           # Package would be ignored #
2023-08-16T21:06:51,174           ############################
2023-08-16T21:06:51,174           Python recognizes 'pyhmmer.tests.data.seqs' as an importable package[^1],
2023-08-16T21:06:51,174           but it is absent from setuptools' `packages` configuration.

2023-08-16T21:06:51,175           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-16T21:06:51,175           package, please make sure that 'pyhmmer.tests.data.seqs' is explicitly added
2023-08-16T21:06:51,175           to the `packages` configuration field.

2023-08-16T21:06:51,176           Alternatively, you can also rely on setuptools' discovery methods
2023-08-16T21:06:51,176           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-16T21:06:51,177           instead of `find_packages(...)`/`find:`).

2023-08-16T21:06:51,183           You can read more about "package discovery" on setuptools documentation page:

2023-08-16T21:06:51,184           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-16T21:06:51,185           If you don't want 'pyhmmer.tests.data.seqs' to be distributed and are
2023-08-16T21:06:51,185           already explicitly excluding 'pyhmmer.tests.data.seqs' via
2023-08-16T21:06:51,185           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-16T21:06:51,185           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-16T21:06:51,186           combination with a more fine grained `package-data` configuration.

2023-08-16T21:06:51,186           You can read more about "package data files" on setuptools documentation page:

2023-08-16T21:06:51,187           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-16T21:06:51,188           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-16T21:06:51,188                 even if it does not contain any `.py` files.
2023-08-16T21:06:51,189                 On the other hand, currently there is no concept of package data
2023-08-16T21:06:51,189                 directory, all directories are treated like packages.
2023-08-16T21:06:51,189           ********************************************************************************

2023-08-16T21:06:51,190   !!
2023-08-16T21:06:51,190     check.warn(importable)
2023-08-16T21:06:51,191   /tmp/pip-build-env-pxa_z6he/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyhmmer.tests.data.tables' is absent from the `packages` configuration.
2023-08-16T21:06:51,191   !!

2023-08-16T21:06:51,192           ********************************************************************************
2023-08-16T21:06:51,192           ############################
2023-08-16T21:06:51,192           # Package would be ignored #
2023-08-16T21:06:51,193           ############################
2023-08-16T21:06:51,193           Python recognizes 'pyhmmer.tests.data.tables' as an importable package[^1],
2023-08-16T21:06:51,193           but it is absent from setuptools' `packages` configuration.

2023-08-16T21:06:51,194           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-16T21:06:51,194           package, please make sure that 'pyhmmer.tests.data.tables' is explicitly added
2023-08-16T21:06:51,195           to the `packages` configuration field.

2023-08-16T21:06:51,195           Alternatively, you can also rely on setuptools' discovery methods
2023-08-16T21:06:51,196           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-16T21:06:51,196           instead of `find_packages(...)`/`find:`).

2023-08-16T21:06:51,197           You can read more about "package discovery" on setuptools documentation page:

2023-08-16T21:06:51,197           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-16T21:06:51,198           If you don't want 'pyhmmer.tests.data.tables' to be distributed and are
2023-08-16T21:06:51,198           already explicitly excluding 'pyhmmer.tests.data.tables' via
2023-08-16T21:06:51,198           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-16T21:06:51,199           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-16T21:06:51,199           combination with a more fine grained `package-data` configuration.

2023-08-16T21:06:51,200           You can read more about "package data files" on setuptools documentation page:

2023-08-16T21:06:51,201           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-16T21:06:51,202           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-16T21:06:51,202                 even if it does not contain any `.py` files.
2023-08-16T21:06:51,202                 On the other hand, currently there is no concept of package data
2023-08-16T21:06:51,203                 directory, all directories are treated like packages.
2023-08-16T21:06:51,203           ********************************************************************************

