2023-08-21T16:59:50,668 Created temporary directory: /tmp/pip-build-tracker-ha0bvddv 2023-08-21T16:59:50,672 Initialized build tracking at /tmp/pip-build-tracker-ha0bvddv 2023-08-21T16:59:50,672 Created build tracker: /tmp/pip-build-tracker-ha0bvddv 2023-08-21T16:59:50,672 Entered build tracker: /tmp/pip-build-tracker-ha0bvddv 2023-08-21T16:59:50,673 Created temporary directory: /tmp/pip-wheel-t482b7fw 2023-08-21T16:59:50,682 Created temporary directory: /tmp/pip-ephem-wheel-cache-_fzht7nf 2023-08-21T16:59:50,734 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-08-21T16:59:50,742 2 location(s) to search for versions of seldompy: 2023-08-21T16:59:50,742 * https://pypi.org/simple/seldompy/ 2023-08-21T16:59:50,742 * https://www.piwheels.org/simple/seldompy/ 2023-08-21T16:59:50,743 Fetching project page and analyzing links: https://pypi.org/simple/seldompy/ 2023-08-21T16:59:50,744 Getting page https://pypi.org/simple/seldompy/ 2023-08-21T16:59:50,748 Found index url https://pypi.org/simple/ 2023-08-21T16:59:50,942 Fetched page https://pypi.org/simple/seldompy/ as application/vnd.pypi.simple.v1+json 2023-08-21T16:59:50,946 Skipping link: No binaries permitted for seldompy: https://files.pythonhosted.org/packages/15/1e/e2ffb54d95eb04e2c11dd109754fe19e290c4a9ab4e2bf2a57159a503d92/SELDOMpy-0.9.8-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/seldompy/) 2023-08-21T16:59:50,946 Found link https://files.pythonhosted.org/packages/e0/c2/eba2f28b595340f8c4010ea35a809f50d6b8bace971105cf2300bbbc0ce7/SELDOMpy-0.9.8.tar.gz (from https://pypi.org/simple/seldompy/), version: 0.9.8 2023-08-21T16:59:50,947 Skipping link: No binaries permitted for seldompy: https://files.pythonhosted.org/packages/cf/fd/55148fcbd4b491569b925910992a7dbfb4cf630ee94833bee16e50f9e330/SELDOMpy-0.9.9-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/seldompy/) 2023-08-21T16:59:50,947 Found link https://files.pythonhosted.org/packages/00/23/70aa2c3b7b7acaec975e9932bd8c6f75c84068615791d7ec9e8d050db099/SELDOMpy-0.9.9.tar.gz (from https://pypi.org/simple/seldompy/), version: 0.9.9 2023-08-21T16:59:50,948 Fetching project page and analyzing links: https://www.piwheels.org/simple/seldompy/ 2023-08-21T16:59:50,949 Getting page https://www.piwheels.org/simple/seldompy/ 2023-08-21T16:59:50,951 Found index url https://www.piwheels.org/simple/ 2023-08-21T16:59:51,187 Fetched page https://www.piwheels.org/simple/seldompy/ as text/html 2023-08-21T16:59:51,189 Skipping link: not a file: https://www.piwheels.org/simple/seldompy/ 2023-08-21T16:59:51,189 Skipping link: not a file: https://pypi.org/simple/seldompy/ 2023-08-21T16:59:51,221 Given no hashes to check 1 links for project 'seldompy': discarding no candidates 2023-08-21T16:59:51,252 Collecting seldompy==0.9.9 2023-08-21T16:59:51,256 Created temporary directory: /tmp/pip-unpack-qlk2xt3l 2023-08-21T16:59:51,446 Downloading SELDOMpy-0.9.9.tar.gz (260 kB) 2023-08-21T16:59:52,152 Added seldompy==0.9.9 from https://files.pythonhosted.org/packages/00/23/70aa2c3b7b7acaec975e9932bd8c6f75c84068615791d7ec9e8d050db099/SELDOMpy-0.9.9.tar.gz to build tracker '/tmp/pip-build-tracker-ha0bvddv' 2023-08-21T16:59:52,155 Running setup.py (path:/tmp/pip-wheel-t482b7fw/seldompy_06f1baad1a584aeaaf0a67fe4f99f98c/setup.py) egg_info for package seldompy 2023-08-21T16:59:52,156 Created temporary directory: /tmp/pip-pip-egg-info-6s4_uhgo 2023-08-21T16:59:52,157 Preparing metadata (setup.py): started 2023-08-21T16:59:52,159 Running command python setup.py egg_info 2023-08-21T16:59:54,387 running egg_info 2023-08-21T16:59:54,390 creating /tmp/pip-pip-egg-info-6s4_uhgo/SELDOMpy.egg-info 2023-08-21T16:59:54,476 writing /tmp/pip-pip-egg-info-6s4_uhgo/SELDOMpy.egg-info/PKG-INFO 2023-08-21T16:59:54,481 writing dependency_links to /tmp/pip-pip-egg-info-6s4_uhgo/SELDOMpy.egg-info/dependency_links.txt 2023-08-21T16:59:54,486 writing requirements to /tmp/pip-pip-egg-info-6s4_uhgo/SELDOMpy.egg-info/requires.txt 2023-08-21T16:59:54,488 writing top-level names to /tmp/pip-pip-egg-info-6s4_uhgo/SELDOMpy.egg-info/top_level.txt 2023-08-21T16:59:54,491 writing manifest file '/tmp/pip-pip-egg-info-6s4_uhgo/SELDOMpy.egg-info/SOURCES.txt' 2023-08-21T16:59:55,391 reading manifest file '/tmp/pip-pip-egg-info-6s4_uhgo/SELDOMpy.egg-info/SOURCES.txt' 2023-08-21T16:59:55,395 reading manifest template 'MANIFEST.in' 2023-08-21T16:59:55,414 adding license file 'LICENSE.txt' 2023-08-21T16:59:55,429 writing manifest file '/tmp/pip-pip-egg-info-6s4_uhgo/SELDOMpy.egg-info/SOURCES.txt' 2023-08-21T16:59:55,431 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/dist.py:755: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-08-21T16:59:55,432 !! 2023-08-21T16:59:55,433 ******************************************************************************** 2023-08-21T16:59:55,433 Usage of dash-separated 'description-file' will not be supported in future 2023-08-21T16:59:55,433 versions. Please use the underscore name 'description_file' instead. 2023-08-21T16:59:55,434 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-08-21T16:59:55,435 or your builds will no longer be supported. 2023-08-21T16:59:55,436 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-08-21T16:59:55,436 ******************************************************************************** 2023-08-21T16:59:55,437 !! 2023-08-21T16:59:55,438 opt = self.warn_dash_deprecation(opt, section) 2023-08-21T16:59:55,617 Preparing metadata (setup.py): finished with status 'done' 2023-08-21T16:59:55,630 Source in /tmp/pip-wheel-t482b7fw/seldompy_06f1baad1a584aeaaf0a67fe4f99f98c has version 0.9.9, which satisfies requirement seldompy==0.9.9 from https://files.pythonhosted.org/packages/00/23/70aa2c3b7b7acaec975e9932bd8c6f75c84068615791d7ec9e8d050db099/SELDOMpy-0.9.9.tar.gz 2023-08-21T16:59:55,632 Removed seldompy==0.9.9 from https://files.pythonhosted.org/packages/00/23/70aa2c3b7b7acaec975e9932bd8c6f75c84068615791d7ec9e8d050db099/SELDOMpy-0.9.9.tar.gz from build tracker '/tmp/pip-build-tracker-ha0bvddv' 2023-08-21T16:59:55,643 Created temporary directory: /tmp/pip-unpack-vwf0jnrj 2023-08-21T16:59:55,645 Building wheels for collected packages: seldompy 2023-08-21T16:59:55,653 Created temporary directory: /tmp/pip-wheel-_myyi4zs 2023-08-21T16:59:55,654 Building wheel for seldompy (setup.py): started 2023-08-21T16:59:55,656 Destination directory: /tmp/pip-wheel-_myyi4zs 2023-08-21T16:59:55,657 Running command python setup.py bdist_wheel 2023-08-21T16:59:57,393 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/dist.py:755: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-08-21T16:59:57,394 !! 