2023-08-24T19:41:19,595 Created temporary directory: /tmp/pip-build-tracker-p__gn6q9
2023-08-24T19:41:19,598 Initialized build tracking at /tmp/pip-build-tracker-p__gn6q9
2023-08-24T19:41:19,598 Created build tracker: /tmp/pip-build-tracker-p__gn6q9
2023-08-24T19:41:19,599 Entered build tracker: /tmp/pip-build-tracker-p__gn6q9
2023-08-24T19:41:19,600 Created temporary directory: /tmp/pip-wheel-i5xrmd7l
2023-08-24T19:41:19,608 Created temporary directory: /tmp/pip-ephem-wheel-cache-tqh827z8
2023-08-24T19:41:19,669 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-08-24T19:41:19,677 2 location(s) to search for versions of gqlib:
2023-08-24T19:41:19,677 * https://pypi.org/simple/gqlib/
2023-08-24T19:41:19,677 * https://www.piwheels.org/simple/gqlib/
2023-08-24T19:41:19,678 Fetching project page and analyzing links: https://pypi.org/simple/gqlib/
2023-08-24T19:41:19,679 Getting page https://pypi.org/simple/gqlib/
2023-08-24T19:41:19,684 Found index url https://pypi.org/simple/
2023-08-24T19:41:19,876 Fetched page https://pypi.org/simple/gqlib/ as application/vnd.pypi.simple.v1+json
2023-08-24T19:41:19,879   Found link https://files.pythonhosted.org/packages/a5/26/1fb85708574f429a67cf7ebd09819706893e408c693c867248098c8b6bb2/gqlib-2.9.9.3.tar.gz (from https://pypi.org/simple/gqlib/), version: 2.9.9.3
2023-08-24T19:41:19,880   Found link https://files.pythonhosted.org/packages/0d/5a/694f5a2ea4ee7048c32cdd2cb69c7f4835e5d8a43328f762434b770b7cfb/gqlib-2.10.0.tar.gz (from https://pypi.org/simple/gqlib/), version: 2.10.0
2023-08-24T19:41:19,881   Found link https://files.pythonhosted.org/packages/18/a3/f599a42c49499622e4dddc2d7b9c699a728dee1ccead4bac6055ae72d9c1/gqlib-2.12.1.tar.gz (from https://pypi.org/simple/gqlib/), version: 2.12.1
2023-08-24T19:41:19,881 Fetching project page and analyzing links: https://www.piwheels.org/simple/gqlib/
2023-08-24T19:41:19,882 Getting page https://www.piwheels.org/simple/gqlib/
2023-08-24T19:41:19,884 Found index url https://www.piwheels.org/simple/
2023-08-24T19:41:20,123 Fetched page https://www.piwheels.org/simple/gqlib/ as text/html
2023-08-24T19:41:20,126   Skipping link: No binaries permitted for gqlib: https://www.piwheels.org/simple/gqlib/gqlib-2.10.0-py3-none-any.whl#sha256=393b7dc20a4d91ae690b4799f687ff2522c749d97cad0f98bf305f2817b1c0ea (from https://www.piwheels.org/simple/gqlib/)
2023-08-24T19:41:20,127   Skipping link: No binaries permitted for gqlib: https://www.piwheels.org/simple/gqlib/gqlib-2.9.9.3-py3-none-any.whl#sha256=2bd1fb961af8b28506ae8b437d5b9e7a5a5f0f88b956679b48a458e056fe35e9 (from https://www.piwheels.org/simple/gqlib/)
2023-08-24T19:41:20,128 Skipping link: not a file: https://www.piwheels.org/simple/gqlib/
2023-08-24T19:41:20,128 Skipping link: not a file: https://pypi.org/simple/gqlib/
2023-08-24T19:41:20,161 Given no hashes to check 1 links for project 'gqlib': discarding no candidates
2023-08-24T19:41:20,192 Collecting gqlib==2.12.1
2023-08-24T19:41:20,196   Created temporary directory: /tmp/pip-unpack-fr03x7i5
2023-08-24T19:41:20,370   Downloading gqlib-2.12.1.tar.gz (74 kB)
2023-08-24T19:41:20,805   Added gqlib==2.12.1 from https://files.pythonhosted.org/packages/18/a3/f599a42c49499622e4dddc2d7b9c699a728dee1ccead4bac6055ae72d9c1/gqlib-2.12.1.tar.gz to build tracker '/tmp/pip-build-tracker-p__gn6q9'
2023-08-24T19:41:20,809   Running setup.py (path:/tmp/pip-wheel-i5xrmd7l/gqlib_f7868ea9dadd4883a0d0dd4ad676cbab/setup.py) egg_info for package gqlib