2023-08-16T21:06:51,204   !!
2023-08-16T21:06:51,204     check.warn(importable)
2023-08-16T21:06:51,204   copying pyhmmer/_getid.pxi -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-08-16T21:06:51,205   copying pyhmmer/daemon.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-08-16T21:06:51,205   copying pyhmmer/daemon.pyi -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-08-16T21:06:51,205   copying pyhmmer/daemon.pyx -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-08-16T21:06:51,205   copying pyhmmer/easel.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-08-16T21:06:51,206   copying pyhmmer/easel.pyi -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-08-16T21:06:51,206   copying pyhmmer/easel.pyx -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-08-16T21:06:51,207   copying pyhmmer/errors.pyi -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-08-16T21:06:51,207   copying pyhmmer/errors.pyx -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-08-16T21:06:51,207   copying pyhmmer/exceptions.pxi -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-08-16T21:06:51,208   copying pyhmmer/plan7.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-08-16T21:06:51,209   copying pyhmmer/plan7.pyi -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-08-16T21:06:51,216   copying pyhmmer/plan7.pyx -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-08-16T21:06:51,237   copying pyhmmer/py.typed -> build/lib.linux-armv7l-cpython-37/pyhmmer
2023-08-16T21:06:51,241   creating build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj
2023-08-16T21:06:51,243   copying pyhmmer/fileobj/__init__.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj
2023-08-16T21:06:51,251   copying pyhmmer/fileobj/bsd.h -> build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj
2023-08-16T21:06:51,255   copying pyhmmer/fileobj/bsd.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj
2023-08-16T21:06:51,260   copying pyhmmer/fileobj/linux.h -> build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj
2023-08-16T21:06:51,264   copying pyhmmer/fileobj/linux.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj
2023-08-16T21:06:51,268   copying pyhmmer/fileobj/util.h -> build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj
2023-08-16T21:06:51,273   creating build/lib.linux-armv7l-cpython-37/pyhmmer/reexports
2023-08-16T21:06:51,274   copying pyhmmer/reexports/__init__.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports
2023-08-16T21:06:51,278   copying pyhmmer/reexports/esl_sqio_ascii.h -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports
2023-08-16T21:06:51,282   copying pyhmmer/reexports/esl_sqio_ascii.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports
2023-08-16T21:06:51,286   copying pyhmmer/reexports/p7_hmmfile.h -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports
2023-08-16T21:06:51,290   copying pyhmmer/reexports/p7_hmmfile.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports
2023-08-16T21:06:51,294   copying pyhmmer/reexports/p7_tophits.h -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports
2023-08-16T21:06:51,298   copying pyhmmer/reexports/p7_tophits.pxd -> build/lib.linux-armv7l-cpython-37/pyhmmer/reexports
2023-08-16T21:06:51,303   copying pyhmmer/tests/requirements.txt -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests
2023-08-16T21:06:51,307   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data
2023-08-16T21:06:51,308   copying pyhmmer/tests/data/README.md -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data
2023-08-16T21:06:51,313   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms
2023-08-16T21:06:51,314   copying pyhmmer/tests/data/hmms/make.sh -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms
2023-08-16T21:06:51,319   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin
2023-08-16T21:06:51,320   copying pyhmmer/tests/data/hmms/bin/PF02826.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin
2023-08-16T21:06:51,328   copying pyhmmer/tests/data/hmms/bin/PKSI-AT.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin
2023-08-16T21:06:51,335   copying pyhmmer/tests/data/hmms/bin/Thioesterase.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin
2023-08-16T21:06:51,343   copying pyhmmer/tests/data/hmms/bin/t2pks.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin
2023-08-16T21:06:51,460   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:51,461   copying pyhmmer/tests/data/hmms/db/PF02826.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:51,470   copying pyhmmer/tests/data/hmms/db/PF02826.hmm.h3f -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:51,475   copying pyhmmer/tests/data/hmms/db/PF02826.hmm.h3i -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:51,480   copying pyhmmer/tests/data/hmms/db/PF02826.hmm.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:51,486   copying pyhmmer/tests/data/hmms/db/PF02826.hmm.h3p -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:51,493   copying pyhmmer/tests/data/hmms/db/PKSI-AT.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:51,505   copying pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3f -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:51,512   copying pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3i -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:51,516   copying pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:51,523   copying pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3p -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:51,532   copying pyhmmer/tests/data/hmms/db/Thioesterase.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:51,542   copying pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3f -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:51,547   copying pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3i -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:51,551   copying pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:51,558   copying pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3p -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:51,566   copying pyhmmer/tests/data/hmms/db/t2pks.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:51,861   copying pyhmmer/tests/data/hmms/db/t2pks.hmm.h3f -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:51,918   copying pyhmmer/tests/data/hmms/db/t2pks.hmm.h3i -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:51,922   copying pyhmmer/tests/data/hmms/db/t2pks.hmm.h3m -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:52,052   copying pyhmmer/tests/data/hmms/db/t2pks.hmm.h3p -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db
2023-08-16T21:06:52,205   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt
2023-08-16T21:06:52,206   copying pyhmmer/tests/data/hmms/txt/LuxC.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt
2023-08-16T21:06:52,221   copying pyhmmer/tests/data/hmms/txt/PF02826.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt
2023-08-16T21:06:52,230   copying pyhmmer/tests/data/hmms/txt/PKSI-AT.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt
2023-08-16T21:06:52,242   copying pyhmmer/tests/data/hmms/txt/Thioesterase.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt
2023-08-16T21:06:52,253   copying pyhmmer/tests/data/hmms/txt/bmyD.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt
2023-08-16T21:06:52,273   copying pyhmmer/tests/data/hmms/txt/laccase.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt
2023-08-16T21:06:52,303   copying pyhmmer/tests/data/hmms/txt/t2pks.hmm -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt
2023-08-16T21:06:52,519   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2
2023-08-16T21:06:52,522   copying pyhmmer/tests/data/hmms/txt2/PF02826.hmm2 -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2
2023-08-16T21:06:52,530   copying pyhmmer/tests/data/hmms/txt2/PKSI-AT.hmm2 -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2
2023-08-16T21:06:52,540   copying pyhmmer/tests/data/hmms/txt2/Thioesterase.hmm2 -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2
2023-08-16T21:06:52,550   copying pyhmmer/tests/data/hmms/txt2/t2pks.hmm2 -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2
2023-08-16T21:06:52,786   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-08-16T21:06:52,788   copying pyhmmer/tests/data/jackhmmer/KR-1.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-08-16T21:06:52,793   copying pyhmmer/tests/data/jackhmmer/KR-1_bkup.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-08-16T21:06:52,798   copying pyhmmer/tests/data/jackhmmer/KR-2.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-08-16T21:06:52,804   copying pyhmmer/tests/data/jackhmmer/KR-3.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-08-16T21:06:52,810   copying pyhmmer/tests/data/jackhmmer/KR-4.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-08-16T21:06:52,815   copying pyhmmer/tests/data/jackhmmer/KR-5.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-08-16T21:06:52,821   copying pyhmmer/tests/data/jackhmmer/KR-6.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-08-16T21:06:52,826   copying pyhmmer/tests/data/jackhmmer/p12748-1.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-08-16T21:06:52,830   copying pyhmmer/tests/data/jackhmmer/p12748-2.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-08-16T21:06:52,836   copying pyhmmer/tests/data/jackhmmer/p12748-3.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer
2023-08-16T21:06:52,840   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa
2023-08-16T21:06:52,842   copying pyhmmer/tests/data/msa/LuxC.faa -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa
2023-08-16T21:06:52,847   copying pyhmmer/tests/data/msa/LuxC.hmmalign.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa
2023-08-16T21:06:52,854   copying pyhmmer/tests/data/msa/LuxC.sto -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa
2023-08-16T21:06:52,858   copying pyhmmer/tests/data/msa/laccase.clw -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa
2023-08-16T21:06:52,864   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs
2023-08-16T21:06:52,865   copying pyhmmer/tests/data/seqs/938293.PRJEB85.HG003687.faa -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs
2023-08-16T21:06:52,917   copying pyhmmer/tests/data/seqs/BGC0001090.gbk -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs
2023-08-16T21:06:52,931   copying pyhmmer/tests/data/seqs/CP000560.2.fna -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs
2023-08-16T21:06:53,115   copying pyhmmer/tests/data/seqs/CP040672.1.genes_100.fna -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs
2023-08-16T21:06:53,125   copying pyhmmer/tests/data/seqs/LuxC.faa -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs
2023-08-16T21:06:53,130   copying pyhmmer/tests/data/seqs/PKSI.faa -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs
2023-08-16T21:06:53,137   copying pyhmmer/tests/data/seqs/bmyD.fna -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs
2023-08-16T21:06:53,141   creating build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-08-16T21:06:53,143   copying pyhmmer/tests/data/tables/A0A089QRB9.domtbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-08-16T21:06:53,148   copying pyhmmer/tests/data/tables/PF02826.domtbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-08-16T21:06:53,154   copying pyhmmer/tests/data/tables/PF02826.tbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-08-16T21:06:53,159   copying pyhmmer/tests/data/tables/bmyD1.tbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-08-16T21:06:53,163   copying pyhmmer/tests/data/tables/bmyD2.tbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-08-16T21:06:53,168   copying pyhmmer/tests/data/tables/bmyD3.tbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-08-16T21:06:53,172   copying pyhmmer/tests/data/tables/t2pks.domtbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-08-16T21:06:53,179   copying pyhmmer/tests/data/tables/t2pks.scan.tbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-08-16T21:06:53,184   copying pyhmmer/tests/data/tables/t2pks.tbl -> build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables
2023-08-16T21:06:53,198   running build_clib
2023-08-16T21:06:53,217   creating build/temp.linux-armv7l-cpython-37
2023-08-16T21:06:53,219   generating "divsufsort.h" for divsufsort library
2023-08-16T21:06:53,219   copying vendor/hmmer/libdivsufsort/divsufsort.h.in -> build/temp.linux-armv7l-cpython-37/divsufsort.h
2023-08-16T21:06:53,224   generating "esl_config.h" for easel library
2023-08-16T21:06:53,227   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_stdio_h.c -o build/temp.linux-armv7l-cpython-37/have_stdio_h.o
2023-08-16T21:06:53,446   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_stdlib_h.c -o build/temp.linux-armv7l-cpython-37/have_stdlib_h.o
2023-08-16T21:06:53,672   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_string_h.c -o build/temp.linux-armv7l-cpython-37/have_string_h.o
2023-08-16T21:06:53,853   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_inttypes_h.c -o build/temp.linux-armv7l-cpython-37/have_inttypes_h.o
2023-08-16T21:06:54,040   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_stdint_h.c -o build/temp.linux-armv7l-cpython-37/have_stdint_h.o
2023-08-16T21:06:54,218   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_strings_h.c -o build/temp.linux-armv7l-cpython-37/have_strings_h.o
2023-08-16T21:06:54,394   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sys_stat_h.c -o build/temp.linux-armv7l-cpython-37/have_sys_stat_h.o
2023-08-16T21:06:54,575   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sys_types_h.c -o build/temp.linux-armv7l-cpython-37/have_sys_types_h.o
2023-08-16T21:06:54,771   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_unistd_h.c -o build/temp.linux-armv7l-cpython-37/have_unistd_h.o
2023-08-16T21:06:54,969   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_endian_h.c -o build/temp.linux-armv7l-cpython-37/have_endian_h.o
2023-08-16T21:06:55,145   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_netinet_in_h.c -o build/temp.linux-armv7l-cpython-37/have_netinet_in_h.o
2023-08-16T21:06:55,386   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sys_param_h.c -o build/temp.linux-armv7l-cpython-37/have_sys_param_h.o
2023-08-16T21:06:55,642   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sys_sysctl_h.c -o build/temp.linux-armv7l-cpython-37/have_sys_sysctl_h.o
2023-08-16T21:06:55,839   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_aligned_alloc.c -o build/temp.linux-armv7l-cpython-37/have_aligned_alloc.o -Wno-all
2023-08-16T21:06:56,089   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_aligned_alloc.o -o build/temp.linux-armv7l-cpython-37/have_aligned_alloc.bin
2023-08-16T21:06:56,724   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_erfc.c -o build/temp.linux-armv7l-cpython-37/have_erfc.o -Wno-all
2023-08-16T21:06:56,985   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_erfc.o -o build/temp.linux-armv7l-cpython-37/have_erfc.bin
2023-08-16T21:06:57,613   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_getpid.c -o build/temp.linux-armv7l-cpython-37/have_getpid.o -Wno-all
2023-08-16T21:06:57,835   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_getpid.o -o build/temp.linux-armv7l-cpython-37/have_getpid.bin
2023-08-16T21:06:58,456   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have__mm_malloc.c -o build/temp.linux-armv7l-cpython-37/have__mm_malloc.o -Wno-all
2023-08-16T21:06:58,692   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have__mm_malloc.o -o build/temp.linux-armv7l-cpython-37/have__mm_malloc.bin
2023-08-16T21:06:59,308   /usr/bin/ld: /tmp/cc13Z0j9.ltrans0.ltrans.o: in function `main':
2023-08-16T21:06:59,309   <artificial>:(.text.startup+0xc): undefined reference to `_mm_malloc'
2023-08-16T21:06:59,309   collect2: error: ld returned 1 exit status
2023-08-16T21:06:59,319   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_popen.c -o build/temp.linux-armv7l-cpython-37/have_popen.o -Wno-all
2023-08-16T21:06:59,554   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_popen.o -o build/temp.linux-armv7l-cpython-37/have_popen.bin
2023-08-16T21:07:00,184   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_posix_memalign.c -o build/temp.linux-armv7l-cpython-37/have_posix_memalign.o -Wno-all
2023-08-16T21:07:00,444   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_posix_memalign.o -o build/temp.linux-armv7l-cpython-37/have_posix_memalign.bin
2023-08-16T21:07:01,077   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_strcasecmp.c -o build/temp.linux-armv7l-cpython-37/have_strcasecmp.o -Wno-all
2023-08-16T21:07:01,274   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_strcasecmp.o -o build/temp.linux-armv7l-cpython-37/have_strcasecmp.bin
2023-08-16T21:07:01,910   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_strsep.c -o build/temp.linux-armv7l-cpython-37/have_strsep.o -Wno-all
2023-08-16T21:07:02,118   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_strsep.o -o build/temp.linux-armv7l-cpython-37/have_strsep.bin
2023-08-16T21:07:02,743   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sysconf.c -o build/temp.linux-armv7l-cpython-37/have_sysconf.o -Wno-all
2023-08-16T21:07:02,976   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_sysconf.o -o build/temp.linux-armv7l-cpython-37/have_sysconf.bin
2023-08-16T21:07:03,602   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sysctl.c -o build/temp.linux-armv7l-cpython-37/have_sysctl.o -Wno-all
2023-08-16T21:07:03,850   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_sysctl.o -o build/temp.linux-armv7l-cpython-37/have_sysctl.bin
2023-08-16T21:07:04,477   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_times.c -o build/temp.linux-armv7l-cpython-37/have_times.o -Wno-all
2023-08-16T21:07:04,682   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_times.o -o build/temp.linux-armv7l-cpython-37/have_times.bin
2023-08-16T21:07:05,313   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_fseeko.c -o build/temp.linux-armv7l-cpython-37/have_fseeko.o -Wno-all
2023-08-16T21:07:05,551   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_fseeko.o -o build/temp.linux-armv7l-cpython-37/have_fseeko.bin
2023-08-16T21:07:06,189   generating "p7_config.h" for hmmer library
2023-08-16T21:07:06,192   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_endian_h.c -o build/temp.linux-armv7l-cpython-37/have_endian_h.o
2023-08-16T21:07:06,374   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_inttypes_h.c -o build/temp.linux-armv7l-cpython-37/have_inttypes_h.o
2023-08-16T21:07:06,558   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_stdint_h.c -o build/temp.linux-armv7l-cpython-37/have_stdint_h.o
2023-08-16T21:07:06,736   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_unistd_h.c -o build/temp.linux-armv7l-cpython-37/have_unistd_h.o
2023-08-16T21:07:06,928   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sys_types_h.c -o build/temp.linux-armv7l-cpython-37/have_sys_types_h.o
2023-08-16T21:07:07,125   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_netinet_in_h.c -o build/temp.linux-armv7l-cpython-37/have_netinet_in_h.o
2023-08-16T21:07:07,362   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sys_param_h.c -o build/temp.linux-armv7l-cpython-37/have_sys_param_h.o
2023-08-16T21:07:07,608   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sys_sysctl_h.c -o build/temp.linux-armv7l-cpython-37/have_sys_sysctl_h.o
2023-08-16T21:07:07,790   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_mkstemp.c -o build/temp.linux-armv7l-cpython-37/have_mkstemp.o -Wno-all
2023-08-16T21:07:08,037   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_mkstemp.o -o build/temp.linux-armv7l-cpython-37/have_mkstemp.bin
2023-08-16T21:07:08,661   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_popen.c -o build/temp.linux-armv7l-cpython-37/have_popen.o -Wno-all
2023-08-16T21:07:08,895   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_popen.o -o build/temp.linux-armv7l-cpython-37/have_popen.bin
2023-08-16T21:07:09,525   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_putenv.c -o build/temp.linux-armv7l-cpython-37/have_putenv.o -Wno-all
2023-08-16T21:07:09,779   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_putenv.o -o build/temp.linux-armv7l-cpython-37/have_putenv.bin
2023-08-16T21:07:10,406   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_strcasecmp.c -o build/temp.linux-armv7l-cpython-37/have_strcasecmp.o -Wno-all
2023-08-16T21:07:10,606   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_strcasecmp.o -o build/temp.linux-armv7l-cpython-37/have_strcasecmp.bin
2023-08-16T21:07:11,229   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_strsep.c -o build/temp.linux-armv7l-cpython-37/have_strsep.o -Wno-all
2023-08-16T21:07:11,440   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_strsep.o -o build/temp.linux-armv7l-cpython-37/have_strsep.bin
2023-08-16T21:07:12,074   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_times.c -o build/temp.linux-armv7l-cpython-37/have_times.o -Wno-all
2023-08-16T21:07:12,279   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_times.o -o build/temp.linux-armv7l-cpython-37/have_times.bin
2023-08-16T21:07:12,925   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_getpid.c -o build/temp.linux-armv7l-cpython-37/have_getpid.o -Wno-all
2023-08-16T21:07:13,151   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_getpid.o -o build/temp.linux-armv7l-cpython-37/have_getpid.bin
2023-08-16T21:07:13,789   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sysctl.c -o build/temp.linux-armv7l-cpython-37/have_sysctl.o -Wno-all
2023-08-16T21:07:14,040   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_sysctl.o -o build/temp.linux-armv7l-cpython-37/have_sysctl.bin
2023-08-16T21:07:14,674   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_sysconf.c -o build/temp.linux-armv7l-cpython-37/have_sysconf.o -Wno-all
2023-08-16T21:07:14,895   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_sysconf.o -o build/temp.linux-armv7l-cpython-37/have_sysconf.bin
2023-08-16T21:07:15,524   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_getcwd.c -o build/temp.linux-armv7l-cpython-37/have_getcwd.o -Wno-all
2023-08-16T21:07:15,746   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_getcwd.o -o build/temp.linux-armv7l-cpython-37/have_getcwd.bin
2023-08-16T21:07:16,374   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_chmod.c -o build/temp.linux-armv7l-cpython-37/have_chmod.o -Wno-all
2023-08-16T21:07:16,585   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_chmod.o -o build/temp.linux-armv7l-cpython-37/have_chmod.bin
2023-08-16T21:07:17,216   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_stat.c -o build/temp.linux-armv7l-cpython-37/have_stat.o -Wno-all
2023-08-16T21:07:17,440   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_stat.o -o build/temp.linux-armv7l-cpython-37/have_stat.bin
2023-08-16T21:07:18,071   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_fstat.c -o build/temp.linux-armv7l-cpython-37/have_fstat.o -Wno-all
2023-08-16T21:07:18,296   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_fstat.o -o build/temp.linux-armv7l-cpython-37/have_fstat.bin
2023-08-16T21:07:18,942   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -c build/temp.linux-armv7l-cpython-37/have_erfc.c -o build/temp.linux-armv7l-cpython-37/have_erfc.o -Wno-all
2023-08-16T21:07:19,202   arm-linux-gnueabihf-gcc -pthread build/temp.linux-armv7l-cpython-37/have_erfc.o -o build/temp.linux-armv7l-cpython-37/have_erfc.bin
2023-08-16T21:07:19,840   generating build/temp.linux-armv7l-cpython-37/libdivsufsort.a from vendor/hmmer/libdivsufsort/divsufsort.c
2023-08-16T21:07:19,863   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/libdivsufsort/divsufsort.o from vendor/hmmer/libdivsufsort/divsufsort.c
2023-08-16T21:07:19,864   creating build/temp.linux-armv7l-cpython-37/vendor
2023-08-16T21:07:19,865   creating build/temp.linux-armv7l-cpython-37/vendor/hmmer
2023-08-16T21:07:19,867   creating build/temp.linux-armv7l-cpython-37/vendor/hmmer/libdivsufsort
2023-08-16T21:07:19,871   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/libdivsufsort/divsufsort.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/libdivsufsort/divsufsort.o
2023-08-16T21:07:28,885   arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-37/libdivsufsort.a build/temp.linux-armv7l-cpython-37/vendor/hmmer/libdivsufsort/divsufsort.o
2023-08-16T21:07:28,949   generating build/temp.linux-armv7l-cpython-37/libeasel.a from vendor/easel/esl_threads.c, vendor/easel/esl_huffman.c, vendor/easel/esl_exponential.c, vendor/easel/esl_random.c, vendor/easel/esl_graph.c, vendor/easel/esl_iset.c, vendor/easel/esl_msafile2.c, vendor/easel/esl_gencode.c, vendor/easel/esl_msaweight.c, vendor/easel/esl_msafile.c, vendor/easel/esl_dsqdata.c, vendor/easel/esl_vectorops.c, vendor/easel/esl_gumbel.c, vendor/easel/interface_lapack.c, vendor/easel/esl_arr2.c, vendor/easel/esl_fileparser.c, vendor/easel/esl_msafile_selex.c, vendor/easel/esl_randomseq.c, vendor/easel/esl_tree.c, vendor/easel/esl_stats.c, vendor/easel/esl_wuss.c, vendor/easel/esl_ratematrix.c, vendor/easel/esl_subcmd.c, vendor/easel/esl_workqueue.c, vendor/easel/esl_quicksort.c, vendor/easel/interface_gsl.c, vendor/easel/esl_cpu.c, vendor/easel/esl_msafile_afa.c, vendor/easel/esl_rand64.c, vendor/easel/esl_dirichlet.c, vendor/easel/esl_normal.c, vendor/easel/esl_sse.c, vendor/easel/esl_msashuffle.c, vendor/easel/esl_gev.c, vendor/easel/esl_distance.c, vendor/easel/esl_minimizer.c, vendor/easel/esl_msafile_stockholm.c, vendor/easel/esl_alloc.c, vendor/easel/esl_sq.c, vendor/easel/easel.c, vendor/easel/esl_rootfinder.c, vendor/easel/esl_msafile_phylip.c, vendor/easel/esl_matrixops.c, vendor/easel/esl_sqio_ncbi.c, vendor/easel/esl_alphabet.c, vendor/easel/esl_regexp.c, vendor/easel/esl_gamma.c, vendor/easel/esl_stopwatch.c, vendor/easel/esl_heap.c, vendor/easel/esl_msafile_psiblast.c, vendor/easel/esl_neon.c, vendor/easel/esl_avx.c, vendor/easel/esl_hyperexp.c, vendor/easel/esl_weibull.c, vendor/easel/esl_buffer.c, vendor/easel/esl_dmatrix.c, vendor/easel/esl_scorematrix.c, vendor/easel/esl_composition.c, vendor/easel/esl_msafile_a2m.c, vendor/easel/esl_msacluster.c, vendor/easel/esl_cluster.c, vendor/easel/esl_mixdchlet.c, vendor/easel/esl_red_black.c, vendor/easel/esl_msafile_clustal.c, vendor/easel/esl_mem.c, vendor/easel/esl_stack.c, vendor/easel/esl_varint.c, vendor/easel/esl_getopts.c, vendor/easel/esl_recorder.c, vendor/easel/esl_sqio_ascii.c, vendor/easel/esl_arr3.c, vendor/easel/esl_mpi.c, vendor/easel/esl_bitfield.c, vendor/easel/esl_sqio.c, vendor/easel/esl_avx512.c, vendor/easel/esl_lognormal.c, vendor/easel/esl_ssi.c, vendor/easel/esl_paml.c, vendor/easel/esl_json.c, vendor/easel/esl_swat.c, vendor/easel/esl_stretchexp.c, vendor/easel/esl_msa.c, vendor/easel/esl_hmm.c, vendor/easel/esl_histogram.c, vendor/easel/esl_mixgev.c, vendor/easel/esl_vmx.c, vendor/easel/esl_keyhash.c
2023-08-16T21:07:28,951   generating build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c from vendor/easel/esl_sqio_ascii.c
2023-08-16T21:07:28,984   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_threads.o from vendor/easel/esl_threads.c
2023-08-16T21:07:28,985   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gumbel.o from vendor/easel/esl_gumbel.c
2023-08-16T21:07:28,987   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile2.o from vendor/easel/esl_msafile2.c
2023-08-16T21:07:28,988   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_tree.o from vendor/easel/esl_tree.c
2023-08-16T21:07:28,990   creating build/temp.linux-armv7l-cpython-37/vendor/easel
2023-08-16T21:07:28,990   creating build/temp.linux-armv7l-cpython-37/vendor/easel
2023-08-16T21:07:28,991   creating build/temp.linux-armv7l-cpython-37/vendor/easel
2023-08-16T21:07:28,992   creating build/temp.linux-armv7l-cpython-37/vendor/easel
2023-08-16T21:07:28,993   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_tree.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_tree.o
2023-08-16T21:07:28,993   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_gumbel.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gumbel.o
2023-08-16T21:07:29,018   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msafile2.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile2.o
2023-08-16T21:07:29,032   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_threads.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_threads.o
2023-08-16T21:07:29,230   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_huffman.o from vendor/easel/esl_huffman.c
2023-08-16T21:07:29,230   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_huffman.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_huffman.o
2023-08-16T21:07:29,446   In file included from vendor/easel/esl_msafile2.c:26:
2023-08-16T21:07:29,446   vendor/easel/esl_msafile2.c: In function ‘esl_msafile2_ReadInfoPfam’:
2023-08-16T21:07:29,448   vendor/easel/easel.h:432:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:29,449    #define ESL_MAX(a,b)          (((a)>(b))?(a):(b))
2023-08-16T21:07:29,450                                       ^
2023-08-16T21:07:29,450   vendor/easel/esl_msafile2.c:632:43: note: in expansion of macro ‘ESL_MAX’
2023-08-16T21:07:29,451        for(i = 0; i < msa->ngc; i++) maxgc = ESL_MAX(maxgc, strlen(msa->gc_tag[i]));
2023-08-16T21:07:29,452                                              ^~~~~~~
2023-08-16T21:07:29,453   vendor/easel/easel.h:432:42: warning: operand of ?: changes signedness from ‘int’ to ‘size_t’ {aka ‘unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-08-16T21:07:29,454    #define ESL_MAX(a,b)          (((a)>(b))?(a):(b))
2023-08-16T21:07:29,455                                             ^~~
2023-08-16T21:07:29,455   vendor/easel/esl_msafile2.c:632:43: note: in expansion of macro ‘ESL_MAX’
2023-08-16T21:07:29,456        for(i = 0; i < msa->ngc; i++) maxgc = ESL_MAX(maxgc, strlen(msa->gc_tag[i]));
2023-08-16T21:07:29,456                                              ^~~~~~~
2023-08-16T21:07:29,460   vendor/easel/easel.h:432:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:29,461    #define ESL_MAX(a,b)          (((a)>(b))?(a):(b))
2023-08-16T21:07:29,462                                       ^
2023-08-16T21:07:29,462   vendor/easel/esl_msafile2.c:641:43: note: in expansion of macro ‘ESL_MAX’
2023-08-16T21:07:29,463        for(i = 0; i < msa->ngf; i++) maxgf = ESL_MAX(maxgf, strlen(msa->gf_tag[i]));
2023-08-16T21:07:29,463                                              ^~~~~~~
2023-08-16T21:07:29,467   vendor/easel/easel.h:432:42: warning: operand of ?: changes signedness from ‘int’ to ‘size_t’ {aka ‘unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-08-16T21:07:29,468    #define ESL_MAX(a,b)          (((a)>(b))?(a):(b))
2023-08-16T21:07:29,469                                             ^~~
2023-08-16T21:07:29,469   vendor/easel/esl_msafile2.c:641:43: note: in expansion of macro ‘ESL_MAX’
2023-08-16T21:07:29,470        for(i = 0; i < msa->ngf; i++) maxgf = ESL_MAX(maxgf, strlen(msa->gf_tag[i]));
2023-08-16T21:07:29,470                                              ^~~~~~~
2023-08-16T21:07:30,734   generating build/temp.linux-armv7l-cpython-37/vendor/easel/interface_lapack.o from vendor/easel/interface_lapack.c
2023-08-16T21:07:30,736   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/interface_lapack.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/interface_lapack.o
2023-08-16T21:07:30,934   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_arr2.o from vendor/easel/esl_arr2.c
2023-08-16T21:07:30,936   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_arr2.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_arr2.o
2023-08-16T21:07:30,963   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_exponential.o from vendor/easel/esl_exponential.c
2023-08-16T21:07:30,964   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_exponential.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_exponential.o
2023-08-16T21:07:31,520   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_fileparser.o from vendor/easel/esl_fileparser.c
2023-08-16T21:07:31,522   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_fileparser.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_fileparser.o
2023-08-16T21:07:32,083   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_random.o from vendor/easel/esl_random.c
2023-08-16T21:07:32,084   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_random.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_random.o
2023-08-16T21:07:32,490   vendor/easel/esl_random.c: In function ‘esl_rnd_Roll’:
2023-08-16T21:07:32,491   vendor/easel/esl_random.c:319:54: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:32,491      do { u = esl_random_uint32(r) / factor; } while (u >= n);
2023-08-16T21:07:32,492                                                         ^~
2023-08-16T21:07:32,509   vendor/easel/esl_random.c: In function ‘gamma_integer’:
2023-08-16T21:07:32,510   vendor/easel/esl_random.c:655:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-08-16T21:07:32,511      for (i = 0; i < a; i++)
2023-08-16T21:07:32,511                    ^
2023-08-16T21:07:32,771   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_selex.o from vendor/easel/esl_msafile_selex.c
2023-08-16T21:07:32,773   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msafile_selex.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_selex.o
2023-08-16T21:07:33,990   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_graph.o from vendor/easel/esl_graph.c
2023-08-16T21:07:33,992   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_graph.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_graph.o
2023-08-16T21:07:34,585   vendor/easel/esl_msafile_selex.c: In function ‘esl_msafile_selex_Read’:
2023-08-16T21:07:34,586   vendor/easel/esl_msafile_selex.c:722:71: warning: ‘p’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:07:34,586       for (alen = msa->alen+nleft+ntext; alen < msa->alen+nadd; alen++) p[alen] = '.';
2023-08-16T21:07:34,587                                                                          ^
2023-08-16T21:07:34,587   vendor/easel/esl_msafile_selex.c:645:13: note: ‘p’ was declared here
2023-08-16T21:07:34,588      char     *p;
2023-08-16T21:07:34,589                ^
2023-08-16T21:07:34,897   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_iset.o from vendor/easel/esl_iset.c
2023-08-16T21:07:34,899   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_iset.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_iset.o
2023-08-16T21:07:35,182   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gencode.o from vendor/easel/esl_gencode.c
2023-08-16T21:07:35,184   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_gencode.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gencode.o
2023-08-16T21:07:35,253   vendor/easel/esl_iset.c: In function ‘esl_iset_monoCobalt’:
2023-08-16T21:07:35,255   vendor/easel/esl_iset.c:127:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,255      for (v = 0; v < n; v++) a[v] = n-v-1; // initialize by putting all vertices into array a
2023-08-16T21:07:35,256                    ^
2023-08-16T21:07:35,256   vendor/easel/esl_iset.c:131:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,257      for (j = 0; j < n; j++)
2023-08-16T21:07:35,257                    ^
2023-08-16T21:07:35,258   vendor/easel/esl_iset.c:135:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,259          for (i = n; i < n+nb; i++)
2023-08-16T21:07:35,259                        ^
2023-08-16T21:07:35,260   vendor/easel/esl_iset.c: In function ‘esl_iset_biCobalt’:
2023-08-16T21:07:35,260   vendor/easel/esl_iset.c:209:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,261      for (v = 0; v < n; v++) a[v] = n-v-1;   // initialize by putting all vertices into an array
2023-08-16T21:07:35,262                    ^
2023-08-16T21:07:35,262   vendor/easel/esl_iset.c:213:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,263      for (j = 0; j <n; j++)
2023-08-16T21:07:35,263                    ^
2023-08-16T21:07:35,264   vendor/easel/esl_iset.c:220:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,264              for (i = n; i < n+nb1; i++)
2023-08-16T21:07:35,265                            ^
2023-08-16T21:07:35,265   vendor/easel/esl_iset.c:229:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,281                  for (i = 2*n; i < 2*n+nb2; i++)
2023-08-16T21:07:35,281                                  ^
2023-08-16T21:07:35,282   vendor/easel/esl_iset.c:253:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,283              for (i = 2*n; i < 2*n+nb2; i++)
2023-08-16T21:07:35,283                              ^
2023-08-16T21:07:35,283   vendor/easel/esl_iset.c:262:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,284                  for (i = n; i < n+nb1; i++)
2023-08-16T21:07:35,284                                ^
2023-08-16T21:07:35,285   vendor/easel/esl_iset.c:287:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,285          for (i = 0; i < n; i++)
2023-08-16T21:07:35,286                        ^
2023-08-16T21:07:35,286   vendor/easel/esl_iset.c: In function ‘esl_iset_monoBlue’:
2023-08-16T21:07:35,287   vendor/easel/esl_iset.c:809:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,287      for (i = 0; i < n; i++)
2023-08-16T21:07:35,288                    ^
2023-08-16T21:07:35,289   vendor/easel/esl_iset.c: In function ‘esl_iset_biBlue’:
2023-08-16T21:07:35,289   vendor/easel/esl_iset.c:1011:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,290      for (i = 0; i < n; i++)
2023-08-16T21:07:35,290                    ^
2023-08-16T21:07:35,291   vendor/easel/esl_iset.c:1018:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,292      for (i = 0; i < n; i++)  elig[i]=3;
2023-08-16T21:07:35,292                    ^
2023-08-16T21:07:35,292   vendor/easel/esl_iset.c:1033:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,293          for (i = 0; i < n; i++)
2023-08-16T21:07:35,293                        ^
2023-08-16T21:07:35,294   vendor/easel/esl_iset.c: In function ‘esl_iset_biRandom’:
2023-08-16T21:07:35,295   vendor/easel/esl_iset.c:1089:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,295      for (i = 0; i < n; i++)
2023-08-16T21:07:35,296                    ^
2023-08-16T21:07:35,296   vendor/easel/esl_iset.c:1095:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,297      for (i = 0; i < n; i++)
2023-08-16T21:07:35,297                    ^
2023-08-16T21:07:35,298   vendor/easel/esl_iset.c:1100:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,298              for (j = 0; j < n; j++)
2023-08-16T21:07:35,299                            ^
2023-08-16T21:07:35,299   vendor/easel/esl_iset.c: In function ‘esl_iset_monoValidate’:
2023-08-16T21:07:35,301   vendor/easel/esl_iset.c:1173:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,301       for (i = 0; i < n; i++)
2023-08-16T21:07:35,302                     ^
2023-08-16T21:07:35,302   vendor/easel/esl_iset.c:1175:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,302           for (j = i+1; j < n; j++)
2023-08-16T21:07:35,303                           ^
2023-08-16T21:07:35,303   vendor/easel/esl_iset.c: In function ‘esl_iset_biValidate’:
2023-08-16T21:07:35,304   vendor/easel/esl_iset.c:1218:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,304       for (i = 0; i < n; i++)
2023-08-16T21:07:35,305                     ^
2023-08-16T21:07:35,305   vendor/easel/esl_iset.c:1220:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,306           for (j = i+1; j < n; j++)
2023-08-16T21:07:35,306                           ^
2023-08-16T21:07:35,307   vendor/easel/esl_iset.c:1230:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:35,308       for (i = 0; i < n; i++)
2023-08-16T21:07:35,308                     ^
2023-08-16T21:07:35,445   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stats.o from vendor/easel/esl_stats.c
2023-08-16T21:07:35,447   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_stats.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stats.o
2023-08-16T21:07:37,110   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_randomseq.o from vendor/easel/esl_randomseq.c
2023-08-16T21:07:37,112   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_randomseq.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_randomseq.o
2023-08-16T21:07:37,312   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_wuss.o from vendor/easel/esl_wuss.c
2023-08-16T21:07:37,314   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_wuss.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_wuss.o
2023-08-16T21:07:37,678   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_quicksort.o from vendor/easel/esl_quicksort.c
2023-08-16T21:07:37,680   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_quicksort.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_quicksort.o
2023-08-16T21:07:37,988   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msaweight.o from vendor/easel/esl_msaweight.c
2023-08-16T21:07:37,990   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msaweight.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msaweight.o
2023-08-16T21:07:38,021   vendor/easel/esl_wuss.c: In function ‘esl_wuss2ct’:
2023-08-16T21:07:38,022   vendor/easel/esl_wuss.c:136:10: warning: ‘status’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:07:38,022      return status;
2023-08-16T21:07:38,023             ^~~~~~
2023-08-16T21:07:38,311   generating build/temp.linux-armv7l-cpython-37/vendor/easel/interface_gsl.o from vendor/easel/interface_gsl.c
2023-08-16T21:07:38,312   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/interface_gsl.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/interface_gsl.o
2023-08-16T21:07:38,511   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_cpu.o from vendor/easel/esl_cpu.c
2023-08-16T21:07:38,512   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_cpu.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_cpu.o
2023-08-16T21:07:38,965   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_afa.o from vendor/easel/esl_msafile_afa.c
2023-08-16T21:07:38,968   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msafile_afa.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_afa.o
2023-08-16T21:07:39,613   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_ratematrix.o from vendor/easel/esl_ratematrix.c
2023-08-16T21:07:39,616   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_ratematrix.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_ratematrix.o
2023-08-16T21:07:40,329   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_rand64.o from vendor/easel/esl_rand64.c
2023-08-16T21:07:40,332   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_rand64.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_rand64.o
2023-08-16T21:07:41,245   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_subcmd.o from vendor/easel/esl_subcmd.c
2023-08-16T21:07:41,246   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_subcmd.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_subcmd.o
2023-08-16T21:07:41,573   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_normal.o from vendor/easel/esl_normal.c
2023-08-16T21:07:41,577   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_normal.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_normal.o
2023-08-16T21:07:41,599   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile.o from vendor/easel/esl_msafile.c
2023-08-16T21:07:41,600   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msafile.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile.o
2023-08-16T21:07:41,666   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dirichlet.o from vendor/easel/esl_dirichlet.c
2023-08-16T21:07:41,668   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_dirichlet.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dirichlet.o
2023-08-16T21:07:41,894   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_workqueue.o from vendor/easel/esl_workqueue.c
2023-08-16T21:07:41,896   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_workqueue.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_workqueue.o
2023-08-16T21:07:42,085   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_stockholm.o from vendor/easel/esl_msafile_stockholm.c
2023-08-16T21:07:42,087   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msafile_stockholm.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_stockholm.o
2023-08-16T21:07:42,205   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sse.o from vendor/easel/esl_sse.c
2023-08-16T21:07:42,208   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_sse.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sse.o
2023-08-16T21:07:42,448   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msashuffle.o from vendor/easel/esl_msashuffle.c
2023-08-16T21:07:42,451   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msashuffle.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msashuffle.o
2023-08-16T21:07:42,498   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_matrixops.o from vendor/easel/esl_matrixops.c
2023-08-16T21:07:42,500   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_matrixops.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_matrixops.o
2023-08-16T21:07:42,862   vendor/easel/esl_msashuffle.c: In function ‘esl_msashuffle_CQRNA’:
2023-08-16T21:07:42,863   vendor/easel/esl_msashuffle.c:449:17: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:42,863      if (strlen(y) != L) ESL_XEXCEPTION(eslEINVAL, "sequences of different lengths in qrna shuffle");
2023-08-16T21:07:42,864                    ^~
2023-08-16T21:07:44,063   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dsqdata.o from vendor/easel/esl_dsqdata.c
2023-08-16T21:07:44,065   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_dsqdata.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dsqdata.o
2023-08-16T21:07:44,256   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sqio_ncbi.o from vendor/easel/esl_sqio_ncbi.c