2023-08-21T16:59:57,395 ******************************************************************************** 2023-08-21T16:59:57,396 Usage of dash-separated 'description-file' will not be supported in future 2023-08-21T16:59:57,396 versions. Please use the underscore name 'description_file' instead. 2023-08-21T16:59:57,397 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-08-21T16:59:57,397 or your builds will no longer be supported. 2023-08-21T16:59:57,397 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-08-21T16:59:57,398 ******************************************************************************** 2023-08-21T16:59:57,398 !! 2023-08-21T16:59:57,399 opt = self.warn_dash_deprecation(opt, section) 2023-08-21T16:59:57,899 running bdist_wheel 2023-08-21T16:59:58,785 running build 2023-08-21T16:59:58,786 running build_py 2023-08-21T16:59:58,882 creating build 2023-08-21T16:59:58,883 creating build/lib.linux-armv7l-cpython-37 2023-08-21T16:59:58,885 creating build/lib.linux-armv7l-cpython-37/SELDOMpy 2023-08-21T16:59:58,887 copying SELDOMpy/__init__.py -> build/lib.linux-armv7l-cpython-37/SELDOMpy 2023-08-21T16:59:58,892 creating build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:58,894 copying SELDOMpy/src/__init__.py -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:58,897 running egg_info 2023-08-21T16:59:59,090 writing SELDOMpy.egg-info/PKG-INFO 2023-08-21T16:59:59,095 writing dependency_links to SELDOMpy.egg-info/dependency_links.txt 2023-08-21T16:59:59,099 writing requirements to SELDOMpy.egg-info/requires.txt 2023-08-21T16:59:59,102 writing top-level names to SELDOMpy.egg-info/top_level.txt 2023-08-21T16:59:59,213 reading manifest file 'SELDOMpy.egg-info/SOURCES.txt' 2023-08-21T16:59:59,228 reading manifest template 'MANIFEST.in' 2023-08-21T16:59:59,242 adding license file 'LICENSE.txt' 2023-08-21T16:59:59,263 writing manifest file 'SELDOMpy.egg-info/SOURCES.txt' 2023-08-21T16:59:59,268 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SELDOMpy.examples.MAPK' is absent from the `packages` configuration. 2023-08-21T16:59:59,268 !! 2023-08-21T16:59:59,269 ******************************************************************************** 2023-08-21T16:59:59,269 ############################ 2023-08-21T16:59:59,270 # Package would be ignored # 2023-08-21T16:59:59,270 ############################ 2023-08-21T16:59:59,270 Python recognizes 'SELDOMpy.examples.MAPK' as an importable package[^1], 2023-08-21T16:59:59,271 but it is absent from setuptools' `packages` configuration. 2023-08-21T16:59:59,271 This leads to an ambiguous overall configuration. If you want to distribute this 2023-08-21T16:59:59,272 package, please make sure that 'SELDOMpy.examples.MAPK' is explicitly added 2023-08-21T16:59:59,272 to the `packages` configuration field. 2023-08-21T16:59:59,272 Alternatively, you can also rely on setuptools' discovery methods 2023-08-21T16:59:59,273 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-08-21T16:59:59,273 instead of `find_packages(...)`/`find:`). 2023-08-21T16:59:59,274 You can read more about "package discovery" on setuptools documentation page: 2023-08-21T16:59:59,274 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-08-21T16:59:59,275 If you don't want 'SELDOMpy.examples.MAPK' to be distributed and are 2023-08-21T16:59:59,275 already explicitly excluding 'SELDOMpy.examples.MAPK' via 2023-08-21T16:59:59,275 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-08-21T16:59:59,276 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-08-21T16:59:59,276 combination with a more fine grained `package-data` configuration. 2023-08-21T16:59:59,277 You can read more about "package data files" on setuptools documentation page: 2023-08-21T16:59:59,277 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-08-21T16:59:59,278 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-08-21T16:59:59,278 even if it does not contain any `.py` files. 2023-08-21T16:59:59,279 On the other hand, currently there is no concept of package data 2023-08-21T16:59:59,279 directory, all directories are treated like packages. 2023-08-21T16:59:59,279 ******************************************************************************** 2023-08-21T16:59:59,280 !! 2023-08-21T16:59:59,280 check.warn(importable) 2023-08-21T16:59:59,281 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SELDOMpy.examples.SP' is absent from the `packages` configuration. 2023-08-21T16:59:59,281 !! 2023-08-21T16:59:59,282 ******************************************************************************** 2023-08-21T16:59:59,282 ############################ 2023-08-21T16:59:59,282 # Package would be ignored # 2023-08-21T16:59:59,283 ############################ 2023-08-21T16:59:59,283 Python recognizes 'SELDOMpy.examples.SP' as an importable package[^1], 2023-08-21T16:59:59,283 but it is absent from setuptools' `packages` configuration. 2023-08-21T16:59:59,284 This leads to an ambiguous overall configuration. If you want to distribute this 2023-08-21T16:59:59,284 package, please make sure that 'SELDOMpy.examples.SP' is explicitly added 2023-08-21T16:59:59,285 to the `packages` configuration field. 2023-08-21T16:59:59,285 Alternatively, you can also rely on setuptools' discovery methods 2023-08-21T16:59:59,285 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-08-21T16:59:59,286 instead of `find_packages(...)`/`find:`). 2023-08-21T16:59:59,286 You can read more about "package discovery" on setuptools documentation page: 2023-08-21T16:59:59,287 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-08-21T16:59:59,287 If you don't want 'SELDOMpy.examples.SP' to be distributed and are 2023-08-21T16:59:59,288 already explicitly excluding 'SELDOMpy.examples.SP' via 2023-08-21T16:59:59,288 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-08-21T16:59:59,288 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-08-21T16:59:59,289 combination with a more fine grained `package-data` configuration. 