2023-08-24T19:41:20,811   Created temporary directory: /tmp/pip-pip-egg-info-amay334b
2023-08-24T19:41:20,811   Preparing metadata (setup.py): started
2023-08-24T19:41:20,813   Running command python setup.py egg_info
2023-08-24T19:41:22,618   running egg_info
2023-08-24T19:41:22,621   creating /tmp/pip-pip-egg-info-amay334b/gqlib.egg-info
2023-08-24T19:41:22,724   writing /tmp/pip-pip-egg-info-amay334b/gqlib.egg-info/PKG-INFO
2023-08-24T19:41:22,730   writing dependency_links to /tmp/pip-pip-egg-info-amay334b/gqlib.egg-info/dependency_links.txt
2023-08-24T19:41:22,736   writing requirements to /tmp/pip-pip-egg-info-amay334b/gqlib.egg-info/requires.txt
2023-08-24T19:41:22,738   writing top-level names to /tmp/pip-pip-egg-info-amay334b/gqlib.egg-info/top_level.txt
2023-08-24T19:41:22,741   writing manifest file '/tmp/pip-pip-egg-info-amay334b/gqlib.egg-info/SOURCES.txt'
2023-08-24T19:41:23,083   reading manifest file '/tmp/pip-pip-egg-info-amay334b/gqlib.egg-info/SOURCES.txt'
2023-08-24T19:41:23,087   reading manifest template 'MANIFEST.in'
2023-08-24T19:41:23,089   adding license file 'LICENSE'
2023-08-24T19:41:23,100   writing manifest file '/tmp/pip-pip-egg-info-amay334b/gqlib.egg-info/SOURCES.txt'
2023-08-24T19:41:23,102   /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:755: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-08-24T19:41:23,102   !!

2023-08-24T19:41:23,103           ********************************************************************************
2023-08-24T19:41:23,103           Usage of dash-separated 'description-file' will not be supported in future
2023-08-24T19:41:23,104           versions. Please use the underscore name 'description_file' instead.

2023-08-24T19:41:23,104           By 2023-Sep-26, you need to update your project and remove deprecated calls
2023-08-24T19:41:23,105           or your builds will no longer be supported.

2023-08-24T19:41:23,106           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-08-24T19:41:23,106           ********************************************************************************

2023-08-24T19:41:23,107   !!
2023-08-24T19:41:23,108     opt = self.warn_dash_deprecation(opt, section)
2023-08-24T19:41:23,222   Preparing metadata (setup.py): finished with status 'done'
2023-08-24T19:41:23,234   Source in /tmp/pip-wheel-i5xrmd7l/gqlib_f7868ea9dadd4883a0d0dd4ad676cbab has version 2.12.1, which satisfies requirement gqlib==2.12.1 from https://files.pythonhosted.org/packages/18/a3/f599a42c49499622e4dddc2d7b9c699a728dee1ccead4bac6055ae72d9c1/gqlib-2.12.1.tar.gz
2023-08-24T19:41:23,236   Removed gqlib==2.12.1 from https://files.pythonhosted.org/packages/18/a3/f599a42c49499622e4dddc2d7b9c699a728dee1ccead4bac6055ae72d9c1/gqlib-2.12.1.tar.gz from build tracker '/tmp/pip-build-tracker-p__gn6q9'
2023-08-24T19:41:23,247 Created temporary directory: /tmp/pip-unpack-wc8kafzs
2023-08-24T19:41:23,248 Building wheels for collected packages: gqlib
2023-08-24T19:41:23,257   Created temporary directory: /tmp/pip-wheel-fpio7mj1
2023-08-24T19:41:23,258   Building wheel for gqlib (setup.py): started
2023-08-24T19:41:23,260   Destination directory: /tmp/pip-wheel-fpio7mj1
2023-08-24T19:41:23,260   Running command python setup.py bdist_wheel
2023-08-24T19:41:24,497   /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:755: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-08-24T19:41:24,498   !!