2023-08-16T21:07:44,258   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_sqio_ncbi.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sqio_ncbi.o
2023-08-16T21:07:44,524   vendor/easel/esl_dsqdata.c: In function ‘esl_dsqdata_Open’:
2023-08-16T21:07:44,525   vendor/easel/esl_dsqdata.c:255:21: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,525          if (alphatype != dd->abc_r->type)
2023-08-16T21:07:44,526                        ^~
2023-08-16T21:07:44,548   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gev.o from vendor/easel/esl_gev.c
2023-08-16T21:07:44,558   vendor/easel/esl_dsqdata.c: In function ‘esl_dsqdata_Write’:
2023-08-16T21:07:44,559   vendor/easel/esl_dsqdata.c:617:17: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,560          if (sq->n > max_seqlen) max_seqlen = sq->n;
2023-08-16T21:07:44,560                    ^
2023-08-16T21:07:44,561   vendor/easel/esl_dsqdata.c:618:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,562          n = strlen(sq->name); if (n > max_namelen) max_namelen = n;
2023-08-16T21:07:44,563                                      ^
2023-08-16T21:07:44,564   vendor/easel/esl_dsqdata.c:619:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,564          n = strlen(sq->acc);  if (n > max_acclen)  max_acclen  = n;
2023-08-16T21:07:44,565                                      ^
2023-08-16T21:07:44,565   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_gev.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gev.o
2023-08-16T21:07:44,566   vendor/easel/esl_dsqdata.c:620:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,566          n = strlen(sq->desc); if (n > max_desclen) max_desclen = n;
2023-08-16T21:07:44,566                                      ^
2023-08-16T21:07:44,567   vendor/easel/esl_dsqdata.c:677:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,568          if ( fwrite(psq, sizeof(uint32_t), plen, sfp) != plen)
2023-08-16T21:07:44,568                                                        ^~
2023-08-16T21:07:44,569   vendor/easel/esl_dsqdata.c:683:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,569          if ( fwrite(sq->name, sizeof(char), n+1, mfp) != n+1)
2023-08-16T21:07:44,570                                                        ^~
2023-08-16T21:07:44,570   vendor/easel/esl_dsqdata.c:688:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,571          if ( fwrite(sq->acc,  sizeof(char), n+1, mfp) != n+1)
2023-08-16T21:07:44,571                                                        ^~
2023-08-16T21:07:44,572   vendor/easel/esl_dsqdata.c:693:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,572          if ( fwrite(sq->desc, sizeof(char), n+1, mfp) != n+1)
2023-08-16T21:07:44,573                                                        ^~
2023-08-16T21:07:44,642   vendor/easel/esl_dsqdata.c: In function ‘dsqdata_unpacker_thread’:
2023-08-16T21:07:44,643   vendor/easel/esl_dsqdata.c:1130:1: warning: control reaches end of non-void function [-Wreturn-type]
2023-08-16T21:07:44,643    }
2023-08-16T21:07:44,644    ^
2023-08-16T21:07:44,657   vendor/easel/esl_dsqdata.c: In function ‘dsqdata_loader_thread’:
2023-08-16T21:07:44,658   vendor/easel/esl_dsqdata.c:1053:1: warning: control reaches end of non-void function [-Wreturn-type]
2023-08-16T21:07:44,658    }
2023-08-16T21:07:44,659    ^
2023-08-16T21:07:44,659   vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_ParseIndexFile’:
2023-08-16T21:07:44,660   vendor/easel/esl_sqio_ncbi.c:216:24: warning: comparison of integer expressions of different signedness: ‘__uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,660      if (htobe32(info[1]) != dbtype)                             status = eslEUNIMPLEMENTED;
2023-08-16T21:07:44,661                           ^~
2023-08-16T21:07:44,662   vendor/easel/esl_sqio_ncbi.c:226:58: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,662      if (fread(ncbi->title, sizeof(char), len, ncbi->fppin) != len) { status = eslFAIL; goto ERROR; }
2023-08-16T21:07:44,663                                                             ^~
2023-08-16T21:07:44,663   vendor/easel/esl_sqio_ncbi.c:233:62: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,664      if (fread(ncbi->timestamp, sizeof(char), len, ncbi->fppin) != len) { status = eslFAIL; goto ERROR; }
2023-08-16T21:07:44,664                                                                 ^~
2023-08-16T21:07:44,685   vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_Read’:
2023-08-16T21:07:44,686   vendor/easel/esl_sqio_ncbi.c:758:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,686      if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-08-16T21:07:44,687                      ^~
2023-08-16T21:07:44,688   vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_ReadInfo’:
2023-08-16T21:07:44,688   vendor/easel/esl_sqio_ncbi.c:809:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,689      if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-08-16T21:07:44,689                      ^~
2023-08-16T21:07:44,690   vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_ReadSequence’:
2023-08-16T21:07:44,690   vendor/easel/esl_sqio_ncbi.c:860:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,691      if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-08-16T21:07:44,691                      ^~
2023-08-16T21:07:44,696   vendor/easel/esl_sqio_ncbi.c: In function ‘sqncbi_ReadWindow’:
2023-08-16T21:07:44,697   vendor/easel/esl_sqio_ncbi.c:1036:33: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,697        if (status != eslOK || nres != W) {
2023-08-16T21:07:44,697                                    ^~
2023-08-16T21:07:44,698   vendor/easel/esl_sqio_ncbi.c:1059:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,699          if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-08-16T21:07:44,699                          ^~
2023-08-16T21:07:44,720   vendor/easel/esl_sqio_ncbi.c: In function ‘volume_open’:
2023-08-16T21:07:44,721   vendor/easel/esl_sqio_ncbi.c:1421:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,722      if (volume < 0 || volume > ncbi->volumes) return eslEINVAL;
2023-08-16T21:07:44,722                               ^
2023-08-16T21:07:44,727   vendor/easel/esl_sqio_ncbi.c:1458:24: warning: comparison of integer expressions of different signedness: ‘__uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,728      if (htobe32(info[1]) != dbtype)                             status = eslEFORMAT;
2023-08-16T21:07:44,729                           ^~
2023-08-16T21:07:44,731   vendor/easel/esl_sqio_ncbi.c: In function ‘pos_sequence’:
2023-08-16T21:07:44,731   vendor/easel/esl_sqio_ncbi.c:1513:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,732      if (inx < 0 || inx > ncbi->num_seq) return eslEINVAL;
2023-08-16T21:07:44,732                         ^
2023-08-16T21:07:44,736   vendor/easel/esl_sqio_ncbi.c:1519:25: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,736      if (ncbi->index_start == -1 || inx < start || inx > end) {
2023-08-16T21:07:44,737                            ^~
2023-08-16T21:07:44,737   vendor/easel/esl_sqio_ncbi.c:1519:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,738      if (ncbi->index_start == -1 || inx < start || inx > end) {
2023-08-16T21:07:44,738                                         ^
2023-08-16T21:07:44,738   vendor/easel/esl_sqio_ncbi.c:1519:53: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,739      if (ncbi->index_start == -1 || inx < start || inx > end) {
2023-08-16T21:07:44,739                                                        ^
2023-08-16T21:07:44,740   vendor/easel/esl_sqio_ncbi.c:1524:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,740          if (inx < volume->start_seq || inx > volume->end_seq) {
2023-08-16T21:07:44,740                  ^
2023-08-16T21:07:44,745   vendor/easel/esl_sqio_ncbi.c:1524:42: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,746          if (inx < volume->start_seq || inx > volume->end_seq) {
2023-08-16T21:07:44,746                                             ^
2023-08-16T21:07:44,747   vendor/easel/esl_sqio_ncbi.c:1526:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,747     for (cnt = 0; cnt < ncbi->volumes; ++cnt) {
2023-08-16T21:07:44,748                       ^
2023-08-16T21:07:44,748   vendor/easel/esl_sqio_ncbi.c:1527:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,748       if (inx < volume->end_seq) break;
2023-08-16T21:07:44,749               ^
2023-08-16T21:07:44,749   vendor/easel/esl_sqio_ncbi.c:1532:10: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,750     if (cnt >= ncbi->volumes) return eslFAIL;
2023-08-16T21:07:44,750             ^~
2023-08-16T21:07:44,751   vendor/easel/esl_sqio_ncbi.c:1539:27: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,751        if (ncbi->index_start == -1 || inx > end) {
2023-08-16T21:07:44,752                              ^~
2023-08-16T21:07:44,752   vendor/easel/esl_sqio_ncbi.c:1539:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,752        if (ncbi->index_start == -1 || inx > end) {
2023-08-16T21:07:44,753                                           ^
2023-08-16T21:07:44,753   vendor/easel/esl_sqio_ncbi.c:1564:70: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,754        if (fread(ncbi->hdr_indexes, sizeof(uint32_t), cnt, ncbi->fppin) != cnt) {
2023-08-16T21:07:44,754                                                                         ^~
2023-08-16T21:07:44,754   vendor/easel/esl_sqio_ncbi.c:1572:70: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,755        if (fread(ncbi->seq_indexes, sizeof(uint32_t), cnt, ncbi->fppin) != cnt) {
2023-08-16T21:07:44,755                                                                         ^~
2023-08-16T21:07:44,756   vendor/easel/esl_sqio_ncbi.c:1581:72: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,756          if (fread(ncbi->amb_indexes, sizeof(uint32_t), cnt, ncbi->fppin) != cnt) {
2023-08-16T21:07:44,757                                                                           ^~
2023-08-16T21:07:44,757   vendor/easel/esl_sqio_ncbi.c: In function ‘read_amino’:
2023-08-16T21:07:44,758   vendor/easel/esl_sqio_ncbi.c:1623:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,758      if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-08-16T21:07:44,759                      ^~
2023-08-16T21:07:44,759   vendor/easel/esl_sqio_ncbi.c:1633:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,759        if (fread(ptr, sizeof(char), size, ncbi->fppsq) != size) return eslEFORMAT;
2023-08-16T21:07:44,760                                                        ^~
2023-08-16T21:07:44,760   vendor/easel/esl_sqio_ncbi.c:1641:53: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,774        if (fread(ptr, sizeof(char), size, ncbi->fppsq) != size) return eslEFORMAT;
2023-08-16T21:07:44,775                                                        ^~
2023-08-16T21:07:44,775   vendor/easel/esl_sqio_ncbi.c: In function ‘read_dna’:
2023-08-16T21:07:44,776   vendor/easel/esl_sqio_ncbi.c:1690:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,776      if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-08-16T21:07:44,776                      ^~
2023-08-16T21:07:44,777   vendor/easel/esl_sqio_ncbi.c:1701:61: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,777      if (fread(ncbi->hdr_buf, sizeof(char), size, ncbi->fppsq) != size) return eslEFORMAT;
2023-08-16T21:07:44,778                                                                ^~
2023-08-16T21:07:44,778   vendor/easel/esl_sqio_ncbi.c:1754:33: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,779      if (ncbi->seq_apos - sq->doff < size) {
2023-08-16T21:07:44,779                                    ^
2023-08-16T21:07:44,780   vendor/easel/esl_sqio_ncbi.c: In function ‘read_nres_amino’:
2023-08-16T21:07:44,780   vendor/easel/esl_sqio_ncbi.c:1831:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,781      if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-08-16T21:07:44,781                      ^~
2023-08-16T21:07:44,782   vendor/easel/esl_sqio_ncbi.c:1856:51: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,782      if (fread(ptr, sizeof(char), size, ncbi->fppsq) != size) return eslEFORMAT;
2023-08-16T21:07:44,783                                                      ^~
2023-08-16T21:07:44,789   vendor/easel/esl_sqio_ncbi.c: In function ‘read_nres_dna’:
2023-08-16T21:07:44,790   vendor/easel/esl_sqio_ncbi.c:2005:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,790      if (ncbi->index >= ncbi->num_seq) return eslEOF;
2023-08-16T21:07:44,791                      ^~
2023-08-16T21:07:44,797   vendor/easel/esl_sqio_ncbi.c:2047:62: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,797      if (fread(ncbi->hdr_buf, sizeof(char), ssize, ncbi->fppsq) != ssize) return eslEFORMAT;
2023-08-16T21:07:44,798                                                                 ^~
2023-08-16T21:07:44,821   vendor/easel/esl_sqio_ncbi.c: In function ‘inmap_ncbi_dna’:
2023-08-16T21:07:44,822   vendor/easel/esl_sqio_ncbi.c:2178:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,823      for (x = 0; x < strlen(ncbisym); ++x) {
2023-08-16T21:07:44,823                    ^
2023-08-16T21:07:44,824   vendor/easel/esl_sqio_ncbi.c:2179:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,825        for (y = 0; y < strlen(abc->sym); ++y) {
2023-08-16T21:07:44,825                      ^
2023-08-16T21:07:44,826   vendor/easel/esl_sqio_ncbi.c:2187:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,826        if (y >= strlen(abc->sym)) return eslEFORMAT;
2023-08-16T21:07:44,826              ^~
2023-08-16T21:07:44,828   vendor/easel/esl_sqio_ncbi.c: In function ‘inmap_ncbi_amino’:
2023-08-16T21:07:44,829   vendor/easel/esl_sqio_ncbi.c:2226:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,829      for (x = 0; x < strlen(ncbisym); ++x) {
2023-08-16T21:07:44,830                    ^
2023-08-16T21:07:44,831   vendor/easel/esl_sqio_ncbi.c:2227:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,831        for (y = 0; y < strlen(abc->sym); ++y) {
2023-08-16T21:07:44,832                      ^
2023-08-16T21:07:44,832   vendor/easel/esl_sqio_ncbi.c:2235:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:07:44,833        if (y >= strlen(abc->sym)) return eslEFORMAT;
2023-08-16T21:07:44,833              ^~
2023-08-16T21:07:44,839   vendor/easel/esl_sqio_ncbi.c: In function ‘parse_header’:
2023-08-16T21:07:44,840   vendor/easel/esl_sqio_ncbi.c:2463:61: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:44,841      if (fread(ncbi->hdr_buf, sizeof(char), size, ncbi->fpphr) != size) return eslEFORMAT;
2023-08-16T21:07:44,842                                                                ^~
2023-08-16T21:07:46,064   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_distance.o from vendor/easel/esl_distance.c
2023-08-16T21:07:46,064   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_distance.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_distance.o
2023-08-16T21:07:48,826   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_vectorops.o from vendor/easel/esl_vectorops.c
2023-08-16T21:07:48,829   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_vectorops.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_vectorops.o
2023-08-16T21:07:48,883   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_alloc.o from vendor/easel/esl_alloc.c
2023-08-16T21:07:48,885   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_alloc.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_alloc.o
2023-08-16T21:07:49,347   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_minimizer.o from vendor/easel/esl_minimizer.c
2023-08-16T21:07:49,350   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_minimizer.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_minimizer.o
2023-08-16T21:07:49,425   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sq.o from vendor/easel/esl_sq.c
2023-08-16T21:07:49,427   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_sq.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sq.o
2023-08-16T21:07:49,890   vendor/easel/esl_sq.c: In function ‘esl_sq_Checksum’:
2023-08-16T21:07:49,891   vendor/easel/esl_sq.c:1638:25: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int64_t’ {aka ‘const long long int’} [-Wsign-compare]
2023-08-16T21:07:49,891          for (pos = 0; pos < sq->n; pos++)
2023-08-16T21:07:49,892                            ^
2023-08-16T21:07:49,892   vendor/easel/esl_sq.c:1647:25: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int64_t’ {aka ‘const long long int’} [-Wsign-compare]
2023-08-16T21:07:49,893          for (pos = 1; pos <= sq->n; pos++)
2023-08-16T21:07:49,893                            ^~
2023-08-16T21:07:50,228   vendor/easel/esl_minimizer.c: In function ‘esl_min_ConjugateGradientDescent’:
2023-08-16T21:07:50,229   vendor/easel/esl_minimizer.c:243:23: warning: ‘fx’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:07:50,229      if (opt_fx) *opt_fx = fx;
2023-08-16T21:07:50,230                  ~~~~~~~~^~~~
2023-08-16T21:07:50,231   vendor/easel/esl_minimizer.c:711:18: warning: ‘cx’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:07:50,232      x=v=w= a + c*(b-a);           /* initial guess of x by golden section */
2023-08-16T21:07:50,232                   ~~^~~
2023-08-16T21:07:50,233   vendor/easel/esl_minimizer.c:118:16: note: ‘cx’ was declared here
2023-08-16T21:07:50,234      double ax,bx,cx;
2023-08-16T21:07:50,234                   ^~
2023-08-16T21:07:50,236   vendor/easel/esl_minimizer.c:711:8: warning: ‘ax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:07:50,236      x=v=w= a + c*(b-a);           /* initial guess of x by golden section */
2023-08-16T21:07:50,237          ~^~~~~~~~~~~~~
2023-08-16T21:07:50,251   vendor/easel/esl_minimizer.c:118:10: note: ‘ax’ was declared here
2023-08-16T21:07:50,251      double ax,bx,cx;
2023-08-16T21:07:50,252             ^~
2023-08-16T21:07:51,465   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_alphabet.o from vendor/easel/esl_alphabet.c
2023-08-16T21:07:51,467   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_alphabet.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_alphabet.o
2023-08-16T21:07:51,488   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_heap.o from vendor/easel/esl_heap.c
2023-08-16T21:07:51,493   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_heap.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_heap.o
2023-08-16T21:07:51,818   vendor/easel/esl_alphabet.c: In function ‘esl_alphabet_CreateCustom’:
2023-08-16T21:07:51,819   vendor/easel/esl_alphabet.c:107:24: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:07:51,820      if (strlen(alphabet) != Kp) ESL_XEXCEPTION(eslEINVAL, "alphabet length != Kp");
2023-08-16T21:07:51,821                           ^~
2023-08-16T21:07:52,372   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_psiblast.o from vendor/easel/esl_msafile_psiblast.c
2023-08-16T21:07:52,375   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msafile_psiblast.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_psiblast.o
2023-08-16T21:07:54,358   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_neon.o from vendor/easel/esl_neon.c
2023-08-16T21:07:54,359   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_neon.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_neon.o
2023-08-16T21:07:54,475   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_buffer.o from vendor/easel/esl_buffer.c
2023-08-16T21:07:54,478   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_buffer.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_buffer.o
2023-08-16T21:07:55,240   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_regexp.o from vendor/easel/esl_regexp.c
2023-08-16T21:07:55,242   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_regexp.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_regexp.o
2023-08-16T21:07:55,405   generating build/temp.linux-armv7l-cpython-37/vendor/easel/easel.o from vendor/easel/easel.c
2023-08-16T21:07:55,405   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/easel.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/easel.o
2023-08-16T21:07:55,926   vendor/easel/easel.c: In function ‘esl_FileNewSuffix’:
2023-08-16T21:07:55,927   vendor/easel/easel.c:1942:46: warning: operand of ?: changes signedness from ‘int’ to ‘size_t’ {aka ‘unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-08-16T21:07:55,928      nf = (lastdot == NULL)? strlen(filename) : lastdot-filename;
2023-08-16T21:07:55,929                                                 ^~~~~~~~~~~~~~~~
2023-08-16T21:07:56,141   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_avx.o from vendor/easel/esl_avx.c
2023-08-16T21:07:56,141   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_avx.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_avx.o
2023-08-16T21:07:56,420   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_hyperexp.o from vendor/easel/esl_hyperexp.c
2023-08-16T21:07:56,421   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_hyperexp.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_hyperexp.o
2023-08-16T21:07:57,011   vendor/easel/esl_regexp.c: In function ‘regbranch’:
2023-08-16T21:07:57,013   vendor/easel/esl_regexp.c:793:6: warning: ‘flags’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:07:57,013     int flags;
2023-08-16T21:07:57,014         ^~~~~
2023-08-16T21:07:57,833   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dmatrix.o from vendor/easel/esl_dmatrix.c
2023-08-16T21:07:57,835   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_dmatrix.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dmatrix.o
2023-08-16T21:07:59,046   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_rootfinder.o from vendor/easel/esl_rootfinder.c
2023-08-16T21:07:59,047   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_rootfinder.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_rootfinder.o
2023-08-16T21:07:59,290   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gamma.o from vendor/easel/esl_gamma.c
2023-08-16T21:07:59,293   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_gamma.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gamma.o
2023-08-16T21:07:59,437   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_weibull.o from vendor/easel/esl_weibull.c
2023-08-16T21:07:59,438   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_weibull.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_weibull.o
2023-08-16T21:07:59,981   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_phylip.o from vendor/easel/esl_msafile_phylip.c
2023-08-16T21:07:59,982   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msafile_phylip.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_phylip.o
2023-08-16T21:08:00,640   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_cluster.o from vendor/easel/esl_cluster.c
2023-08-16T21:08:00,642   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_cluster.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_cluster.o
2023-08-16T21:08:00,932   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stopwatch.o from vendor/easel/esl_stopwatch.c
2023-08-16T21:08:00,934   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_stopwatch.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stopwatch.o
2023-08-16T21:08:00,960   vendor/easel/esl_cluster.c: In function ‘esl_cluster_SingleLinkage’:
2023-08-16T21:08:00,960   vendor/easel/esl_cluster.c:151:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:00,961       for (v = 0; v < n; v++) a[v] = n-v-1; /* initialize by pushing all vertices onto available list (backwards) */
2023-08-16T21:08:00,962                     ^
2023-08-16T21:08:01,224   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mixdchlet.o from vendor/easel/esl_mixdchlet.c
2023-08-16T21:08:01,226   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_mixdchlet.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mixdchlet.o
2023-08-16T21:08:01,300   vendor/easel/esl_stopwatch.c:15:15: warning: ‘stopwatch_getRealTime’ declared ‘static’ but never defined [-Wunused-function]
2023-08-16T21:08:01,301    static double stopwatch_getRealTime(void);
2023-08-16T21:08:01,302                  ^~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:01,742   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_varint.o from vendor/easel/esl_varint.c
2023-08-16T21:08:01,744   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_varint.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_varint.o
2023-08-16T21:08:01,781   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_scorematrix.o from vendor/easel/esl_scorematrix.c
2023-08-16T21:08:01,783   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_scorematrix.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_scorematrix.o
2023-08-16T21:08:02,679   vendor/easel/esl_varint.c: In function ‘esl_varint_google_decode’:
2023-08-16T21:08:02,680   vendor/easel/esl_varint.c:471:11: warning: ‘grp’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:08:02,680      if (grp & cmask) { status = eslEOD; goto ERROR; }
2023-08-16T21:08:02,681          ~~~~^~~~~~~
2023-08-16T21:08:02,881   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_getopts.o from vendor/easel/esl_getopts.c
2023-08-16T21:08:02,882   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_getopts.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_getopts.o
2023-08-16T21:08:03,305   vendor/easel/esl_getopts.c: In function ‘get_optidx_abbrev’:
2023-08-16T21:08:03,305   vendor/easel/esl_getopts.c:1391:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:03,306     if (n == strlen(g->opt[i].name)) { nexact++; break; } /* an exact match; can stop now (xref bug #e4) */
2023-08-16T21:08:03,306           ^~
2023-08-16T21:08:03,584   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_red_black.o from vendor/easel/esl_red_black.c
2023-08-16T21:08:03,586   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_red_black.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_red_black.o
2023-08-16T21:08:04,076   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sqio.o from vendor/easel/esl_sqio.c
2023-08-16T21:08:04,078   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_sqio.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sqio.o
2023-08-16T21:08:04,584   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_clustal.o from vendor/easel/esl_msafile_clustal.c
2023-08-16T21:08:04,586   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msafile_clustal.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_clustal.o
2023-08-16T21:08:05,914   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_composition.o from vendor/easel/esl_composition.c
2023-08-16T21:08:05,916   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_composition.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_composition.o
2023-08-16T21:08:06,463   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_avx512.o from vendor/easel/esl_avx512.c
2023-08-16T21:08:06,465   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_avx512.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_avx512.o
2023-08-16T21:08:06,531   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_a2m.o from vendor/easel/esl_msafile_a2m.c
2023-08-16T21:08:06,533   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msafile_a2m.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_a2m.o
2023-08-16T21:08:06,751   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_lognormal.o from vendor/easel/esl_lognormal.c
2023-08-16T21:08:06,753   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_lognormal.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_lognormal.o
2023-08-16T21:08:07,107   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_recorder.o from vendor/easel/esl_recorder.c
2023-08-16T21:08:07,110   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_recorder.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_recorder.o
2023-08-16T21:08:07,579   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_ssi.o from vendor/easel/esl_ssi.c
2023-08-16T21:08:07,581   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_ssi.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_ssi.o
2023-08-16T21:08:07,709   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mem.o from vendor/easel/esl_mem.c
2023-08-16T21:08:07,712   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_mem.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mem.o
2023-08-16T21:08:07,928   vendor/easel/esl_ssi.c: In function ‘esl_ssi_FindNumber’:
2023-08-16T21:08:07,929   vendor/easel/esl_ssi.c:261:12: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:07,929      if (nkey >= ssi->nprimary) { status = eslENOTFOUND; goto ERROR; }
2023-08-16T21:08:07,930               ^~
2023-08-16T21:08:07,952   vendor/easel/esl_ssi.c: In function ‘esl_newssi_AddFile’:
2023-08-16T21:08:07,953   vendor/easel/esl_ssi.c:728:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:07,954      if ((n+1) > ns->flen) ns->flen = n+1;
2023-08-16T21:08:07,954                ^
2023-08-16T21:08:07,961   vendor/easel/esl_ssi.c: In function ‘esl_newssi_AddKey’:
2023-08-16T21:08:07,962   vendor/easel/esl_ssi.c:862:9: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:07,962      if (n > ns->plen) ns->plen = n;
2023-08-16T21:08:07,963            ^
2023-08-16T21:08:07,965   vendor/easel/esl_ssi.c:893:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:07,966     for (i = ns->nprimary; i < ns->nprimary + eslSSI_KCHUNK; i++)
2023-08-16T21:08:07,967                              ^
2023-08-16T21:08:07,968   vendor/easel/esl_ssi.c: In function ‘esl_newssi_AddAlias’:
2023-08-16T21:08:07,968   vendor/easel/esl_ssi.c:941:9: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:07,969      if (n > ns->slen) ns->slen = n;
2023-08-16T21:08:07,969            ^
2023-08-16T21:08:07,972   vendor/easel/esl_ssi.c:957:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:07,973     for (i = ns->nsecondary; i < ns->nsecondary+eslSSI_KCHUNK; i++) {
2023-08-16T21:08:07,973                                ^
2023-08-16T21:08:07,984   vendor/easel/esl_ssi.c: In function ‘esl_newssi_Write’:
2023-08-16T21:08:07,985   vendor/easel/esl_ssi.c:1143:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:07,985          for (i = 0; i < ns->nprimary; i++)
2023-08-16T21:08:07,986                        ^
2023-08-16T21:08:07,987   vendor/easel/esl_ssi.c:1161:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:07,988          for (i = 0; i < ns->nprimary; i++)
2023-08-16T21:08:07,988                        ^
2023-08-16T21:08:07,992   vendor/easel/esl_ssi.c:1181:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:07,993          for (i = 0; i < ns->nsecondary; i++)
2023-08-16T21:08:07,993                        ^
2023-08-16T21:08:07,997   vendor/easel/esl_ssi.c:1198:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:07,998          for (i = 0; i < ns->nsecondary; i++)
2023-08-16T21:08:07,998                        ^
2023-08-16T21:08:08,007   vendor/easel/esl_ssi.c: In function ‘esl_newssi_Close’:
2023-08-16T21:08:08,008   vendor/easel/esl_ssi.c:1247:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:08,009       for (i = 0; i < ns->nprimary; i++)
2023-08-16T21:08:08,010                     ^
2023-08-16T21:08:08,013   vendor/easel/esl_ssi.c:1253:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:08,013       for (i = 0; i < ns->nsecondary; i++)
2023-08-16T21:08:08,014                     ^
2023-08-16T21:08:08,026   vendor/easel/esl_ssi.c: In function ‘activate_external_sort’:
2023-08-16T21:08:08,027   vendor/easel/esl_ssi.c:1345:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:08,028      for (i = 0; i < ns->nprimary; i++) {
2023-08-16T21:08:08,029                    ^
2023-08-16T21:08:08,032   vendor/easel/esl_ssi.c:1364:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:08,032      for (i = 0; i < ns->nsecondary; i++)
2023-08-16T21:08:08,033                    ^
2023-08-16T21:08:08,036   vendor/easel/esl_ssi.c:1370:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:08,036      for (i = 0; i < ns->nprimary;   i++) free(ns->pkeys[i].key);
2023-08-16T21:08:08,037                    ^
2023-08-16T21:08:08,039   vendor/easel/esl_ssi.c:1371:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:08,039      for (i = 0; i < ns->nsecondary; i++) free(ns->skeys[i].key);
2023-08-16T21:08:08,040                    ^
2023-08-16T21:08:08,042   vendor/easel/esl_ssi.c:1372:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:08,043      for (i = 0; i < ns->nsecondary; i++) free(ns->skeys[i].pkey);
2023-08-16T21:08:08,043                    ^
2023-08-16T21:08:08,541   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_arr3.o from vendor/easel/esl_arr3.c
2023-08-16T21:08:08,541   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_arr3.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_arr3.o
2023-08-16T21:08:09,121   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mpi.o from vendor/easel/esl_mpi.c
2023-08-16T21:08:09,121   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_mpi.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mpi.o
2023-08-16T21:08:09,551   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_bitfield.o from vendor/easel/esl_bitfield.c
2023-08-16T21:08:09,554   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_bitfield.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_bitfield.o
2023-08-16T21:08:09,846   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msacluster.o from vendor/easel/esl_msacluster.c
2023-08-16T21:08:09,849   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msacluster.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msacluster.o
2023-08-16T21:08:10,171   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_swat.o from vendor/easel/esl_swat.c
2023-08-16T21:08:10,172   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_swat.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_swat.o
2023-08-16T21:08:10,399   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stack.o from vendor/easel/esl_stack.c
2023-08-16T21:08:10,402   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_stack.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stack.o
2023-08-16T21:08:10,688   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_vmx.o from vendor/easel/esl_vmx.c
2023-08-16T21:08:10,690   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_vmx.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_vmx.o
2023-08-16T21:08:10,906   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_keyhash.o from vendor/easel/esl_keyhash.c
2023-08-16T21:08:10,908   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_keyhash.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_keyhash.o
2023-08-16T21:08:10,992   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stretchexp.o from vendor/easel/esl_stretchexp.c
2023-08-16T21:08:10,994   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_stretchexp.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stretchexp.o
2023-08-16T21:08:11,255   vendor/easel/esl_keyhash.c: In function ‘esl_keyhash_Clone’:
2023-08-16T21:08:11,255   vendor/easel/esl_keyhash.c:94:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘const unsigned int’} [-Wsign-compare]
2023-08-16T21:08:11,256      for (h = 0; h < kh->hashsize; h++)
2023-08-16T21:08:11,257                    ^
2023-08-16T21:08:11,257   vendor/easel/esl_keyhash.c: In function ‘esl_keyhash_Reuse’:
2023-08-16T21:08:11,258   vendor/easel/esl_keyhash.c:171:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:11,258      for (i = 0; i < kh->hashsize; i++) kh->hashtable[i] = -1;
2023-08-16T21:08:11,259                    ^
2023-08-16T21:08:11,260   vendor/easel/esl_keyhash.c: In function ‘esl_keyhash_Dump’:
2023-08-16T21:08:11,260   vendor/easel/esl_keyhash.c:215:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘const unsigned int’} [-Wsign-compare]
2023-08-16T21:08:11,261      for (h = 0; h < kh->hashsize; h++)
2023-08-16T21:08:11,262                    ^
2023-08-16T21:08:11,271   vendor/easel/esl_keyhash.c: In function ‘esl_keyhash_Store’:
2023-08-16T21:08:11,272   vendor/easel/esl_keyhash.c:310:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:11,272      if (kh->nkeys > 3*kh->hashsize)
2023-08-16T21:08:11,273                    ^
2023-08-16T21:08:11,273   vendor/easel/esl_keyhash.c: In function ‘keyhash_create’:
2023-08-16T21:08:11,275   vendor/easel/esl_keyhash.c:401:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:11,276      for (i = 0; i < kh->hashsize; i++)  kh->hashtable[i] = -1;
2023-08-16T21:08:11,276                    ^
2023-08-16T21:08:11,277   vendor/easel/esl_keyhash.c: In function ‘key_upsize’:
2023-08-16T21:08:11,278   vendor/easel/esl_keyhash.c:491:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:11,279      for (i = 0; i < kh->hashsize; i++) kh->hashtable[i] = -1;
2023-08-16T21:08:11,280                    ^
2023-08-16T21:08:12,184   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_paml.o from vendor/easel/esl_paml.c
2023-08-16T21:08:12,185   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_paml.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_paml.o
2023-08-16T21:08:12,271   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msa.o from vendor/easel/esl_msa.c
2023-08-16T21:08:12,273   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_msa.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msa.o
2023-08-16T21:08:12,361   generating build/temp.linux-armv7l-cpython-37/build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.o from build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c
2023-08-16T21:08:12,362   creating build/temp.linux-armv7l-cpython-37/build
2023-08-16T21:08:12,364   creating build/temp.linux-armv7l-cpython-37/build/temp.linux-armv7l-cpython-37
2023-08-16T21:08:12,366   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c -o build/temp.linux-armv7l-cpython-37/build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.o
2023-08-16T21:08:12,835   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c: In function ‘sqascii_Echo’:
2023-08-16T21:08:12,836   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1671:60: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:12,837          if (fwrite(ascii->buf, sizeof(char), ascii->nc, ofp) != ascii->nc) ESL_EXCEPTION(eslESYS, "fwrite() failed");
2023-08-16T21:08:12,838                                                               ^~
2023-08-16T21:08:12,846   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_json.o from vendor/easel/esl_json.c
2023-08-16T21:08:12,848   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_json.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_json.o
2023-08-16T21:08:21,421   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_hmm.o from vendor/easel/esl_hmm.c
2023-08-16T21:08:21,423   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_hmm.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_hmm.o
2023-08-16T21:08:21,736   In file included from vendor/easel/esl_hmm.c:9:
2023-08-16T21:08:21,737   vendor/easel/esl_hmm.c: In function ‘esl_hmx_GrowTo’:
2023-08-16T21:08:21,738   vendor/easel/easel.h:431:36: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:21,739    #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-08-16T21:08:21,739                                       ^
2023-08-16T21:08:21,739   vendor/easel/esl_hmm.c:265:20: note: in expansion of macro ‘ESL_MIN’
2023-08-16T21:08:21,740          mx->validR = ESL_MIN(mx->ncells / mx->allocM, mx->allocR);
2023-08-16T21:08:21,740                       ^~~~~~~
2023-08-16T21:08:21,740   vendor/easel/easel.h:431:46: warning: operand of ?: changes signedness from ‘int’ to ‘uint64_t’ {aka ‘long long unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-08-16T21:08:21,741    #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-08-16T21:08:21,741                                                 ^~~
2023-08-16T21:08:21,742   vendor/easel/esl_hmm.c:265:20: note: in expansion of macro ‘ESL_MIN’
2023-08-16T21:08:21,742          mx->validR = ESL_MIN(mx->ncells / mx->allocM, mx->allocR);
2023-08-16T21:08:21,742                       ^~~~~~~
2023-08-16T21:08:23,364   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_histogram.o from vendor/easel/esl_histogram.c
2023-08-16T21:08:23,365   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_histogram.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_histogram.o
2023-08-16T21:08:23,681   vendor/easel/esl_histogram.c: In function ‘esl_histogram_GetRank’:
2023-08-16T21:08:23,682   vendor/easel/esl_histogram.c:541:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:23,682      if (rank > h->n)
2023-08-16T21:08:23,683               ^
2023-08-16T21:08:26,283   generating build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mixgev.o from vendor/easel/esl_mixgev.c
2023-08-16T21:08:26,285   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/easel/esl_mixgev.c -o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mixgev.o
2023-08-16T21:08:27,887   arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-37/libeasel.a build/temp.linux-armv7l-cpython-37/vendor/easel/esl_threads.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_huffman.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_exponential.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_random.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_graph.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_iset.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile2.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gencode.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msaweight.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dsqdata.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_vectorops.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gumbel.o build/temp.linux-armv7l-cpython-37/vendor/easel/interface_lapack.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_arr2.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_fileparser.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_selex.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_randomseq.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_tree.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stats.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_wuss.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_ratematrix.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_subcmd.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_workqueue.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_quicksort.o build/temp.linux-armv7l-cpython-37/vendor/easel/interface_gsl.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_cpu.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_afa.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_rand64.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dirichlet.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_normal.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sse.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msashuffle.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gev.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_distance.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_minimizer.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_stockholm.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_alloc.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sq.o build/temp.linux-armv7l-cpython-37/vendor/easel/easel.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_rootfinder.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_phylip.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_matrixops.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sqio_ncbi.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_alphabet.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_regexp.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_gamma.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stopwatch.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_heap.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_psiblast.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_neon.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_avx.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_hyperexp.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_weibull.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_buffer.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_dmatrix.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_scorematrix.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_composition.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_a2m.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msacluster.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_cluster.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mixdchlet.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_red_black.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msafile_clustal.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mem.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stack.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_varint.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_getopts.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_recorder.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_arr3.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mpi.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_bitfield.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_sqio.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_avx512.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_lognormal.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_ssi.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_paml.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_json.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_swat.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_stretchexp.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_msa.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_hmm.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_histogram.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_mixgev.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_vmx.o build/temp.linux-armv7l-cpython-37/vendor/easel/esl_keyhash.o build/temp.linux-armv7l-cpython-37/build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.o