2023-08-21T16:59:59,289 You can read more about "package data files" on setuptools documentation page: 2023-08-21T16:59:59,290 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-08-21T16:59:59,291 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-08-21T16:59:59,291 even if it does not contain any `.py` files. 2023-08-21T16:59:59,291 On the other hand, currently there is no concept of package data 2023-08-21T16:59:59,292 directory, all directories are treated like packages. 2023-08-21T16:59:59,292 ******************************************************************************** 2023-08-21T16:59:59,292 !! 2023-08-21T16:59:59,293 check.warn(importable) 2023-08-21T16:59:59,293 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SELDOMpy.functions' is absent from the `packages` configuration. 2023-08-21T16:59:59,293 !! 2023-08-21T16:59:59,294 ******************************************************************************** 2023-08-21T16:59:59,294 ############################ 2023-08-21T16:59:59,295 # Package would be ignored # 2023-08-21T16:59:59,295 ############################ 2023-08-21T16:59:59,295 Python recognizes 'SELDOMpy.functions' as an importable package[^1], 2023-08-21T16:59:59,295 but it is absent from setuptools' `packages` configuration. 2023-08-21T16:59:59,296 This leads to an ambiguous overall configuration. If you want to distribute this 2023-08-21T16:59:59,296 package, please make sure that 'SELDOMpy.functions' is explicitly added 2023-08-21T16:59:59,297 to the `packages` configuration field. 2023-08-21T16:59:59,297 Alternatively, you can also rely on setuptools' discovery methods 2023-08-21T16:59:59,297 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-08-21T16:59:59,298 instead of `find_packages(...)`/`find:`). 2023-08-21T16:59:59,298 You can read more about "package discovery" on setuptools documentation page: 2023-08-21T16:59:59,299 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-08-21T16:59:59,299 If you don't want 'SELDOMpy.functions' to be distributed and are 2023-08-21T16:59:59,300 already explicitly excluding 'SELDOMpy.functions' via 2023-08-21T16:59:59,300 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-08-21T16:59:59,300 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-08-21T16:59:59,301 combination with a more fine grained `package-data` configuration. 2023-08-21T16:59:59,301 You can read more about "package data files" on setuptools documentation page: 2023-08-21T16:59:59,302 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-08-21T16:59:59,303 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-08-21T16:59:59,303 even if it does not contain any `.py` files. 2023-08-21T16:59:59,303 On the other hand, currently there is no concept of package data 2023-08-21T16:59:59,304 directory, all directories are treated like packages. 2023-08-21T16:59:59,304 ******************************************************************************** 2023-08-21T16:59:59,304 !! 2023-08-21T16:59:59,305 check.warn(importable) 2023-08-21T16:59:59,305 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SELDOMpy.src.include.include_amigo' is absent from the `packages` configuration. 2023-08-21T16:59:59,305 !! 2023-08-21T16:59:59,306 ******************************************************************************** 2023-08-21T16:59:59,306 ############################ 2023-08-21T16:59:59,306 # Package would be ignored # 2023-08-21T16:59:59,307 ############################ 2023-08-21T16:59:59,307 Python recognizes 'SELDOMpy.src.include.include_amigo' as an importable package[^1], 2023-08-21T16:59:59,307 but it is absent from setuptools' `packages` configuration. 2023-08-21T16:59:59,308 This leads to an ambiguous overall configuration. If you want to distribute this 2023-08-21T16:59:59,308 package, please make sure that 'SELDOMpy.src.include.include_amigo' is explicitly added 2023-08-21T16:59:59,309 to the `packages` configuration field. 2023-08-21T16:59:59,309 Alternatively, you can also rely on setuptools' discovery methods 2023-08-21T16:59:59,309 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-08-21T16:59:59,310 instead of `find_packages(...)`/`find:`). 2023-08-21T16:59:59,310 You can read more about "package discovery" on setuptools documentation page: 2023-08-21T16:59:59,311 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-08-21T16:59:59,312 If you don't want 'SELDOMpy.src.include.include_amigo' to be distributed and are 2023-08-21T16:59:59,312 already explicitly excluding 'SELDOMpy.src.include.include_amigo' via 2023-08-21T16:59:59,312 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-08-21T16:59:59,313 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-08-21T16:59:59,313 combination with a more fine grained `package-data` configuration. 2023-08-21T16:59:59,314 You can read more about "package data files" on setuptools documentation page: 2023-08-21T16:59:59,314 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-08-21T16:59:59,315 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-08-21T16:59:59,316 even if it does not contain any `.py` files. 2023-08-21T16:59:59,316 On the other hand, currently there is no concept of package data 2023-08-21T16:59:59,316 directory, all directories are treated like packages. 2023-08-21T16:59:59,317 ******************************************************************************** 2023-08-21T16:59:59,317 !! 2023-08-21T16:59:59,318 check.warn(importable) 2023-08-21T16:59:59,318 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SELDOMpy.src.include.include_cvodes.cvodes' is absent from the `packages` configuration. 2023-08-21T16:59:59,318 !! 2023-08-21T16:59:59,319 ******************************************************************************** 2023-08-21T16:59:59,319 ############################ 2023-08-21T16:59:59,320 # Package would be ignored # 2023-08-21T16:59:59,320 ############################ 2023-08-21T16:59:59,320 Python recognizes 'SELDOMpy.src.include.include_cvodes.cvodes' as an importable package[^1], 2023-08-21T16:59:59,321 but it is absent from setuptools' `packages` configuration. 2023-08-21T16:59:59,321 This leads to an ambiguous overall configuration. If you want to distribute this 2023-08-21T16:59:59,322 package, please make sure that 'SELDOMpy.src.include.include_cvodes.cvodes' is explicitly added 2023-08-21T16:59:59,322 to the `packages` configuration field. 