2023-08-24T19:41:24,499           ********************************************************************************
2023-08-24T19:41:24,500           Usage of dash-separated 'description-file' will not be supported in future
2023-08-24T19:41:24,500           versions. Please use the underscore name 'description_file' instead.

2023-08-24T19:41:24,501           By 2023-Sep-26, you need to update your project and remove deprecated calls
2023-08-24T19:41:24,501           or your builds will no longer be supported.

2023-08-24T19:41:24,501           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-08-24T19:41:24,502           ********************************************************************************

2023-08-24T19:41:24,502   !!
2023-08-24T19:41:24,503     opt = self.warn_dash_deprecation(opt, section)
2023-08-24T19:41:25,088   running bdist_wheel
2023-08-24T19:41:25,955   running build
2023-08-24T19:41:25,956   running build_py
2023-08-24T19:41:26,074   creating build
2023-08-24T19:41:26,075   creating build/lib
2023-08-24T19:41:26,077   creating build/lib/gqlib
2023-08-24T19:41:26,079   copying gqlib/__init__.py -> build/lib/gqlib
2023-08-24T19:41:26,084   copying gqlib/__main__.py -> build/lib/gqlib
2023-08-24T19:41:26,088   copying gqlib/handle_args.py -> build/lib/gqlib
2023-08-24T19:41:26,095   creating build/lib/gqlib_old
2023-08-24T19:41:26,097   copying gqlib_old/__init__.py -> build/lib/gqlib_old
2023-08-24T19:41:26,101   copying gqlib_old/__main__.py -> build/lib/gqlib_old
2023-08-24T19:41:26,104   copying gqlib_old/overlap_counter.py -> build/lib/gqlib_old
2023-08-24T19:41:26,110   copying gqlib_old/handle_args.py -> build/lib/gqlib_old
2023-08-24T19:41:26,117   creating build/lib/gqlib/db
2023-08-24T19:41:26,119   copying gqlib/db/gff_dbm.py -> build/lib/gqlib/db
2023-08-24T19:41:26,125   copying gqlib/db/__init__.py -> build/lib/gqlib/db
2023-08-24T19:41:26,129   copying gqlib/db/database.py -> build/lib/gqlib/db
2023-08-24T19:41:26,133   copying gqlib/db/db_import.py -> build/lib/gqlib/db
2023-08-24T19:41:26,138   copying gqlib/db/annotation_db.py -> build/lib/gqlib/db
2023-08-24T19:41:26,144   creating build/lib/gqlib/counters
2023-08-24T19:41:26,146   copying gqlib/counters/alignment_counter.py -> build/lib/gqlib/counters
2023-08-24T19:41:26,149   copying gqlib/counters/region_counter.py -> build/lib/gqlib/counters
2023-08-24T19:41:26,153   copying gqlib/counters/__init__.py -> build/lib/gqlib/counters
2023-08-24T19:41:26,157   copying gqlib/counters/count_manager.py -> build/lib/gqlib/counters
2023-08-24T19:41:26,161   copying gqlib/counters/seq_counter.py -> build/lib/gqlib/counters
2023-08-24T19:41:26,166   creating build/lib/gqlib/profilers
2023-08-24T19:41:26,168   copying gqlib/profilers/gene_quantifier.py -> build/lib/gqlib/profilers
2023-08-24T19:41:26,172   copying gqlib/profilers/__init__.py -> build/lib/gqlib/profilers
2023-08-24T19:41:26,176   copying gqlib/profilers/feature_quantifier.py -> build/lib/gqlib/profilers
2023-08-24T19:41:26,181   copying gqlib/profilers/region_quantifier.py -> build/lib/gqlib/profilers