2023-08-16T21:08:28,456   generating build/temp.linux-armv7l-cpython-37/libhmmer.a from vendor/hmmer/src/build.c, vendor/hmmer/src/cachedb.c, vendor/hmmer/src/cachedb_shard.c, vendor/hmmer/src/emit.c, vendor/hmmer/src/errors.c, vendor/hmmer/src/evalues.c, vendor/hmmer/src/eweight.c, vendor/hmmer/src/generic_decoding.c, vendor/hmmer/src/generic_fwdback.c, vendor/hmmer/src/generic_fwdback_chk.c, vendor/hmmer/src/generic_fwdback_banded.c, vendor/hmmer/src/generic_null2.c, vendor/hmmer/src/generic_msv.c, vendor/hmmer/src/generic_optacc.c, vendor/hmmer/src/generic_stotrace.c, vendor/hmmer/src/generic_viterbi.c, vendor/hmmer/src/generic_vtrace.c, vendor/hmmer/src/h2_io.c, vendor/hmmer/src/heatmap.c, vendor/hmmer/src/hmmlogo.c, vendor/hmmer/src/hmmdmstr.c, vendor/hmmer/src/hmmdmstr_shard.c, vendor/hmmer/src/hmmd_search_status.c, vendor/hmmer/src/hmmdwrkr.c, vendor/hmmer/src/hmmdwrkr_shard.c, vendor/hmmer/src/hmmdutils.c, vendor/hmmer/src/hmmer.c, vendor/hmmer/src/logsum.c, vendor/hmmer/src/modelconfig.c, vendor/hmmer/src/modelstats.c, vendor/hmmer/src/mpisupport.c, vendor/hmmer/src/seqmodel.c, vendor/hmmer/src/tracealign.c, vendor/hmmer/src/p7_alidisplay.c, vendor/hmmer/src/p7_bg.c, vendor/hmmer/src/p7_builder.c, vendor/hmmer/src/p7_domain.c, vendor/hmmer/src/p7_domaindef.c, vendor/hmmer/src/p7_gbands.c, vendor/hmmer/src/p7_gmx.c, vendor/hmmer/src/p7_gmxb.c, vendor/hmmer/src/p7_gmxchk.c, vendor/hmmer/src/p7_hit.c, vendor/hmmer/src/p7_hmm.c, vendor/hmmer/src/p7_hmmcache.c, vendor/hmmer/src/p7_hmmd_search_stats.c, vendor/hmmer/src/p7_hmmfile.c, vendor/hmmer/src/p7_hmmwindow.c, vendor/hmmer/src/p7_pipeline.c, vendor/hmmer/src/p7_prior.c, vendor/hmmer/src/p7_profile.c, vendor/hmmer/src/p7_spensemble.c, vendor/hmmer/src/p7_tophits.c, vendor/hmmer/src/p7_trace.c, vendor/hmmer/src/p7_scoredata.c, vendor/hmmer/src/hmmpgmd2msa.c, vendor/hmmer/src/fm_alphabet.c, vendor/hmmer/src/fm_general.c, vendor/hmmer/src/fm_sse.c, vendor/hmmer/src/fm_ssv.c
2023-08-16T21:08:28,457   generating build/temp.linux-armv7l-cpython-37/p7_hmmfile.c from vendor/hmmer/src/p7_hmmfile.c
2023-08-16T21:08:28,496   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/build.o from vendor/hmmer/src/build.c
2023-08-16T21:08:28,497   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_viterbi.o from vendor/hmmer/src/generic_viterbi.c
2023-08-16T21:08:28,498   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback_banded.o from vendor/hmmer/src/generic_fwdback_banded.c
2023-08-16T21:08:28,498   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/evalues.o from vendor/hmmer/src/evalues.c
2023-08-16T21:08:28,500   creating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src
2023-08-16T21:08:28,500   creating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src
2023-08-16T21:08:28,503   creating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src
2023-08-16T21:08:28,504   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_viterbi.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_viterbi.o
2023-08-16T21:08:28,514   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/evalues.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/evalues.o
2023-08-16T21:08:28,516   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_fwdback_banded.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback_banded.o
2023-08-16T21:08:28,518   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/build.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/build.o
2023-08-16T21:08:30,163   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_null2.o from vendor/hmmer/src/generic_null2.c
2023-08-16T21:08:30,165   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_null2.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_null2.o
2023-08-16T21:08:30,655   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_vtrace.o from vendor/hmmer/src/generic_vtrace.c
2023-08-16T21:08:30,657   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_vtrace.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_vtrace.o
2023-08-16T21:08:30,763   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/eweight.o from vendor/hmmer/src/eweight.c
2023-08-16T21:08:30,765   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/eweight.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/eweight.o
2023-08-16T21:08:31,019   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/cachedb.o from vendor/hmmer/src/cachedb.c
2023-08-16T21:08:31,022   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/cachedb.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/cachedb.o
2023-08-16T21:08:32,018   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_msv.o from vendor/hmmer/src/generic_msv.c
2023-08-16T21:08:32,021   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_msv.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_msv.o
2023-08-16T21:08:32,150   vendor/hmmer/src/cachedb.c: In function ‘p7_seqcache_Open’:
2023-08-16T21:08:32,151   vendor/hmmer/src/cachedb.c:95:14: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare]
2023-08-16T21:08:32,151      if (db_cnt > (sizeof(db_inx)/sizeof(db_inx[0])))      return eslEFORMAT;
2023-08-16T21:08:32,152                 ^
2023-08-16T21:08:32,158   vendor/hmmer/src/cachedb.c:157:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:32,159        if (inx >= seq_cnt)       { printf("inx: %d\n", inx); return eslEFORMAT; }
2023-08-16T21:08:32,159                ^~
2023-08-16T21:08:32,160   vendor/hmmer/src/cachedb.c:158:19: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:32,161        if (sq->n + 1 > res_size) { printf("inx: %d size %d %d\n", inx, (int)sq->n + 1, (int)res_size); return eslEFORMAT; }
2023-08-16T21:08:32,161                      ^
2023-08-16T21:08:32,162   vendor/hmmer/src/cachedb.c:179:16: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:32,162        if (db_key >= (1 << (db_cnt + 1))) { printf("inx: %d db %d %s\n", inx, db_key, sq->desc); return eslEFORMAT; }
2023-08-16T21:08:32,163                   ^~
2023-08-16T21:08:32,164   vendor/hmmer/src/cachedb.c:212:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:32,164      if (inx != seq_cnt) { printf("inx:: %d %" PRIu64 "\n", inx, seq_cnt);  return eslEFORMAT; }
2023-08-16T21:08:32,165              ^~
2023-08-16T21:08:32,165   vendor/hmmer/src/cachedb.c:222:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:32,166      for (i = 0 ; i < seq_cnt; ++i) {
2023-08-16T21:08:32,166                     ^
2023-08-16T21:08:32,167   vendor/hmmer/src/cachedb.c:230:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:32,168      for (i = 0 ; i < seq_cnt; ++i) {
2023-08-16T21:08:32,168                     ^
2023-08-16T21:08:32,169   vendor/hmmer/src/cachedb.c:236:25: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:32,169            if (db_inx[inx] >= db->count) { printf("sort:: %d %d\n", db_inx[inx], db->count); return eslEFORMAT; }
2023-08-16T21:08:32,170                            ^~
2023-08-16T21:08:32,170   vendor/hmmer/src/cachedb.c:246:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:32,170      for (i = 0; i < cache->db_cnt; ++i) {
2023-08-16T21:08:32,172                    ^
2023-08-16T21:08:32,174   vendor/hmmer/src/cachedb.c: In function ‘p7_seqcache_Close’:
2023-08-16T21:08:32,175   vendor/hmmer/src/cachedb.c:284:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:32,175          for (i = 0; i < cache->db_cnt; ++i) {
2023-08-16T21:08:32,176                        ^
2023-08-16T21:08:32,322   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_decoding.o from vendor/hmmer/src/generic_decoding.c
2023-08-16T21:08:32,324   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_decoding.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_decoding.o
2023-08-16T21:08:32,581   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/h2_io.o from vendor/hmmer/src/h2_io.c
2023-08-16T21:08:32,583   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/h2_io.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/h2_io.o
2023-08-16T21:08:33,498   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/cachedb_shard.o from vendor/hmmer/src/cachedb_shard.c
2023-08-16T21:08:33,501   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/cachedb_shard.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/cachedb_shard.o
2023-08-16T21:08:33,718   vendor/hmmer/src/h2_io.c: In function ‘h2_multiline’:
2023-08-16T21:08:33,719   vendor/hmmer/src/h2_io.c:213:40: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:33,719     if (fwrite(sptr, sizeof(char), n, fp) != n) ESL_EXCEPTION_SYS(eslEWRITE, "h2 profile write failed");   /* using fwrite lets us write fixed # of chars   */
2023-08-16T21:08:33,720                                           ^~
2023-08-16T21:08:34,026   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_optacc.o from vendor/hmmer/src/generic_optacc.c
2023-08-16T21:08:34,029   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_optacc.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_optacc.o
2023-08-16T21:08:34,056   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback.o from vendor/hmmer/src/generic_fwdback.c
2023-08-16T21:08:34,060   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_fwdback.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback.o
2023-08-16T21:08:34,709   vendor/hmmer/src/cachedb_shard.c: In function ‘p7_seqcache_Open_master’:
2023-08-16T21:08:34,710   vendor/hmmer/src/cachedb_shard.c:117:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:34,711      for (i = 0; i < db_cnt; ++i) {
2023-08-16T21:08:34,711                    ^
2023-08-16T21:08:34,714   vendor/hmmer/src/cachedb_shard.c:159:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:34,715      for (i = 0; i < db_cnt; ++i) db_inx[i] = 0;
2023-08-16T21:08:34,715                    ^
2023-08-16T21:08:34,716   vendor/hmmer/src/cachedb_shard.c:167:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:34,716        if (inx >= seq_cnt)       { printf("inx: %d\n", inx); return eslEFORMAT; }
2023-08-16T21:08:34,717                ^~
2023-08-16T21:08:34,717   vendor/hmmer/src/cachedb_shard.c:191:16: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:34,718        if (db_key >= (1 << (db_cnt + 1))) { printf("inx: %d db_cnt %d db %d %s\n", inx, db_cnt, db_key, sq->desc); return eslEFORMAT; }
2023-08-16T21:08:34,718                   ^~
2023-08-16T21:08:34,719   vendor/hmmer/src/cachedb_shard.c:225:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:34,720      if (inx != seq_cnt) { printf("inx:: %d %" PRIu64 "\n", inx, seq_cnt);  return eslEFORMAT; }
2023-08-16T21:08:34,720              ^~
2023-08-16T21:08:34,721   vendor/hmmer/src/cachedb_shard.c:235:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:34,722      for (i = 0 ; i < seq_cnt; ++i) {
2023-08-16T21:08:34,722                     ^
2023-08-16T21:08:34,723   vendor/hmmer/src/cachedb_shard.c:243:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:34,724      for (i = 0 ; i < seq_cnt; ++i) {
2023-08-16T21:08:34,724                     ^
2023-08-16T21:08:34,725   vendor/hmmer/src/cachedb_shard.c:259:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:34,725      for (i = 0; i < cache->db_cnt; ++i) {
2023-08-16T21:08:34,725                    ^
2023-08-16T21:08:34,726   vendor/hmmer/src/cachedb_shard.c:282:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:34,726      for (i = 0; i < db_cnt; ++i) {
2023-08-16T21:08:34,727                    ^
2023-08-16T21:08:34,727   vendor/hmmer/src/cachedb_shard.c: In function ‘p7_seqcache_Close_master’:
2023-08-16T21:08:34,728   vendor/hmmer/src/cachedb_shard.c:297:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:34,728          for (i = 0; i < cache->db_cnt; ++i) {
2023-08-16T21:08:34,729                        ^
2023-08-16T21:08:34,761   vendor/hmmer/src/cachedb_shard.c: In function ‘p7_seqcache_Open_shard’:
2023-08-16T21:08:34,762   vendor/hmmer/src/cachedb_shard.c:388:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:34,762      for (i = 0; i < db_cnt; ++i) {
2023-08-16T21:08:34,764                    ^
2023-08-16T21:08:34,764   vendor/hmmer/src/cachedb_shard.c:398:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:34,765      for (i = 0; i < db_cnt; i++){
2023-08-16T21:08:34,766                    ^
2023-08-16T21:08:34,767   vendor/hmmer/src/cachedb_shard.c:434:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:34,768      for (i = 0; i < db_cnt; ++i) db_inx[i] = 0;
2023-08-16T21:08:34,768                    ^
2023-08-16T21:08:34,769   vendor/hmmer/src/cachedb_shard.c:445:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:34,769        if (inx >= seq_cnt)       { printf("inx: %d\n", inx); return eslEFORMAT; }
2023-08-16T21:08:34,770                ^~
2023-08-16T21:08:34,770   vendor/hmmer/src/cachedb_shard.c:446:19: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:34,771        if (sq->n + 1 > res_size) { printf("inx: %d size %d %d\n", inx, (int)sq->n + 1, (int)res_size); return eslEFORMAT; }
2023-08-16T21:08:34,772                      ^
2023-08-16T21:08:34,773   vendor/hmmer/src/cachedb_shard.c:463:41: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:34,774            if(db_seq_count[i] % num_shards == my_shard){ //this sequence is part of database i and belongs to this node's shard
2023-08-16T21:08:34,774                                            ^~
2023-08-16T21:08:34,775   vendor/hmmer/src/cachedb_shard.c:475:16: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:34,776        if (db_key >= (1 << (db_cnt + 1))) { printf("inx: %d db %d %s\n", inx, db_key, sq->desc); return eslEFORMAT; }
2023-08-16T21:08:34,776                   ^~
2023-08-16T21:08:34,777   vendor/hmmer/src/cachedb_shard.c:544:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:34,777      for(i = 0; i < db_cnt; i++){
2023-08-16T21:08:34,778                   ^
2023-08-16T21:08:34,778   vendor/hmmer/src/cachedb_shard.c:560:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:34,779      for (i = 0 ; i < seq_cnt; ++i) {
2023-08-16T21:08:34,779                     ^
2023-08-16T21:08:34,779   vendor/hmmer/src/cachedb_shard.c:568:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:34,780      for (i = 0 ; i < seq_cnt; ++i) {
2023-08-16T21:08:34,780                     ^
2023-08-16T21:08:34,791   vendor/hmmer/src/cachedb_shard.c:585:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:34,792      for (i = 0; i < cache->db_cnt; ++i) {
2023-08-16T21:08:34,793                    ^
2023-08-16T21:08:34,793   vendor/hmmer/src/cachedb_shard.c:615:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:34,794      for (i = 0; i < db_cnt; ++i) {
2023-08-16T21:08:34,795                    ^
2023-08-16T21:08:34,888   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/heatmap.o from vendor/hmmer/src/heatmap.c
2023-08-16T21:08:34,891   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/heatmap.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/heatmap.o
2023-08-16T21:08:35,526   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmlogo.o from vendor/hmmer/src/hmmlogo.c
2023-08-16T21:08:35,528   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/hmmlogo.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmlogo.o
2023-08-16T21:08:36,430   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback_chk.o from vendor/hmmer/src/generic_fwdback_chk.c
2023-08-16T21:08:36,435   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_fwdback_chk.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback_chk.o
2023-08-16T21:08:36,701   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_stotrace.o from vendor/hmmer/src/generic_stotrace.c
2023-08-16T21:08:36,703   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/generic_stotrace.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_stotrace.o
2023-08-16T21:08:37,394   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/emit.o from vendor/hmmer/src/emit.c
2023-08-16T21:08:37,396   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/emit.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/emit.o
2023-08-16T21:08:37,927   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdmstr.o from vendor/hmmer/src/hmmdmstr.c
2023-08-16T21:08:37,929   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/hmmdmstr.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdmstr.o
2023-08-16T21:08:38,084   vendor/hmmer/src/generic_stotrace.c: In function ‘p7_GStochasticTrace’:
2023-08-16T21:08:38,085   vendor/hmmer/src/generic_stotrace.c:175:44: warning: ‘scur’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:08:38,085          if ( (scur == p7T_N || scur == p7T_J || scur == p7T_C) && scur == sprv) i--;
2023-08-16T21:08:38,086               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2023-08-16T21:08:38,120   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdmstr_shard.o from vendor/hmmer/src/hmmdmstr_shard.c
2023-08-16T21:08:38,122   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/hmmdmstr_shard.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdmstr_shard.o
2023-08-16T21:08:38,314   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmd_search_status.o from vendor/hmmer/src/hmmd_search_status.c
2023-08-16T21:08:38,316   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/hmmd_search_status.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmd_search_status.o
2023-08-16T21:08:38,644   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdutils.o from vendor/hmmer/src/hmmdutils.c
2023-08-16T21:08:38,646   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/hmmdutils.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdutils.o
2023-08-16T21:08:38,852   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmer.o from vendor/hmmer/src/hmmer.c
2023-08-16T21:08:38,854   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/hmmer.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmer.o
2023-08-16T21:08:39,904   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdwrkr.o from vendor/hmmer/src/hmmdwrkr.c
2023-08-16T21:08:39,906   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/hmmdwrkr.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdwrkr.o
2023-08-16T21:08:40,101   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/errors.o from vendor/hmmer/src/errors.c
2023-08-16T21:08:40,103   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/errors.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/errors.o
2023-08-16T21:08:40,122   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdwrkr_shard.o from vendor/hmmer/src/hmmdwrkr_shard.c
2023-08-16T21:08:40,124   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/hmmdwrkr_shard.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdwrkr_shard.o
2023-08-16T21:08:40,314   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/mpisupport.o from vendor/hmmer/src/mpisupport.c
2023-08-16T21:08:40,316   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/mpisupport.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/mpisupport.o
2023-08-16T21:08:40,464   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/logsum.o from vendor/hmmer/src/logsum.c
2023-08-16T21:08:40,466   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/logsum.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/logsum.o
2023-08-16T21:08:40,557   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/seqmodel.o from vendor/hmmer/src/seqmodel.c
2023-08-16T21:08:40,559   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/seqmodel.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/seqmodel.o
2023-08-16T21:08:41,462   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_builder.o from vendor/hmmer/src/p7_builder.c
2023-08-16T21:08:41,464   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_builder.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_builder.o
2023-08-16T21:08:41,644   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmxb.o from vendor/hmmer/src/p7_gmxb.c
2023-08-16T21:08:41,647   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_gmxb.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmxb.o
2023-08-16T21:08:41,888   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/modelconfig.o from vendor/hmmer/src/modelconfig.c
2023-08-16T21:08:41,890   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/modelconfig.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/modelconfig.o
2023-08-16T21:08:42,064   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/tracealign.o from vendor/hmmer/src/tracealign.c
2023-08-16T21:08:42,066   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/tracealign.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/tracealign.o
2023-08-16T21:08:43,619   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmxchk.o from vendor/hmmer/src/p7_gmxchk.c
2023-08-16T21:08:43,622   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_gmxchk.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmxchk.o
2023-08-16T21:08:43,894   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/modelstats.o from vendor/hmmer/src/modelstats.c
2023-08-16T21:08:43,896   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/modelstats.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/modelstats.o
2023-08-16T21:08:45,523   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hit.o from vendor/hmmer/src/p7_hit.c
2023-08-16T21:08:45,525   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_hit.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hit.o
2023-08-16T21:08:45,548   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_domain.o from vendor/hmmer/src/p7_domain.c
2023-08-16T21:08:45,553   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_domain.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_domain.o
2023-08-16T21:08:45,830   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmd_search_stats.o from vendor/hmmer/src/p7_hmmd_search_stats.c
2023-08-16T21:08:45,832   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_hmmd_search_stats.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmd_search_stats.o
2023-08-16T21:08:46,668   vendor/hmmer/src/p7_hit.c: In function ‘p7_hit_Serialize’:
2023-08-16T21:08:46,670   vendor/hmmer/src/p7_hit.c:287:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,670      network_64bit = esl_hton64(*((uint64_t *) &(obj->sortkey)));
2023-08-16T21:08:46,671                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,672   vendor/hmmer/src/p7_hit.c:292:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,672      network_32bit = esl_hton32(*((uint32_t *) &(obj->score)));
2023-08-16T21:08:46,673                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,673   vendor/hmmer/src/p7_hit.c:297:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,674      network_32bit = esl_hton32(*((uint32_t *) &(obj->pre_score)));
2023-08-16T21:08:46,674                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,674   vendor/hmmer/src/p7_hit.c:302:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,675      network_32bit = esl_hton32(*((uint32_t *) &(obj->sum_score)));
2023-08-16T21:08:46,675                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,676   vendor/hmmer/src/p7_hit.c:307:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,676      network_64bit = esl_hton64(*((uint64_t *) &(obj->lnP)));
2023-08-16T21:08:46,677                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,677   vendor/hmmer/src/p7_hit.c:312:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,678      network_64bit = esl_hton64(*((uint64_t *) &(obj->pre_lnP)));
2023-08-16T21:08:46,678                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,679   vendor/hmmer/src/p7_hit.c:317:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,679      network_64bit = esl_hton64(*((uint64_t *) &(obj->sum_lnP)));
2023-08-16T21:08:46,680                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,680   vendor/hmmer/src/p7_hit.c:322:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,691      network_32bit = esl_hton32(*((uint32_t *) &(obj->nexpected)));
2023-08-16T21:08:46,692                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,692   vendor/hmmer/src/p7_hit.c:403:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:46,693      if(ptr -(*buf + *n) != ser_size){
2023-08-16T21:08:46,693                          ^~
2023-08-16T21:08:46,694   vendor/hmmer/src/p7_hit.c: In function ‘p7_hit_Deserialize’:
2023-08-16T21:08:46,694   vendor/hmmer/src/p7_hit.c:471:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,694      ret_obj->sortkey = *((double *) &host_64bit);
2023-08-16T21:08:46,695                          ~^~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,696   vendor/hmmer/src/p7_hit.c:477:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,697      ret_obj->score = *((float *) &host_32bit);
2023-08-16T21:08:46,698                        ~^~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,700   vendor/hmmer/src/p7_hit.c:483:26: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,711      ret_obj->pre_score = *((float *) &host_32bit);
2023-08-16T21:08:46,711                            ~^~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,712   vendor/hmmer/src/p7_hit.c:489:26: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,712      ret_obj->sum_score = *((float *) &host_32bit);
2023-08-16T21:08:46,713                            ~^~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,713   vendor/hmmer/src/p7_hit.c:495:20: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,714      ret_obj->lnP = *((double *) &host_64bit);
2023-08-16T21:08:46,714                      ~^~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,715   vendor/hmmer/src/p7_hit.c:501:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,715      ret_obj->pre_lnP = *((double *) &host_64bit);
2023-08-16T21:08:46,716                          ~^~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,716   vendor/hmmer/src/p7_hit.c:507:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,717      ret_obj->sum_lnP = *((double *) &host_64bit);
2023-08-16T21:08:46,717                          ~^~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,718   vendor/hmmer/src/p7_hit.c:513:26: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,718      ret_obj->nexpected = *((float *) &host_32bit);
2023-08-16T21:08:46,719                            ~^~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,719   vendor/hmmer/src/p7_domain.c: In function ‘p7_domain_Serialize’:
2023-08-16T21:08:46,720   vendor/hmmer/src/p7_domain.c:228:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,720      network_32bit = esl_hton32(*((uint32_t *) &(obj->envsc)));  // ow, this hurts, but is probably the best way to get the
2023-08-16T21:08:46,731                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,732   vendor/hmmer/src/p7_domain.c:235:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,732      network_32bit = esl_hton32(*((uint32_t *) &(obj->domcorrection)));
2023-08-16T21:08:46,733                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,734   vendor/hmmer/src/p7_domain.c:240:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,735      network_32bit = esl_hton32(*((uint32_t *) &(obj->dombias)));
2023-08-16T21:08:46,735                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,736   vendor/hmmer/src/p7_domain.c:245:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,736      network_32bit = esl_hton32(*((uint32_t *) &(obj->oasc)));
2023-08-16T21:08:46,737                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,737   vendor/hmmer/src/p7_domain.c:250:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,738      network_32bit = esl_hton32(*((uint32_t *) &(obj->bitscore)));
2023-08-16T21:08:46,738                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,739   vendor/hmmer/src/p7_domain.c:255:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,739      network_64bit = esl_hton64(*((uint64_t *) &(obj->lnP)));
2023-08-16T21:08:46,740                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,740   vendor/hmmer/src/p7_hit.c:621:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:46,751      if((ptr - (buf + *n)) !=obj_size){
2023-08-16T21:08:46,751                            ^~
2023-08-16T21:08:46,752   vendor/hmmer/src/p7_domain.c:290:16: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:46,753      if (ser_size != ptr - (*buf + *n)){
2023-08-16T21:08:46,753                   ^~
2023-08-16T21:08:46,753   vendor/hmmer/src/p7_domain.c: In function ‘p7_domain_Deserialize’:
2023-08-16T21:08:46,754   vendor/hmmer/src/p7_domain.c:379:22: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,754      ret_obj->envsc = *((float *) &host_32bit);
2023-08-16T21:08:46,755                        ~^~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,756   vendor/hmmer/src/p7_domain.c:385:30: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,756      ret_obj->domcorrection = *((float *) &host_32bit);
2023-08-16T21:08:46,757                                ~^~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,757   vendor/hmmer/src/p7_domain.c:391:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,758      ret_obj->dombias = *((float *) &host_32bit);
2023-08-16T21:08:46,759                          ~^~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,759   vendor/hmmer/src/p7_domain.c:397:21: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,760      ret_obj->oasc = *((float *) &host_32bit);
2023-08-16T21:08:46,760                       ~^~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,771   vendor/hmmer/src/p7_domain.c:403:25: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,772      ret_obj->bitscore = *((float *) &host_32bit);
2023-08-16T21:08:46,772                           ~^~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,773   vendor/hmmer/src/p7_domain.c:409:20: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,774      ret_obj->lnP = *((double *) &host_64bit);
2023-08-16T21:08:46,774                      ~^~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,775   vendor/hmmer/src/p7_domain.c:436:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,776          ret_obj->scores_per_pos[i] = *((float *) &host_32bit);
2023-08-16T21:08:46,777                                        ~^~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,777   vendor/hmmer/src/p7_domain.c:442:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:46,778      if(ptr - (buf + *n) != obj_size){
2023-08-16T21:08:46,779                          ^~
2023-08-16T21:08:46,883   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_alidisplay.o from vendor/hmmer/src/p7_alidisplay.c
2023-08-16T21:08:46,885   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_alidisplay.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_alidisplay.o
2023-08-16T21:08:46,990   vendor/hmmer/src/p7_hmmd_search_stats.c: In function ‘p7_hmmd_search_stats_Serialize’:
2023-08-16T21:08:46,992   vendor/hmmer/src/p7_hmmd_search_stats.c:89:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,993      network_64bit = esl_hton64(*((uint64_t *) &(obj->elapsed)));  // ow, this hurts, but is probably the best way to get the
2023-08-16T21:08:46,993                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,994   vendor/hmmer/src/p7_hmmd_search_stats.c:97:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,995      network_64bit = esl_hton64(*((uint64_t *) &(obj->user)));
2023-08-16T21:08:46,995                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,996   vendor/hmmer/src/p7_hmmd_search_stats.c:103:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,996      network_64bit = esl_hton64(*((uint64_t *) &(obj->sys)));
2023-08-16T21:08:46,996                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,997   vendor/hmmer/src/p7_hmmd_search_stats.c:109:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,997      network_64bit = esl_hton64(*((uint64_t *) &(obj->Z)));
2023-08-16T21:08:46,998                                  ~^~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:46,998   vendor/hmmer/src/p7_hmmd_search_stats.c:115:32: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:46,999      network_64bit = esl_hton64(*((uint64_t *) &(obj->domZ)));
2023-08-16T21:08:46,999                                  ~^~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:47,000   vendor/hmmer/src/p7_hmmd_search_stats.c:205:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘const long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:47,001        for (i = 0; i < obj->nhits; i++)
2023-08-16T21:08:47,001                      ^
2023-08-16T21:08:47,002   vendor/hmmer/src/p7_hmmd_search_stats.c: In function ‘p7_hmmd_search_stats_Deserialize’:
2023-08-16T21:08:47,002   vendor/hmmer/src/p7_hmmd_search_stats.c:258:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:47,003      ret_obj->elapsed = *((double *) &host_64bit);
2023-08-16T21:08:47,004                          ~^~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:47,004   vendor/hmmer/src/p7_hmmd_search_stats.c:264:21: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:47,005      ret_obj->user = *((double *) &host_64bit);
2023-08-16T21:08:47,005                       ~^~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:47,006   vendor/hmmer/src/p7_hmmd_search_stats.c:270:20: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:47,006      ret_obj->sys = *((double *) &host_64bit);
2023-08-16T21:08:47,007                      ~^~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:47,007   vendor/hmmer/src/p7_hmmd_search_stats.c:276:18: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:47,008      ret_obj->Z = *((double *) &host_64bit);
2023-08-16T21:08:47,008                    ~^~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:47,009   vendor/hmmer/src/p7_hmmd_search_stats.c:282:21: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
2023-08-16T21:08:47,009      ret_obj->domZ = *((double *) &host_64bit);
2023-08-16T21:08:47,010                       ~^~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:47,010   vendor/hmmer/src/p7_hmmd_search_stats.c:380:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:47,011        for (i = 1; i < ret_obj->nhits; i++)
2023-08-16T21:08:47,011                      ^
2023-08-16T21:08:47,829   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_domaindef.o from vendor/hmmer/src/p7_domaindef.c
2023-08-16T21:08:47,830   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_domaindef.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_domaindef.o
2023-08-16T21:08:47,846   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmwindow.o from vendor/hmmer/src/p7_hmmwindow.c
2023-08-16T21:08:47,848   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_hmmwindow.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmwindow.o
2023-08-16T21:08:48,144   vendor/hmmer/src/p7_alidisplay.c: In function ‘p7_alidisplay_Deserialize’:
2023-08-16T21:08:48,145   vendor/hmmer/src/p7_alidisplay.c:725:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:48,145      if(ret_obj->memsize < (obj_size - SER_BASE_SIZE)){  // ret_obj doesn't have enough space for this P7_ALIDISPLAY
2023-08-16T21:08:48,146                          ^
2023-08-16T21:08:48,154   vendor/hmmer/src/p7_alidisplay.c:885:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:48,154      if(mem_ptr - ret_obj->mem != (obj_size - SER_BASE_SIZE)){
2023-08-16T21:08:48,155                                ^~
2023-08-16T21:08:48,311   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmm.o from vendor/hmmer/src/p7_hmm.c
2023-08-16T21:08:48,313   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_hmm.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmm.o
2023-08-16T21:08:49,267   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_pipeline.o from vendor/hmmer/src/p7_pipeline.c
2023-08-16T21:08:49,269   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_pipeline.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_pipeline.o
2023-08-16T21:08:49,478   vendor/hmmer/src/p7_domaindef.c: In function ‘rescore_isolated_domain.isra.0’:
2023-08-16T21:08:49,478   vendor/hmmer/src/p7_domaindef.c:932:5: warning: ‘orig_L’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:08:49,479        p7_oprofile_ReconfigRestLength(om, orig_L);
2023-08-16T21:08:49,479        ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:08:49,540   vendor/hmmer/src/p7_hmm.c: In function ‘p7_hmm_Validate’:
2023-08-16T21:08:49,541   vendor/hmmer/src/p7_hmm.c:1282:85: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:49,541      if (hmm->flags & p7H_RF)   { if (hmm->rf == NULL        || strlen(hmm->rf)        != hmm->M+1) ESL_XFAIL(eslFAIL, errbuf, "p7H_RF flag up, but rf string is invalid");            }
2023-08-16T21:08:49,542                                                                                        ^~
2023-08-16T21:08:49,543   vendor/hmmer/src/p7_hmm.c:1285:86: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:49,543      if (hmm->flags & p7H_MMASK) { if (hmm->mm == NULL        || strlen(hmm->mm)        != hmm->M+1) ESL_XFAIL(eslFAIL, errbuf, "p7H_MMASK flag up, but mm string is invalid");            }
2023-08-16T21:08:49,544                                                                                         ^~
2023-08-16T21:08:49,544   vendor/hmmer/src/p7_hmm.c:1288:85: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:49,545      if (hmm->flags & p7H_CONS) { if (hmm->consensus == NULL || strlen(hmm->consensus) != hmm->M+1) ESL_XFAIL(eslFAIL, errbuf, "p7H_CONS flag up, but consensus string is invalid");   }
2023-08-16T21:08:49,545                                                                                        ^~
2023-08-16T21:08:49,546   vendor/hmmer/src/p7_hmm.c:1291:85: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:49,546      if (hmm->flags & p7H_CS)   { if (hmm->cs == NULL        || strlen(hmm->cs)        != hmm->M+1) ESL_XFAIL(eslFAIL, errbuf, "p7H_CS flag up, but cs string is invalid");   }
2023-08-16T21:08:49,547                                                                                        ^~
2023-08-16T21:08:49,561   vendor/hmmer/src/p7_hmm.c:1294:85: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:49,562      if (hmm->flags & p7H_CA)   { if (hmm->ca == NULL        || strlen(hmm->ca)        != hmm->M+1) ESL_XFAIL(eslFAIL, errbuf, "p7H_CA flag up, but ca string is invalid");   }
2023-08-16T21:08:49,563                                                                                        ^~
2023-08-16T21:08:50,515   In file included from vendor/hmmer/src/p7_pipeline.c:15:
2023-08-16T21:08:50,515   vendor/hmmer/src/p7_pipeline.c: In function ‘p7_pli_postSSV_LongTarget’:
2023-08-16T21:08:50,516   vendor/easel/easel.h:431:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:50,517    #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-08-16T21:08:50,517                                       ^
2023-08-16T21:08:50,518   vendor/hmmer/src/p7_pipeline.c:1407:61: note: in expansion of macro ‘ESL_MIN’
2023-08-16T21:08:50,518               p7_hmmwindow_new(vit_windowlist, 0, new_n, 0, 0, ESL_MIN(max_window_len,new_len), 0.0, p7_NOCOMPLEMENT, new_len );
2023-08-16T21:08:50,519                                                                ^~~~~~~
2023-08-16T21:08:50,519   vendor/easel/easel.h:431:42: warning: operand of ?: changes signedness from ‘int’ to ‘uint32_t’ {aka ‘unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-08-16T21:08:50,520    #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-08-16T21:08:50,521                                             ^~~
2023-08-16T21:08:50,521   vendor/hmmer/src/p7_pipeline.c:1407:61: note: in expansion of macro ‘ESL_MIN’
2023-08-16T21:08:50,522               p7_hmmwindow_new(vit_windowlist, 0, new_n, 0, 0, ESL_MIN(max_window_len,new_len), 0.0, p7_NOCOMPLEMENT, new_len );
2023-08-16T21:08:50,522                                                                ^~~~~~~
2023-08-16T21:08:50,523   vendor/hmmer/src/p7_pipeline.c:1408:27: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:50,524             } while (new_len > max_window_len);
2023-08-16T21:08:50,524                              ^
2023-08-16T21:08:50,534   vendor/hmmer/src/p7_pipeline.c: In function ‘p7_Pipeline_LongTarget’:
2023-08-16T21:08:50,534   vendor/hmmer/src/p7_pipeline.c:1655:46: warning: operand of ?: changes signedness from ‘int64_t’ {aka ‘const long long int’} to ‘uint64_t’ {aka ‘long long unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-08-16T21:08:50,535                (fmf != NULL ? seq_start       : sq->start),
2023-08-16T21:08:50,535                                                 ^~~~~~~~~
2023-08-16T21:08:50,536   vendor/hmmer/src/p7_pipeline.c:1660:46: warning: operand of ?: changes signedness from ‘int’ to ‘uint32_t’ {aka ‘unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-08-16T21:08:50,536                (fmf != NULL ? seq_data.length : -1),
2023-08-16T21:08:50,537                                                 ^~
2023-08-16T21:08:51,171   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gbands.o from vendor/hmmer/src/p7_gbands.c
2023-08-16T21:08:51,171   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_gbands.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gbands.o
2023-08-16T21:08:52,103   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmx.o from vendor/hmmer/src/p7_gmx.c
2023-08-16T21:08:52,106   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_gmx.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmx.o
2023-08-16T21:08:52,751   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmcache.o from vendor/hmmer/src/p7_hmmcache.c
2023-08-16T21:08:52,753   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_hmmcache.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmcache.o
2023-08-16T21:08:53,337   In file included from vendor/hmmer/src/hmmer.h:42,
2023-08-16T21:08:53,338                    from vendor/hmmer/src/p7_gmx.c:11:
2023-08-16T21:08:53,338   vendor/hmmer/src/p7_gmx.c: In function ‘p7_gmx_GrowTo’:
2023-08-16T21:08:53,340   vendor/easel/easel.h:431:36: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:53,341    #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-08-16T21:08:53,341                                       ^
2023-08-16T21:08:53,342   vendor/hmmer/src/p7_gmx.c:144:20: note: in expansion of macro ‘ESL_MIN’
2023-08-16T21:08:53,342          gx->validR = ESL_MIN(gx->ncells / gx->allocW, gx->allocR);
2023-08-16T21:08:53,343                       ^~~~~~~
2023-08-16T21:08:53,344   vendor/easel/easel.h:431:46: warning: operand of ?: changes signedness from ‘int’ to ‘uint64_t’ {aka ‘long long unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-08-16T21:08:53,345    #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-08-16T21:08:53,345                                                 ^~~
2023-08-16T21:08:53,346   vendor/hmmer/src/p7_gmx.c:144:20: note: in expansion of macro ‘ESL_MIN’
2023-08-16T21:08:53,346          gx->validR = ESL_MIN(gx->ncells / gx->allocW, gx->allocR);
2023-08-16T21:08:53,347                       ^~~~~~~
2023-08-16T21:08:53,781   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_bg.o from vendor/hmmer/src/p7_bg.c
2023-08-16T21:08:53,781   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_bg.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_bg.o
2023-08-16T21:08:54,016   vendor/hmmer/src/p7_hmmcache.c: In function ‘p7_hmmcache_Sizeof’:
2023-08-16T21:08:54,017   vendor/hmmer/src/p7_hmmcache.c:111:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:54,018      for (i = 0; i < cache->n; i++)
2023-08-16T21:08:54,018                    ^
2023-08-16T21:08:54,020   vendor/hmmer/src/p7_hmmcache.c: In function ‘p7_hmmcache_SetNumericNames’:
2023-08-16T21:08:54,021   vendor/hmmer/src/p7_hmmcache.c:139:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:54,021      for (i = 0; i < cache->n; i++)
2023-08-16T21:08:54,022                    ^
2023-08-16T21:08:54,024   vendor/hmmer/src/p7_hmmcache.c: In function ‘p7_hmmcache_Close’:
2023-08-16T21:08:54,025   vendor/hmmer/src/p7_hmmcache.c:162:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:54,026          for (i = 0; i < cache->n; i++)
2023-08-16T21:08:54,027                        ^
2023-08-16T21:08:54,484   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_spensemble.o from vendor/hmmer/src/p7_spensemble.c
2023-08-16T21:08:54,485   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_spensemble.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_spensemble.o
2023-08-16T21:08:54,591   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_alphabet.o from vendor/hmmer/src/fm_alphabet.c
2023-08-16T21:08:54,592   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/fm_alphabet.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_alphabet.o
2023-08-16T21:08:55,751   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_prior.o from vendor/hmmer/src/p7_prior.c
2023-08-16T21:08:55,751   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_prior.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_prior.o
2023-08-16T21:08:56,092   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/decoding.o from vendor/hmmer/src/impl_neon/decoding.c
2023-08-16T21:08:56,094   creating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon
2023-08-16T21:08:56,096   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/decoding.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/decoding.o
2023-08-16T21:08:56,211   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_general.o from vendor/hmmer/src/fm_general.c
2023-08-16T21:08:56,212   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/fm_general.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_general.o
2023-08-16T21:08:56,305   vendor/hmmer/src/p7_spensemble.c: In function ‘p7_spensemble_Cluster’:
2023-08-16T21:08:56,305   vendor/hmmer/src/p7_spensemble.c:294:25: warning: ‘mmax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:08:56,306      int imax, jmax, kmax, mmax;
2023-08-16T21:08:56,306                            ^~~~
2023-08-16T21:08:56,307   vendor/hmmer/src/p7_spensemble.c:363:7: warning: ‘kmax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:08:56,307          for (best_k = kmin; best_k <= kmax; best_k++) if (sp->epc[best_k-kmin] >= epc_threshold) break;