2023-08-21T16:59:59,323 Alternatively, you can also rely on setuptools' discovery methods 2023-08-21T16:59:59,323 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-08-21T16:59:59,323 instead of `find_packages(...)`/`find:`). 2023-08-21T16:59:59,324 You can read more about "package discovery" on setuptools documentation page: 2023-08-21T16:59:59,324 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-08-21T16:59:59,325 If you don't want 'SELDOMpy.src.include.include_cvodes.cvodes' to be distributed and are 2023-08-21T16:59:59,325 already explicitly excluding 'SELDOMpy.src.include.include_cvodes.cvodes' via 2023-08-21T16:59:59,326 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-08-21T16:59:59,326 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-08-21T16:59:59,326 combination with a more fine grained `package-data` configuration. 2023-08-21T16:59:59,327 You can read more about "package data files" on setuptools documentation page: 2023-08-21T16:59:59,328 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-08-21T16:59:59,329 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-08-21T16:59:59,329 even if it does not contain any `.py` files. 2023-08-21T16:59:59,329 On the other hand, currently there is no concept of package data 2023-08-21T16:59:59,330 directory, all directories are treated like packages. 2023-08-21T16:59:59,330 ******************************************************************************** 2023-08-21T16:59:59,331 !! 2023-08-21T16:59:59,331 check.warn(importable) 2023-08-21T16:59:59,331 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SELDOMpy.src.include.include_cvodes.nvector' is absent from the `packages` configuration. 2023-08-21T16:59:59,332 !! 2023-08-21T16:59:59,332 ******************************************************************************** 2023-08-21T16:59:59,333 ############################ 2023-08-21T16:59:59,334 # Package would be ignored # 2023-08-21T16:59:59,334 ############################ 2023-08-21T16:59:59,334 Python recognizes 'SELDOMpy.src.include.include_cvodes.nvector' as an importable package[^1], 2023-08-21T16:59:59,335 but it is absent from setuptools' `packages` configuration. 2023-08-21T16:59:59,335 This leads to an ambiguous overall configuration. If you want to distribute this 2023-08-21T16:59:59,335 package, please make sure that 'SELDOMpy.src.include.include_cvodes.nvector' is explicitly added 2023-08-21T16:59:59,336 to the `packages` configuration field. 2023-08-21T16:59:59,336 Alternatively, you can also rely on setuptools' discovery methods 2023-08-21T16:59:59,337 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-08-21T16:59:59,337 instead of `find_packages(...)`/`find:`). 2023-08-21T16:59:59,338 You can read more about "package discovery" on setuptools documentation page: 2023-08-21T16:59:59,338 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-08-21T16:59:59,339 If you don't want 'SELDOMpy.src.include.include_cvodes.nvector' to be distributed and are 2023-08-21T16:59:59,339 already explicitly excluding 'SELDOMpy.src.include.include_cvodes.nvector' via 2023-08-21T16:59:59,340 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-08-21T16:59:59,340 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-08-21T16:59:59,340 combination with a more fine grained `package-data` configuration. 2023-08-21T16:59:59,341 You can read more about "package data files" on setuptools documentation page: 2023-08-21T16:59:59,342 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-08-21T16:59:59,343 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-08-21T16:59:59,343 even if it does not contain any `.py` files. 2023-08-21T16:59:59,343 On the other hand, currently there is no concept of package data 2023-08-21T16:59:59,344 directory, all directories are treated like packages. 2023-08-21T16:59:59,344 ******************************************************************************** 2023-08-21T16:59:59,345 !! 2023-08-21T16:59:59,345 check.warn(importable) 2023-08-21T16:59:59,345 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'SELDOMpy.src.include.include_cvodes.sundials' is absent from the `packages` configuration. 2023-08-21T16:59:59,346 !! 2023-08-21T16:59:59,346 ******************************************************************************** 2023-08-21T16:59:59,346 ############################ 2023-08-21T16:59:59,347 # Package would be ignored # 2023-08-21T16:59:59,347 ############################ 2023-08-21T16:59:59,347 Python recognizes 'SELDOMpy.src.include.include_cvodes.sundials' as an importable package[^1], 2023-08-21T16:59:59,348 but it is absent from setuptools' `packages` configuration. 2023-08-21T16:59:59,348 This leads to an ambiguous overall configuration. If you want to distribute this 2023-08-21T16:59:59,349 package, please make sure that 'SELDOMpy.src.include.include_cvodes.sundials' is explicitly added 2023-08-21T16:59:59,349 to the `packages` configuration field. 2023-08-21T16:59:59,350 Alternatively, you can also rely on setuptools' discovery methods 2023-08-21T16:59:59,350 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-08-21T16:59:59,350 instead of `find_packages(...)`/`find:`). 2023-08-21T16:59:59,351 You can read more about "package discovery" on setuptools documentation page: 2023-08-21T16:59:59,352 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-08-21T16:59:59,352 If you don't want 'SELDOMpy.src.include.include_cvodes.sundials' to be distributed and are 2023-08-21T16:59:59,352 already explicitly excluding 'SELDOMpy.src.include.include_cvodes.sundials' via 2023-08-21T16:59:59,353 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-08-21T16:59:59,353 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-08-21T16:59:59,353 combination with a more fine grained `package-data` configuration. 2023-08-21T16:59:59,354 You can read more about "package data files" on setuptools documentation page: 2023-08-21T16:59:59,355 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-08-21T16:59:59,356 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-08-21T16:59:59,356 even if it does not contain any `.py` files. 2023-08-21T16:59:59,356 On the other hand, currently there is no concept of package data 2023-08-21T16:59:59,357 directory, all directories are treated like packages. 2023-08-21T16:59:59,357 ******************************************************************************** 2023-08-21T16:59:59,358 !! 