2023-08-24T19:41:26,186   creating build/lib/gqlib/annotation
2023-08-24T19:41:26,187   copying gqlib/annotation/__init__.py -> build/lib/gqlib/annotation
2023-08-24T19:41:26,191   copying gqlib/annotation/count_writer.py -> build/lib/gqlib/annotation
2023-08-24T19:41:26,196   copying gqlib/annotation/count_annotator.py -> build/lib/gqlib/annotation
2023-08-24T19:41:26,201   creating build/lib/gqlib/alignment
2023-08-24T19:41:26,203   copying gqlib/alignment/aln_group.py -> build/lib/gqlib/alignment
2023-08-24T19:41:26,207   copying gqlib/alignment/bamreader.py -> build/lib/gqlib/alignment
2023-08-24T19:41:26,212   copying gqlib/alignment/pysam_alignment_processor.py -> build/lib/gqlib/alignment
2023-08-24T19:41:26,216   copying gqlib/alignment/__init__.py -> build/lib/gqlib/alignment
2023-08-24T19:41:26,221   creating build/lib/gqlib/bin
2023-08-24T19:41:26,223   copying gqlib/bin/collate_studies.py -> build/lib/gqlib/bin
2023-08-24T19:41:26,227   copying gqlib/bin/db_collate.py -> build/lib/gqlib/bin
2023-08-24T19:41:26,231   copying gqlib/bin/collate_counts.py -> build/lib/gqlib/bin
2023-08-24T19:41:26,236   copying gqlib/bin/build_domain_database.py -> build/lib/gqlib/bin
2023-08-24T19:41:26,240   copying gqlib/bin/split_table.py -> build/lib/gqlib/bin
2023-08-24T19:41:26,244   copying gqlib/bin/build_custom_database.py -> build/lib/gqlib/bin
2023-08-24T19:41:26,248   copying gqlib/bin/__init__.py -> build/lib/gqlib/bin
2023-08-24T19:41:26,252   copying gqlib/bin/build_gene_database.py -> build/lib/gqlib/bin
2023-08-24T19:41:26,256   copying gqlib/bin/build_bed_database.py -> build/lib/gqlib/bin
2023-08-24T19:41:26,262   creating build/lib/gqlib/db/models
2023-08-24T19:41:26,264   copying gqlib/db/models/__init__.py -> build/lib/gqlib/db/models
2023-08-24T19:41:26,267   copying gqlib/db/models/meta.py -> build/lib/gqlib/db/models
2023-08-24T19:41:26,271   copying gqlib/db/models/db.py -> build/lib/gqlib/db/models
2023-08-24T19:41:26,276   creating build/lib/gqlib_old/db
2023-08-24T19:41:26,278   copying gqlib_old/db/gff_dbm.py -> build/lib/gqlib_old/db
2023-08-24T19:41:26,283   copying gqlib_old/db/__init__.py -> build/lib/gqlib_old/db
2023-08-24T19:41:26,286   copying gqlib_old/db/database.py -> build/lib/gqlib_old/db
2023-08-24T19:41:26,290   copying gqlib_old/db/db_import.py -> build/lib/gqlib_old/db
2023-08-24T19:41:26,296   copying gqlib_old/db/annotation_db.py -> build/lib/gqlib_old/db
2023-08-24T19:41:26,303   creating build/lib/gqlib_old/counters
2023-08-24T19:41:26,305   copying gqlib_old/counters/alignment_counter.py -> build/lib/gqlib_old/counters
2023-08-24T19:41:26,309   copying gqlib_old/counters/region_counter.py -> build/lib/gqlib_old/counters
2023-08-24T19:41:26,312   copying gqlib_old/counters/__init__.py -> build/lib/gqlib_old/counters
2023-08-24T19:41:26,316   copying gqlib_old/counters/coverage_counter.py -> build/lib/gqlib_old/counters
2023-08-24T19:41:26,319   copying gqlib_old/counters/count_manager.py -> build/lib/gqlib_old/counters