2023-08-16T21:08:56,308          ^~~
2023-08-16T21:08:56,308   vendor/hmmer/src/p7_spensemble.c:294:13: warning: ‘jmax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:08:56,309      int imax, jmax, kmax, mmax;
2023-08-16T21:08:56,309                ^~~~
2023-08-16T21:08:56,310   vendor/hmmer/src/p7_spensemble.c:357:7: warning: ‘imax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:08:56,310          for (best_i = imin; best_i <= imax; best_i++) if (sp->epc[best_i-imin] >= epc_threshold) break;
2023-08-16T21:08:56,310          ^~~
2023-08-16T21:08:56,311   vendor/hmmer/src/p7_spensemble.c:293:25: warning: ‘mmin’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:08:56,312      int imin, jmin, kmin, mmin;
2023-08-16T21:08:56,312                            ^~~~
2023-08-16T21:08:56,313   vendor/hmmer/src/p7_spensemble.c:362:82: warning: ‘kmin’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:08:56,313          for (h = 0; h < sp->n; h++) if (sp->assignment[h] == c) sp->epc[sp->sp[h].k-kmin]++;
2023-08-16T21:08:56,314                                                                          ~~~~~~~~~~~^~~~~
2023-08-16T21:08:56,314   vendor/hmmer/src/p7_spensemble.c:293:13: warning: ‘jmin’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:08:56,315      int imin, jmin, kmin, mmin;
2023-08-16T21:08:56,315                ^~~~
2023-08-16T21:08:57,122   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_tophits.o from vendor/hmmer/src/p7_tophits.c
2023-08-16T21:08:57,124   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_tophits.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_tophits.o
2023-08-16T21:08:57,383   vendor/hmmer/src/fm_general.c: In function ‘fm_findOverlappingAmbiguityBlock’:
2023-08-16T21:08:57,384   vendor/hmmer/src/fm_general.c:292:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:57,384      if (ranges[lo].lower > end)     return -1;
2023-08-16T21:08:57,385                           ^
2023-08-16T21:08:57,385   vendor/hmmer/src/fm_general.c:293:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:57,386      if (ranges[hi].upper < start)   return -1;
2023-08-16T21:08:57,386                           ^
2023-08-16T21:08:57,387   vendor/hmmer/src/fm_general.c:297:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:57,387        if      (ranges[mid].lower   < start)  lo = mid + 1; // too far left
2023-08-16T21:08:57,388                                     ^
2023-08-16T21:08:57,388   vendor/hmmer/src/fm_general.c:302:42: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:57,389      if      (lo>0 &&  ranges[lo-1].upper   >= start && ranges[lo-1].lower <= end) return lo-1;
2023-08-16T21:08:57,389                                             ^~
2023-08-16T21:08:57,390   vendor/hmmer/src/fm_general.c:302:73: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:57,390      if      (lo>0 &&  ranges[lo-1].upper   >= start && ranges[lo-1].lower <= end) return lo-1;
2023-08-16T21:08:57,391                                                                            ^~
2023-08-16T21:08:57,391   vendor/hmmer/src/fm_general.c:303:42: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:57,392      else if (         ranges[lo].upper     >= start && ranges[lo].lower   <= end) return lo;
2023-08-16T21:08:57,392                                             ^~
2023-08-16T21:08:57,393   vendor/hmmer/src/fm_general.c:303:73: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:57,393      else if (         ranges[lo].upper     >= start && ranges[lo].lower   <= end) return lo;
2023-08-16T21:08:57,394                                                                            ^~
2023-08-16T21:08:57,394   vendor/hmmer/src/fm_general.c: In function ‘fm_convertRange2DSQ’:
2023-08-16T21:08:57,395   vendor/hmmer/src/fm_general.c:350:20: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘unsigned int’ [-Wsign-compare]
2023-08-16T21:08:57,395            while (pos <= fm->ambig_offset + fm->ambig_cnt -1 && meta->ambig_list->ranges[pos].lower <= first+length-1) {
2023-08-16T21:08:57,396                       ^~
2023-08-16T21:08:57,396   vendor/hmmer/src/fm_general.c:350:98: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:57,397            while (pos <= fm->ambig_offset + fm->ambig_cnt -1 && meta->ambig_list->ranges[pos].lower <= first+length-1) {
2023-08-16T21:08:57,397                                                                                                     ^~
2023-08-16T21:08:57,398   In file included from vendor/hmmer/src/fm_general.c:12:
2023-08-16T21:08:57,398   vendor/easel/easel.h:432:36: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:57,399    #define ESL_MAX(a,b)          (((a)>(b))?(a):(b))
2023-08-16T21:08:57,399                                       ^
2023-08-16T21:08:57,400   vendor/hmmer/src/fm_general.c:351:23: note: in expansion of macro ‘ESL_MAX’
2023-08-16T21:08:57,400              int start = ESL_MAX(first,          meta->ambig_list->ranges[pos].lower);
2023-08-16T21:08:57,411                          ^~~~~~~
2023-08-16T21:08:57,412   vendor/easel/easel.h:432:46: warning: operand of ?: changes signedness from ‘int’ to ‘uint64_t’ {aka ‘long long unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-08-16T21:08:57,412    #define ESL_MAX(a,b)          (((a)>(b))?(a):(b))
2023-08-16T21:08:57,413                                                 ^~~
2023-08-16T21:08:57,413   vendor/hmmer/src/fm_general.c:351:23: note: in expansion of macro ‘ESL_MAX’
2023-08-16T21:08:57,414              int start = ESL_MAX(first,          meta->ambig_list->ranges[pos].lower);
2023-08-16T21:08:57,414                          ^~~~~~~
2023-08-16T21:08:57,415   vendor/easel/easel.h:431:36: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:57,415    #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-08-16T21:08:57,416                                       ^
2023-08-16T21:08:57,416   vendor/hmmer/src/fm_general.c:352:23: note: in expansion of macro ‘ESL_MIN’
2023-08-16T21:08:57,417              int end =   ESL_MIN(first+length-1, meta->ambig_list->ranges[pos].upper);
2023-08-16T21:08:57,417                          ^~~~~~~
2023-08-16T21:08:57,418   vendor/easel/easel.h:431:46: warning: operand of ?: changes signedness from ‘int’ to ‘uint64_t’ {aka ‘long long unsigned int’} due to unsignedness of other operand [-Wsign-compare]
2023-08-16T21:08:57,418    #define ESL_MIN(a,b)          (((a)<(b))?(a):(b))
2023-08-16T21:08:57,419                                                 ^~~
2023-08-16T21:08:57,419   vendor/hmmer/src/fm_general.c:352:23: note: in expansion of macro ‘ESL_MIN’
2023-08-16T21:08:57,420              int end =   ESL_MIN(first+length-1, meta->ambig_list->ranges[pos].upper);
2023-08-16T21:08:57,420                          ^~~~~~~
2023-08-16T21:08:57,431   vendor/hmmer/src/fm_general.c:353:27: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:57,432              for (j= start; j<=end; j++)
2023-08-16T21:08:57,433                              ^~
2023-08-16T21:08:57,435   vendor/hmmer/src/fm_general.c: In function ‘fm_FM_read’:
2023-08-16T21:08:57,436   vendor/hmmer/src/fm_general.c:537:75: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int32_t’ {aka ‘int’} [-Wsign-compare]
2023-08-16T21:08:57,436         (getAll && fread(fm->T, sizeof(uint8_t), compressed_bytes, meta->fp) != compressed_bytes) ||
2023-08-16T21:08:57,437                                                                              ^~
2023-08-16T21:08:57,438   vendor/hmmer/src/fm_general.c:538:68: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int32_t’ {aka ‘int’} [-Wsign-compare]
2023-08-16T21:08:57,438         (fread(fm->BWT, sizeof(uint8_t), compressed_bytes, meta->fp)  != compressed_bytes) ||
2023-08-16T21:08:57,439                                                                       ^~
2023-08-16T21:08:57,440   vendor/hmmer/src/fm_general.c: In function ‘fm_readFMmeta’:
2023-08-16T21:08:57,440   vendor/hmmer/src/fm_general.c:620:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:57,451      for (i=0; i<meta->seq_count; i++) {
2023-08-16T21:08:57,452                 ^
2023-08-16T21:08:57,452   vendor/hmmer/src/fm_general.c:638:101: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:57,453            fread(meta->seq_data[i].name,   sizeof(char), meta->seq_data[i].name_length+1   , meta->fp) !=  meta->seq_data[i].name_length+1  ||
2023-08-16T21:08:57,453                                                                                                        ^~
2023-08-16T21:08:57,454   vendor/hmmer/src/fm_general.c:639:101: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:57,454            fread(meta->seq_data[i].acc,    sizeof(char), meta->seq_data[i].acc_length+1    , meta->fp) !=  meta->seq_data[i].acc_length+1  ||
2023-08-16T21:08:57,455                                                                                                        ^~
2023-08-16T21:08:57,455   vendor/hmmer/src/fm_general.c:640:101: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:57,456            fread(meta->seq_data[i].source, sizeof(char), meta->seq_data[i].source_length+1 , meta->fp) !=  meta->seq_data[i].source_length+1  ||
2023-08-16T21:08:57,456                                                                                                        ^~
2023-08-16T21:08:57,456   vendor/hmmer/src/fm_general.c:641:101: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:08:57,457            fread(meta->seq_data[i].desc,   sizeof(char), meta->seq_data[i].desc_length+1   , meta->fp) !=  meta->seq_data[i].desc_length+1
2023-08-16T21:08:57,457                                                                                                        ^~
2023-08-16T21:08:57,458   vendor/hmmer/src/fm_general.c:651:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:57,458      for (i=0; i<meta->ambig_list->count; i++) {
2023-08-16T21:08:57,459                 ^
2023-08-16T21:08:57,459   vendor/hmmer/src/fm_general.c:663:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:57,460        for (i=0; i<meta->seq_count; i++)
2023-08-16T21:08:57,460                   ^
2023-08-16T21:08:57,473   vendor/hmmer/src/fm_general.c: In function ‘fm_metaDestroy’:
2023-08-16T21:08:57,474   vendor/hmmer/src/fm_general.c:727:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:08:57,475        for (i=0; i<meta->seq_count; i++) {
2023-08-16T21:08:57,475                   ^
2023-08-16T21:08:57,761   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_profile.o from vendor/hmmer/src/p7_profile.c
2023-08-16T21:08:57,761   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_profile.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_profile.o
2023-08-16T21:08:57,787   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/vitfilter.o from vendor/hmmer/src/impl_neon/vitfilter.c
2023-08-16T21:08:57,790   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/vitfilter.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/vitfilter.o
2023-08-16T21:08:58,314   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Clone’:
2023-08-16T21:08:58,316   vendor/hmmer/src/p7_tophits.c:92:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,317      for (i = 0; i < h2->N; i++) {
2023-08-16T21:08:58,318                    ^
2023-08-16T21:08:58,318   vendor/hmmer/src/p7_tophits.c:100:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,319      for (i = 0; i < h2->N; i++) {
2023-08-16T21:08:58,319                    ^
2023-08-16T21:08:58,320   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Grow’:
2023-08-16T21:08:58,321   vendor/hmmer/src/p7_tophits.c:143:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,321          for (i = 0; i < h->N; i++)
2023-08-16T21:08:58,322                        ^
2023-08-16T21:08:58,329   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_SortBySortkey’:
2023-08-16T21:08:58,330   vendor/hmmer/src/p7_tophits.c:398:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,330      for (i = 0; i < h->N; i++) h->hit[i] = h->unsrt + i;
2023-08-16T21:08:58,331                    ^
2023-08-16T21:08:58,331   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_SortBySeqidxAndAlipos’:
2023-08-16T21:08:58,332   vendor/hmmer/src/p7_tophits.c:431:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,332      for (i = 0; i < h->N; i++) h->hit[i] = h->unsrt + i;
2023-08-16T21:08:58,333                    ^
2023-08-16T21:08:58,333   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_SortByModelnameAndAlipos’:
2023-08-16T21:08:58,334   vendor/hmmer/src/p7_tophits.c:452:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,334      for (i = 0; i < h->N; i++) h->hit[i] = h->unsrt + i;
2023-08-16T21:08:58,335                    ^
2023-08-16T21:08:58,335   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Merge’:
2023-08-16T21:08:58,336   vendor/hmmer/src/p7_tophits.c:496:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,336      for (i = 0; i < h1->N; i++)
2023-08-16T21:08:58,337                    ^
2023-08-16T21:08:58,338   vendor/hmmer/src/p7_tophits.c:504:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,338      for (i=0,j=0,k=0; i < h1->N && j < h2->N ; k++)
2023-08-16T21:08:58,339                          ^
2023-08-16T21:08:58,339   vendor/hmmer/src/p7_tophits.c:504:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,339      for (i=0,j=0,k=0; i < h1->N && j < h2->N ; k++)
2023-08-16T21:08:58,340                                       ^
2023-08-16T21:08:58,350   vendor/hmmer/src/p7_tophits.c:506:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,351      while (i < h1->N) new_hit[k++] = h1->hit[i++];
2023-08-16T21:08:58,351               ^
2023-08-16T21:08:58,352   vendor/hmmer/src/p7_tophits.c:507:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,352      while (j < h2->N) new_hit[k++] = new2 + (h2->hit[j++] - h2->unsrt);
2023-08-16T21:08:58,353               ^
2023-08-16T21:08:58,353   vendor/hmmer/src/p7_tophits.c:511:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,354      for (i = 0; i < h2->N; i++)
2023-08-16T21:08:58,354                    ^
2023-08-16T21:08:58,355   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_GetMaxPositionLength’:
2023-08-16T21:08:58,355   vendor/hmmer/src/p7_tophits.c:559:17: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,356      for (i = 0; i < h->N; i++) {
2023-08-16T21:08:58,357                    ^
2023-08-16T21:08:58,357   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_GetMaxNameLength’:
2023-08-16T21:08:58,358   vendor/hmmer/src/p7_tophits.c:589:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,358      for (max = 0, i = 0; i < h->N; i++)
2023-08-16T21:08:58,359                             ^
2023-08-16T21:08:58,359   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_GetMaxAccessionLength’:
2023-08-16T21:08:58,360   vendor/hmmer/src/p7_tophits.c:608:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,360      for (max = 0, i = 0; i < h->N; i++)
2023-08-16T21:08:58,371                             ^
2023-08-16T21:08:58,371   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_GetMaxShownLength’:
2023-08-16T21:08:58,372   vendor/hmmer/src/p7_tophits.c:630:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,373      for (max = 0, i = 0; i < h->N; i++)
2023-08-16T21:08:58,373                             ^
2023-08-16T21:08:58,373   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Reuse’:
2023-08-16T21:08:58,374   vendor/hmmer/src/p7_tophits.c:663:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,374        for (i = 0; i < h->N; i++)
2023-08-16T21:08:58,375                      ^
2023-08-16T21:08:58,375   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Destroy’:
2023-08-16T21:08:58,376   vendor/hmmer/src/p7_tophits.c:693:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,376        for (i = 0; i < h->N; i++)
2023-08-16T21:08:58,377                      ^
2023-08-16T21:08:58,391   vendor/hmmer/src/p7_tophits.c: In function ‘workaround_bug_h74’:
2023-08-16T21:08:58,391   vendor/hmmer/src/p7_tophits.c:762:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,392      for (h = 0; h < th->N; h++)
2023-08-16T21:08:58,392                    ^
2023-08-16T21:08:58,393   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_ComputeNhmmerEvalues’:
2023-08-16T21:08:58,393   vendor/hmmer/src/p7_tophits.c:800:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,394      for (i = 0; i < th->N ; i++)
2023-08-16T21:08:58,395                    ^
2023-08-16T21:08:58,395   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_RemoveDuplicates’:
2023-08-16T21:08:58,395   vendor/hmmer/src/p7_tophits.c:836:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,396      for (i = 1; i < th->N; i++)
2023-08-16T21:08:58,397                    ^
2023-08-16T21:08:58,397   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Threshold’:
2023-08-16T21:08:58,398   vendor/hmmer/src/p7_tophits.c:935:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,398        for (h = 0; h < th->N; h++)
2023-08-16T21:08:58,399                      ^
2023-08-16T21:08:58,399   vendor/hmmer/src/p7_tophits.c:956:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,400      for (h = 0; h < th->N; h++)
2023-08-16T21:08:58,400                    ^
2023-08-16T21:08:58,400   vendor/hmmer/src/p7_tophits.c:974:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,401        for (h = 0; h < th->N; h++)
2023-08-16T21:08:58,401                      ^
2023-08-16T21:08:58,402   vendor/hmmer/src/p7_tophits.c:991:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,402      for (h = 0; h < th->N; h++) {
2023-08-16T21:08:58,403                    ^
2023-08-16T21:08:58,403   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_CompareRanking’:
2023-08-16T21:08:58,404   vendor/hmmer/src/p7_tophits.c:1069:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,404      for (h = 0; h < th->N; h++)
2023-08-16T21:08:58,405                    ^
2023-08-16T21:08:58,405   vendor/hmmer/src/p7_tophits.c:1085:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,406      for (h = 0; h < th->N; h++)
2023-08-16T21:08:58,406                    ^
2023-08-16T21:08:58,407   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Targets’:
2023-08-16T21:08:58,407   vendor/hmmer/src/p7_tophits.c:1173:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,408      for (h = 0; h < th->N; h++)
2023-08-16T21:08:58,408                    ^
2023-08-16T21:08:58,409   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Domains’:
2023-08-16T21:08:58,418   vendor/hmmer/src/p7_tophits.c:1289:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,418      for (h = 0; h < th->N; h++)
2023-08-16T21:08:58,418                    ^
2023-08-16T21:08:58,419   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Alignment’:
2023-08-16T21:08:58,419   vendor/hmmer/src/p7_tophits.c:1528:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘const long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,420      for (h = 0; h < th->N; h++)
2023-08-16T21:08:58,420                    ^
2023-08-16T21:08:58,421   vendor/hmmer/src/p7_tophits.c:1554:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘const long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,421      for (h = 0; h < th->N; h++)
2023-08-16T21:08:58,422                    ^
2023-08-16T21:08:58,435   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_TabularTargets’:
2023-08-16T21:08:58,435   vendor/hmmer/src/p7_tophits.c:1643:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,436      for (h = 0; h < th->N; h++)
2023-08-16T21:08:58,437                    ^
2023-08-16T21:08:58,445   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_TabularDomains’:
2023-08-16T21:08:58,446   vendor/hmmer/src/p7_tophits.c:1736:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,447      for (h = 0; h < th->N; h++)
2023-08-16T21:08:58,447                    ^
2023-08-16T21:08:58,455   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_TabularXfam’:
2023-08-16T21:08:58,455   vendor/hmmer/src/p7_tophits.c:1838:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,456        for (h = 0; h < th->N; h++)
2023-08-16T21:08:58,457                      ^
2023-08-16T21:08:58,461   vendor/hmmer/src/p7_tophits.c:1872:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,461          for (h = 0; h < th->N; h++)
2023-08-16T21:08:58,462                        ^
2023-08-16T21:08:58,464   vendor/hmmer/src/p7_tophits.c:1893:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,465          for (h = 0; h < th->N; h++)
2023-08-16T21:08:58,465                        ^
2023-08-16T21:08:58,468   vendor/hmmer/src/p7_tophits.c:1927:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,469          for (h = 0; h < domHitlist->N; h++)
2023-08-16T21:08:58,469                        ^
2023-08-16T21:08:58,470   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_AliScores’:
2023-08-16T21:08:58,471   vendor/hmmer/src/p7_tophits.c:1980:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:08:58,472      for (h = 0; h < th->N; h++) {
2023-08-16T21:08:58,472                    ^
2023-08-16T21:08:59,584   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_sse.o from vendor/hmmer/src/fm_sse.c
2023-08-16T21:08:59,586   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/fm_sse.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_sse.o
2023-08-16T21:09:00,220   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/mpi.o from vendor/hmmer/src/impl_neon/mpi.c
2023-08-16T21:09:00,231   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/mpi.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/mpi.o
2023-08-16T21:09:00,389   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/msvfilter.o from vendor/hmmer/src/impl_neon/msvfilter.c
2023-08-16T21:09:00,393   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/msvfilter.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/msvfilter.o
2023-08-16T21:09:00,473   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/fwdback.o from vendor/hmmer/src/impl_neon/fwdback.c
2023-08-16T21:09:00,476   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/fwdback.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/fwdback.o
2023-08-16T21:09:00,731   vendor/hmmer/src/fm_sse.c: In function ‘fm_getOccCount’:
2023-08-16T21:09:00,733   vendor/hmmer/src/fm_sse.c:201:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘const long long unsigned int’} [-Wsign-compare]
2023-08-16T21:09:00,733      if (landmark >= fm->N) { // special case: for a count in the final block, just count from the bottom
2023-08-16T21:09:00,734                   ^~
2023-08-16T21:09:00,734   vendor/hmmer/src/fm_sse.c: In function ‘fm_getOccCountLT’:
2023-08-16T21:09:00,735   vendor/hmmer/src/fm_sse.c:389:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘const long long unsigned int’} [-Wsign-compare]
2023-08-16T21:09:00,736      if (landmark >= fm->N) { // special case: for a count in the final block, just count from the bottom
2023-08-16T21:09:00,736                   ^~
2023-08-16T21:09:00,737   vendor/hmmer/src/fm_sse.c:404:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:09:00,737      } else if ( b_pos !=  sb_pos * (meta->freq_cnt_sb / meta->freq_cnt_b))  {
2023-08-16T21:09:00,739                        ^~
2023-08-16T21:09:01,073   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_ssv.o from vendor/hmmer/src/fm_ssv.c
2023-08-16T21:09:01,075   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/fm_ssv.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_ssv.o
2023-08-16T21:09:01,621   vendor/hmmer/src/p7_tophits.c: In function ‘p7_tophits_Targets’:
2023-08-16T21:09:01,622   vendor/hmmer/src/p7_tophits.c:1200:12: warning: ‘posw’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:09:01,623           if (fprintf(ofp, "%c %9.2g %6.1f %5.1f  %-*s %*" PRId64 " %*" PRId64 "",
2023-08-16T21:09:01,623               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:09:01,624         newness,
2023-08-16T21:09:01,624         ~~~~~~~~
2023-08-16T21:09:01,625         exp(th->hit[h]->lnP), // * pli->Z,
2023-08-16T21:09:01,625         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:09:01,626         th->hit[h]->score,
2023-08-16T21:09:01,626         ~~~~~~~~~~~~~~~~~~
2023-08-16T21:09:01,627         eslCONST_LOG2R * th->hit[h]->dcl[d].dombias, // an nhmmer hit is really a domain, so this is the hit's bias correction
2023-08-16T21:09:01,628         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:09:01,628         namew, showname,
2023-08-16T21:09:01,629         ~~~~~~~~~~~~~~~~
2023-08-16T21:09:01,629         posw, th->hit[h]->dcl[d].iali,
2023-08-16T21:09:01,630         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:09:01,630         posw, th->hit[h]->dcl[d].jali) < 0)
2023-08-16T21:09:01,641         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-16T21:09:02,213   vendor/hmmer/src/fm_ssv.c: In function ‘FM_mergeSeeds’:
2023-08-16T21:09:02,214   vendor/hmmer/src/fm_ssv.c:70:33: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:02,214              && ( next.n - next.k) == curr_diagval                 //overlapping diagonals will share the same value of (n - k)
2023-08-16T21:09:02,215                                    ^~
2023-08-16T21:09:02,216   vendor/hmmer/src/fm_ssv.c:71:35: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:02,217              && next.n + next.length < curr_n + curr_len + ssv_length       //overlapping, or close to it
2023-08-16T21:09:02,218                                      ^
2023-08-16T21:09:02,221   vendor/hmmer/src/fm_ssv.c: In function ‘FM_backtrackSeed’:
2023-08-16T21:09:02,222   vendor/hmmer/src/fm_ssv.c:134:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘const unsigned int’} [-Wsign-compare]
2023-08-16T21:09:02,222      while ( j != fmf->term_loc && (j % fm_cfg->meta->freq_SA)) { //go until we hit a position in the full SA that was sampled during FM index construction
2023-08-16T21:09:02,223                ^~
2023-08-16T21:09:02,225   vendor/hmmer/src/fm_ssv.c:141:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint32_t’ {aka ‘const unsigned int’} [-Wsign-compare]
2023-08-16T21:09:02,226      return len + (j==fmf->term_loc ? 0 : fmf->SA[ j / fm_cfg->meta->freq_SA ]) ; // len is how many backward steps we had to take to find a sampled SA position
2023-08-16T21:09:02,226                     ^~
2023-08-16T21:09:02,245   vendor/hmmer/src/fm_ssv.c: In function ‘FM_extendSeed’:
2023-08-16T21:09:02,246   vendor/hmmer/src/fm_ssv.c:664:18: warning: comparison of integer expressions of different signedness: ‘int64_t’ {aka ‘long long int’} and ‘long long unsigned int’ [-Wsign-compare]
2023-08-16T21:09:02,247      if (target_end > fm->N-2) {
2023-08-16T21:09:02,248                     ^
2023-08-16T21:09:02,249   vendor/hmmer/src/fm_ssv.c:678:14: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int32_t’ {aka ‘int’} [-Wsign-compare]
2023-08-16T21:09:02,250      for (  ; k <= model_end; k++, n++) {
2023-08-16T21:09:02,251                 ^~
2023-08-16T21:09:02,541   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/stotrace.o from vendor/hmmer/src/impl_neon/stotrace.c
2023-08-16T21:09:02,541   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/stotrace.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/stotrace.o
2023-08-16T21:09:03,469   vendor/hmmer/src/fm_ssv.c: In function ‘p7_SSVFM_longlarget’:
2023-08-16T21:09:03,470   vendor/hmmer/src/fm_ssv.c:696:31: warning: ‘max_hit_end’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:09:03,470      diag->length  = max_hit_end - max_hit_start + 1;
2023-08-16T21:09:03,471                      ~~~~~~~~~~~~^~~~~~~~~~~~~~~
2023-08-16T21:09:03,471   vendor/hmmer/src/fm_ssv.c:647:37: note: ‘max_hit_end’ was declared here
2023-08-16T21:09:03,472      int64_t hit_start, max_hit_start, max_hit_end;
2023-08-16T21:09:03,472                                        ^~~~~~~~~~~
2023-08-16T21:09:03,473   vendor/hmmer/src/fm_ssv.c:695:32: warning: ‘max_hit_start’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:09:03,473      diag->k       = model_start  + max_hit_start - 1;
2023-08-16T21:09:03,474                      ~~~~~~~~~~~~~^~~~~~~~~~~~~~~
2023-08-16T21:09:03,474   vendor/hmmer/src/fm_ssv.c:647:22: note: ‘max_hit_start’ was declared here
2023-08-16T21:09:03,475      int64_t hit_start, max_hit_start, max_hit_end;
2023-08-16T21:09:03,475                         ^~~~~~~~~~~~~
2023-08-16T21:09:03,579   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/ssvfilter.o from vendor/hmmer/src/impl_neon/ssvfilter.c
2023-08-16T21:09:03,581   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/ssvfilter.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/ssvfilter.o
2023-08-16T21:09:04,397   generating build/temp.linux-armv7l-cpython-37/build/temp.linux-armv7l-cpython-37/p7_hmmfile.o from build/temp.linux-armv7l-cpython-37/p7_hmmfile.c
2023-08-16T21:09:04,399   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c build/temp.linux-armv7l-cpython-37/p7_hmmfile.c -o build/temp.linux-armv7l-cpython-37/build/temp.linux-armv7l-cpython-37/p7_hmmfile.o
2023-08-16T21:09:04,737   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/p7_oprofile.o from vendor/hmmer/src/impl_neon/p7_oprofile.c
2023-08-16T21:09:04,739   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/p7_oprofile.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/p7_oprofile.o
2023-08-16T21:09:05,390   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_trace.o from vendor/hmmer/src/p7_trace.c
2023-08-16T21:09:05,392   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_trace.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_trace.o
2023-08-16T21:09:05,691   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c: In function ‘p7_hmmfile_WriteBinary’:
2023-08-16T21:09:05,692   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1026:70: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:05,692        if (fwrite((char *) hmm->mat[k], sizeof(float), hmm->abc->K, fp) != hmm->abc->K) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-08-16T21:09:05,693                                                                         ^~
2023-08-16T21:09:05,694   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1028:70: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:05,694        if (fwrite((char *) hmm->ins[k], sizeof(float), hmm->abc->K, fp) != hmm->abc->K) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-08-16T21:09:05,695                                                                         ^~
2023-08-16T21:09:05,697   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1037:95: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:05,698      if ((hmm->flags & p7H_RF)   && (fwrite((char *) hmm->rf,        sizeof(char), hmm->M+2, fp) != hmm->M+2)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed"); /* +2: 1..M and trailing \0 */
2023-08-16T21:09:05,699                                                                                                  ^~
2023-08-16T21:09:05,699   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1038:95: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:05,700      if ((hmm->flags & p7H_MMASK)&& (fwrite((char *) hmm->mm,        sizeof(char), hmm->M+2, fp) != hmm->M+2)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed"); /* +2: 1..M and trailing \0 */
2023-08-16T21:09:05,700                                                                                                  ^~
2023-08-16T21:09:05,701   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1039:95: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:05,701      if ((hmm->flags & p7H_CONS) && (fwrite((char *) hmm->consensus, sizeof(char), hmm->M+2, fp) != hmm->M+2)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed"); /* don't need to test for >=3e format; p7H_CONS flag suffices (didn't exist pre-3e) */
2023-08-16T21:09:05,702                                                                                                  ^~
2023-08-16T21:09:05,703   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1040:95: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:05,703      if ((hmm->flags & p7H_CS)   && (fwrite((char *) hmm->cs,        sizeof(char), hmm->M+2, fp) != hmm->M+2)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-08-16T21:09:05,704                                                                                                  ^~
2023-08-16T21:09:05,704   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1041:95: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:05,705      if ((hmm->flags & p7H_CA)   && (fwrite((char *) hmm->ca,        sizeof(char), hmm->M+2, fp) != hmm->M+2)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-08-16T21:09:05,705                                                                                                  ^~
2023-08-16T21:09:05,706   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1047:95: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:05,706      if ((hmm->flags & p7H_MAP)  && (fwrite((char *) hmm->map,       sizeof(int),  hmm->M+1, fp) != hmm->M+1)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-08-16T21:09:05,707                                                                                                  ^~
2023-08-16T21:09:05,707   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1064:96: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:05,721      if ((hmm->flags & p7H_COMPO) && (fwrite((char *) hmm->compo, sizeof(float), hmm->abc->K, fp) != hmm->abc->K)) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-08-16T21:09:05,721                                                                                                   ^~
2023-08-16T21:09:05,836   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c: In function ‘multiline’:
2023-08-16T21:09:05,838   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:2022:44: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:05,838      if (fwrite(sptr, sizeof(char), n, fp)    != n) ESL_EXCEPTION_SYS(eslEWRITE, "hmm write failed");  /* using fwrite lets us write fixed # of chars   */
2023-08-16T21:09:05,839                                               ^~
2023-08-16T21:09:05,851   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c: In function ‘write_bin_string’:
2023-08-16T21:09:05,853   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:2145:56: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:05,854          if (fwrite((char *) s,    sizeof(char), len, fp) != len) ESL_EXCEPTION_SYS(eslEWRITE, "hmm binary write failed");
2023-08-16T21:09:05,854                                                           ^~
2023-08-16T21:09:10,600   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_scoredata.o from vendor/hmmer/src/p7_scoredata.c
2023-08-16T21:09:10,602   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/p7_scoredata.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_scoredata.o
2023-08-16T21:09:13,124   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/p7_omx.o from vendor/hmmer/src/impl_neon/p7_omx.c
2023-08-16T21:09:13,126   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/p7_omx.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/p7_omx.o
2023-08-16T21:09:13,309   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmpgmd2msa.o from vendor/hmmer/src/hmmpgmd2msa.c
2023-08-16T21:09:13,312   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/hmmpgmd2msa.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmpgmd2msa.o
2023-08-16T21:09:14,527   vendor/hmmer/src/hmmpgmd2msa.c: In function ‘hmmpgmd2msa’:
2023-08-16T21:09:14,528   vendor/hmmer/src/hmmpgmd2msa.c:131:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:09:14,528      for (i = 0; i < stats->nhits; ++i) {
2023-08-16T21:09:14,529                    ^
2023-08-16T21:09:14,529   vendor/hmmer/src/hmmpgmd2msa.c:144:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:09:14,530      for (i=0; i<stats->nhits; i++) {
2023-08-16T21:09:14,531                 ^
2023-08-16T21:09:14,531   vendor/hmmer/src/hmmpgmd2msa.c:163:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:09:14,532        for (i = 0; i < th->N; i++) {
2023-08-16T21:09:14,532                      ^
2023-08-16T21:09:14,533   vendor/hmmer/src/hmmpgmd2msa.c:172:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:09:14,534      for (i = 0; i < th->N; i++) {
2023-08-16T21:09:14,534                    ^
2023-08-16T21:09:14,540   vendor/hmmer/src/hmmpgmd2msa.c: In function ‘hmmpgmd2stats_old’:
2023-08-16T21:09:14,541   vendor/hmmer/src/hmmpgmd2msa.c:311:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:09:14,541      for (i=0; i<stats->nhits; i++) {
2023-08-16T21:09:14,542                 ^
2023-08-16T21:09:14,543   vendor/hmmer/src/hmmpgmd2msa.c:327:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:09:14,543      for (i = 0; i < th.N; i++)
2023-08-16T21:09:14,544                    ^
2023-08-16T21:09:14,551   vendor/hmmer/src/hmmpgmd2msa.c:450:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:09:14,552      for (i = 0; i < th.N; i++) {
2023-08-16T21:09:14,553                    ^
2023-08-16T21:09:14,555   vendor/hmmer/src/hmmpgmd2msa.c:473:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘uint64_t’ {aka ‘long long unsigned int’} [-Wsign-compare]
2023-08-16T21:09:14,555      for (i = 0; i < th.N; i++) {
2023-08-16T21:09:14,556                    ^
2023-08-16T21:09:15,581   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/null2.o from vendor/hmmer/src/impl_neon/null2.c
2023-08-16T21:09:15,581   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/null2.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/null2.o
2023-08-16T21:09:16,688   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/io.o from vendor/hmmer/src/impl_neon/io.c
2023-08-16T21:09:16,691   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/io.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/io.o
2023-08-16T21:09:17,539   generating build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/optacc.o from vendor/hmmer/src/impl_neon/optacc.c
2023-08-16T21:09:17,539   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -mfpu=neon -DeslENABLE_NEON=1 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ibuild/temp.linux-armv7l-cpython-37 -I/usr/include/python3.7m -c vendor/hmmer/src/impl_neon/optacc.c -o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/optacc.o
2023-08-16T21:09:17,794   vendor/hmmer/src/impl_neon/io.c: In function ‘p7_oprofile_Write’:
2023-08-16T21:09:17,795   vendor/hmmer/src/impl_neon/io.c:100:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:17,796      if (fwrite((char *) om->name,         sizeof(char),     n+1,         ffp) != n+1)         ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-08-16T21:09:17,796                                                                                ^~
2023-08-16T21:09:17,798   vendor/hmmer/src/impl_neon/io.c:110:80: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:17,799        if (fwrite( (char *) om->sbv[x],    sizeof(uint8x16_t),  Q16x,        ffp) != Q16x)        ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-08-16T21:09:17,800                                                                                   ^~
2023-08-16T21:09:17,801   vendor/hmmer/src/impl_neon/io.c:113:80: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:17,802        if (fwrite( (char *) om->rbv[x],    sizeof(uint8x16_t),  Q16,         ffp) != Q16)         ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-08-16T21:09:17,803                                                                                   ^~
2023-08-16T21:09:17,804   vendor/hmmer/src/impl_neon/io.c:125:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:17,805      if (fwrite((char *) om->name,         sizeof(char),     n+1,         pfp) != n+1)         ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-08-16T21:09:17,806                                                                                ^~
2023-08-16T21:09:17,807   vendor/hmmer/src/impl_neon/io.c:133:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:17,807        if (fwrite((char *) om->acc,        sizeof(char),     n+1,         pfp) != n+1)         ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-08-16T21:09:17,808                                                                                ^~
2023-08-16T21:09:17,809   vendor/hmmer/src/impl_neon/io.c:142:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:17,810        if (fwrite((char *) om->desc,       sizeof(char),     n+1,         pfp) != n+1)         ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-08-16T21:09:17,810                                                                                ^~
2023-08-16T21:09:17,811   vendor/hmmer/src/impl_neon/io.c:145:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:17,812      if (fwrite((char *) om->rf,           sizeof(char),     om->M+2,     pfp) != om->M+2)     ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-08-16T21:09:17,812                                                                                ^~
2023-08-16T21:09:17,813   vendor/hmmer/src/impl_neon/io.c:146:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:17,814      if (fwrite((char *) om->mm,           sizeof(char),     om->M+2,     pfp) != om->M+2)     ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-08-16T21:09:17,815                                                                                ^~
2023-08-16T21:09:17,815   vendor/hmmer/src/impl_neon/io.c:147:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:17,816      if (fwrite((char *) om->cs,           sizeof(char),     om->M+2,     pfp) != om->M+2)     ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-08-16T21:09:17,817                                                                                ^~
2023-08-16T21:09:17,817   vendor/hmmer/src/impl_neon/io.c:148:77: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:17,818      if (fwrite((char *) om->consensus,    sizeof(char),     om->M+2,     pfp) != om->M+2)     ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-08-16T21:09:17,819                                                                                ^~
2023-08-16T21:09:17,819   vendor/hmmer/src/impl_neon/io.c:151:82: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:17,820      if (fwrite((char *) om->twv,             sizeof(int16x8_t),  8*Q8,        pfp) != 8*Q8)        ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-08-16T21:09:17,820                                                                                     ^~
2023-08-16T21:09:17,821   vendor/hmmer/src/impl_neon/io.c:153:82: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:17,822        if (fwrite( (char *) om->rwv[x],       sizeof(int16x8_t),  Q8,          pfp) != Q8)          ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-08-16T21:09:17,822                                                                                     ^~
2023-08-16T21:09:17,823   vendor/hmmer/src/impl_neon/io.c:162:82: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:17,823      if (fwrite((char *) om->tfv,          sizeof(float32x4_t),   8*Q4,        pfp) != 8*Q4)        ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-08-16T21:09:17,824                                                                                     ^~
2023-08-16T21:09:17,824   vendor/hmmer/src/impl_neon/io.c:164:82: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-16T21:09:17,825        if (fwrite( (char *) om->rfv[x],    sizeof(float32x4_t),   Q4,          pfp) != Q4)          ESL_EXCEPTION_SYS(eslEWRITE, "oprofile write failed");
2023-08-16T21:09:17,826                                                                                     ^~
2023-08-16T21:09:19,553   vendor/hmmer/src/impl_neon/optacc.c: In function ‘p7_OATrace’:
2023-08-16T21:09:19,554   vendor/hmmer/src/impl_neon/optacc.c:268:21: warning: ‘kmax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:09:19,554      int     q     = (k-1) % Q;  /* (q,r) is position of the current DP cell M(i,k) */
2023-08-16T21:09:19,555                      ~~^~~
2023-08-16T21:09:19,555   vendor/hmmer/src/impl_neon/optacc.c:397:16: note: ‘kmax’ was declared here
2023-08-16T21:09:19,555      int    smax, kmax;
2023-08-16T21:09:19,556                   ^~~~
2023-08-16T21:09:19,556   vendor/hmmer/src/impl_neon/optacc.c:272:3: warning: ‘smax’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2023-08-16T21:09:19,557      switch (scur) {
2023-08-16T21:09:19,557      ^~~~~~
2023-08-16T21:09:19,557   vendor/hmmer/src/impl_neon/optacc.c:397:10: note: ‘smax’ was declared here
2023-08-16T21:09:19,558      int    smax, kmax;
2023-08-16T21:09:19,558             ^~~~