2023-08-21T16:59:59,358 check.warn(importable) 2023-08-21T16:59:59,358 creating build/lib.linux-armv7l-cpython-37/SELDOMpy/examples 2023-08-21T16:59:59,359 creating build/lib.linux-armv7l-cpython-37/SELDOMpy/examples/MAPK 2023-08-21T16:59:59,359 copying SELDOMpy/examples/MAPK/MAPK.xlsx -> build/lib.linux-armv7l-cpython-37/SELDOMpy/examples/MAPK 2023-08-21T16:59:59,359 copying SELDOMpy/examples/MAPK/MAPK_training_and_reduce.py -> build/lib.linux-armv7l-cpython-37/SELDOMpy/examples/MAPK 2023-08-21T16:59:59,360 copying SELDOMpy/examples/MAPK/MAPK_training_and_reduce_pyPESTO.py -> build/lib.linux-armv7l-cpython-37/SELDOMpy/examples/MAPK 2023-08-21T16:59:59,360 creating build/lib.linux-armv7l-cpython-37/SELDOMpy/examples/SP 2023-08-21T16:59:59,360 copying SELDOMpy/examples/SP/SP.xlsx -> build/lib.linux-armv7l-cpython-37/SELDOMpy/examples/SP 2023-08-21T16:59:59,361 copying SELDOMpy/examples/SP/SP_training_and_reduce.py -> build/lib.linux-armv7l-cpython-37/SELDOMpy/examples/SP 2023-08-21T16:59:59,361 copying SELDOMpy/examples/SP/SP_training_and_reduce_pyPESTO.py -> build/lib.linux-armv7l-cpython-37/SELDOMpy/examples/SP 2023-08-21T16:59:59,361 creating build/lib.linux-armv7l-cpython-37/SELDOMpy/functions 2023-08-21T16:59:59,362 copying SELDOMpy/functions/buildmim.py -> build/lib.linux-armv7l-cpython-37/SELDOMpy/functions 2023-08-21T16:59:59,362 copying SELDOMpy/functions/extras.py -> build/lib.linux-armv7l-cpython-37/SELDOMpy/functions 2023-08-21T16:59:59,362 copying SELDOMpy/functions/gen_exps.py -> build/lib.linux-armv7l-cpython-37/SELDOMpy/functions 2023-08-21T16:59:59,363 copying SELDOMpy/functions/getLBODEmodel.py -> build/lib.linux-armv7l-cpython-37/SELDOMpy/functions 2023-08-21T16:59:59,368 copying SELDOMpy/functions/getRandomLBODEmodel.py -> build/lib.linux-armv7l-cpython-37/SELDOMpy/functions 2023-08-21T16:59:59,372 copying SELDOMpy/functions/optimization.py -> build/lib.linux-armv7l-cpython-37/SELDOMpy/functions 2023-08-21T16:59:59,377 copying SELDOMpy/functions/plot_results.py -> build/lib.linux-armv7l-cpython-37/SELDOMpy/functions 2023-08-21T16:59:59,381 copying SELDOMpy/functions/reduce_fun.py -> build/lib.linux-armv7l-cpython-37/SELDOMpy/functions 2023-08-21T16:59:59,385 copying SELDOMpy/functions/simulate_logic_based_ode.py -> build/lib.linux-armv7l-cpython-37/SELDOMpy/functions 2023-08-21T16:59:59,389 copying SELDOMpy/functions/simulate_logic_based_ode_obs.py -> build/lib.linux-armv7l-cpython-37/SELDOMpy/functions 2023-08-21T16:59:59,393 copying SELDOMpy/src/AMIGO_model.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,398 copying SELDOMpy/src/AMIGO_model_stats.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,402 copying SELDOMpy/src/AMIGO_problem.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,407 copying SELDOMpy/src/CNOStructure.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,411 copying SELDOMpy/src/anODEModel.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,415 copying SELDOMpy/src/cvodea.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,424 copying SELDOMpy/src/cvodea_io.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,429 copying SELDOMpy/src/cvodes.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,447 copying SELDOMpy/src/cvodes_band.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,452 copying SELDOMpy/src/cvodes_bandpre.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,458 copying SELDOMpy/src/cvodes_bandpre_impl.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,462 copying SELDOMpy/src/cvodes_bbdpre.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,467 copying SELDOMpy/src/cvodes_bbdpre_impl.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,472 copying SELDOMpy/src/cvodes_dense.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,477 copying SELDOMpy/src/cvodes_diag.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,482 copying SELDOMpy/src/cvodes_diag_impl.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,486 copying SELDOMpy/src/cvodes_direct.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,492 copying SELDOMpy/src/cvodes_direct_impl.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,497 copying SELDOMpy/src/cvodes_impl.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,504 copying SELDOMpy/src/cvodes_io.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,510 copying SELDOMpy/src/cvodes_spbcgs.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,515 copying SELDOMpy/src/cvodes_spgmr.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,520 copying SELDOMpy/src/cvodes_spils.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,526 copying SELDOMpy/src/cvodes_spils_impl.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,531 copying SELDOMpy/src/cvodes_sptfqmr.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,537 copying SELDOMpy/src/decimal2binary.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,541 copying SELDOMpy/src/dhc.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,545 copying SELDOMpy/src/findStates.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,549 copying SELDOMpy/src/fnvector_serial.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,553 copying SELDOMpy/src/fnvector_serial.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,557 copying SELDOMpy/src/getAdjacencyMatrix.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,561 copying SELDOMpy/src/getNumBits.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,565 copying SELDOMpy/src/getNumInputs.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,569 copying SELDOMpy/src/getStateIndex.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,573 copying SELDOMpy/src/getTruthTables.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,577 copying SELDOMpy/src/get_count_bits.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,580 copying SELDOMpy/src/get_input_index.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,584 copying SELDOMpy/src/get_support_truth_tables.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,588 copying SELDOMpy/src/get_truth_tables_index.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,592 copying SELDOMpy/src/hill_function.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,596 copying SELDOMpy/src/linear_transfer_function.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,600 copying SELDOMpy/src/normHill.