2023-08-16T21:10:50,810   arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-37/libhmmer.a build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/build.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/cachedb.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/cachedb_shard.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/emit.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/errors.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/evalues.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/eweight.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_decoding.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback_chk.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_fwdback_banded.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_null2.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_msv.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_optacc.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_stotrace.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_viterbi.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/generic_vtrace.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/h2_io.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/heatmap.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmlogo.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdmstr.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdmstr_shard.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmd_search_status.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdwrkr.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdwrkr_shard.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmdutils.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmer.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/logsum.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/modelconfig.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/modelstats.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/mpisupport.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/seqmodel.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/tracealign.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_alidisplay.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_bg.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_builder.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_domain.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_domaindef.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gbands.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmx.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmxb.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_gmxchk.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hit.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmm.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmcache.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmd_search_stats.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_hmmwindow.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_pipeline.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_prior.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_profile.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_spensemble.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_tophits.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_trace.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/p7_scoredata.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/hmmpgmd2msa.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_alphabet.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_general.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_sse.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/fm_ssv.o build/temp.linux-armv7l-cpython-37/build/temp.linux-armv7l-cpython-37/p7_hmmfile.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/decoding.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/vitfilter.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/mpi.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/fwdback.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/ssvfilter.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/msvfilter.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/stotrace.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/p7_oprofile.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/p7_omx.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/io.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/null2.o build/temp.linux-armv7l-cpython-37/vendor/hmmer/src/impl_neon/optacc.o
2023-08-16T21:10:51,575   running build_ext
2023-08-16T21:12:13,762   Compiling pyhmmer/errors.pyx because it changed.
2023-08-16T21:12:13,763   Compiling pyhmmer/easel.pyx because it changed.
2023-08-16T21:12:13,763   Compiling pyhmmer/plan7.pyx because it changed.
2023-08-16T21:12:13,763   Compiling pyhmmer/daemon.pyx because it changed.
2023-08-16T21:12:13,764   [1/4] Cythonizing pyhmmer/daemon.pyx
2023-08-16T21:12:13,764   [2/4] Cythonizing pyhmmer/easel.pyx
2023-08-16T21:12:13,764   [3/4] Cythonizing pyhmmer/errors.pyx
2023-08-16T21:12:13,765   [4/4] Cythonizing pyhmmer/plan7.pyx
2023-08-16T21:12:13,768   creating tmp
2023-08-16T21:12:13,769   creating tmp/pip-wheel-p5zj6839
2023-08-16T21:12:13,770   creating tmp/pip-wheel-p5zj6839/pyhmmer_7ad4561a035148b180d807096286ff47
2023-08-16T21:12:13,772   creating tmp/pip-wheel-p5zj6839/pyhmmer_7ad4561a035148b180d807096286ff47/build
2023-08-16T21:12:13,773   creating tmp/pip-wheel-p5zj6839/pyhmmer_7ad4561a035148b180d807096286ff47/build/temp.linux-armv7l-cpython-37
2023-08-16T21:12:13,775   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -I/usr/include/python3.7m -c /tmp/pip-wheel-p5zj6839/pyhmmer_7ad4561a035148b180d807096286ff47/build/temp.linux-armv7l-cpython-37/have_getideqtzjp8p.c -o tmp/pip-wheel-p5zj6839/pyhmmer_7ad4561a035148b180d807096286ff47/build/temp.linux-armv7l-cpython-37/have_getideqtzjp8p.o -Werror=implicit-function-declaration
2023-08-16T21:12:14,563   building 'pyhmmer.errors' extension
2023-08-16T21:12:14,565   creating build/temp.linux-armv7l-cpython-37/pyhmmer
2023-08-16T21:12:14,566   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -DHAS_PYINTERPRETERSTATE_GETID=1 -DeslENABLE_NEON=1 -DCYTHON_WITHOUT_ASSERTIONS=1 -Ibuild/temp.linux-armv7l-cpython-37 -Ivendor/easel -I/usr/include/python3.7m -c pyhmmer/errors.c -o build/temp.linux-armv7l-cpython-37/pyhmmer/errors.o -mfpu=neon -Wno-unused-variable
2023-08-16T21:12:48,393   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-armv7l-cpython-37/pyhmmer/errors.o build/temp.linux-armv7l-cpython-37/libeasel.a -Lbuild/temp.linux-armv7l-cpython-37 -L/usr/lib -Lbuild/temp.linux-armv7l-cpython-37 -leasel -ldivsufsort -leasel -lhmmer -o build/lib.linux-armv7l-cpython-37/pyhmmer/errors.cpython-37m-arm-linux-gnueabihf.so -mfpu=neon
2023-08-16T21:13:13,508   building 'pyhmmer.easel' extension
2023-08-16T21:13:13,510   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -DHAS_PYINTERPRETERSTATE_GETID=1 -DeslENABLE_NEON=1 -DCYTHON_WITHOUT_ASSERTIONS=1 -Ibuild/temp.linux-armv7l-cpython-37 -Ivendor/easel -I/usr/include/python3.7m -c pyhmmer/easel.c -o build/temp.linux-armv7l-cpython-37/pyhmmer/easel.o -mfpu=neon -Wno-unused-variable
2023-08-16T21:13:14,361   In file included from pyhmmer/easel.c:1139:
2023-08-16T21:13:14,362   pyhmmer/fileobj/linux.h: In function ‘fileobj_linux_read’:
2023-08-16T21:13:14,362   pyhmmer/fileobj/linux.h:48:13: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:13:14,362        if (len > size) {
2023-08-16T21:13:14,363                ^
2023-08-16T21:21:38,412   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-armv7l-cpython-37/pyhmmer/easel.o build/temp.linux-armv7l-cpython-37/libeasel.a -Lbuild/temp.linux-armv7l-cpython-37 -L/usr/lib -Lbuild/temp.linux-armv7l-cpython-37 -leasel -ldivsufsort -leasel -lhmmer -o build/lib.linux-armv7l-cpython-37/pyhmmer/easel.cpython-37m-arm-linux-gnueabihf.so -mfpu=neon
2023-08-16T21:29:28,085   vendor/easel/esl_sqio.h:124:13: warning: type of ‘esl_sqfile_Open’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,086    extern int  esl_sqfile_Open(const char *seqfile, int fmt, const char *env, ESL_SQFILE **ret_sqfp);
2023-08-16T21:29:28,087                ^
2023-08-16T21:29:28,087   vendor/easel/esl_sqio.c:85:1: note: ‘esl_sqfile_Open’ was previously declared here
2023-08-16T21:29:28,087    esl_sqfile_Open(const char *filename, int format, const char *env, ESL_SQFILE **ret_sqfp)
2023-08-16T21:29:28,088    ^
2023-08-16T21:29:28,088   vendor/easel/esl_sqio.c:85:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,088   vendor/easel/esl_sqio.h:128:13: warning: type of ‘esl_sqfile_SetDigital’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,089    extern int  esl_sqfile_SetDigital(ESL_SQFILE *sqfp, const ESL_ALPHABET *abc);
2023-08-16T21:29:28,089                ^
2023-08-16T21:29:28,089   vendor/easel/esl_sqio.c:286:1: note: ‘esl_sqfile_SetDigital’ was previously declared here
2023-08-16T21:29:28,090    esl_sqfile_SetDigital(ESL_SQFILE *sqfp, const ESL_ALPHABET *abc)
2023-08-16T21:29:28,090    ^
2023-08-16T21:29:28,090   vendor/easel/esl_sqio.c:286:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,090   vendor/easel/esl_sq.h:164:16: warning: type of ‘esl_sq_IsDigital’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,091    extern int     esl_sq_IsDigital(const ESL_SQ *sq);
2023-08-16T21:29:28,092                   ^
2023-08-16T21:29:28,092   vendor/easel/esl_sq.c:492:1: note: ‘esl_sq_IsDigital’ was previously declared here
2023-08-16T21:29:28,093    esl_sq_IsDigital(const ESL_SQ *sq)
2023-08-16T21:29:28,093    ^
2023-08-16T21:29:28,093   vendor/easel/esl_sq.c:492:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,094   pyhmmer/reexports/esl_sqio_ascii.h:18:7: warning: type of ‘sqascii_GuessFileFormat’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,094    int   sqascii_GuessFileFormat(ESL_SQFILE *sqfp, int *ret_fmt);
2023-08-16T21:29:28,094          ^
2023-08-16T21:29:28,095   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:373:1: note: ‘sqascii_GuessFileFormat’ was previously declared here
2023-08-16T21:29:28,095    sqascii_GuessFileFormat(ESL_SQFILE *sqfp, int *ret_fmt)
2023-08-16T21:29:28,095    ^
2023-08-16T21:29:28,096   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:373:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,096   pyhmmer/reexports/esl_sqio_ascii.h:51:6: warning: type of ‘config_embl’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,096    void config_embl(ESL_SQFILE *sqfp);
2023-08-16T21:29:28,096         ^
2023-08-16T21:29:28,097   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2531:1: note: ‘config_embl’ was previously declared here
2023-08-16T21:29:28,097    config_embl(ESL_SQFILE *sqfp)
2023-08-16T21:29:28,097    ^
2023-08-16T21:29:28,098   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2531:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,098   pyhmmer/reexports/esl_sqio_ascii.h:52:6: warning: type of ‘inmap_embl’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,098    void inmap_embl (ESL_SQFILE *sqfp, const ESL_DSQ *abc_inmap);
2023-08-16T21:29:28,099         ^
2023-08-16T21:29:28,099   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2543:1: note: ‘inmap_embl’ was previously declared here
2023-08-16T21:29:28,099    inmap_embl(ESL_SQFILE *sqfp, const ESL_DSQ *abc_inmap)
2023-08-16T21:29:28,099    ^
2023-08-16T21:29:28,100   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2543:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,100   pyhmmer/reexports/esl_sqio_ascii.h:58:6: warning: type of ‘config_genbank’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,100    void config_genbank(ESL_SQFILE *sqfp);
2023-08-16T21:29:28,101         ^
2023-08-16T21:29:28,101   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2780:1: note: ‘config_genbank’ was previously declared here
2023-08-16T21:29:28,101    config_genbank(ESL_SQFILE *sqfp)
2023-08-16T21:29:28,102    ^
2023-08-16T21:29:28,102   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2780:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,102   pyhmmer/reexports/esl_sqio_ascii.h:59:6: warning: type of ‘inmap_genbank’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,103    void inmap_genbank (ESL_SQFILE *sqfp, const ESL_DSQ *abc_inmap);
2023-08-16T21:29:28,103         ^
2023-08-16T21:29:28,103   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2792:1: note: ‘inmap_genbank’ was previously declared here
2023-08-16T21:29:28,103    inmap_genbank(ESL_SQFILE *sqfp, const ESL_DSQ *abc_inmap)
2023-08-16T21:29:28,104    ^
2023-08-16T21:29:28,104   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2792:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,104   pyhmmer/reexports/esl_sqio_ascii.h:65:6: warning: type of ‘config_fasta’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,105    void config_fasta(ESL_SQFILE *sqfp);
2023-08-16T21:29:28,105         ^
2023-08-16T21:29:28,105   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2954:1: note: ‘config_fasta’ was previously declared here
2023-08-16T21:29:28,105    config_fasta(ESL_SQFILE *sqfp)
2023-08-16T21:29:28,106    ^
2023-08-16T21:29:28,106   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2954:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,106   pyhmmer/reexports/esl_sqio_ascii.h:66:6: warning: type of ‘inmap_fasta’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,106    void inmap_fasta (ESL_SQFILE *sqfp, const ESL_DSQ *abc_inmap);
2023-08-16T21:29:28,107         ^
2023-08-16T21:29:28,107   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2966:1: note: ‘inmap_fasta’ was previously declared here
2023-08-16T21:29:28,107    inmap_fasta(ESL_SQFILE *sqfp, const ESL_DSQ *abc_inmap)
2023-08-16T21:29:28,108    ^
2023-08-16T21:29:28,108   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2966:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,108   pyhmmer/reexports/esl_sqio_ascii.h:72:6: warning: type of ‘config_daemon’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,108    void config_daemon(ESL_SQFILE *sqfp);
2023-08-16T21:29:28,109         ^
2023-08-16T21:29:28,109   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:3198:1: note: ‘config_daemon’ was previously declared here
2023-08-16T21:29:28,109    config_daemon(ESL_SQFILE *sqfp)
2023-08-16T21:29:28,110    ^
2023-08-16T21:29:28,110   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:3198:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,110   pyhmmer/reexports/esl_sqio_ascii.h:73:6: warning: type of ‘inmap_daemon’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,111    void inmap_daemon (ESL_SQFILE *sqfp, const ESL_DSQ *abc_inmap);
2023-08-16T21:29:28,111         ^
2023-08-16T21:29:28,111   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:3210:1: note: ‘inmap_daemon’ was previously declared here
2023-08-16T21:29:28,112    inmap_daemon(ESL_SQFILE *sqfp, const ESL_DSQ *abc_inmap)
2023-08-16T21:29:28,112    ^
2023-08-16T21:29:28,112   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:3210:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,113   pyhmmer/reexports/esl_sqio_ascii.h:42:6: warning: type of ‘loadbuf’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,113    int  loadbuf  (ESL_SQFILE *sqfp);
2023-08-16T21:29:28,113         ^
2023-08-16T21:29:28,113   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2117:1: note: ‘loadbuf’ was previously declared here
2023-08-16T21:29:28,114    loadbuf(ESL_SQFILE *sqfp)
2023-08-16T21:29:28,114    ^
2023-08-16T21:29:28,114   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:2117:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,115   pyhmmer/reexports/esl_sqio_ascii.h:77:6: warning: type of ‘fileheader_hmmpgmd’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,115    int  fileheader_hmmpgmd(ESL_SQFILE *sqfp);
2023-08-16T21:29:28,115         ^
2023-08-16T21:29:28,116   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:3379:1: note: ‘fileheader_hmmpgmd’ was previously declared here
2023-08-16T21:29:28,116    fileheader_hmmpgmd(ESL_SQFILE *sqfp)
2023-08-16T21:29:28,116    ^
2023-08-16T21:29:28,116   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:3379:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,117   vendor/easel/esl_sqio_ascii.h:81:13: warning: type of ‘esl_sqascii_WriteFasta’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,117    extern int  esl_sqascii_WriteFasta(FILE *fp, ESL_SQ *s, int update);
2023-08-16T21:29:28,117                ^
2023-08-16T21:29:28,118   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:3159:1: note: ‘esl_sqascii_WriteFasta’ was previously declared here
2023-08-16T21:29:28,118    esl_sqascii_WriteFasta(FILE *fp, ESL_SQ *sq, int save_offsets)
2023-08-16T21:29:28,118    ^
2023-08-16T21:29:28,118   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:3159:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,119   vendor/easel/esl_msafile.h:123:12: warning: type of ‘esl_msafile_Write’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,119    extern int esl_msafile_Write(FILE *fp, ESL_MSA *msa, int fmt);
2023-08-16T21:29:28,119               ^
2023-08-16T21:29:28,120   vendor/easel/esl_msafile.c:1100:1: note: ‘esl_msafile_Write’ was previously declared here
2023-08-16T21:29:28,120    esl_msafile_Write(FILE *fp, ESL_MSA *msa, int fmt)
2023-08-16T21:29:28,120    ^
2023-08-16T21:29:28,120   vendor/easel/esl_msafile.c:1100:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,121   vendor/easel/esl_msa.h:198:17: warning: type of ‘esl_msa_Compare’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,121    extern int      esl_msa_Compare         (ESL_MSA *a1, ESL_MSA *a2);
2023-08-16T21:29:28,121                    ^
2023-08-16T21:29:28,122   vendor/easel/esl_msa.c:3204:1: note: ‘esl_msa_Compare’ was previously declared here
2023-08-16T21:29:28,122    esl_msa_Compare(ESL_MSA *a1, ESL_MSA *a2)
2023-08-16T21:29:28,122    ^
2023-08-16T21:29:28,122   vendor/easel/esl_msa.c:3204:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,123   vendor/easel/esl_msa.h:152:12: warning: type of ‘esl_msa_SetAccession’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,123    extern int esl_msa_SetAccession     (ESL_MSA *msa, const char *s, esl_pos_t n);
2023-08-16T21:29:28,123               ^
2023-08-16T21:29:28,124   vendor/easel/esl_msa.c:1090:1: note: ‘esl_msa_SetAccession’ was previously declared here
2023-08-16T21:29:28,124    esl_msa_SetAccession(ESL_MSA *msa, const char *s, esl_pos_t n)
2023-08-16T21:29:28,125    ^
2023-08-16T21:29:28,125   vendor/easel/esl_msa.c:1090:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,126   vendor/easel/esl_msa.h:153:12: warning: type of ‘esl_msa_SetAuthor’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,126    extern int esl_msa_SetAuthor        (ESL_MSA *msa, const char *s, esl_pos_t n);
2023-08-16T21:29:28,126               ^
2023-08-16T21:29:28,127   vendor/easel/esl_msa.c:1118:1: note: ‘esl_msa_SetAuthor’ was previously declared here
2023-08-16T21:29:28,127    esl_msa_SetAuthor(ESL_MSA *msa, const char *s, esl_pos_t n)
2023-08-16T21:29:28,127    ^
2023-08-16T21:29:28,128   vendor/easel/esl_msa.c:1118:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,128   vendor/easel/esl_msa.h:150:12: warning: type of ‘esl_msa_SetName’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,128    extern int esl_msa_SetName          (ESL_MSA *msa, const char *s, esl_pos_t n);
2023-08-16T21:29:28,129               ^
2023-08-16T21:29:28,129   vendor/easel/esl_msa.c:1035:1: note: ‘esl_msa_SetName’ was previously declared here
2023-08-16T21:29:28,129    esl_msa_SetName(ESL_MSA *msa, const char *s, esl_pos_t n)
2023-08-16T21:29:28,130    ^
2023-08-16T21:29:28,130   vendor/easel/esl_msa.c:1035:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,131   vendor/easel/esl_msa.h:151:12: warning: type of ‘esl_msa_SetDesc’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,131    extern int esl_msa_SetDesc          (ESL_MSA *msa, const char *s, esl_pos_t n);
2023-08-16T21:29:28,131               ^
2023-08-16T21:29:28,132   vendor/easel/esl_msa.c:1063:1: note: ‘esl_msa_SetDesc’ was previously declared here
2023-08-16T21:29:28,132    esl_msa_SetDesc(ESL_MSA *msa, const char *s, esl_pos_t n)
2023-08-16T21:29:28,133    ^
2023-08-16T21:29:28,133   vendor/easel/esl_msa.c:1063:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,134   vendor/easel/esl_sq.h:193:16: warning: type of ‘esl_sq_FetchFromMSA’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,134    extern int     esl_sq_FetchFromMSA(const ESL_MSA *msa, int which, ESL_SQ **ret_sq);
2023-08-16T21:29:28,134                   ^
2023-08-16T21:29:28,135   vendor/easel/esl_sq.c:1884:1: note: ‘esl_sq_FetchFromMSA’ was previously declared here
2023-08-16T21:29:28,135    esl_sq_FetchFromMSA(const ESL_MSA *msa, int which, ESL_SQ **ret_sq)
2023-08-16T21:29:28,136    ^
2023-08-16T21:29:28,136   vendor/easel/esl_sq.c:1884:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,137   vendor/easel/esl_msa.h:140:17: warning: type of ‘esl_msa_Destroy’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,137    extern void     esl_msa_Destroy(ESL_MSA *msa);
2023-08-16T21:29:28,138                    ^
2023-08-16T21:29:28,138   vendor/easel/esl_msa.c:505:1: note: ‘esl_msa_Destroy’ was previously declared here
2023-08-16T21:29:28,138    esl_msa_Destroy(ESL_MSA *msa)
2023-08-16T21:29:28,139    ^
2023-08-16T21:29:28,139   vendor/easel/esl_msa.c:505:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,139   vendor/easel/esl_sq.h:169:16: warning: type of ‘esl_sq_SetAccession’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,140    extern int     esl_sq_SetAccession   (ESL_SQ *sq, const char *acc);
2023-08-16T21:29:28,140                   ^
2023-08-16T21:29:28,140   vendor/easel/esl_sq.c:1087:1: note: ‘esl_sq_SetAccession’ was previously declared here
2023-08-16T21:29:28,141    esl_sq_SetAccession(ESL_SQ *sq, const char *acc)
2023-08-16T21:29:28,141    ^
2023-08-16T21:29:28,141   vendor/easel/esl_sq.c:1087:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,142   vendor/easel/esl_sq.h:168:16: warning: type of ‘esl_sq_SetName’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,142    extern int     esl_sq_SetName        (ESL_SQ *sq, const char *name);
2023-08-16T21:29:28,142                   ^
2023-08-16T21:29:28,142   vendor/easel/esl_sq.c:1049:1: note: ‘esl_sq_SetName’ was previously declared here
2023-08-16T21:29:28,143    esl_sq_SetName(ESL_SQ *sq, const char *name)
2023-08-16T21:29:28,143    ^
2023-08-16T21:29:28,143   vendor/easel/esl_sq.c:1049:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,144   vendor/easel/esl_sq.h:170:16: warning: type of ‘esl_sq_SetDesc’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,144    extern int     esl_sq_SetDesc        (ESL_SQ *sq, const char *desc);
2023-08-16T21:29:28,144                   ^
2023-08-16T21:29:28,144   vendor/easel/esl_sq.c:1127:1: note: ‘esl_sq_SetDesc’ was previously declared here
2023-08-16T21:29:28,145    esl_sq_SetDesc(ESL_SQ *sq, const char *desc)
2023-08-16T21:29:28,145    ^
2023-08-16T21:29:28,145   vendor/easel/esl_sq.c:1127:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,146   vendor/easel/esl_sq.h:171:16: warning: type of ‘esl_sq_SetSource’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,146    extern int     esl_sq_SetSource      (ESL_SQ *sq, const char *source);
2023-08-16T21:29:28,146                   ^
2023-08-16T21:29:28,146   vendor/easel/esl_sq.c:1165:1: note: ‘esl_sq_SetSource’ was previously declared here
2023-08-16T21:29:28,147    esl_sq_SetSource(ESL_SQ *sq, const char *source)
2023-08-16T21:29:28,147    ^
2023-08-16T21:29:28,147   vendor/easel/esl_sq.c:1165:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,148   vendor/easel/esl_sq.h:165:16: warning: type of ‘esl_sq_IsText’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,148    extern int     esl_sq_IsText   (const ESL_SQ *sq);
2023-08-16T21:29:28,148                   ^
2023-08-16T21:29:28,148   vendor/easel/esl_sq.c:506:1: note: ‘esl_sq_IsText’ was previously declared here
2023-08-16T21:29:28,149    esl_sq_IsText(const ESL_SQ *sq)
2023-08-16T21:29:28,149    ^
2023-08-16T21:29:28,149   vendor/easel/esl_sq.c:506:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,149   vendor/easel/esl_sq.h:166:16: warning: type of ‘esl_sq_Destroy’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,150    extern void    esl_sq_Destroy  (ESL_SQ *sq);
2023-08-16T21:29:28,150                   ^
2023-08-16T21:29:28,150   vendor/easel/esl_sq.c:550:1: note: ‘esl_sq_Destroy’ was previously declared here
2023-08-16T21:29:28,151    esl_sq_Destroy(ESL_SQ *sq)
2023-08-16T21:29:28,151    ^
2023-08-16T21:29:28,151   vendor/easel/esl_sq.c:550:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,152   vendor/easel/esl_msa.h:136:17: warning: type of ‘esl_msa_Create’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,152    extern ESL_MSA *esl_msa_Create(int nseq, int64_t alen);
2023-08-16T21:29:28,152                    ^
2023-08-16T21:29:28,152   vendor/easel/esl_msa.c:86:1: note: ‘esl_msa_Create’ was previously declared here
2023-08-16T21:29:28,153    esl_msa_Create(int nseq, int64_t alen)
2023-08-16T21:29:28,153    ^
2023-08-16T21:29:28,153   vendor/easel/esl_msa.c:86:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,153   vendor/easel/esl_sqio.h:136:14: warning: type of ‘esl_sqio_Parse’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,154    extern int   esl_sqio_Parse       (char *buffer, int size, ESL_SQ *s, int format);
2023-08-16T21:29:28,154                 ^
2023-08-16T21:29:28,154   vendor/easel/esl_sqio.c:543:1: note: ‘esl_sqio_Parse’ was previously declared here
2023-08-16T21:29:28,155    esl_sqio_Parse(char *buf, int size, ESL_SQ *s, int format)
2023-08-16T21:29:28,155    ^
2023-08-16T21:29:28,155   vendor/easel/esl_sqio.c:543:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,155   vendor/easel/esl_sqio.h:131:14: warning: type of ‘esl_sqio_Read’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,156    extern int   esl_sqio_Read        (ESL_SQFILE *sqfp, ESL_SQ *sq);
2023-08-16T21:29:28,156                 ^
2023-08-16T21:29:28,156   vendor/easel/esl_sqio.c:356:1: note: ‘esl_sqio_Read’ was previously declared here
2023-08-16T21:29:28,157    esl_sqio_Read(ESL_SQFILE *sqfp, ESL_SQ *sq)
2023-08-16T21:29:28,157    ^
2023-08-16T21:29:28,157   vendor/easel/esl_sqio.c:356:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,157   vendor/easel/esl_sqio.h:132:14: warning: type of ‘esl_sqio_ReadInfo’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,158    extern int   esl_sqio_ReadInfo    (ESL_SQFILE *sqfp, ESL_SQ *sq);
2023-08-16T21:29:28,158                 ^
2023-08-16T21:29:28,158   vendor/easel/esl_sqio.c:378:1: note: ‘esl_sqio_ReadInfo’ was previously declared here
2023-08-16T21:29:28,159    esl_sqio_ReadInfo(ESL_SQFILE *sqfp, ESL_SQ *sq)
2023-08-16T21:29:28,159    ^
2023-08-16T21:29:28,159   vendor/easel/esl_sqio.c:378:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,159   vendor/easel/esl_sqio.h:134:14: warning: type of ‘esl_sqio_ReadSequence’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,160    extern int   esl_sqio_ReadSequence(ESL_SQFILE *sqfp, ESL_SQ *sq);
2023-08-16T21:29:28,160                 ^
2023-08-16T21:29:28,160   vendor/easel/esl_sqio.c:399:1: note: ‘esl_sqio_ReadSequence’ was previously declared here
2023-08-16T21:29:28,161    esl_sqio_ReadSequence(ESL_SQFILE *sqfp, ESL_SQ *sq)
2023-08-16T21:29:28,161    ^
2023-08-16T21:29:28,161   vendor/easel/esl_sqio.c:399:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,161   vendor/easel/esl_msa.h:145:17: warning: type of ‘esl_msa_Digitize’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,162    extern int      esl_msa_Digitize(const ESL_ALPHABET *abc, ESL_MSA *msa, char *errmsg);
2023-08-16T21:29:28,162                    ^
2023-08-16T21:29:28,162   vendor/easel/esl_msa.c:875:1: note: ‘esl_msa_Digitize’ was previously declared here
2023-08-16T21:29:28,163    esl_msa_Digitize(const ESL_ALPHABET *abc, ESL_MSA *msa, char *errbuf)
2023-08-16T21:29:28,163    ^
2023-08-16T21:29:28,163   vendor/easel/esl_msa.c:875:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,163   vendor/easel/esl_msafile.h:119:13: warning: type of ‘esl_msafile_Read’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,164    extern int  esl_msafile_Read(ESL_MSAFILE *afp, ESL_MSA **ret_msa);
2023-08-16T21:29:28,164                ^
2023-08-16T21:29:28,164   vendor/easel/esl_msafile.c:997:1: note: ‘esl_msafile_Read’ was previously declared here
2023-08-16T21:29:28,165    esl_msafile_Read(ESL_MSAFILE *afp, ESL_MSA **ret_msa)
2023-08-16T21:29:28,165    ^
2023-08-16T21:29:28,165   vendor/easel/esl_msafile.c:997:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,165   vendor/easel/esl_sqio.h:129:13: warning: type of ‘esl_sqfile_GuessAlphabet’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,166    extern int  esl_sqfile_GuessAlphabet(ESL_SQFILE *sqfp, int *ret_type);
2023-08-16T21:29:28,166                ^
2023-08-16T21:29:28,166   vendor/easel/esl_sqio.c:322:1: note: ‘esl_sqfile_GuessAlphabet’ was previously declared here
2023-08-16T21:29:28,167    esl_sqfile_GuessAlphabet(ESL_SQFILE *sqfp, int *ret_type)
2023-08-16T21:29:28,167    ^
2023-08-16T21:29:28,167   vendor/easel/esl_sqio.c:322:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,167   vendor/easel/esl_sqio.h:141:14: warning: type of ‘esl_sqfile_GetErrorBuf’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,168    const char  *esl_sqfile_GetErrorBuf(const ESL_SQFILE *sqfp);
2023-08-16T21:29:28,168                 ^
2023-08-16T21:29:28,168   vendor/easel/esl_sqio.c:660:1: note: ‘esl_sqfile_GetErrorBuf’ was previously declared here
2023-08-16T21:29:28,169    esl_sqfile_GetErrorBuf(const ESL_SQFILE *sqfp)
2023-08-16T21:29:28,169    ^
2023-08-16T21:29:28,169   vendor/easel/esl_sqio.c:660:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,169   vendor/easel/esl_msa.h:186:12: warning: type of ‘esl_msa_Checksum’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,170    extern int esl_msa_Checksum(const ESL_MSA *msa, uint32_t *ret_checksum);
2023-08-16T21:29:28,170               ^
2023-08-16T21:29:28,170   vendor/easel/esl_msa.c:2802:1: note: ‘esl_msa_Checksum’ was previously declared here
2023-08-16T21:29:28,171    esl_msa_Checksum(const ESL_MSA *msa, uint32_t *ret_checksum)
2023-08-16T21:29:28,171    ^
2023-08-16T21:29:28,171   vendor/easel/esl_msa.c:2802:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,172   vendor/easel/esl_sq.h:180:16: warning: type of ‘esl_sq_Checksum’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,172    extern int     esl_sq_Checksum(const ESL_SQ *sq, uint32_t *ret_checksum);
2023-08-16T21:29:28,172                   ^
2023-08-16T21:29:28,172   vendor/easel/esl_sq.c:1631:1: note: ‘esl_sq_Checksum’ was previously declared here
2023-08-16T21:29:28,173    esl_sq_Checksum(const ESL_SQ *sq, uint32_t *ret_checksum)
2023-08-16T21:29:28,173    ^
2023-08-16T21:29:28,173   vendor/easel/esl_sq.c:1631:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,173   vendor/easel/esl_msa.h:146:17: warning: type of ‘esl_msa_Textize’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,174    extern int      esl_msa_Textize(ESL_MSA *msa);
2023-08-16T21:29:28,174                    ^
2023-08-16T21:29:28,174   vendor/easel/esl_msa.c:935:1: note: ‘esl_msa_Textize’ was previously declared here
2023-08-16T21:29:28,175    esl_msa_Textize(ESL_MSA *msa)
2023-08-16T21:29:28,175    ^
2023-08-16T21:29:28,175   vendor/easel/esl_msa.c:935:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,175   vendor/easel/esl_msa.h:139:17: warning: type of ‘esl_msa_Clone’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,176    extern ESL_MSA *esl_msa_Clone(const ESL_MSA *msa);
2023-08-16T21:29:28,176                    ^
2023-08-16T21:29:28,176   vendor/easel/esl_msa.c:407:1: note: ‘esl_msa_Clone’ was previously declared here
2023-08-16T21:29:28,177    esl_msa_Clone(const ESL_MSA *msa)
2023-08-16T21:29:28,177    ^
2023-08-16T21:29:28,177   vendor/easel/esl_msa.c:407:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,178   vendor/easel/esl_sq.h:183:16: warning: type of ‘esl_sq_CreateDigital’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,178    extern ESL_SQ *esl_sq_CreateDigital(const ESL_ALPHABET *abc);
2023-08-16T21:29:28,178                   ^
2023-08-16T21:29:28,178   vendor/easel/esl_sq.c:730:1: note: ‘esl_sq_CreateDigital’ was previously declared here
2023-08-16T21:29:28,179    esl_sq_CreateDigital(const ESL_ALPHABET *abc)
2023-08-16T21:29:28,179    ^
2023-08-16T21:29:28,179   vendor/easel/esl_sq.c:730:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,180   vendor/easel/esl_msa.h:192:12: warning: type of ‘esl_msa_Hash’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,180    extern int esl_msa_Hash(ESL_MSA *msa);
2023-08-16T21:29:28,180               ^
2023-08-16T21:29:28,180   vendor/easel/esl_msa.c:3050:1: note: ‘esl_msa_Hash’ was previously declared here
2023-08-16T21:29:28,181    esl_msa_Hash(ESL_MSA *msa)
2023-08-16T21:29:28,181    ^
2023-08-16T21:29:28,181   vendor/easel/esl_msa.c:3050:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,182   vendor/easel/esl_msa.h:154:12: warning: type of ‘esl_msa_SetSeqName’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,182    extern int esl_msa_SetSeqName       (ESL_MSA *msa, int idx, const char *s, esl_pos_t n);
2023-08-16T21:29:28,182               ^
2023-08-16T21:29:28,182   vendor/easel/esl_msa.c:1147:1: note: ‘esl_msa_SetSeqName’ was previously declared here
2023-08-16T21:29:28,183    esl_msa_SetSeqName(ESL_MSA *msa, int idx, const char *s, esl_pos_t n)
2023-08-16T21:29:28,183    ^
2023-08-16T21:29:28,183   vendor/easel/esl_msa.c:1147:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,184   vendor/easel/esl_msa.h:155:12: warning: type of ‘esl_msa_SetSeqAccession’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,184    extern int esl_msa_SetSeqAccession  (ESL_MSA *msa, int idx, const char *s, esl_pos_t n);
2023-08-16T21:29:28,184               ^
2023-08-16T21:29:28,184   vendor/easel/esl_msa.c:1178:1: note: ‘esl_msa_SetSeqAccession’ was previously declared here
2023-08-16T21:29:28,185    esl_msa_SetSeqAccession(ESL_MSA *msa, int idx, const char *s, esl_pos_t n)
2023-08-16T21:29:28,185    ^
2023-08-16T21:29:28,185   vendor/easel/esl_msa.c:1178:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,186   vendor/easel/esl_msa.h:156:12: warning: type of ‘esl_msa_SetSeqDescription’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,186    extern int esl_msa_SetSeqDescription(ESL_MSA *msa, int idx, const char *s, esl_pos_t n);
2023-08-16T21:29:28,186               ^
2023-08-16T21:29:28,186   vendor/easel/esl_msa.c:1230:1: note: ‘esl_msa_SetSeqDescription’ was previously declared here
2023-08-16T21:29:28,187    esl_msa_SetSeqDescription(ESL_MSA *msa, int idx, const char *s, esl_pos_t n)
2023-08-16T21:29:28,188    ^
2023-08-16T21:29:28,188   vendor/easel/esl_msa.c:1230:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,189   vendor/easel/esl_msa.h:144:17: warning: type of ‘esl_msa_CreateDigital’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,189    extern ESL_MSA *esl_msa_CreateDigital(const ESL_ALPHABET *abc, int nseq, int64_t alen);
2023-08-16T21:29:28,190                    ^
2023-08-16T21:29:28,190   vendor/easel/esl_msa.c:811:1: note: ‘esl_msa_CreateDigital’ was previously declared here
2023-08-16T21:29:28,190    esl_msa_CreateDigital(const ESL_ALPHABET *abc, int nseq, int64_t alen)
2023-08-16T21:29:28,191    ^
2023-08-16T21:29:28,191   vendor/easel/esl_msa.c:811:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,192   vendor/easel/esl_sq.h:157:16: warning: type of ‘esl_sq_CreateFrom’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,192    extern ESL_SQ *esl_sq_CreateFrom(const char *name, const char *seq,
2023-08-16T21:29:28,192                   ^
2023-08-16T21:29:28,193   vendor/easel/esl_sq.c:93:1: note: ‘esl_sq_CreateFrom’ was previously declared here
2023-08-16T21:29:28,193    esl_sq_CreateFrom(const char *name, const char *seq, const char *desc, const char *acc, const char *ss)
2023-08-16T21:29:28,193    ^
2023-08-16T21:29:28,194   vendor/easel/esl_sq.c:93:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,194   vendor/easel/esl_sq.h:156:16: warning: type of ‘esl_sq_Create’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,194    extern ESL_SQ *esl_sq_Create(void);
2023-08-16T21:29:28,194                   ^
2023-08-16T21:29:28,195   vendor/easel/esl_sq.c:58:1: note: ‘esl_sq_Create’ was previously declared here
2023-08-16T21:29:28,195    esl_sq_Create(void)
2023-08-16T21:29:28,195    ^
2023-08-16T21:29:28,196   vendor/easel/esl_sq.c:58:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,196   vendor/easel/esl_sq.h:179:16: warning: type of ‘esl_sq_ReverseComplement’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,196    extern int     esl_sq_ReverseComplement(ESL_SQ *sq);
2023-08-16T21:29:28,197                   ^
2023-08-16T21:29:28,197   vendor/easel/esl_sq.c:1536:1: note: ‘esl_sq_ReverseComplement’ was previously declared here
2023-08-16T21:29:28,197    esl_sq_ReverseComplement(ESL_SQ *sq)
2023-08-16T21:29:28,197    ^
2023-08-16T21:29:28,198   vendor/easel/esl_sq.c:1536:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,198   vendor/easel/esl_sq.h:162:16: warning: type of ‘esl_sq_Compare’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,198    extern int     esl_sq_Compare  (ESL_SQ *sq1, ESL_SQ *sq2);
2023-08-16T21:29:28,199                   ^
2023-08-16T21:29:28,199   vendor/easel/esl_sq.c:373:1: note: ‘esl_sq_Compare’ was previously declared here
2023-08-16T21:29:28,199    esl_sq_Compare(ESL_SQ *sq1, ESL_SQ *sq2)
2023-08-16T21:29:28,199    ^
2023-08-16T21:29:28,200   vendor/easel/esl_sq.c:373:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,200   vendor/easel/esl_sq.h:160:16: warning: type of ‘esl_sq_GrowTo’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,200    extern int     esl_sq_GrowTo(ESL_SQ *sq, int64_t  n);
2023-08-16T21:29:28,201                   ^
2023-08-16T21:29:28,201   vendor/easel/esl_sq.c:209:1: note: ‘esl_sq_GrowTo’ was previously declared here
2023-08-16T21:29:28,201    esl_sq_GrowTo(ESL_SQ *sq, int64_t n)
2023-08-16T21:29:28,202    ^
2023-08-16T21:29:28,202   vendor/easel/esl_sq.c:209:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,202   vendor/easel/esl_ssi.h:111:13: warning: type of ‘esl_ssi_Open’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,202    extern int  esl_ssi_Open(const char *filename, ESL_SSI **ret_ssi);
2023-08-16T21:29:28,203                ^
2023-08-16T21:29:28,203   vendor/easel/esl_ssi.c:51:1: note: ‘esl_ssi_Open’ was previously declared here
2023-08-16T21:29:28,203    esl_ssi_Open(const char *filename, ESL_SSI **ret_ssi)
2023-08-16T21:29:28,204    ^
2023-08-16T21:29:28,204   vendor/easel/esl_ssi.c:51:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,204   vendor/easel/esl_ssi.h:127:13: warning: type of ‘esl_newssi_AddKey’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,205    extern int  esl_newssi_AddKey   (ESL_NEWSSI *ns, const char *key, uint16_t fh, off_t r_off, off_t d_off, int64_t L);
2023-08-16T21:29:28,205                ^
2023-08-16T21:29:28,205   vendor/easel/esl_ssi.c:843:1: note: type mismatch in parameter 4
2023-08-16T21:29:28,205    esl_newssi_AddKey(ESL_NEWSSI *ns, const char *key, uint16_t fh,
2023-08-16T21:29:28,206    ^
2023-08-16T21:29:28,206   vendor/easel/esl_ssi.c:843:1: note: ‘esl_newssi_AddKey’ was previously declared here
2023-08-16T21:29:28,206   vendor/easel/esl_ssi.c:843:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,206   vendor/easel/esl_sq.h:163:16: warning: type of ‘esl_sq_Reuse’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,207    extern int     esl_sq_Reuse    (ESL_SQ *sq);
2023-08-16T21:29:28,207                   ^
2023-08-16T21:29:28,207   vendor/easel/esl_sq.c:443:1: note: ‘esl_sq_Reuse’ was previously declared here
2023-08-16T21:29:28,208    esl_sq_Reuse(ESL_SQ *sq)
2023-08-16T21:29:28,208    ^
2023-08-16T21:29:28,208   vendor/easel/esl_sq.c:443:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,208   vendor/easel/esl_sqio.h:146:14: warning: type of ‘esl_sqfile_Position’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,209    extern int   esl_sqfile_Position(ESL_SQFILE *sqfp, off_t offset);
2023-08-16T21:29:28,209                 ^
2023-08-16T21:29:28,209   vendor/easel/esl_sqio.c:787:1: note: type mismatch in parameter 2
2023-08-16T21:29:28,210    esl_sqfile_Position(ESL_SQFILE *sqfp, off_t offset)
2023-08-16T21:29:28,210    ^
2023-08-16T21:29:28,210   vendor/easel/esl_sqio.c:787:1: note: ‘esl_sqfile_Position’ was previously declared here
2023-08-16T21:29:28,211   vendor/easel/esl_sqio.c:787:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,211   vendor/easel/esl_ssi.h:119:13: warning: type of ‘esl_ssi_FileInfo’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,212    extern int  esl_ssi_FileInfo(ESL_SSI *ssi, uint16_t fh, char **ret_filename, int *ret_format);
2023-08-16T21:29:28,212                ^
2023-08-16T21:29:28,213   vendor/easel/esl_ssi.c:486:1: note: ‘esl_ssi_FileInfo’ was previously declared here
2023-08-16T21:29:28,213    esl_ssi_FileInfo(ESL_SSI *ssi, uint16_t fh, char **ret_filename, int *ret_format)
2023-08-16T21:29:28,214    ^
2023-08-16T21:29:28,214   vendor/easel/esl_ssi.c:486:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,214   vendor/easel/esl_ssi.h:113:13: warning: type of ‘esl_ssi_FindName’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,215    extern int  esl_ssi_FindName(ESL_SSI *ssi, const char *key,
2023-08-16T21:29:28,215                ^
2023-08-16T21:29:28,215   vendor/easel/esl_ssi.c:172:1: note: ‘esl_ssi_FindName’ was previously declared here
2023-08-16T21:29:28,215    esl_ssi_FindName(ESL_SSI *ssi, const char *key, uint16_t *ret_fh, off_t *ret_roff, off_t *opt_doff, int64_t *opt_L)
2023-08-16T21:29:28,216    ^
2023-08-16T21:29:28,216   vendor/easel/esl_ssi.c:172:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,217   vendor/easel/esl_sq.h:161:16: warning: type of ‘esl_sq_Copy’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,217    extern int     esl_sq_Copy(const ESL_SQ *src, ESL_SQ *dst);
2023-08-16T21:29:28,217                   ^
2023-08-16T21:29:28,218   vendor/easel/esl_sq.c:265:1: note: ‘esl_sq_Copy’ was previously declared here
2023-08-16T21:29:28,218    esl_sq_Copy(const ESL_SQ *src, ESL_SQ *dst)
2023-08-16T21:29:28,218    ^
2023-08-16T21:29:28,219   vendor/easel/esl_sq.c:265:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,219   vendor/easel/esl_sqio.h:125:13: warning: type of ‘esl_sqfile_Close’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,219    extern void esl_sqfile_Close(ESL_SQFILE *sqfp);
2023-08-16T21:29:28,220                ^
2023-08-16T21:29:28,220   vendor/easel/esl_sqio.c:99:1: note: ‘esl_sqfile_Close’ was previously declared here
2023-08-16T21:29:28,221    esl_sqfile_Close(ESL_SQFILE *sqfp)
2023-08-16T21:29:28,221    ^
2023-08-16T21:29:28,221   vendor/easel/esl_sqio.c:99:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,222   vendor/easel/esl_ssi.h:112:13: warning: type of ‘esl_ssi_Close’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,222    extern void esl_ssi_Close(ESL_SSI *ssi);
2023-08-16T21:29:28,222                ^
2023-08-16T21:29:28,222   vendor/easel/esl_ssi.c:510:1: note: ‘esl_ssi_Close’ was previously declared here
2023-08-16T21:29:28,223    esl_ssi_Close(ESL_SSI *ssi)
2023-08-16T21:29:28,223    ^
2023-08-16T21:29:28,223   vendor/easel/esl_ssi.c:510:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,224   pyhmmer/reexports/esl_sqio_ascii.h:31:13: warning: type of ‘sqascii_GetError’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,224    const char *sqascii_GetError (const ESL_SQFILE *sqfp);
2023-08-16T21:29:28,224                ^
2023-08-16T21:29:28,225   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:712:1: note: ‘sqascii_GetError’ was previously declared here
2023-08-16T21:29:28,225    sqascii_GetError(const ESL_SQFILE *sqfp)
2023-08-16T21:29:28,225    ^
2023-08-16T21:29:28,225   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:712:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,226   pyhmmer/reexports/esl_sqio_ascii.h:38:7: warning: type of ‘sqascii_FetchSubseq’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,226    int   sqascii_FetchSubseq     (ESL_SQFILE *sqfp, const char *source, int64_t start, int64_t end, ESL_SQ *sq);
2023-08-16T21:29:28,226          ^
2023-08-16T21:29:28,227   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1949:1: note: ‘sqascii_FetchSubseq’ was previously declared here
2023-08-16T21:29:28,227    sqascii_FetchSubseq(ESL_SQFILE *sqfp, const char *source, int64_t start, int64_t end, ESL_SQ *sq)
2023-08-16T21:29:28,227    ^
2023-08-16T21:29:28,228   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1949:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,228   pyhmmer/reexports/esl_sqio_ascii.h:37:7: warning: type of ‘sqascii_FetchInfo’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,228    int   sqascii_FetchInfo       (ESL_SQFILE *sqfp, const char *key, ESL_SQ *sq);
2023-08-16T21:29:28,228          ^
2023-08-16T21:29:28,229   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1905:1: note: ‘sqascii_FetchInfo’ was previously declared here
2023-08-16T21:29:28,229    sqascii_FetchInfo(ESL_SQFILE *sqfp, const char *key, ESL_SQ *sq)
2023-08-16T21:29:28,229    ^
2023-08-16T21:29:28,230   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1905:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,230   pyhmmer/reexports/esl_sqio_ascii.h:36:7: warning: type of ‘sqascii_Fetch’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,230    int   sqascii_Fetch           (ESL_SQFILE *sqfp, const char *key, ESL_SQ *sq);
2023-08-16T21:29:28,231          ^
2023-08-16T21:29:28,231   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1874:1: note: ‘sqascii_Fetch’ was previously declared here
2023-08-16T21:29:28,231    sqascii_Fetch(ESL_SQFILE *sqfp, const char *key, ESL_SQ *sq)
2023-08-16T21:29:28,232    ^
2023-08-16T21:29:28,232   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1874:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,232   pyhmmer/reexports/esl_sqio_ascii.h:35:7: warning: type of ‘sqascii_PositionByNumber’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,232    int   sqascii_PositionByNumber(ESL_SQFILE *sqfp, int which);
2023-08-16T21:29:28,233          ^
2023-08-16T21:29:28,233   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1842:1: note: ‘sqascii_PositionByNumber’ was previously declared here
2023-08-16T21:29:28,233    sqascii_PositionByNumber(ESL_SQFILE *sqfp, int which)
2023-08-16T21:29:28,234    ^
2023-08-16T21:29:28,234   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1842:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,234   pyhmmer/reexports/esl_sqio_ascii.h:34:7: warning: type of ‘sqascii_PositionByKey’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,235    int   sqascii_PositionByKey   (ESL_SQFILE *sqfp, const char *key);
2023-08-16T21:29:28,235          ^
2023-08-16T21:29:28,235   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1794:1: note: ‘sqascii_PositionByKey’ was previously declared here
2023-08-16T21:29:28,235    sqascii_PositionByKey(ESL_SQFILE *sqfp, const char *key)
2023-08-16T21:29:28,236    ^
2023-08-16T21:29:28,236   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1794:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,236   pyhmmer/reexports/esl_sqio_ascii.h:33:7: warning: type of ‘sqascii_OpenSSI’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,237    int   sqascii_OpenSSI         (ESL_SQFILE *sqfp, const char *ssifile_hint);
2023-08-16T21:29:28,237          ^
2023-08-16T21:29:28,237   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1737:1: note: ‘sqascii_OpenSSI’ was previously declared here
2023-08-16T21:29:28,237    sqascii_OpenSSI(ESL_SQFILE *sqfp, const char *ssifile_hint)
2023-08-16T21:29:28,238    ^
2023-08-16T21:29:28,238   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1737:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,238   pyhmmer/reexports/esl_sqio_ascii.h:27:7: warning: type of ‘sqascii_ReadBlock’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,239    int   sqascii_ReadBlock      (ESL_SQFILE *sqfp, ESL_SQ_BLOCK *sqBlock, int max_residues, int max_sequences, int max_init_window, int long_target);
2023-08-16T21:29:28,239          ^
2023-08-16T21:29:28,239   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1456:1: note: ‘sqascii_ReadBlock’ was previously declared here
2023-08-16T21:29:28,240    sqascii_ReadBlock(ESL_SQFILE *sqfp, ESL_SQ_BLOCK *sqBlock, int max_residues, int max_sequences, int max_init_window, int long_target)
2023-08-16T21:29:28,240    ^
2023-08-16T21:29:28,240   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1456:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,241   pyhmmer/reexports/esl_sqio_ascii.h:28:7: warning: type of ‘sqascii_Echo’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,241    int   sqascii_Echo           (ESL_SQFILE *sqfp, const ESL_SQ *sq, FILE *ofp);
2023-08-16T21:29:28,241          ^
2023-08-16T21:29:28,242   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1639:1: note: ‘sqascii_Echo’ was previously declared here
2023-08-16T21:29:28,242    sqascii_Echo(ESL_SQFILE *sqfp, const ESL_SQ *sq, FILE *ofp)
2023-08-16T21:29:28,242    ^
2023-08-16T21:29:28,243   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1639:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,243   pyhmmer/reexports/esl_sqio_ascii.h:26:7: warning: type of ‘sqascii_ReadWindow’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,244    int   sqascii_ReadWindow     (ESL_SQFILE *sqfp, int C, int W, ESL_SQ *sq);
2023-08-16T21:29:28,244          ^
2023-08-16T21:29:28,245   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1115:1: note: ‘sqascii_ReadWindow’ was previously declared here
2023-08-16T21:29:28,245    sqascii_ReadWindow(ESL_SQFILE *sqfp, int C, int W, ESL_SQ *sq)
2023-08-16T21:29:28,245    ^
2023-08-16T21:29:28,246   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:1115:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,246   pyhmmer/reexports/esl_sqio_ascii.h:25:7: warning: type of ‘sqascii_ReadSequence’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,246    int   sqascii_ReadSequence   (ESL_SQFILE *sqfp, ESL_SQ *sq);
2023-08-16T21:29:28,246          ^
2023-08-16T21:29:28,247   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:942:1: note: ‘sqascii_ReadSequence’ was previously declared here
2023-08-16T21:29:28,247    sqascii_ReadSequence(ESL_SQFILE *sqfp, ESL_SQ *sq)
2023-08-16T21:29:28,247    ^
2023-08-16T21:29:28,248   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:942:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,248   pyhmmer/reexports/esl_sqio_ascii.h:24:7: warning: type of ‘sqascii_ReadInfo’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,248    int   sqascii_ReadInfo       (ESL_SQFILE *sqfp, ESL_SQ *sq);
2023-08-16T21:29:28,249          ^
2023-08-16T21:29:28,249   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:838:1: note: ‘sqascii_ReadInfo’ was previously declared here
2023-08-16T21:29:28,249    sqascii_ReadInfo(ESL_SQFILE *sqfp, ESL_SQ *sq)
2023-08-16T21:29:28,250    ^
2023-08-16T21:29:28,250   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:838:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,250   pyhmmer/reexports/esl_sqio_ascii.h:23:7: warning: type of ‘sqascii_Read’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,251    int   sqascii_Read           (ESL_SQFILE *sqfp, ESL_SQ *sq);
2023-08-16T21:29:28,251          ^
2023-08-16T21:29:28,251   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:743:1: note: ‘sqascii_Read’ was previously declared here
2023-08-16T21:29:28,252    sqascii_Read(ESL_SQFILE *sqfp, ESL_SQ *sq)
2023-08-16T21:29:28,252    ^
2023-08-16T21:29:28,252   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:743:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,253   pyhmmer/reexports/esl_sqio_ascii.h:30:7: warning: type of ‘sqascii_IsRewindable’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,253    int   sqascii_IsRewindable   (const ESL_SQFILE *sqfp);
2023-08-16T21:29:28,253          ^
2023-08-16T21:29:28,254   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:697:1: note: ‘sqascii_IsRewindable’ was previously declared here
2023-08-16T21:29:28,254    sqascii_IsRewindable(const ESL_SQFILE *sqfp)
2023-08-16T21:29:28,254    ^
2023-08-16T21:29:28,255   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:697:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,255   pyhmmer/reexports/esl_sqio_ascii.h:22:7: warning: type of ‘sqascii_GuessAlphabet’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,255    int   sqascii_GuessAlphabet  (ESL_SQFILE *sqfp, int *ret_type);
2023-08-16T21:29:28,256          ^
2023-08-16T21:29:28,256   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:646:1: note: ‘sqascii_GuessAlphabet’ was previously declared here
2023-08-16T21:29:28,256    sqascii_GuessAlphabet(ESL_SQFILE *sqfp, int *ret_type)
2023-08-16T21:29:28,256    ^
2023-08-16T21:29:28,257   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:646:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,257   pyhmmer/reexports/esl_sqio_ascii.h:21:7: warning: type of ‘sqascii_SetDigital’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,257    int   sqascii_SetDigital     (ESL_SQFILE *sqfp, const ESL_ALPHABET *abc);
2023-08-16T21:29:28,258          ^
2023-08-16T21:29:28,258   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:591:1: note: ‘sqascii_SetDigital’ was previously declared here
2023-08-16T21:29:28,258    sqascii_SetDigital(ESL_SQFILE *sqfp, const ESL_ALPHABET *abc)
2023-08-16T21:29:28,259    ^
2023-08-16T21:29:28,259   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:591:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,259   pyhmmer/reexports/esl_sqio_ascii.h:20:7: warning: type of ‘sqascii_Close’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,259    void  sqascii_Close          (ESL_SQFILE *sqfp);
2023-08-16T21:29:28,260          ^
2023-08-16T21:29:28,260   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:531:1: note: ‘sqascii_Close’ was previously declared here
2023-08-16T21:29:28,260    sqascii_Close(ESL_SQFILE *sqfp)
2023-08-16T21:29:28,261    ^
2023-08-16T21:29:28,261   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:531:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,261   pyhmmer/reexports/esl_sqio_ascii.h:19:7: warning: type of ‘sqascii_Position’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:29:28,262    int   sqascii_Position       (ESL_SQFILE *sqfp, off_t offset);
2023-08-16T21:29:28,262          ^
2023-08-16T21:29:28,262   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:475:1: note: type mismatch in parameter 2
2023-08-16T21:29:28,263    sqascii_Position(ESL_SQFILE *sqfp, off_t offset)
2023-08-16T21:29:28,263    ^
2023-08-16T21:29:28,263   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:475:1: note: ‘sqascii_Position’ was previously declared here
2023-08-16T21:29:28,264   build/temp.linux-armv7l-cpython-37/esl_sqio_ascii.c:475:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:29:28,264   building 'pyhmmer.plan7' extension
2023-08-16T21:29:28,264   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -DHAS_PYINTERPRETERSTATE_GETID=1 -DeslENABLE_NEON=1 -DCYTHON_WITHOUT_ASSERTIONS=1 -Ibuild/temp.linux-armv7l-cpython-37 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ivendor/easel -I/usr/include/python3.7m -c pyhmmer/plan7.c -o build/temp.linux-armv7l-cpython-37/pyhmmer/plan7.o -mfpu=neon -Wno-unused-variable
2023-08-16T21:29:29,694   In file included from pyhmmer/plan7.c:1138:
2023-08-16T21:29:29,694   pyhmmer/fileobj/linux.h: In function ‘fileobj_linux_read’:
2023-08-16T21:29:29,695   pyhmmer/fileobj/linux.h:48:13: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:29:29,695        if (len > size) {
2023-08-16T21:29:29,695                ^
2023-08-16T21:29:36,769   pyhmmer/plan7.c: In function ‘__pyx_f_7pyhmmer_5plan7_21OptimizedProfileBlock__allocate’:
2023-08-16T21:29:36,788   pyhmmer/plan7.c:83458:66: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:29:36,788        for (__pyx_t_10 = __pyx_v_self->_block->listSize; __pyx_t_10 < __pyx_t_9; __pyx_t_10+=1) {
2023-08-16T21:29:36,789                                                                     ^
2023-08-16T21:29:38,692   pyhmmer/plan7.c: In function ‘__pyx_fuse_1__pyx_f_7pyhmmer_5plan7_8Pipeline_search_hmm’:
2023-08-16T21:29:38,714   pyhmmer/plan7.c:96721:27: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2023-08-16T21:29:38,715      __pyx_t_7 = (__pyx_t_10 > __pyx_v_7pyhmmer_5plan7_HMMER_TARGET_LIMIT);
2023-08-16T21:29:38,715                              ^
2023-08-16T21:41:05,758   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-armv7l-cpython-37/pyhmmer/plan7.o build/temp.linux-armv7l-cpython-37/libhmmer.a build/temp.linux-armv7l-cpython-37/libeasel.a build/temp.linux-armv7l-cpython-37/libdivsufsort.a -Lbuild/temp.linux-armv7l-cpython-37 -L/usr/lib -Lbuild/temp.linux-armv7l-cpython-37 -lhmmer -leasel -ldivsufsort -ldivsufsort -leasel -lhmmer -o build/lib.linux-armv7l-cpython-37/pyhmmer/plan7.cpython-37m-arm-linux-gnueabihf.so -mfpu=neon
2023-08-16T21:54:04,445   vendor/hmmer/src/hmmer.h:1590:16: warning: type of ‘p7_hmm_Compare’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,446    extern int     p7_hmm_Compare(P7_HMM *h1, P7_HMM *h2, float tol);
2023-08-16T21:54:04,447                   ^
2023-08-16T21:54:04,447   vendor/hmmer/src/p7_hmm.c:1184:1: note: ‘p7_hmm_Compare’ was previously declared here
2023-08-16T21:54:04,447    p7_hmm_Compare(P7_HMM *h1, P7_HMM *h2, float tol)
2023-08-16T21:54:04,448    ^
2023-08-16T21:54:04,448   vendor/hmmer/src/p7_hmm.c:1184:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,448   vendor/hmmer/src/hmmer.h:1572:16: warning: type of ‘p7_hmm_SetName’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,449    extern int     p7_hmm_SetName       (P7_HMM *hmm, char *name);
2023-08-16T21:54:04,449                   ^
2023-08-16T21:54:04,449   vendor/hmmer/src/p7_hmm.c:404:1: note: ‘p7_hmm_SetName’ was previously declared here
2023-08-16T21:54:04,450    p7_hmm_SetName(P7_HMM *hmm, char *name)
2023-08-16T21:54:04,450    ^
2023-08-16T21:54:04,450   vendor/hmmer/src/p7_hmm.c:404:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,451   vendor/hmmer/src/hmmer.h:1573:16: warning: type of ‘p7_hmm_SetAccession’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,451    extern int     p7_hmm_SetAccession  (P7_HMM *hmm, char *acc);
2023-08-16T21:54:04,451                   ^
2023-08-16T21:54:04,452   vendor/hmmer/src/p7_hmm.c:441:1: note: ‘p7_hmm_SetAccession’ was previously declared here
2023-08-16T21:54:04,452    p7_hmm_SetAccession(P7_HMM *hmm, char *acc)
2023-08-16T21:54:04,452    ^
2023-08-16T21:54:04,453   vendor/hmmer/src/p7_hmm.c:441:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,453   vendor/hmmer/src/hmmer.h:1574:16: warning: type of ‘p7_hmm_SetDescription’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,453    extern int     p7_hmm_SetDescription(P7_HMM *hmm, char *desc);
2023-08-16T21:54:04,453                   ^
2023-08-16T21:54:04,454   vendor/hmmer/src/p7_hmm.c:471:1: note: ‘p7_hmm_SetDescription’ was previously declared here
2023-08-16T21:54:04,454    p7_hmm_SetDescription(P7_HMM *hmm, char *desc)
2023-08-16T21:54:04,454    ^
2023-08-16T21:54:04,455   vendor/hmmer/src/p7_hmm.c:471:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,455   vendor/hmmer/src/impl_neon/impl_neon.h:290:21: warning: type of ‘p7_oprofile_Compare’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,455    extern int          p7_oprofile_Compare(const P7_OPROFILE *om1, const P7_OPROFILE *om2, float tol, char *errmsg);
2023-08-16T21:54:04,455                        ^
2023-08-16T21:54:04,456   vendor/hmmer/src/impl_neon/p7_oprofile.c:1806:1: note: ‘p7_oprofile_Compare’ was previously declared here
2023-08-16T21:54:04,456    p7_oprofile_Compare(const P7_OPROFILE *om1, const P7_OPROFILE *om2, float tol, char *errmsg)
2023-08-16T21:54:04,456    ^
2023-08-16T21:54:04,457   vendor/hmmer/src/impl_neon/p7_oprofile.c:1806:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,457   vendor/hmmer/src/impl_neon/impl_neon.h:270:21: warning: type of ‘p7_oprofile_IsLocal’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,457    extern int          p7_oprofile_IsLocal(const P7_OPROFILE *om);
2023-08-16T21:54:04,458                        ^
2023-08-16T21:54:04,458   vendor/hmmer/src/impl_neon/p7_oprofile.c:161:1: note: ‘p7_oprofile_IsLocal’ was previously declared here
2023-08-16T21:54:04,458    p7_oprofile_IsLocal(const P7_OPROFILE *om)
2023-08-16T21:54:04,458    ^
2023-08-16T21:54:04,459   vendor/hmmer/src/impl_neon/p7_oprofile.c:161:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,459   vendor/hmmer/src/hmmer.h:1681:20: warning: type of ‘p7_profile_Compare’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,459    extern int         p7_profile_Compare(P7_PROFILE *gm1, P7_PROFILE *gm2, float tol);
2023-08-16T21:54:04,460                       ^
2023-08-16T21:54:04,460   vendor/hmmer/src/p7_profile.c:552:1: note: ‘p7_profile_Compare’ was previously declared here
2023-08-16T21:54:04,460    p7_profile_Compare(P7_PROFILE *gm1, P7_PROFILE *gm2, float tol)
2023-08-16T21:54:04,460    ^
2023-08-16T21:54:04,461   vendor/hmmer/src/p7_profile.c:552:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,461   vendor/hmmer/src/hmmer.h:1426:12: warning: type of ‘p7_ReconfigLength’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,461    extern int p7_ReconfigLength  (P7_PROFILE *gm, int L);
2023-08-16T21:54:04,462               ^
2023-08-16T21:54:04,462   vendor/hmmer/src/modelconfig.c:221:1: note: ‘p7_ReconfigLength’ was previously declared here
2023-08-16T21:54:04,462    p7_ReconfigLength(P7_PROFILE *gm, int L)
2023-08-16T21:54:04,462    ^
2023-08-16T21:54:04,463   vendor/hmmer/src/modelconfig.c:221:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,463   vendor/hmmer/src/hmmer.h:1676:20: warning: type of ‘p7_profile_IsLocal’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,463    extern int         p7_profile_IsLocal(const P7_PROFILE *gm);
2023-08-16T21:54:04,464                       ^
2023-08-16T21:54:04,464   vendor/hmmer/src/p7_profile.c:335:1: note: ‘p7_profile_IsLocal’ was previously declared here
2023-08-16T21:54:04,464    p7_profile_IsLocal(const P7_PROFILE *gm)
2023-08-16T21:54:04,465    ^
2023-08-16T21:54:04,465   vendor/hmmer/src/p7_profile.c:335:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,465   vendor/hmmer/src/hmmer.h:1677:20: warning: type of ‘p7_profile_IsMultihit’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,466    extern int         p7_profile_IsMultihit(const P7_PROFILE *gm);
2023-08-16T21:54:04,466                       ^
2023-08-16T21:54:04,466   vendor/hmmer/src/p7_profile.c:347:1: note: ‘p7_profile_IsMultihit’ was previously declared here
2023-08-16T21:54:04,466    p7_profile_IsMultihit(const P7_PROFILE *gm)
2023-08-16T21:54:04,467    ^
2023-08-16T21:54:04,467   vendor/hmmer/src/p7_profile.c:347:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,467   vendor/hmmer/src/hmmer.h:1587:16: warning: type of ‘p7_hmm_SampleEnumerable’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,468    extern int     p7_hmm_SampleEnumerable(ESL_RANDOMNESS *r, int M, const ESL_ALPHABET *abc, P7_HMM **ret_hmm);
2023-08-16T21:54:04,468                   ^
2023-08-16T21:54:04,468   vendor/hmmer/src/p7_hmm.c:1051:1: note: ‘p7_hmm_SampleEnumerable’ was previously declared here
2023-08-16T21:54:04,468    p7_hmm_SampleEnumerable(ESL_RANDOMNESS *r, int M, const ESL_ALPHABET *abc, P7_HMM **ret_hmm)
2023-08-16T21:54:04,469    ^
2023-08-16T21:54:04,469   vendor/hmmer/src/p7_hmm.c:1051:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,469   vendor/hmmer/src/hmmer.h:1586:16: warning: type of ‘p7_hmm_SampleUngapped’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,470    extern int     p7_hmm_SampleUngapped  (ESL_RANDOMNESS *r, int M, const ESL_ALPHABET *abc, P7_HMM **ret_hmm);
2023-08-16T21:54:04,470                   ^
2023-08-16T21:54:04,470   vendor/hmmer/src/p7_hmm.c:1004:1: note: ‘p7_hmm_SampleUngapped’ was previously declared here
2023-08-16T21:54:04,470    p7_hmm_SampleUngapped(ESL_RANDOMNESS *r, int M, const ESL_ALPHABET *abc, P7_HMM **ret_hmm)
2023-08-16T21:54:04,471    ^
2023-08-16T21:54:04,471   vendor/hmmer/src/p7_hmm.c:1004:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,471   vendor/hmmer/src/hmmer.h:1585:16: warning: type of ‘p7_hmm_Sample’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,472    extern int     p7_hmm_Sample          (ESL_RANDOMNESS *r, int M, const ESL_ALPHABET *abc, P7_HMM **ret_hmm);
2023-08-16T21:54:04,472                   ^
2023-08-16T21:54:04,472   vendor/hmmer/src/p7_hmm.c:944:1: note: ‘p7_hmm_Sample’ was previously declared here
2023-08-16T21:54:04,472    p7_hmm_Sample(ESL_RANDOMNESS *r, int M, const ESL_ALPHABET *abc, P7_HMM **ret_hmm)
2023-08-16T21:54:04,473    ^
2023-08-16T21:54:04,473   vendor/hmmer/src/p7_hmm.c:944:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,473   vendor/hmmer/src/impl_neon/impl_neon.h:272:21: warning: type of ‘p7_oprofile_Sizeof’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,474    extern size_t       p7_oprofile_Sizeof(P7_OPROFILE *om);
2023-08-16T21:54:04,474                        ^
2023-08-16T21:54:04,474   vendor/hmmer/src/impl_neon/p7_oprofile.c:208:1: note: ‘p7_oprofile_Sizeof’ was previously declared here
2023-08-16T21:54:04,475    p7_oprofile_Sizeof(P7_OPROFILE *om)
2023-08-16T21:54:04,475    ^
2023-08-16T21:54:04,475   vendor/hmmer/src/impl_neon/p7_oprofile.c:208:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,475   vendor/hmmer/src/hmmer.h:1674:20: warning: type of ‘p7_profile_Sizeof’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,476    extern size_t      p7_profile_Sizeof(P7_PROFILE *gm);
2023-08-16T21:54:04,476                       ^
2023-08-16T21:54:04,476   vendor/hmmer/src/p7_profile.c:277:1: note: ‘p7_profile_Sizeof’ was previously declared here
2023-08-16T21:54:04,477    p7_profile_Sizeof(P7_PROFILE *gm)
2023-08-16T21:54:04,477    ^
2023-08-16T21:54:04,477   vendor/hmmer/src/p7_profile.c:277:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,477   vendor/hmmer/src/hmmer.h:1565:16: warning: type of ‘p7_hmm_Destroy’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,478    extern void    p7_hmm_Destroy(P7_HMM *hmm);
2023-08-16T21:54:04,478                   ^
2023-08-16T21:54:04,478   vendor/hmmer/src/p7_hmm.c:191:1: note: ‘p7_hmm_Destroy’ was previously declared here
2023-08-16T21:54:04,479    p7_hmm_Destroy(P7_HMM *hmm)
2023-08-16T21:54:04,479    ^
2023-08-16T21:54:04,479   vendor/hmmer/src/p7_hmm.c:191:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,479   vendor/hmmer/src/hmmer.h:1671:20: warning: type of ‘p7_profile_Copy’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,480    extern int         p7_profile_Copy(const P7_PROFILE *src, P7_PROFILE *dst);
2023-08-16T21:54:04,480                       ^
2023-08-16T21:54:04,480   vendor/hmmer/src/p7_profile.c:146:1: note: ‘p7_profile_Copy’ was previously declared here
2023-08-16T21:54:04,481    p7_profile_Copy(const P7_PROFILE *src, P7_PROFILE *dst)
2023-08-16T21:54:04,481    ^
2023-08-16T21:54:04,481   vendor/hmmer/src/p7_profile.c:146:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,481   vendor/hmmer/src/hmmer.h:1620:24: warning: type of ‘p7_hmm_ScoreDataCreate’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,482    extern P7_SCOREDATA   *p7_hmm_ScoreDataCreate(P7_OPROFILE *om, P7_PROFILE *gm );
2023-08-16T21:54:04,482                           ^
2023-08-16T21:54:04,482   vendor/hmmer/src/p7_scoredata.c:175:1: note: ‘p7_hmm_ScoreDataCreate’ was previously declared here
2023-08-16T21:54:04,483    p7_hmm_ScoreDataCreate(P7_OPROFILE *om, P7_PROFILE *gm )
2023-08-16T21:54:04,483    ^
2023-08-16T21:54:04,483   vendor/hmmer/src/p7_scoredata.c:175:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,483   vendor/hmmer/src/impl_neon/impl_neon.h:310:12: warning: type of ‘p7_oprofile_Write’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,484    extern int p7_oprofile_Write(FILE *ffp, FILE *pfp, P7_OPROFILE *om);
2023-08-16T21:54:04,484               ^
2023-08-16T21:54:04,484   vendor/hmmer/src/impl_neon/io.c:86:1: note: ‘p7_oprofile_Write’ was previously declared here
2023-08-16T21:54:04,485    p7_oprofile_Write(FILE *ffp, FILE *pfp, P7_OPROFILE *om)
2023-08-16T21:54:04,485    ^
2023-08-16T21:54:04,485   vendor/hmmer/src/impl_neon/io.c:86:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,485   vendor/hmmer/src/impl_neon/impl_neon.h:273:21: warning: type of ‘p7_oprofile_Copy’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,486    extern P7_OPROFILE *p7_oprofile_Copy(P7_OPROFILE *om);
2023-08-16T21:54:04,486                        ^
2023-08-16T21:54:04,486   vendor/hmmer/src/impl_neon/p7_oprofile.c:255:1: note: ‘p7_oprofile_Copy’ was previously declared here
2023-08-16T21:54:04,487    p7_oprofile_Copy(P7_OPROFILE *om1)
2023-08-16T21:54:04,487    ^
2023-08-16T21:54:04,487   vendor/hmmer/src/impl_neon/p7_oprofile.c:255:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,487   vendor/hmmer/src/hmmer.h:1608:13: warning: type of ‘p7_hmmfile_Read’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,488    extern int  p7_hmmfile_Read(P7_HMMFILE *hfp, ESL_ALPHABET **ret_abc,  P7_HMM **opt_hmm);
2023-08-16T21:54:04,488                ^
2023-08-16T21:54:04,488   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1131:1: note: ‘p7_hmmfile_Read’ was previously declared here
2023-08-16T21:54:04,489    p7_hmmfile_Read(P7_HMMFILE *hfp, ESL_ALPHABET **ret_abc,  P7_HMM **opt_hmm)
2023-08-16T21:54:04,489    ^
2023-08-16T21:54:04,489   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1131:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,490   vendor/hmmer/src/hmmer.h:1605:13: warning: type of ‘p7_hmmfile_WriteBinary’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,490    extern int  p7_hmmfile_WriteBinary(FILE *fp, int format, P7_HMM *hmm);
2023-08-16T21:54:04,490                ^
2023-08-16T21:54:04,490   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:981:1: note: ‘p7_hmmfile_WriteBinary’ was previously declared here
2023-08-16T21:54:04,491    p7_hmmfile_WriteBinary(FILE *fp, int format, P7_HMM *hmm)
2023-08-16T21:54:04,491    ^
2023-08-16T21:54:04,491   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:981:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,492   vendor/hmmer/src/hmmer.h:1606:13: warning: type of ‘p7_hmmfile_WriteASCII’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,492    extern int  p7_hmmfile_WriteASCII (FILE *fp, int format, P7_HMM *hmm);
2023-08-16T21:54:04,492                ^
2023-08-16T21:54:04,493   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:513:1: note: ‘p7_hmmfile_WriteASCII’ was previously declared here
2023-08-16T21:54:04,493    p7_hmmfile_WriteASCII(FILE *fp, int format, P7_HMM *hmm)
2023-08-16T21:54:04,493    ^
2023-08-16T21:54:04,493   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:513:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,494   vendor/hmmer/src/hmmer.h:1567:16: warning: type of ‘p7_hmm_Clone’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,494    extern P7_HMM *p7_hmm_Clone(const P7_HMM *hmm);
2023-08-16T21:54:04,494                   ^
2023-08-16T21:54:04,495   vendor/hmmer/src/p7_hmm.c:259:1: note: ‘p7_hmm_Clone’ was previously declared here
2023-08-16T21:54:04,495    p7_hmm_Clone(const P7_HMM *hmm)
2023-08-16T21:54:04,495    ^
2023-08-16T21:54:04,495   vendor/hmmer/src/p7_hmm.c:259:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,496   vendor/hmmer/src/hmmer.h:1514:12: warning: type of ‘p7_Builder’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,496    extern int p7_Builder      (P7_BUILDER *bld, ESL_MSA *msa, P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE ***opt_trarr, P7_PROFILE **opt_gm, P7_OPROFILE **opt_om, ESL_MSA **opt_postmsa);
2023-08-16T21:54:04,496               ^
2023-08-16T21:54:04,497   vendor/hmmer/src/p7_builder.c:415:1: note: ‘p7_Builder’ was previously declared here
2023-08-16T21:54:04,497    p7_Builder(P7_BUILDER *bld, ESL_MSA *msa, P7_BG *bg,
2023-08-16T21:54:04,497    ^
2023-08-16T21:54:04,497   vendor/hmmer/src/p7_builder.c:415:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,498   vendor/hmmer/src/hmmer.h:1515:12: warning: type of ‘p7_SingleBuilder’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,498    extern int p7_SingleBuilder(P7_BUILDER *bld, ESL_SQ *sq,   P7_BG *bg, P7_HMM **opt_hmm, P7_TRACE  **opt_tr,    P7_PROFILE **opt_gm, P7_OPROFILE **opt_om);
2023-08-16T21:54:04,498               ^
2023-08-16T21:54:04,499   vendor/hmmer/src/p7_builder.c:496:1: note: ‘p7_SingleBuilder’ was previously declared here
2023-08-16T21:54:04,499    p7_SingleBuilder(P7_BUILDER *bld, ESL_SQ *sq, P7_BG *bg, P7_HMM **opt_hmm,
2023-08-16T21:54:04,499    ^
2023-08-16T21:54:04,499   vendor/hmmer/src/p7_builder.c:496:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,500   vendor/hmmer/src/hmmer.h:1591:16: warning: type of ‘p7_hmm_Validate’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,500    extern int     p7_hmm_Validate(P7_HMM *hmm, char *errbuf, float tol);
2023-08-16T21:54:04,500                   ^
2023-08-16T21:54:04,501   vendor/hmmer/src/p7_hmm.c:1253:1: note: ‘p7_hmm_Validate’ was previously declared here
2023-08-16T21:54:04,501    p7_hmm_Validate(P7_HMM *hmm, char *errbuf, float tol)
2023-08-16T21:54:04,501    ^
2023-08-16T21:54:04,501   vendor/hmmer/src/p7_hmm.c:1253:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,502   vendor/hmmer/src/hmmer.h:1728:12: warning: type of ‘p7_tophits_Alignment’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,502    extern int p7_tophits_Alignment(const P7_TOPHITS *th, const ESL_ALPHABET *abc,
2023-08-16T21:54:04,502               ^
2023-08-16T21:54:04,503   vendor/hmmer/src/p7_tophits.c:1509:1: note: ‘p7_tophits_Alignment’ was previously declared here
2023-08-16T21:54:04,503    p7_tophits_Alignment(const P7_TOPHITS *th, const ESL_ALPHABET *abc,
2023-08-16T21:54:04,503    ^
2023-08-16T21:54:04,503   vendor/hmmer/src/p7_tophits.c:1509:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,504   vendor/hmmer/src/hmmer.h:1581:16: warning: type of ‘p7_hmm_ScaleExponential’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,504    extern int     p7_hmm_ScaleExponential(P7_HMM *hmm, double exp);
2023-08-16T21:54:04,504                   ^
2023-08-16T21:54:04,505   vendor/hmmer/src/p7_hmm.c:821:1: note: ‘p7_hmm_ScaleExponential’ was previously declared here
2023-08-16T21:54:04,505    p7_hmm_ScaleExponential(P7_HMM *hmm, double exp)
2023-08-16T21:54:04,505    ^
2023-08-16T21:54:04,505   vendor/hmmer/src/p7_hmm.c:821:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,506   vendor/hmmer/src/hmmer.h:1580:16: warning: type of ‘p7_hmm_Scale’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,506    extern int     p7_hmm_Scale      (P7_HMM *hmm, double scale);
2023-08-16T21:54:04,506                   ^
2023-08-16T21:54:04,507   vendor/hmmer/src/p7_hmm.c:757:1: note: ‘p7_hmm_Scale’ was previously declared here
2023-08-16T21:54:04,507    p7_hmm_Scale(P7_HMM *hmm, double scale)
2023-08-16T21:54:04,507    ^
2023-08-16T21:54:04,507   vendor/hmmer/src/p7_hmm.c:757:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,508   vendor/hmmer/src/hmmer.h:1562:16: warning: type of ‘p7_hmm_Create’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,508    extern P7_HMM *p7_hmm_Create(int M, const ESL_ALPHABET *abc);
2023-08-16T21:54:04,508                   ^
2023-08-16T21:54:04,509   vendor/hmmer/src/p7_hmm.c:50:1: note: ‘p7_hmm_Create’ was previously declared here
2023-08-16T21:54:04,509    p7_hmm_Create(int M, const ESL_ALPHABET *abc)
2023-08-16T21:54:04,509    ^
2023-08-16T21:54:04,509   vendor/hmmer/src/p7_hmm.c:50:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,510   vendor/hmmer/src/hmmer.h:1578:16: warning: type of ‘p7_hmm_SetConsensus’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,510    extern int     p7_hmm_SetConsensus  (P7_HMM *hmm, ESL_SQ *sq);
2023-08-16T21:54:04,510                   ^
2023-08-16T21:54:04,510   vendor/hmmer/src/p7_hmm.c:702:1: note: ‘p7_hmm_SetConsensus’ was previously declared here
2023-08-16T21:54:04,511    p7_hmm_SetConsensus(P7_HMM *hmm, ESL_SQ *sq)
2023-08-16T21:54:04,511    ^
2023-08-16T21:54:04,511   vendor/hmmer/src/p7_hmm.c:702:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,512   vendor/hmmer/src/hmmer.h:1675:20: warning: type of ‘p7_profile_Destroy’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,512    extern void        p7_profile_Destroy(P7_PROFILE *gm);
2023-08-16T21:54:04,512                       ^
2023-08-16T21:54:04,512   vendor/hmmer/src/p7_profile.c:306:1: note: ‘p7_profile_Destroy’ was previously declared here
2023-08-16T21:54:04,513    p7_profile_Destroy(P7_PROFILE *gm)
2023-08-16T21:54:04,513    ^
2023-08-16T21:54:04,514   vendor/hmmer/src/p7_profile.c:306:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,514   vendor/hmmer/src/hmmer.h:1669:20: warning: type of ‘p7_profile_Create’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,514    extern P7_PROFILE *p7_profile_Create(int M, const ESL_ALPHABET *abc);
2023-08-16T21:54:04,514                       ^
2023-08-16T21:54:04,515   vendor/hmmer/src/p7_profile.c:52:1: note: ‘p7_profile_Create’ was previously declared here
2023-08-16T21:54:04,515    p7_profile_Create(int allocM, const ESL_ALPHABET *abc)
2023-08-16T21:54:04,515    ^
2023-08-16T21:54:04,516   vendor/hmmer/src/p7_profile.c:52:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,516   vendor/hmmer/src/impl_neon/impl_neon.h:269:21: warning: type of ‘p7_oprofile_Create’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,516    extern P7_OPROFILE *p7_oprofile_Create(int M, const ESL_ALPHABET *abc);
2023-08-16T21:54:04,516                        ^
2023-08-16T21:54:04,517   vendor/hmmer/src/impl_neon/p7_oprofile.c:48:1: note: ‘p7_oprofile_Create’ was previously declared here
2023-08-16T21:54:04,517    p7_oprofile_Create(int allocM, const ESL_ALPHABET *abc)
2023-08-16T21:54:04,517    ^
2023-08-16T21:54:04,517   vendor/hmmer/src/impl_neon/p7_oprofile.c:48:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,518   vendor/hmmer/src/hmmer.h:1425:12: warning: type of ‘p7_ProfileConfig’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,518    extern int p7_ProfileConfig(const P7_HMM *hmm, const P7_BG *bg, P7_PROFILE *gm, int L, int mode);
2023-08-16T21:54:04,518               ^
2023-08-16T21:54:04,519   vendor/hmmer/src/modelconfig.c:48:1: note: ‘p7_ProfileConfig’ was previously declared here
2023-08-16T21:54:04,519    p7_ProfileConfig(const P7_HMM *hmm, const P7_BG *bg, P7_PROFILE *gm, int L, int mode)
2023-08-16T21:54:04,519    ^
2023-08-16T21:54:04,519   vendor/hmmer/src/modelconfig.c:48:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,520   vendor/hmmer/src/hmmer.h:1465:12: warning: type of ‘p7_tracealign_Seqs’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,520    extern int p7_tracealign_Seqs(ESL_SQ **sq,           P7_TRACE **tr, int nseq, int M,  int optflags, P7_HMM *hmm, ESL_MSA **ret_msa);
2023-08-16T21:54:04,520               ^
2023-08-16T21:54:04,521   vendor/hmmer/src/tracealign.c:97:1: note: ‘p7_tracealign_Seqs’ was previously declared here
2023-08-16T21:54:04,521    p7_tracealign_Seqs(ESL_SQ **sq, P7_TRACE **tr, int nseq, int M, int optflags, P7_HMM *hmm, ESL_MSA **ret_msa)
2023-08-16T21:54:04,521    ^
2023-08-16T21:54:04,522   vendor/hmmer/src/tracealign.c:97:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,522   vendor/hmmer/src/hmmer.h:1593:16: warning: type of ‘p7_hmm_CalculateOccupancy’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,522    extern int     p7_hmm_CalculateOccupancy(const P7_HMM *hmm, float *mocc, float *iocc);
2023-08-16T21:54:04,522                   ^
2023-08-16T21:54:04,523   vendor/hmmer/src/p7_hmm.c:1338:1: note: ‘p7_hmm_CalculateOccupancy’ was previously declared here
2023-08-16T21:54:04,523    p7_hmm_CalculateOccupancy(const P7_HMM *hmm, float *mocc, float *iocc)
2023-08-16T21:54:04,523    ^
2023-08-16T21:54:04,524   vendor/hmmer/src/p7_hmm.c:1338:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,524   vendor/hmmer/src/hmmer.h:1582:16: warning: type of ‘p7_hmm_Renormalize’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,524    extern int     p7_hmm_Renormalize(P7_HMM *hmm);
2023-08-16T21:54:04,524                   ^
2023-08-16T21:54:04,525   vendor/hmmer/src/p7_hmm.c:856:1: note: ‘p7_hmm_Renormalize’ was previously declared here
2023-08-16T21:54:04,525    p7_hmm_Renormalize(P7_HMM *hmm)
2023-08-16T21:54:04,525    ^
2023-08-16T21:54:04,526   vendor/hmmer/src/p7_hmm.c:856:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,526   vendor/hmmer/src/hmmer.h:1577:16: warning: type of ‘p7_hmm_SetComposition’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,526    extern int     p7_hmm_SetComposition(P7_HMM *hmm);
2023-08-16T21:54:04,526                   ^
2023-08-16T21:54:04,527   vendor/hmmer/src/p7_hmm.c:625:1: note: ‘p7_hmm_SetComposition’ was previously declared here
2023-08-16T21:54:04,527    p7_hmm_SetComposition(P7_HMM *hmm)
2023-08-16T21:54:04,527    ^
2023-08-16T21:54:04,528   vendor/hmmer/src/p7_hmm.c:625:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,528   vendor/hmmer/src/hmmer.h:1610:13: warning: type of ‘p7_hmmfile_Position’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,528    extern int  p7_hmmfile_Position(P7_HMMFILE *hfp, const off_t offset);
2023-08-16T21:54:04,528                ^
2023-08-16T21:54:04,529   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1191:1: note: type mismatch in parameter 2
2023-08-16T21:54:04,529    p7_hmmfile_Position(P7_HMMFILE *hfp, const off_t offset)
2023-08-16T21:54:04,529    ^
2023-08-16T21:54:04,530   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1191:1: note: ‘p7_hmmfile_Position’ was previously declared here
2023-08-16T21:54:04,530   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1191:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,530   vendor/hmmer/src/impl_neon/impl_neon.h:280:21: warning: type of ‘p7_oprofile_Convert’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,530    extern int          p7_oprofile_Convert(const P7_PROFILE *gm, P7_OPROFILE *om);
2023-08-16T21:54:04,531                        ^
2023-08-16T21:54:04,531   vendor/hmmer/src/impl_neon/p7_oprofile.c:1020:2: note: ‘p7_oprofile_Convert’ was previously declared here
2023-08-16T21:54:04,531     p7_oprofile_Convert(const P7_PROFILE *gm, P7_OPROFILE *om)
2023-08-16T21:54:04,532     ^
2023-08-16T21:54:04,532   vendor/hmmer/src/impl_neon/p7_oprofile.c:1020:2: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,532   vendor/easel/esl_sqio.h:131:14: warning: type of ‘esl_sqio_Read’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,532    extern int   esl_sqio_Read        (ESL_SQFILE *sqfp, ESL_SQ *sq);
2023-08-16T21:54:04,533                 ^
2023-08-16T21:54:04,533   vendor/easel/esl_sqio.c:356:1: note: ‘esl_sqio_Read’ was previously declared here
2023-08-16T21:54:04,533    esl_sqio_Read(ESL_SQFILE *sqfp, ESL_SQ *sq)
2023-08-16T21:54:04,534    ^
2023-08-16T21:54:04,534   vendor/easel/esl_sqio.c:356:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,534   vendor/hmmer/src/impl_neon/impl_neon.h:311:12: warning: type of ‘p7_oprofile_ReadMSV’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,534    extern int p7_oprofile_ReadMSV (P7_HMMFILE *hfp, ESL_ALPHABET **byp_abc, P7_OPROFILE **ret_om);
2023-08-16T21:54:04,535               ^
2023-08-16T21:54:04,535   vendor/hmmer/src/impl_neon/io.c:230:1: note: ‘p7_oprofile_ReadMSV’ was previously declared here
2023-08-16T21:54:04,535    p7_oprofile_ReadMSV(P7_HMMFILE *hfp, ESL_ALPHABET **byp_abc, P7_OPROFILE **ret_om)
2023-08-16T21:54:04,535    ^
2023-08-16T21:54:04,536   vendor/hmmer/src/impl_neon/io.c:230:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,536   vendor/hmmer/src/impl_neon/impl_neon.h:314:12: warning: type of ‘p7_oprofile_ReadRest’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,536    extern int p7_oprofile_ReadRest(P7_HMMFILE *hfp, P7_OPROFILE *om);
2023-08-16T21:54:04,537               ^
2023-08-16T21:54:04,537   vendor/hmmer/src/impl_neon/io.c:488:1: note: ‘p7_oprofile_ReadRest’ was previously declared here
2023-08-16T21:54:04,537    p7_oprofile_ReadRest(P7_HMMFILE *hfp, P7_OPROFILE *om)
2023-08-16T21:54:04,538    ^
2023-08-16T21:54:04,538   vendor/hmmer/src/impl_neon/io.c:488:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,538   vendor/hmmer/src/impl_neon/impl_neon.h:271:21: warning: type of ‘p7_oprofile_Destroy’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,538    extern void         p7_oprofile_Destroy(P7_OPROFILE *om);
2023-08-16T21:54:04,539                        ^
2023-08-16T21:54:04,539   vendor/hmmer/src/impl_neon/p7_oprofile.c:172:1: note: ‘p7_oprofile_Destroy’ was previously declared here
2023-08-16T21:54:04,539    p7_oprofile_Destroy(P7_OPROFILE *om)
2023-08-16T21:54:04,540    ^
2023-08-16T21:54:04,540   vendor/hmmer/src/impl_neon/p7_oprofile.c:172:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,540   vendor/hmmer/src/impl_neon/impl_neon.h:281:21: warning: type of ‘p7_oprofile_ReconfigLength’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,540    extern int          p7_oprofile_ReconfigLength    (P7_OPROFILE *om, int L);
2023-08-16T21:54:04,541                        ^
2023-08-16T21:54:04,541   vendor/hmmer/src/impl_neon/p7_oprofile.c:1077:1: note: ‘p7_oprofile_ReconfigLength’ was previously declared here
2023-08-16T21:54:04,541    p7_oprofile_ReconfigLength(P7_OPROFILE *om, int L)
2023-08-16T21:54:04,542    ^
2023-08-16T21:54:04,542   vendor/hmmer/src/impl_neon/p7_oprofile.c:1077:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,542   vendor/hmmer/src/hmmer.h:1648:12: warning: type of ‘p7_Pipeline’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,542    extern int p7_Pipeline              (P7_PIPELINE *pli, P7_OPROFILE *om, P7_BG *bg, const ESL_SQ *sq, const ESL_SQ *ntsq, P7_TOPHITS *th);
2023-08-16T21:54:04,543               ^
2023-08-16T21:54:04,543   vendor/hmmer/src/p7_pipeline.c:697:1: note: ‘p7_Pipeline’ was previously declared here
2023-08-16T21:54:04,543    p7_Pipeline(P7_PIPELINE *pli, P7_OPROFILE *om, P7_BG *bg, const ESL_SQ *sq, const ESL_SQ *ntsq, P7_TOPHITS *hitlist)
2023-08-16T21:54:04,544    ^
2023-08-16T21:54:04,544   vendor/hmmer/src/p7_pipeline.c:697:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,544   vendor/easel/esl_sq.h:161:16: warning: type of ‘esl_sq_Copy’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,544    extern int     esl_sq_Copy(const ESL_SQ *src, ESL_SQ *dst);
2023-08-16T21:54:04,545                   ^
2023-08-16T21:54:04,545   vendor/easel/esl_sq.c:265:1: note: ‘esl_sq_Copy’ was previously declared here
2023-08-16T21:54:04,546    esl_sq_Copy(const ESL_SQ *src, ESL_SQ *dst)
2023-08-16T21:54:04,546    ^
2023-08-16T21:54:04,546   vendor/easel/esl_sq.c:265:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,546   vendor/easel/esl_sqio.h:133:14: warning: type of ‘esl_sqio_ReadWindow’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,547    extern int   esl_sqio_ReadWindow  (ESL_SQFILE *sqfp, int C, int W, ESL_SQ *sq);
2023-08-16T21:54:04,547                 ^
2023-08-16T21:54:04,548   vendor/easel/esl_sqio.c:500:1: note: ‘esl_sqio_ReadWindow’ was previously declared here
2023-08-16T21:54:04,548    esl_sqio_ReadWindow(ESL_SQFILE *sqfp, int C, int W, ESL_SQ *sq)
2023-08-16T21:54:04,549    ^
2023-08-16T21:54:04,549   vendor/easel/esl_sqio.c:500:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,550   vendor/hmmer/src/hmmer.h:1645:12: warning: type of ‘p7_pli_NewModel’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,550    extern int p7_pli_NewModel          (P7_PIPELINE *pli, const P7_OPROFILE *om, P7_BG *bg);
2023-08-16T21:54:04,551               ^
2023-08-16T21:54:04,551   vendor/hmmer/src/p7_pipeline.c:492:1: note: ‘p7_pli_NewModel’ was previously declared here
2023-08-16T21:54:04,551    p7_pli_NewModel(P7_PIPELINE *pli, const P7_OPROFILE *om, P7_BG *bg)
2023-08-16T21:54:04,552    ^
2023-08-16T21:54:04,552   vendor/hmmer/src/p7_pipeline.c:492:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,553   vendor/easel/esl_sq.h:183:16: warning: type of ‘esl_sq_CreateDigital’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,553    extern ESL_SQ *esl_sq_CreateDigital(const ESL_ALPHABET *abc);
2023-08-16T21:54:04,553                   ^
2023-08-16T21:54:04,554   vendor/easel/esl_sq.c:730:1: note: ‘esl_sq_CreateDigital’ was previously declared here
2023-08-16T21:54:04,554    esl_sq_CreateDigital(const ESL_ALPHABET *abc)
2023-08-16T21:54:04,554    ^
2023-08-16T21:54:04,555   vendor/easel/esl_sq.c:730:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,555   vendor/easel/esl_sq.h:169:16: warning: type of ‘esl_sq_SetAccession’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,555    extern int     esl_sq_SetAccession   (ESL_SQ *sq, const char *acc);
2023-08-16T21:54:04,555                   ^
2023-08-16T21:54:04,556   vendor/easel/esl_sq.c:1087:1: note: ‘esl_sq_SetAccession’ was previously declared here
2023-08-16T21:54:04,556    esl_sq_SetAccession(ESL_SQ *sq, const char *acc)
2023-08-16T21:54:04,556    ^
2023-08-16T21:54:04,557   vendor/easel/esl_sq.c:1087:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,557   vendor/easel/esl_sq.h:168:16: warning: type of ‘esl_sq_SetName’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,557    extern int     esl_sq_SetName        (ESL_SQ *sq, const char *name);
2023-08-16T21:54:04,558                   ^
2023-08-16T21:54:04,558   vendor/easel/esl_sq.c:1049:1: note: ‘esl_sq_SetName’ was previously declared here
2023-08-16T21:54:04,558    esl_sq_SetName(ESL_SQ *sq, const char *name)
2023-08-16T21:54:04,558    ^
2023-08-16T21:54:04,559   vendor/easel/esl_sq.c:1049:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,559   vendor/easel/esl_sq.h:170:16: warning: type of ‘esl_sq_SetDesc’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,559    extern int     esl_sq_SetDesc        (ESL_SQ *sq, const char *desc);
2023-08-16T21:54:04,560                   ^
2023-08-16T21:54:04,560   vendor/easel/esl_sq.c:1127:1: note: ‘esl_sq_SetDesc’ was previously declared here
2023-08-16T21:54:04,560    esl_sq_SetDesc(ESL_SQ *sq, const char *desc)
2023-08-16T21:54:04,561    ^
2023-08-16T21:54:04,561   vendor/easel/esl_sq.c:1127:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,561   vendor/easel/esl_sq.h:171:16: warning: type of ‘esl_sq_SetSource’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,561    extern int     esl_sq_SetSource      (ESL_SQ *sq, const char *source);
2023-08-16T21:54:04,562                   ^
2023-08-16T21:54:04,562   vendor/easel/esl_sq.c:1165:1: note: ‘esl_sq_SetSource’ was previously declared here
2023-08-16T21:54:04,562    esl_sq_SetSource(ESL_SQ *sq, const char *source)
2023-08-16T21:54:04,563    ^
2023-08-16T21:54:04,563   vendor/easel/esl_sq.c:1165:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,564   vendor/easel/esl_sq.h:160:16: warning: type of ‘esl_sq_GrowTo’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,564    extern int     esl_sq_GrowTo(ESL_SQ *sq, int64_t  n);
2023-08-16T21:54:04,564                   ^
2023-08-16T21:54:04,564   vendor/easel/esl_sq.c:209:1: note: ‘esl_sq_GrowTo’ was previously declared here
2023-08-16T21:54:04,565    esl_sq_GrowTo(ESL_SQ *sq, int64_t n)
2023-08-16T21:54:04,565    ^
2023-08-16T21:54:04,566   vendor/easel/esl_sq.c:209:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,566   vendor/hmmer/src/hmmer.h:1647:12: warning: type of ‘p7_pli_NewSeq’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,566    extern int p7_pli_NewSeq            (P7_PIPELINE *pli, const ESL_SQ *sq);
2023-08-16T21:54:04,567               ^
2023-08-16T21:54:04,567   vendor/hmmer/src/p7_pipeline.c:576:1: note: ‘p7_pli_NewSeq’ was previously declared here
2023-08-16T21:54:04,567    p7_pli_NewSeq(P7_PIPELINE *pli, const ESL_SQ *sq)
2023-08-16T21:54:04,568    ^
2023-08-16T21:54:04,568   vendor/hmmer/src/p7_pipeline.c:576:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,568   vendor/easel/esl_sq.h:179:16: warning: type of ‘esl_sq_ReverseComplement’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,569    extern int     esl_sq_ReverseComplement(ESL_SQ *sq);
2023-08-16T21:54:04,569                   ^
2023-08-16T21:54:04,569   vendor/easel/esl_sq.c:1536:1: note: ‘esl_sq_ReverseComplement’ was previously declared here
2023-08-16T21:54:04,570    esl_sq_ReverseComplement(ESL_SQ *sq)
2023-08-16T21:54:04,570    ^
2023-08-16T21:54:04,570   vendor/easel/esl_sq.c:1536:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,571   vendor/hmmer/src/hmmer.h:1649:12: warning: type of ‘p7_Pipeline_LongTarget’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,571    extern int p7_Pipeline_LongTarget   (P7_PIPELINE *pli, P7_OPROFILE *om, P7_SCOREDATA *data,
2023-08-16T21:54:04,571               ^
2023-08-16T21:54:04,572   vendor/hmmer/src/p7_pipeline.c:1496:1: note: ‘p7_Pipeline_LongTarget’ was previously declared here
2023-08-16T21:54:04,572    p7_Pipeline_LongTarget(P7_PIPELINE *pli, P7_OPROFILE *om, P7_SCOREDATA *data,
2023-08-16T21:54:04,572    ^
2023-08-16T21:54:04,573   vendor/hmmer/src/p7_pipeline.c:1496:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,573   vendor/easel/esl_sq.h:163:16: warning: type of ‘esl_sq_Reuse’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,573    extern int     esl_sq_Reuse    (ESL_SQ *sq);
2023-08-16T21:54:04,573                   ^
2023-08-16T21:54:04,574   vendor/easel/esl_sq.c:443:1: note: ‘esl_sq_Reuse’ was previously declared here
2023-08-16T21:54:04,574    esl_sq_Reuse(ESL_SQ *sq)
2023-08-16T21:54:04,574    ^
2023-08-16T21:54:04,575   vendor/easel/esl_sq.c:443:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,575   vendor/easel/esl_sq.h:166:16: warning: type of ‘esl_sq_Destroy’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,575    extern void    esl_sq_Destroy  (ESL_SQ *sq);