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,604 copying SELDOMpy/src/nvector_serial.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,609 copying SELDOMpy/src/printAdjMat.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,613 copying SELDOMpy/src/printInterMat.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,617 copying SELDOMpy/src/printNminiTerms.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,621 copying SELDOMpy/src/printTruthTables.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,625 copying SELDOMpy/src/sim_logic_ode.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,630 copying SELDOMpy/src/simulate_amigo_model.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,635 copying SELDOMpy/src/sundials_band.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,639 copying SELDOMpy/src/sundials_dense.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,644 copying SELDOMpy/src/sundials_direct.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,648 copying SELDOMpy/src/sundials_iterative.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,653 copying SELDOMpy/src/sundials_math.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,657 copying SELDOMpy/src/sundials_nvector.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,661 copying SELDOMpy/src/sundials_spbcgs.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,666 copying SELDOMpy/src/sundials_spgmr.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,671 copying SELDOMpy/src/sundials_sptfqmr.c -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,676 creating build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include 2023-08-21T16:59:59,677 creating build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_amigo 2023-08-21T16:59:59,679 copying SELDOMpy/src/include/include_amigo/AMIGO_hdf5.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_amigo 2023-08-21T16:59:59,684 copying SELDOMpy/src/include/include_amigo/AMIGO_model.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_amigo 2023-08-21T16:59:59,688 copying SELDOMpy/src/include/include_amigo/AMIGO_model_stats.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_amigo 2023-08-21T16:59:59,692 copying SELDOMpy/src/include/include_amigo/AMIGO_problem.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_amigo 2023-08-21T16:59:59,696 copying SELDOMpy/src/include/include_amigo/amigoJAC.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_amigo 2023-08-21T16:59:59,700 copying SELDOMpy/src/include/include_amigo/amigoRHS.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_amigo 2023-08-21T16:59:59,704 copying SELDOMpy/src/include/include_amigo/amigoSensRHS.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_amigo 2023-08-21T16:59:59,707 copying SELDOMpy/src/include/include_amigo/simulate_amigo_model.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_amigo 2023-08-21T16:59:59,712 creating build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes 2023-08-21T16:59:59,712 creating build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/cvodes 2023-08-21T16:59:59,715 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/cvodes 2023-08-21T16:59:59,723 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_band.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/cvodes 2023-08-21T16:59:59,728 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_bandpre.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/cvodes 2023-08-21T16:59:59,732 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_bbdpre.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/cvodes 2023-08-21T16:59:59,737 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_dense.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/cvodes 2023-08-21T16:59:59,741 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_diag.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/cvodes 2023-08-21T16:59:59,746 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_direct.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/cvodes 2023-08-21T16:59:59,751 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_lapack.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/cvodes 2023-08-21T16:59:59,755 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_spbcgs.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/cvodes 2023-08-21T16:59:59,760 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_spgmr.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/cvodes 2023-08-21T16:59:59,764 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_spils.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/cvodes 2023-08-21T16:59:59,769 copying SELDOMpy/src/include/include_cvodes/cvodes/cvodes_sptfqmr.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/cvodes 2023-08-21T16:59:59,773 creating build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/nvector 2023-08-21T16:59:59,775 copying SELDOMpy/src/include/include_cvodes/nvector/nvector_serial.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/nvector 2023-08-21T16:59:59,780 creating build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/sundials 2023-08-21T16:59:59,782 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_band.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/sundials 2023-08-21T16:59:59,787 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_config.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/sundials 2023-08-21T16:59:59,791 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_dense.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/sundials 2023-08-21T16:59:59,796 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_direct.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/sundials 2023-08-21T16:59:59,801 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_fnvector.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/sundials 2023-08-21T16:59:59,806 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_iterative.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/sundials 2023-08-21T16:59:59,812 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_lapack.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/sundials 2023-08-21T16:59:59,817 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_math.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/sundials 2023-08-21T16:59:59,823 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_nvector.