2023-08-16T21:54:04,575                   ^
2023-08-16T21:54:04,576   vendor/easel/esl_sq.c:550:1: note: ‘esl_sq_Destroy’ was previously declared here
2023-08-16T21:54:04,576    esl_sq_Destroy(ESL_SQ *sq)
2023-08-16T21:54:04,576    ^
2023-08-16T21:54:04,577   vendor/easel/esl_sq.c:550:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,577   vendor/hmmer/src/hmmer.h:1673:20: warning: type of ‘p7_profile_Reuse’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,577    extern int         p7_profile_Reuse(P7_PROFILE *gm);
2023-08-16T21:54:04,578                       ^
2023-08-16T21:54:04,578   vendor/hmmer/src/p7_profile.c:242:1: note: ‘p7_profile_Reuse’ was previously declared here
2023-08-16T21:54:04,578    p7_profile_Reuse(P7_PROFILE *gm)
2023-08-16T21:54:04,578    ^
2023-08-16T21:54:04,579   vendor/hmmer/src/p7_profile.c:242:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,579   vendor/hmmer/src/hmmer.h:1467:12: warning: type of ‘p7_tracealign_computeTraces’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,579    extern int p7_tracealign_computeTraces(P7_HMM *hmm, ESL_SQ  **sq, int offset, int N, P7_TRACE  **tr);
2023-08-16T21:54:04,580               ^
2023-08-16T21:54:04,580   vendor/hmmer/src/tracealign.c:236:1: note: ‘p7_tracealign_computeTraces’ was previously declared here
2023-08-16T21:54:04,581    p7_tracealign_computeTraces(P7_HMM *hmm, ESL_SQ  **sq, int offset, int N, P7_TRACE  **tr)
2023-08-16T21:54:04,581    ^
2023-08-16T21:54:04,581   vendor/hmmer/src/tracealign.c:236:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,582   vendor/hmmer/src/impl_neon/impl_neon.h:284:21: warning: type of ‘p7_oprofile_ReconfigMultihit’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,582    extern int          p7_oprofile_ReconfigMultihit  (P7_OPROFILE *om, int L);
2023-08-16T21:54:04,582                        ^
2023-08-16T21:54:04,583   vendor/hmmer/src/impl_neon/p7_oprofile.c:1166:1: note: ‘p7_oprofile_ReconfigMultihit’ was previously declared here
2023-08-16T21:54:04,583    p7_oprofile_ReconfigMultihit(P7_OPROFILE *om, int L)
2023-08-16T21:54:04,583    ^
2023-08-16T21:54:04,584   vendor/hmmer/src/impl_neon/p7_oprofile.c:1166:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,584   vendor/hmmer/src/impl_neon/impl_neon.h:285:21: warning: type of ‘p7_oprofile_ReconfigUnihit’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,584    extern int          p7_oprofile_ReconfigUnihit    (P7_OPROFILE *om, int L);
2023-08-16T21:54:04,585                        ^
2023-08-16T21:54:04,585   vendor/hmmer/src/impl_neon/p7_oprofile.c:1191:1: note: ‘p7_oprofile_ReconfigUnihit’ was previously declared here
2023-08-16T21:54:04,585    p7_oprofile_ReconfigUnihit(P7_OPROFILE *om, int L)
2023-08-16T21:54:04,585    ^
2023-08-16T21:54:04,586   vendor/hmmer/src/impl_neon/p7_oprofile.c:1191:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,586   vendor/hmmer/src/hmmer.h:1427:12: warning: type of ‘p7_ReconfigMultihit’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,587    extern int p7_ReconfigMultihit(P7_PROFILE *gm, int L);
2023-08-16T21:54:04,587               ^
2023-08-16T21:54:04,587   vendor/hmmer/src/modelconfig.c:256:1: note: ‘p7_ReconfigMultihit’ was previously declared here
2023-08-16T21:54:04,587    p7_ReconfigMultihit(P7_PROFILE *gm, int L)
2023-08-16T21:54:04,588    ^
2023-08-16T21:54:04,588   vendor/hmmer/src/modelconfig.c:256:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,589   vendor/hmmer/src/hmmer.h:1428:12: warning: type of ‘p7_ReconfigUnihit’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,589    extern int p7_ReconfigUnihit  (P7_PROFILE *gm, int L);
2023-08-16T21:54:04,590               ^
2023-08-16T21:54:04,590   vendor/hmmer/src/modelconfig.c:276:1: note: ‘p7_ReconfigUnihit’ was previously declared here
2023-08-16T21:54:04,590    p7_ReconfigUnihit(P7_PROFILE *gm, int L)
2023-08-16T21:54:04,591    ^
2023-08-16T21:54:04,591   vendor/hmmer/src/modelconfig.c:276:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,592   vendor/hmmer/src/hmmer.h:1432:15: warning: type of ‘p7_MeanMatchEntropy’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,592    extern double p7_MeanMatchEntropy        (const P7_HMM *hmm);
2023-08-16T21:54:04,592                  ^
2023-08-16T21:54:04,593   vendor/hmmer/src/modelstats.c:53:1: note: ‘p7_MeanMatchEntropy’ was previously declared here
2023-08-16T21:54:04,593    p7_MeanMatchEntropy(const P7_HMM *hmm)
2023-08-16T21:54:04,593    ^
2023-08-16T21:54:04,593   vendor/hmmer/src/modelstats.c:53:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,594   vendor/hmmer/src/hmmer.h:1431:15: warning: type of ‘p7_MeanMatchInfo’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,594    extern double p7_MeanMatchInfo           (const P7_HMM *hmm, const P7_BG *bg);
2023-08-16T21:54:04,594                  ^
2023-08-16T21:54:04,595   vendor/hmmer/src/modelstats.c:34:1: note: ‘p7_MeanMatchInfo’ was previously declared here
2023-08-16T21:54:04,595    p7_MeanMatchInfo(const P7_HMM *hmm, const P7_BG *bg)
2023-08-16T21:54:04,595    ^
2023-08-16T21:54:04,596   vendor/hmmer/src/modelstats.c:34:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,596   vendor/hmmer/src/hmmer.h:1433:15: warning: type of ‘p7_MeanMatchRelativeEntropy’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,596    extern double p7_MeanMatchRelativeEntropy(const P7_HMM *hmm, const P7_BG *bg);
2023-08-16T21:54:04,597                  ^
2023-08-16T21:54:04,597   vendor/hmmer/src/modelstats.c:80:1: note: ‘p7_MeanMatchRelativeEntropy’ was previously declared here
2023-08-16T21:54:04,597    p7_MeanMatchRelativeEntropy(const P7_HMM *hmm, const P7_BG *bg)
2023-08-16T21:54:04,598    ^
2023-08-16T21:54:04,598   vendor/hmmer/src/modelstats.c:80:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,598   vendor/hmmer/src/hmmer.h:1568:16: warning: type of ‘p7_hmm_Zero’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,599    extern int     p7_hmm_Zero(P7_HMM *hmm);
2023-08-16T21:54:04,599                   ^
2023-08-16T21:54:04,599   vendor/hmmer/src/p7_hmm.c:313:1: note: ‘p7_hmm_Zero’ was previously declared here
2023-08-16T21:54:04,599    p7_hmm_Zero(P7_HMM *hmm)
2023-08-16T21:54:04,600    ^
2023-08-16T21:54:04,600   vendor/hmmer/src/p7_hmm.c:313:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,600   pyhmmer/reexports/p7_hmmfile.h:10:12: warning: type of ‘read_asc20hmm’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,601    extern int read_asc20hmm(P7_HMMFILE* hfp, ESL_ALPHABET** ret_abc, P7_HMM** opt_hmm);
2023-08-16T21:54:04,601               ^
2023-08-16T21:54:04,601   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1707:1: note: ‘read_asc20hmm’ was previously declared here
2023-08-16T21:54:04,602    read_asc20hmm(P7_HMMFILE *hfp, ESL_ALPHABET **ret_abc, P7_HMM **opt_hmm)
2023-08-16T21:54:04,602    ^
2023-08-16T21:54:04,602   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1707:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,603   pyhmmer/reexports/p7_hmmfile.h:11:12: warning: type of ‘read_asc30hmm’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,603    extern int read_asc30hmm(P7_HMMFILE* hfp, ESL_ALPHABET** ret_abc, P7_HMM** opt_hmm);
2023-08-16T21:54:04,603               ^
2023-08-16T21:54:04,604   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1245:1: note: ‘read_asc30hmm’ was previously declared here
2023-08-16T21:54:04,604    read_asc30hmm(P7_HMMFILE *hfp, ESL_ALPHABET **ret_abc, P7_HMM **opt_hmm)
2023-08-16T21:54:04,604    ^
2023-08-16T21:54:04,604   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1245:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,605   pyhmmer/reexports/p7_hmmfile.h:12:12: warning: type of ‘read_bin30hmm’ does not match original declaration [-Wlto-type-mismatch]
2023-08-16T21:54:04,605    extern int read_bin30hmm(P7_HMMFILE* hfp, ESL_ALPHABET** ret_abc, P7_HMM** opt_hmm);
2023-08-16T21:54:04,605               ^
2023-08-16T21:54:04,606   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1585:1: note: ‘read_bin30hmm’ was previously declared here
2023-08-16T21:54:04,606    read_bin30hmm(P7_HMMFILE *hfp, ESL_ALPHABET **ret_abc, P7_HMM **opt_hmm)
2023-08-16T21:54:04,606    ^
2023-08-16T21:54:04,607   build/temp.linux-armv7l-cpython-37/p7_hmmfile.c:1585:1: note: code may be misoptimized unless -fno-strict-aliasing is used
2023-08-16T21:54:04,607   building 'pyhmmer.daemon' extension
2023-08-16T21:54:04,607   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -DHAS_PYINTERPRETERSTATE_GETID=1 -DeslENABLE_NEON=1 -DCYTHON_WITHOUT_ASSERTIONS=1 -Ibuild/temp.linux-armv7l-cpython-37 -Ivendor/easel -Ivendor/hmmer/src -Ivendor/hmmer/libdivsufsort -Ivendor/easel -I/usr/include/python3.7m -c pyhmmer/daemon.c -o build/temp.linux-armv7l-cpython-37/pyhmmer/daemon.o -mfpu=neon -Wno-unused-variable
2023-08-16T21:55:39,782   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro build/temp.linux-armv7l-cpython-37/pyhmmer/daemon.o build/temp.linux-armv7l-cpython-37/libhmmer.a build/temp.linux-armv7l-cpython-37/libeasel.a build/temp.linux-armv7l-cpython-37/libdivsufsort.a -Lbuild/temp.linux-armv7l-cpython-37 -L/usr/lib -Lbuild/temp.linux-armv7l-cpython-37 -lhmmer -leasel -ldivsufsort -ldivsufsort -leasel -lhmmer -o build/lib.linux-armv7l-cpython-37/pyhmmer/daemon.cpython-37m-arm-linux-gnueabihf.so -mfpu=neon
2023-08-16T21:57:30,869   installing to build/bdist.linux-armv7l/wheel
2023-08-16T21:57:30,870   running install
2023-08-16T21:57:30,935   running install_lib
2023-08-16T21:57:30,952   creating build/bdist.linux-armv7l
2023-08-16T21:57:30,953   creating build/bdist.linux-armv7l/wheel
2023-08-16T21:57:30,957   creating build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:30,959   copying build/lib.linux-armv7l-cpython-37/pyhmmer/daemon.pyx -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:30,965   copying build/lib.linux-armv7l-cpython-37/pyhmmer/plan7.pyi -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:30,971   copying build/lib.linux-armv7l-cpython-37/pyhmmer/_getid.pxi -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:30,974   copying build/lib.linux-armv7l-cpython-37/pyhmmer/easel.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:31,132   copying build/lib.linux-armv7l-cpython-37/pyhmmer/plan7.pyx -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:31,153   copying build/lib.linux-armv7l-cpython-37/pyhmmer/__init__.py -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:31,156   copying build/lib.linux-armv7l-cpython-37/pyhmmer/plan7.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:31,387   copying build/lib.linux-armv7l-cpython-37/pyhmmer/utils.py -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:31,392   copying build/lib.linux-armv7l-cpython-37/pyhmmer/exceptions.pxi -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:31,396   copying build/lib.linux-armv7l-cpython-37/pyhmmer/hmmer.py -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:31,405   creating build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-08-16T21:57:31,407   copying build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj/bsd.h -> build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-08-16T21:57:31,413   copying build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj/bsd.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-08-16T21:57:31,417   copying build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj/linux.h -> build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-08-16T21:57:31,422   copying build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj/util.h -> build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-08-16T21:57:31,426   copying build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj/__init__.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-08-16T21:57:31,429   copying build/lib.linux-armv7l-cpython-37/pyhmmer/fileobj/linux.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/fileobj
2023-08-16T21:57:31,432   copying build/lib.linux-armv7l-cpython-37/pyhmmer/easel.pyi -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:31,438   copying build/lib.linux-armv7l-cpython-37/pyhmmer/daemon.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:31,492   copying build/lib.linux-armv7l-cpython-37/pyhmmer/daemon.pyi -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:31,496   copying build/lib.linux-armv7l-cpython-37/pyhmmer/errors.pyx -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:31,502   copying build/lib.linux-armv7l-cpython-37/pyhmmer/errors.pyi -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:31,506   copying build/lib.linux-armv7l-cpython-37/pyhmmer/errors.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:31,524   creating build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-08-16T21:57:31,526   copying build/lib.linux-armv7l-cpython-37/pyhmmer/reexports/p7_tophits.h -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-08-16T21:57:31,530   copying build/lib.linux-armv7l-cpython-37/pyhmmer/reexports/esl_sqio_ascii.h -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-08-16T21:57:31,534   copying build/lib.linux-armv7l-cpython-37/pyhmmer/reexports/__init__.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-08-16T21:57:31,537   copying build/lib.linux-armv7l-cpython-37/pyhmmer/reexports/esl_sqio_ascii.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-08-16T21:57:31,541   copying build/lib.linux-armv7l-cpython-37/pyhmmer/reexports/p7_hmmfile.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-08-16T21:57:31,545   copying build/lib.linux-armv7l-cpython-37/pyhmmer/reexports/p7_tophits.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-08-16T21:57:31,549   copying build/lib.linux-armv7l-cpython-37/pyhmmer/reexports/p7_hmmfile.h -> build/bdist.linux-armv7l/wheel/pyhmmer/reexports
2023-08-16T21:57:31,553   copying build/lib.linux-armv7l-cpython-37/pyhmmer/easel.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:31,558   copying build/lib.linux-armv7l-cpython-37/pyhmmer/easel.pyx -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:31,575   copying build/lib.linux-armv7l-cpython-37/pyhmmer/plan7.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:31,580   copying build/lib.linux-armv7l-cpython-37/pyhmmer/daemon.pxd -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:31,584   copying build/lib.linux-armv7l-cpython-37/pyhmmer/py.typed -> build/bdist.linux-armv7l/wheel/pyhmmer
2023-08-16T21:57:31,588   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-08-16T21:57:31,590   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/__init__.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-08-16T21:57:31,595   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-08-16T21:57:31,597   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_optimizedprofile.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-08-16T21:57:31,601   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_pipeline.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-08-16T21:57:31,606   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_hit.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-08-16T21:57:31,610   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/__init__.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-08-16T21:57:31,614   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_hmmfile.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-08-16T21:57:31,618   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_hmm.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-08-16T21:57:31,623   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_tophits.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-08-16T21:57:31,628   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_traces.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-08-16T21:57:31,631   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_profile.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-08-16T21:57:31,635   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_builder.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-08-16T21:57:31,640   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_background.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-08-16T21:57:31,643   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_tracealigner.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-08-16T21:57:31,647   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_plan7/test_block.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_plan7
2023-08-16T21:57:31,651   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/utils.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-08-16T21:57:31,655   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_errors.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-08-16T21:57:31,660   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-08-16T21:57:31,662   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_matrix.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-08-16T21:57:31,667   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_sequence.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-08-16T21:57:31,671   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/__init__.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-08-16T21:57:31,675   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_msafile.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-08-16T21:57:31,680   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_vector.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-08-16T21:57:31,685   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_randomness.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-08-16T21:57:31,689   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_bitfield.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-08-16T21:57:31,693   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_alphabet.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-08-16T21:57:31,696   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_sequencefile.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-08-16T21:57:31,702   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_gencode.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-08-16T21:57:31,706   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_ssi.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-08-16T21:57:31,710   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_msa.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-08-16T21:57:31,716   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_keyhash.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-08-16T21:57:31,720   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_easel/test_block.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/test_easel
2023-08-16T21:57:31,726   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_hmmer.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-08-16T21:57:31,736   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data
2023-08-16T21:57:31,737   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/README.md -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data
2023-08-16T21:57:31,742   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms
2023-08-16T21:57:31,745   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/bin
2023-08-16T21:57:31,748   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin/PF02826.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/bin
2023-08-16T21:57:31,754   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin/PKSI-AT.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/bin
2023-08-16T21:57:31,762   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin/Thioesterase.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/bin
2023-08-16T21:57:31,769   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/bin/t2pks.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/bin
2023-08-16T21:57:31,903   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-08-16T21:57:31,905   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt/LuxC.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-08-16T21:57:31,918   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt/t2pks.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-08-16T21:57:32,202   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt/Thioesterase.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-08-16T21:57:32,211   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt/laccase.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-08-16T21:57:32,234   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt/PF02826.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-08-16T21:57:32,244   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt/PKSI-AT.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-08-16T21:57:32,256   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt/bmyD.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt
2023-08-16T21:57:32,273   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt2
2023-08-16T21:57:32,275   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2/PKSI-AT.hmm2 -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt2
2023-08-16T21:57:32,285   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2/PF02826.hmm2 -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt2
2023-08-16T21:57:32,293   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2/t2pks.hmm2 -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt2
2023-08-16T21:57:32,511   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/txt2/Thioesterase.hmm2 -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/txt2
2023-08-16T21:57:32,522   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:32,524   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/t2pks.hmm.h3p -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:32,633   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:32,640   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/t2pks.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:32,899   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PF02826.hmm.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:32,905   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PF02826.hmm.h3p -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:32,913   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3i -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:32,918   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3f -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:32,925   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/Thioesterase.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:32,937   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/t2pks.hmm.h3f -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:32,993   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3p -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:33,001   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:33,008   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/t2pks.hmm.h3m -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:33,132   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3f -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:33,138   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PF02826.hmm.h3f -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:33,143   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PF02826.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:33,152   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PKSI-AT.hmm -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:33,164   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/t2pks.hmm.h3i -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:33,168   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PF02826.hmm.h3i -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:33,172   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3i -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:33,175   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3p -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms/db
2023-08-16T21:57:33,184   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/hmms/make.sh -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/hmms
2023-08-16T21:57:33,188   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-08-16T21:57:33,190   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs/PKSI.faa -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-08-16T21:57:33,196   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs/BGC0001090.gbk -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-08-16T21:57:33,216   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs/CP000560.2.fna -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-08-16T21:57:33,432   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs/938293.PRJEB85.HG003687.faa -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-08-16T21:57:33,474   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs/CP040672.1.genes_100.fna -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-08-16T21:57:33,484   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs/bmyD.fna -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-08-16T21:57:33,488   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/seqs/LuxC.faa -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/seqs
2023-08-16T21:57:33,494   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-08-16T21:57:33,496   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/KR-1_bkup.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-08-16T21:57:33,500   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/KR-3.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-08-16T21:57:33,506   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/KR-6.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-08-16T21:57:33,511   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/p12748-3.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-08-16T21:57:33,515   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/p12748-1.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-08-16T21:57:33,519   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/KR-5.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-08-16T21:57:33,525   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/KR-4.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-08-16T21:57:33,530   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/p12748-2.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-08-16T21:57:33,534   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/KR-1.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-08-16T21:57:33,539   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/jackhmmer/KR-2.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/jackhmmer
2023-08-16T21:57:33,544   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/msa
2023-08-16T21:57:33,546   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa/LuxC.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/msa
2023-08-16T21:57:33,551   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa/laccase.clw -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/msa
2023-08-16T21:57:33,555   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa/LuxC.hmmalign.sto -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/msa
2023-08-16T21:57:33,560   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/msa/LuxC.faa -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/msa
2023-08-16T21:57:33,566   creating build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-08-16T21:57:33,568   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables/PF02826.tbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-08-16T21:57:33,573   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables/t2pks.scan.tbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-08-16T21:57:33,577   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables/PF02826.domtbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-08-16T21:57:33,582   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables/t2pks.domtbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-08-16T21:57:33,589   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables/t2pks.tbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-08-16T21:57:33,594   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables/A0A089QRB9.domtbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-08-16T21:57:33,598   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables/bmyD2.tbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-08-16T21:57:33,602   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables/bmyD1.tbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-08-16T21:57:33,606   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/data/tables/bmyD3.tbl -> build/bdist.linux-armv7l/wheel/pyhmmer/tests/data/tables
2023-08-16T21:57:33,611   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/test_doctest.py -> build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-08-16T21:57:33,616   copying build/lib.linux-armv7l-cpython-37/pyhmmer/tests/requirements.txt -> build/bdist.linux-armv7l/wheel/pyhmmer/tests
2023-08-16T21:57:33,619   running install_egg_info
2023-08-16T21:57:33,647   Copying pyhmmer.egg-info to build/bdist.linux-armv7l/wheel/pyhmmer-0.10.0-py3.7.egg-info
2023-08-16T21:57:33,674   running install_scripts
2023-08-16T21:57:33,775   creating build/bdist.linux-armv7l/wheel/pyhmmer-0.10.0.dist-info/WHEEL
2023-08-16T21:57:33,781   creating '/tmp/pip-wheel-lqb7w667/.tmp-xm0nenq2/pyhmmer-0.10.0-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-08-16T21:57:33,787   adding 'pyhmmer/__init__.py'
2023-08-16T21:57:33,790   adding 'pyhmmer/_getid.pxi'
2023-08-16T21:57:34,273   adding 'pyhmmer/daemon.cpython-37m-arm-linux-gnueabihf.so'
2023-08-16T21:57:34,295   adding 'pyhmmer/daemon.pxd'
2023-08-16T21:57:34,298   adding 'pyhmmer/daemon.pyi'
2023-08-16T21:57:34,305   adding 'pyhmmer/daemon.pyx'
2023-08-16T21:57:35,701   adding 'pyhmmer/easel.cpython-37m-arm-linux-gnueabihf.so'
2023-08-16T21:57:35,767   adding 'pyhmmer/easel.pxd'
2023-08-16T21:57:35,773   adding 'pyhmmer/easel.pyi'
2023-08-16T21:57:35,827   adding 'pyhmmer/easel.pyx'
2023-08-16T21:57:35,931   adding 'pyhmmer/errors.cpython-37m-arm-linux-gnueabihf.so'
2023-08-16T21:57:35,938   adding 'pyhmmer/errors.pyi'
2023-08-16T21:57:35,941   adding 'pyhmmer/errors.pyx'
2023-08-16T21:57:35,944   adding 'pyhmmer/exceptions.pxi'
2023-08-16T21:57:35,960   adding 'pyhmmer/hmmer.py'
2023-08-16T21:57:38,071   adding 'pyhmmer/plan7.cpython-37m-arm-linux-gnueabihf.so'
2023-08-16T21:57:38,168   adding 'pyhmmer/plan7.pxd'
2023-08-16T21:57:38,176   adding 'pyhmmer/plan7.pyi'
2023-08-16T21:57:38,250   adding 'pyhmmer/plan7.pyx'
2023-08-16T21:57:38,259   adding 'pyhmmer/py.typed'
2023-08-16T21:57:38,263   adding 'pyhmmer/utils.py'
2023-08-16T21:57:38,267   adding 'pyhmmer/fileobj/__init__.pxd'
2023-08-16T21:57:38,270   adding 'pyhmmer/fileobj/bsd.h'
2023-08-16T21:57:38,272   adding 'pyhmmer/fileobj/bsd.pxd'
2023-08-16T21:57:38,275   adding 'pyhmmer/fileobj/linux.h'
2023-08-16T21:57:38,278   adding 'pyhmmer/fileobj/linux.pxd'
2023-08-16T21:57:38,281   adding 'pyhmmer/fileobj/util.h'
2023-08-16T21:57:38,284   adding 'pyhmmer/reexports/__init__.pxd'
2023-08-16T21:57:38,287   adding 'pyhmmer/reexports/esl_sqio_ascii.h'
2023-08-16T21:57:38,290   adding 'pyhmmer/reexports/esl_sqio_ascii.pxd'
2023-08-16T21:57:38,293   adding 'pyhmmer/reexports/p7_hmmfile.h'
2023-08-16T21:57:38,295   adding 'pyhmmer/reexports/p7_hmmfile.pxd'
2023-08-16T21:57:38,298   adding 'pyhmmer/reexports/p7_tophits.h'
2023-08-16T21:57:38,300   adding 'pyhmmer/reexports/p7_tophits.pxd'
2023-08-16T21:57:38,304   adding 'pyhmmer/tests/__init__.py'
2023-08-16T21:57:38,306   adding 'pyhmmer/tests/requirements.txt'
2023-08-16T21:57:38,309   adding 'pyhmmer/tests/test_doctest.py'
2023-08-16T21:57:38,312   adding 'pyhmmer/tests/test_errors.py'
2023-08-16T21:57:38,319   adding 'pyhmmer/tests/test_hmmer.py'
2023-08-16T21:57:38,322   adding 'pyhmmer/tests/utils.py'
2023-08-16T21:57:38,326   adding 'pyhmmer/tests/data/README.md'
2023-08-16T21:57:38,330   adding 'pyhmmer/tests/data/hmms/make.sh'
2023-08-16T21:57:38,338   adding 'pyhmmer/tests/data/hmms/bin/PF02826.h3m'
2023-08-16T21:57:38,350   adding 'pyhmmer/tests/data/hmms/bin/PKSI-AT.h3m'
2023-08-16T21:57:38,360   adding 'pyhmmer/tests/data/hmms/bin/Thioesterase.h3m'
2023-08-16T21:57:38,774   adding 'pyhmmer/tests/data/hmms/bin/t2pks.h3m'
2023-08-16T21:57:38,859   adding 'pyhmmer/tests/data/hmms/db/PF02826.hmm'
2023-08-16T21:57:38,866   adding 'pyhmmer/tests/data/hmms/db/PF02826.hmm.h3f'
2023-08-16T21:57:38,868   adding 'pyhmmer/tests/data/hmms/db/PF02826.hmm.h3i'
2023-08-16T21:57:38,876   adding 'pyhmmer/tests/data/hmms/db/PF02826.hmm.h3m'
2023-08-16T21:57:38,888   adding 'pyhmmer/tests/data/hmms/db/PF02826.hmm.h3p'
2023-08-16T21:57:38,951   adding 'pyhmmer/tests/data/hmms/db/PKSI-AT.hmm'
2023-08-16T21:57:38,960   adding 'pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3f'
2023-08-16T21:57:38,963   adding 'pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3i'
2023-08-16T21:57:38,974   adding 'pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3m'
2023-08-16T21:57:38,993   adding 'pyhmmer/tests/data/hmms/db/PKSI-AT.hmm.h3p'
2023-08-16T21:57:39,049   adding 'pyhmmer/tests/data/hmms/db/Thioesterase.hmm'
2023-08-16T21:57:39,057   adding 'pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3f'
2023-08-16T21:57:39,060   adding 'pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3i'
2023-08-16T21:57:39,069   adding 'pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3m'
2023-08-16T21:57:39,085   adding 'pyhmmer/tests/data/hmms/db/Thioesterase.hmm.h3p'
2023-08-16T21:57:41,255   adding 'pyhmmer/tests/data/hmms/db/t2pks.hmm'
2023-08-16T21:57:41,675   adding 'pyhmmer/tests/data/hmms/db/t2pks.hmm.h3f'
2023-08-16T21:57:41,700   adding 'pyhmmer/tests/data/hmms/db/t2pks.hmm.h3i'
2023-08-16T21:57:42,111   adding 'pyhmmer/tests/data/hmms/db/t2pks.hmm.h3m'
2023-08-16T21:57:42,933   adding 'pyhmmer/tests/data/hmms/db/t2pks.hmm.h3p'
2023-08-16T21:57:43,069   adding 'pyhmmer/tests/data/hmms/txt/LuxC.hmm'
2023-08-16T21:57:43,106   adding 'pyhmmer/tests/data/hmms/txt/PF02826.hmm'
2023-08-16T21:57:43,170   adding 'pyhmmer/tests/data/hmms/txt/PKSI-AT.hmm'
2023-08-16T21:57:43,224   adding 'pyhmmer/tests/data/hmms/txt/Thioesterase.hmm'
2023-08-16T21:57:43,248   adding 'pyhmmer/tests/data/hmms/txt/bmyD.hmm'
2023-08-16T21:57:43,340   adding 'pyhmmer/tests/data/hmms/txt/laccase.hmm'
2023-08-16T21:57:45,514   adding 'pyhmmer/tests/data/hmms/txt/t2pks.hmm'
2023-08-16T21:57:45,657   adding 'pyhmmer/tests/data/hmms/txt2/PF02826.hmm2'
2023-08-16T21:57:45,695   adding 'pyhmmer/tests/data/hmms/txt2/PKSI-AT.hmm2'
2023-08-16T21:57:45,729   adding 'pyhmmer/tests/data/hmms/txt2/Thioesterase.hmm2'
2023-08-16T21:57:47,197   adding 'pyhmmer/tests/data/hmms/txt2/t2pks.hmm2'
2023-08-16T21:57:47,297   adding 'pyhmmer/tests/data/jackhmmer/KR-1.sto'
2023-08-16T21:57:47,300   adding 'pyhmmer/tests/data/jackhmmer/KR-1_bkup.sto'
2023-08-16T21:57:47,305   adding 'pyhmmer/tests/data/jackhmmer/KR-2.sto'
2023-08-16T21:57:47,310   adding 'pyhmmer/tests/data/jackhmmer/KR-3.sto'
2023-08-16T21:57:47,315   adding 'pyhmmer/tests/data/jackhmmer/KR-4.sto'
2023-08-16T21:57:47,321   adding 'pyhmmer/tests/data/jackhmmer/KR-5.sto'
2023-08-16T21:57:47,326   adding 'pyhmmer/tests/data/jackhmmer/KR-6.sto'
2023-08-16T21:57:47,330   adding 'pyhmmer/tests/data/jackhmmer/p12748-1.sto'
2023-08-16T21:57:47,333   adding 'pyhmmer/tests/data/jackhmmer/p12748-2.sto'
2023-08-16T21:57:47,336   adding 'pyhmmer/tests/data/jackhmmer/p12748-3.sto'
2023-08-16T21:57:47,341   adding 'pyhmmer/tests/data/msa/LuxC.faa'
2023-08-16T21:57:47,346   adding 'pyhmmer/tests/data/msa/LuxC.hmmalign.sto'
2023-08-16T21:57:47,351   adding 'pyhmmer/tests/data/msa/LuxC.sto'
2023-08-16T21:57:47,355   adding 'pyhmmer/tests/data/msa/laccase.clw'
2023-08-16T21:57:47,674   adding 'pyhmmer/tests/data/seqs/938293.PRJEB85.HG003687.faa'
2023-08-16T21:57:47,787   adding 'pyhmmer/tests/data/seqs/BGC0001090.gbk'
2023-08-16T21:57:52,943   adding 'pyhmmer/tests/data/seqs/CP000560.2.fna'
2023-08-16T21:57:53,141   adding 'pyhmmer/tests/data/seqs/CP040672.1.genes_100.fna'
2023-08-16T21:57:53,147   adding 'pyhmmer/tests/data/seqs/LuxC.faa'
2023-08-16T21:57:53,154   adding 'pyhmmer/tests/data/seqs/PKSI.faa'
2023-08-16T21:57:53,157   adding 'pyhmmer/tests/data/seqs/bmyD.fna'
2023-08-16T21:57:53,162   adding 'pyhmmer/tests/data/tables/A0A089QRB9.domtbl'
2023-08-16T21:57:53,167   adding 'pyhmmer/tests/data/tables/PF02826.domtbl'
2023-08-16T21:57:53,171   adding 'pyhmmer/tests/data/tables/PF02826.tbl'
2023-08-16T21:57:53,174   adding 'pyhmmer/tests/data/tables/bmyD1.tbl'
2023-08-16T21:57:53,177   adding 'pyhmmer/tests/data/tables/bmyD2.tbl'
2023-08-16T21:57:53,179   adding 'pyhmmer/tests/data/tables/bmyD3.tbl'
2023-08-16T21:57:53,193   adding 'pyhmmer/tests/data/tables/t2pks.domtbl'
2023-08-16T21:57:53,198   adding 'pyhmmer/tests/data/tables/t2pks.scan.tbl'
2023-08-16T21:57:53,205   adding 'pyhmmer/tests/data/tables/t2pks.tbl'
2023-08-16T21:57:53,210   adding 'pyhmmer/tests/test_easel/__init__.py'
2023-08-16T21:57:53,213   adding 'pyhmmer/tests/test_easel/test_alphabet.py'
2023-08-16T21:57:53,216   adding 'pyhmmer/tests/test_easel/test_bitfield.py'
2023-08-16T21:57:53,219   adding 'pyhmmer/tests/test_easel/test_block.py'
2023-08-16T21:57:53,222   adding 'pyhmmer/tests/test_easel/test_gencode.py'
2023-08-16T21:57:53,225   adding 'pyhmmer/tests/test_easel/test_keyhash.py'
2023-08-16T21:57:53,229   adding 'pyhmmer/tests/test_easel/test_matrix.py'
2023-08-16T21:57:53,232   adding 'pyhmmer/tests/test_easel/test_msa.py'
2023-08-16T21:57:53,236   adding 'pyhmmer/tests/test_easel/test_msafile.py'
2023-08-16T21:57:53,239   adding 'pyhmmer/tests/test_easel/test_randomness.py'
2023-08-16T21:57:53,243   adding 'pyhmmer/tests/test_easel/test_sequence.py'
2023-08-16T21:57:53,247   adding 'pyhmmer/tests/test_easel/test_sequencefile.py'
2023-08-16T21:57:53,250   adding 'pyhmmer/tests/test_easel/test_ssi.py'
2023-08-16T21:57:53,254   adding 'pyhmmer/tests/test_easel/test_vector.py'
2023-08-16T21:57:53,258   adding 'pyhmmer/tests/test_plan7/__init__.py'
2023-08-16T21:57:53,261   adding 'pyhmmer/tests/test_plan7/test_background.py'
2023-08-16T21:57:53,264   adding 'pyhmmer/tests/test_plan7/test_block.py'
2023-08-16T21:57:53,268   adding 'pyhmmer/tests/test_plan7/test_builder.py'
2023-08-16T21:57:53,271   adding 'pyhmmer/tests/test_plan7/test_hit.py'
2023-08-16T21:57:53,275   adding 'pyhmmer/tests/test_plan7/test_hmm.py'
2023-08-16T21:57:53,278   adding 'pyhmmer/tests/test_plan7/test_hmmfile.py'
2023-08-16T21:57:53,281   adding 'pyhmmer/tests/test_plan7/test_optimizedprofile.py'
2023-08-16T21:57:53,286   adding 'pyhmmer/tests/test_plan7/test_pipeline.py'
2023-08-16T21:57:53,289   adding 'pyhmmer/tests/test_plan7/test_profile.py'
2023-08-16T21:57:53,294   adding 'pyhmmer/tests/test_plan7/test_tophits.py'
2023-08-16T21:57:53,297   adding 'pyhmmer/tests/test_plan7/test_tracealigner.py'
2023-08-16T21:57:53,300   adding 'pyhmmer/tests/test_plan7/test_traces.py'
2023-08-16T21:57:53,305   adding 'pyhmmer-0.10.0.dist-info/COPYING'
2023-08-16T21:57:53,309   adding 'pyhmmer-0.10.0.dist-info/METADATA'
2023-08-16T21:57:53,312   adding 'pyhmmer-0.10.0.dist-info/WHEEL'
2023-08-16T21:57:53,314   adding 'pyhmmer-0.10.0.dist-info/top_level.txt'
2023-08-16T21:57:53,319   adding 'pyhmmer-0.10.0.dist-info/RECORD'
2023-08-16T21:57:53,674   removing build/bdist.linux-armv7l/wheel
2023-08-16T21:57:53,789   checking whether <stdio.h> can be included... yes
2023-08-16T21:57:53,790   checking whether <stdlib.h> can be included... yes
2023-08-16T21:57:53,790   checking whether <string.h> can be included... yes
2023-08-16T21:57:53,790   checking whether <inttypes.h> can be included... yes
2023-08-16T21:57:53,791   checking whether <stdint.h> can be included... yes
2023-08-16T21:57:53,791   checking whether <strings.h> can be included... yes
2023-08-16T21:57:53,791   checking whether <sys/stat.h> can be included... yes
2023-08-16T21:57:53,792   checking whether <sys/types.h> can be included... yes
2023-08-16T21:57:53,792   checking whether <unistd.h> can be included... yes
2023-08-16T21:57:53,792   checking whether <endian.h> can be included... yes
2023-08-16T21:57:53,793   checking whether <netinet/in.h> can be included... yes
2023-08-16T21:57:53,793   checking whether <sys/param.h> can be included... yes
2023-08-16T21:57:53,793   checking whether <sys/sysctl.h> can be included... yes
2023-08-16T21:57:53,794   checking whether function 'aligned_alloc' is available... yes
2023-08-16T21:57:53,794   checking whether function 'erfc' is available... yes
2023-08-16T21:57:53,794   checking whether function 'getpid' is available... yes
2023-08-16T21:57:53,795   checking whether function '_mm_malloc' is available... no
2023-08-16T21:57:53,795   checking whether function 'popen' is available... yes
2023-08-16T21:57:53,795   checking whether function 'posix_memalign' is available... yes
2023-08-16T21:57:53,796   checking whether function 'strcasecmp' is available... yes
2023-08-16T21:57:53,796   checking whether function 'strsep' is available... yes
2023-08-16T21:57:53,796   checking whether function 'sysconf' is available... yes
2023-08-16T21:57:53,797   checking whether function 'sysctl' is available... yes
2023-08-16T21:57:53,797   checking whether function 'times' is available... yes
2023-08-16T21:57:53,797   checking whether function 'fseeko' is available... yes
2023-08-16T21:57:53,798   checking whether <endian.h> can be included... yes
2023-08-16T21:57:53,798   checking whether <inttypes.h> can be included... yes
2023-08-16T21:57:53,798   checking whether <stdint.h> can be included... yes
2023-08-16T21:57:53,799   checking whether <unistd.h> can be included... yes
2023-08-16T21:57:53,799   checking whether <sys/types.h> can be included... yes
2023-08-16T21:57:53,799   checking whether <netinet/in.h> can be included... yes
2023-08-16T21:57:53,800   checking whether <sys/param.h> can be included... yes
2023-08-16T21:57:53,800   checking whether <sys/sysctl.h> can be included... yes
2023-08-16T21:57:53,800   checking whether function 'mkstemp' is available... yes
2023-08-16T21:57:53,800   checking whether function 'popen' is available... yes
2023-08-16T21:57:53,801   checking whether function 'putenv' is available... yes
2023-08-16T21:57:53,801   checking whether function 'strcasecmp' is available... yes
2023-08-16T21:57:53,801   checking whether function 'strsep' is available... yes
2023-08-16T21:57:53,802   checking whether function 'times' is available... yes
2023-08-16T21:57:53,802   checking whether function 'getpid' is available... yes
2023-08-16T21:57:53,802   checking whether function 'sysctl' is available... yes
2023-08-16T21:57:53,803   checking whether function 'sysconf' is available... yes
2023-08-16T21:57:53,803   checking whether function 'getcwd' is available... yes
2023-08-16T21:57:53,803   checking whether function 'chmod' is available... yes
2023-08-16T21:57:53,803   checking whether function 'stat' is available... yes
2023-08-16T21:57:53,804   checking whether function 'fstat' is available... yes
2023-08-16T21:57:53,804   checking whether function 'erfc' is available... yes
2023-08-16T21:57:53,804   warning: include/libhmmer/impl_neon/p7_oprofile.pxd:13:4: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310
2023-08-16T21:57:53,805   warning: include/libhmmer/impl_neon/p7_oprofile.pxd:17:4: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310
2023-08-16T21:57:53,805   warning: include/libhmmer/impl_neon/p7_oprofile.pxd:18:4: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310
2023-08-16T21:57:53,805   warning: include/libhmmer/impl_neon/p7_oprofile.pxd:19:4: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310
2023-08-16T21:57:53,805   warning: include/libhmmer/impl_neon/p7_oprofile.pxd:40:4: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310
2023-08-16T21:57:53,806   warning: include/libhmmer/impl_neon/p7_oprofile.pxd:47:4: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310
2023-08-16T21:57:53,806   warning: include/libhmmer/impl_neon/p7_oprofile.pxd:52:4: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310
2023-08-16T21:57:53,806   warning: include/libhmmer/impl_neon/p7_oprofile.pxd:13:4: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310
2023-08-16T21:57:53,807   warning: include/libhmmer/impl_neon/p7_oprofile.pxd:17:4: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310
2023-08-16T21:57:53,807   warning: include/libhmmer/impl_neon/p7_oprofile.pxd:18:4: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310
2023-08-16T21:57:53,807   warning: include/libhmmer/impl_neon/p7_oprofile.pxd:19:4: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310
2023-08-16T21:57:53,808   warning: include/libhmmer/impl_neon/p7_oprofile.pxd:40:4: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310
2023-08-16T21:57:53,808   warning: include/libhmmer/impl_neon/p7_oprofile.pxd:47:4: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310
2023-08-16T21:57:53,808   warning: include/libhmmer/impl_neon/p7_oprofile.pxd:52:4: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310
2023-08-16T21:57:53,809   checking whether `PyInterpreterState_GetID` is available
2023-08-16T21:57:53,809   yes
2023-08-16T21:57:53,809   building pyhmmer.errors for linux-armv7l with unix compiler
2023-08-16T21:57:53,809   building pyhmmer.easel for linux-armv7l with unix compiler
2023-08-16T21:57:53,810   building pyhmmer.plan7 for linux-armv7l with unix compiler
2023-08-16T21:57:53,810   building pyhmmer.daemon for linux-armv7l with unix compiler
2023-08-16T21:57:56,361   Building wheel for pyhmmer (pyproject.toml): finished with status 'done'
2023-08-16T21:57:57,104   Created wheel for pyhmmer: filename=pyhmmer-0.10.0-cp37-cp37m-linux_armv7l.whl size=12360956 sha256=d3dccbcc605d6187a81a48ed89b005185e14e946e16b01cc495a93a4a4e4893d
2023-08-16T21:57:57,106   Stored in directory: /tmp/pip-ephem-wheel-cache-k07pnqxa/wheels/a3/34/0b/8ccad096ed71841416c81ac9a48ef73ee99ca08d58a6731481
2023-08-16T21:57:57,160 Successfully built pyhmmer
2023-08-16T21:57:58,099 Removed build tracker: '/tmp/pip-build-tracker-j3gqxiv2'