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/sundials 2023-08-21T16:59:59,829 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_spbcgs.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/sundials 2023-08-21T16:59:59,835 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_spgmr.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/sundials 2023-08-21T16:59:59,839 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_sptfqmr.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/sundials 2023-08-21T16:59:59,844 copying SELDOMpy/src/include/include_cvodes/sundials/sundials_types.h -> build/lib.linux-armv7l-cpython-37/SELDOMpy/src/include/include_cvodes/sundials 2023-08-21T16:59:59,851 running build_ext 2023-08-21T16:59:59,865 building 'hello' extension 2023-08-21T16:59:59,870 creating build/temp.linux-armv7l-cpython-37 2023-08-21T16:59:59,871 creating build/temp.linux-armv7l-cpython-37/SELDOMpy 2023-08-21T16:59:59,872 creating build/temp.linux-armv7l-cpython-37/SELDOMpy/src 2023-08-21T16:59:59,878 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c SELDOMpy/src/AMIGO_model.c -o build/temp.linux-armv7l-cpython-37/SELDOMpy/src/AMIGO_model.o 2023-08-21T17:00:00,239 SELDOMpy/src/AMIGO_model.c: In function ‘simulate_AMIGO_model’: 2023-08-21T17:00:00,240 SELDOMpy/src/AMIGO_model.c:225:1: warning: control reaches end of non-void function [-Wreturn-type] 2023-08-21T17:00:00,240 }; 2023-08-21T17:00:00,240 ^ 2023-08-21T17:00:01,191 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c SELDOMpy/src/AMIGO_model_stats.c -o build/temp.linux-armv7l-cpython-37/SELDOMpy/src/AMIGO_model_stats.o 2023-08-21T17:00:01,293 SELDOMpy/src/AMIGO_model_stats.c:1:9: warning: #pragma once in main file 2023-08-21T17:00:01,293 #pragma once 2023-08-21T17:00:01,294 ^~~~ 2023-08-21T17:00:01,469 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c SELDOMpy/src/AMIGO_problem.c -o build/temp.linux-armv7l-cpython-37/SELDOMpy/src/AMIGO_problem.o 2023-08-21T17:00:01,765 SELDOMpy/src/AMIGO_problem.c: In function ‘eval_AMIGO_problem_LSQ’: 2023-08-21T17:00:01,767 SELDOMpy/src/AMIGO_problem.c:132: warning: ignoring #pragma omp parallel [-Wunknown-pragmas] 2023-08-21T17:00:01,767 #pragma omp parallel num_threads(amigo_problem->nthreads) 2023-08-21T17:00:01,768 SELDOMpy/src/AMIGO_problem.c:134: warning: ignoring #pragma omp for [-Wunknown-pragmas] 2023-08-21T17:00:01,768 #pragma omp for schedule(dynamic,1) private(i) 2023-08-21T17:00:01,772 SELDOMpy/src/AMIGO_problem.c:127:6: warning: unused variable ‘counter’ [-Wunused-variable] 2023-08-21T17:00:01,772 int counter=0; 2023-08-21T17:00:01,772 ^~~~~~~ 2023-08-21T17:00:01,773 SELDOMpy/src/AMIGO_problem.c:126:15: warning: unused variable ‘n_exps’ [-Wunused-variable] 2023-08-21T17:00:01,773 int i, j, k, n_exps, n_times, n_obs; 2023-08-21T17:00:01,773 ^~~~~~ 2023-08-21T17:00:01,774 SELDOMpy/src/AMIGO_problem.c: In function ‘eval_AMIGO_problem_LLK’: 2023-08-21T17:00:01,775 SELDOMpy/src/AMIGO_problem.c:185: warning: ignoring #pragma omp parallel [-Wunknown-pragmas] 2023-08-21T17:00:01,775 #pragma omp parallel num_threads(amigo_problem->nthreads) 2023-08-21T17:00:01,776 SELDOMpy/src/AMIGO_problem.c:187: warning: ignoring #pragma omp for [-Wunknown-pragmas] 2023-08-21T17:00:01,776 #pragma omp for schedule(dynamic,1) private(i,flag) 2023-08-21T17:00:01,779 SELDOMpy/src/AMIGO_problem.c:182:6: warning: unused variable ‘counter’ [-Wunused-variable] 2023-08-21T17:00:01,779 int counter=0; 2023-08-21T17:00:01,780 ^~~~~~~ 2023-08-21T17:00:01,780 SELDOMpy/src/AMIGO_problem.c:181:39: warning: variable ‘flag’ set but not used [-Wunused-but-set-variable] 2023-08-21T17:00:01,781 int i, j, k, n_exps, n_times, n_obs,flag; 2023-08-21T17:00:01,781 ^~~~ 2023-08-21T17:00:01,782 SELDOMpy/src/AMIGO_problem.c:181:16: warning: unused variable ‘n_exps’ [-Wunused-variable] 2023-08-21T17:00:01,782 int i, j, k, n_exps, n_times, n_obs,flag; 2023-08-21T17:00:01,782 ^~~~~~ 2023-08-21T17:00:02,600 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c SELDOMpy/src/anODEModel.c -o build/temp.linux-armv7l-cpython-37/SELDOMpy/src/anODEModel.o 2023-08-21T17:00:02,887 SELDOMpy/src/anODEModel.c: In function ‘amigoRHS’: 2023-08-21T17:00:02,888 SELDOMpy/src/anODEModel.c:23:9: warning: unused variable ‘countBin’ [-Wunused-variable] 2023-08-21T17:00:02,888 int countBin=0; 2023-08-21T17:00:02,889 ^~~~~~~~ 2023-08-21T17:00:02,890 SELDOMpy/src/anODEModel.c: In function ‘amigo_Y_at_tcon’: 2023-08-21T17:00:02,890 SELDOMpy/src/anODEModel.c:118:18: warning: unused variable ‘amigo_model’ [-Wunused-variable] 2023-08-21T17:00:02,891 AMIGO_model* amigo_model=(AMIGO_model*)data; 2023-08-21T17:00:02,891 ^~~~~~~~~~~ 2023-08-21T17:00:03,273 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c SELDOMpy/src/cvodea.c -o build/temp.linux-armv7l-cpython-37/SELDOMpy/src/cvodea.o 2023-08-21T17:00:03,620 SELDOMpy/src/cvodea.c: In function ‘CVAhermiteStorePnt’: 2023-08-21T17:00:03,621 SELDOMpy/src/cvodea.c:2461:11: warning: variable ‘retval’ set but not used [-Wunused-but-set-variable] 2023-08-21T17:00:03,621 int is, retval; 2023-08-21T17:00:03,621 ^~~~~~ 2023-08-21T17:00:03,646 SELDOMpy/src/cvodea.c: In function ‘CVArhsQ’: 2023-08-21T17:00:03,648 SELDOMpy/src/cvodea.c:2957:7: warning: variable ‘flag’ set but not used [-Wunused-but-set-variable] 2023-08-21T17:00:03,649 int flag, retval; 2023-08-21T17:00:03,649 ^~~~ 2023-08-21T17:00:05,309 SELDOMpy/src/cvodea.c: In function ‘CVAhermiteGetY’: 2023-08-21T17:00:05,310 SELDOMpy/src/cvodea.c:2523:19: warning: ‘ySd0’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2023-08-21T17:00:05,311 N_Vector *yS0, *ySd0, *yS1, *ySd1; 2023-08-21T17:00:05,311 ^~~~ 2023-08-21T17:00:05,311 SELDOMpy/src/cvodea.c:2523:13: warning: ‘yS0’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2023-08-21T17:00:05,312 N_Vector *yS0, *ySd0, *yS1, *ySd1; 2023-08-21T17:00:05,312 ^~~ 2023-08-21T17:00:07,489 SELDOMpy/src/cvodea.c: In function ‘CVodeB’: 2023-08-21T17:00:07,490 SELDOMpy/src/cvodea.c:1263:13: warning: ‘flag’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2023-08-21T17:00:07,490 int sign, flag; 2023-08-21T17:00:07,491 ^~~~ 2023-08-21T17:00:08,531 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c SELDOMpy/src/cvodea_io.c -o build/temp.linux-armv7l-cpython-37/SELDOMpy/src/cvodea_io.o 2023-08-21T17:00:09,786 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -flto -fuse-linker-plugin -ffat-lto-objects -fPIC -ISELDOMpy/src/include/include_amigo -ISELDOMpy/src/include/include_cvodes -ISELDOMpy/src -I/usr/local/lib/python3.7/dist-packages/numpy/core/include -I/usr/include/python3.7m -c SELDOMpy/src/cvodes.c -o build/temp.linux-armv7l-cpython-37/SELDOMpy/src/cvodes.o 2023-08-21T17:00:10,186 SELDOMpy/src/cvodes.c: In function ‘cvHin’: 2023-08-21T17:00:10,187 SELDOMpy/src/cvodes.c:4328:7: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2023-08-21T17:00:10,187 if (count1 <= 2) 2023-08-21T17:00:10,188 ^~ 2023-08-21T17:00:10,188 SELDOMpy/src/cvodes.c:4330:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2023-08-21T17:00:10,188 if (retval == QRHSFUNC_RECVR) return(CV_REPTD_QRHSFUNC_ERR); 2023-08-21T17:00:10,189 ^~ 2023-08-21T17:00:10,758 SELDOMpy/src/cvodes.c: In function ‘cvQuadSensRhs1InternalDQ’: 2023-08-21T17:00:10,761 SELDOMpy/src/cvodes.c:8850:20: warning: variable ‘rDeltap’ set but not used [-Wunused-but-set-variable] 2023-08-21T17:00:10,762 realtype Deltap, rDeltap; 2023-08-21T17:00:10,762 ^~~~~~~ 2023-08-21T17:00:10,763 SELDOMpy/src/cvodes.c: In function ‘cvProcessError’: 2023-08-21T17:00:10,764 SELDOMpy/src/cvodes.c:8961:21: error: format not a string literal and no format arguments [-Werror=format-security] 2023-08-21T17:00:10,764 fprintf(stderr, msg); 2023-08-21T17:00:10,765 ^~~ 2023-08-21T17:00:24,203 cc1: some warnings being treated as errors 2023-08-21T17:00:24,228 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2023-08-21T17:00:24,456 ERROR: [present-rich] python setup.py bdist_wheel exited with 1 2023-08-21T17:00:24,501 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2023-08-21T17:00:24,501 exec(compile('"'"''"'"''"'"' 2023-08-21T17:00:24,501 # This is -- a caller that pip uses to run setup.py 2023-08-21T17:00:24,501 # 2023-08-21T17:00:24,501 # - It imports setuptools before invoking setup.py, to enable projects that directly 2023-08-21T17:00:24,501 # import from `distutils.core` to work with newer packaging standards. 2023-08-21T17:00:24,501 # - It provides a clear error message when setuptools is not installed. 2023-08-21T17:00:24,501 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2023-08-21T17:00:24,501 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2023-08-21T17:00:24,501 # manifest_maker: standard file '"'"'-c'"'"' not found". 2023-08-21T17:00:24,501 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2023-08-21T17:00:24,501 import os, sys, tokenize 2023-08-21T17:00:24,501 2023-08-21T17:00:24,501 try: 2023-08-21T17:00:24,501 import setuptools 2023-08-21T17:00:24,501 except ImportError as error: 2023-08-21T17:00:24,501 print( 2023-08-21T17:00:24,501 "ERROR: Can not execute `setup.py` since setuptools is not available in " 2023-08-21T17:00:24,501 "the build environment.", 2023-08-21T17:00:24,501 file=sys.stderr, 2023-08-21T17:00:24,501 ) 2023-08-21T17:00:24,501 sys.exit(1) 2023-08-21T17:00:24,501 2023-08-21T17:00:24,501 __file__ = %r 2023-08-21T17:00:24,501 sys.argv[0] = __file__ 2023-08-21T17:00:24,501 2023-08-21T17:00:24,501 if os.path.exists(__file__): 2023-08-21T17:00:24,501 filename = __file__ 2023-08-21T17:00:24,501 with tokenize.open(__file__) as f: 2023-08-21T17:00:24,501 setup_py_code = f.read() 2023-08-21T17:00:24,501 else: 2023-08-21T17:00:24,501 filename = "" 2023-08-21T17:00:24,501 setup_py_code = "from setuptools import setup; setup()" 2023-08-21T17:00:24,501 2023-08-21T17:00:24,501 exec(compile(setup_py_code, filename, "exec")) 2023-08-21T17:00:24,501 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-t482b7fw/seldompy_06f1baad1a584aeaaf0a67fe4f99f98c/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-_myyi4zs[/] 2023-08-21T17:00:24,502 [bold magenta]cwd[/]: /tmp/pip-wheel-t482b7fw/seldompy_06f1baad1a584aeaaf0a67fe4f99f98c/ 2023-08-21T17:00:24,502 Building wheel for seldompy (setup.py): finished with status 'error' 2023-08-21T17:00:24,504 ERROR: Failed building wheel for seldompy 2023-08-21T17:00:24,507 Running setup.py clean for seldompy 2023-08-21T17:00:24,509 Running command python setup.py clean 2023-08-21T17:00:26,274 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/dist.py:755: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-08-21T17:00:26,275 !! 2023-08-21T17:00:26,276 ******************************************************************************** 2023-08-21T17:00:26,277 Usage of dash-separated 'description-file' will not be supported in future 2023-08-21T17:00:26,277 versions. Please use the underscore name 'description_file' instead. 2023-08-21T17:00:26,278 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-08-21T17:00:26,278 or your builds will no longer be supported. 2023-08-21T17:00:26,278 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-08-21T17:00:26,279 ******************************************************************************** 2023-08-21T17:00:26,279 !! 2023-08-21T17:00:26,280 opt = self.warn_dash_deprecation(opt, section) 2023-08-21T17:00:26,690 running clean 2023-08-21T17:00:26,865 removing 'build/temp.linux-armv7l-cpython-37' (and everything under it) 2023-08-21T17:00:26,874 removing 'build/lib.linux-armv7l-cpython-37' (and everything under it) 2023-08-21T17:00:26,960 'build/bdist.linux-armv7l' does not exist -- can't clean it 2023-08-21T17:00:26,961 'build/scripts-3.7' does not exist -- can't clean it 2023-08-21T17:00:26,962 removing 'build' 2023-08-21T17:00:27,129 Failed to build seldompy 2023-08-21T17:00:27,134 ERROR: Failed to build one or more wheels 2023-08-21T17:00:27,137 Exception information: 2023-08-21T17:00:27,137 Traceback (most recent call last): 2023-08-21T17:00:27,137 File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/cli/base_command.py", line 169, in exc_logging_wrapper 2023-08-21T17:00:27,137 status = run_func(*args) 2023-08-21T17:00:27,137 File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-08-21T17:00:27,137 return func(self, options, args) 2023-08-21T17:00:27,137 File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/commands/wheel.py", line 178, in run 2023-08-21T17:00:27,137 raise CommandError("Failed to build one or more wheels") 2023-08-21T17:00:27,137 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2023-08-21T17:00:27,143 Removed build tracker: '/tmp/pip-build-tracker-ha0bvddv'