2023-08-24T19:41:26,324   copying gqlib_old/counters/seq_counter.py -> build/lib/gqlib_old/counters
2023-08-24T19:41:26,329   creating build/lib/gqlib_old/profilers
2023-08-24T19:41:26,331   copying gqlib_old/profilers/gene_quantifier.py -> build/lib/gqlib_old/profilers
2023-08-24T19:41:26,335   copying gqlib_old/profilers/__init__.py -> build/lib/gqlib_old/profilers
2023-08-24T19:41:26,339   copying gqlib_old/profilers/feature_quantifier.py -> build/lib/gqlib_old/profilers
2023-08-24T19:41:26,343   copying gqlib_old/profilers/region_quantifier.py -> build/lib/gqlib_old/profilers
2023-08-24T19:41:26,348   creating build/lib/gqlib_old/annotation
2023-08-24T19:41:26,350   copying gqlib_old/annotation/__init__.py -> build/lib/gqlib_old/annotation
2023-08-24T19:41:26,354   copying gqlib_old/annotation/count_writer.py -> build/lib/gqlib_old/annotation
2023-08-24T19:41:26,359   copying gqlib_old/annotation/count_annotator.py -> build/lib/gqlib_old/annotation
2023-08-24T19:41:26,365   creating build/lib/gqlib_old/alignment
2023-08-24T19:41:26,367   copying gqlib_old/alignment/aln_group.py -> build/lib/gqlib_old/alignment
2023-08-24T19:41:26,371   copying gqlib_old/alignment/bamreader.py -> build/lib/gqlib_old/alignment
2023-08-24T19:41:26,376   copying gqlib_old/alignment/pysam_alignment_processor.py -> build/lib/gqlib_old/alignment
2023-08-24T19:41:26,380   copying gqlib_old/alignment/__init__.py -> build/lib/gqlib_old/alignment
2023-08-24T19:41:26,385   creating build/lib/gqlib_old/bin
2023-08-24T19:41:26,388   copying gqlib_old/bin/collate_studies.py -> build/lib/gqlib_old/bin
2023-08-24T19:41:26,392   copying gqlib_old/bin/collate_counts.py -> build/lib/gqlib_old/bin
2023-08-24T19:41:26,396   copying gqlib_old/bin/build_domain_database.py -> build/lib/gqlib_old/bin
2023-08-24T19:41:26,401   copying gqlib_old/bin/split_table.py -> build/lib/gqlib_old/bin
2023-08-24T19:41:26,404   copying gqlib_old/bin/build_custom_database.py -> build/lib/gqlib_old/bin
2023-08-24T19:41:26,409   copying gqlib_old/bin/__init__.py -> build/lib/gqlib_old/bin
2023-08-24T19:41:26,412   copying gqlib_old/bin/build_gene_database.py -> build/lib/gqlib_old/bin
2023-08-24T19:41:26,416   copying gqlib_old/bin/build_bed_database.py -> build/lib/gqlib_old/bin
2023-08-24T19:41:26,422   creating build/lib/gqlib_old/db/models
2023-08-24T19:41:26,423   copying gqlib_old/db/models/__init__.py -> build/lib/gqlib_old/db/models
2023-08-24T19:41:26,427   copying gqlib_old/db/models/meta.py -> build/lib/gqlib_old/db/models
2023-08-24T19:41:26,430   copying gqlib_old/db/models/db.py -> build/lib/gqlib_old/db/models
2023-08-24T19:41:26,433   running egg_info
2023-08-24T19:41:26,656   writing gqlib.egg-info/PKG-INFO
2023-08-24T19:41:26,660   writing dependency_links to gqlib.egg-info/dependency_links.txt
2023-08-24T19:41:26,664   writing requirements to gqlib.egg-info/requires.txt
2023-08-24T19:41:26,667   writing top-level names to gqlib.egg-info/top_level.txt
2023-08-24T19:41:26,797   reading manifest file 'gqlib.egg-info/SOURCES.txt'
2023-08-24T19:41:26,805   reading manifest template 'MANIFEST.in'
2023-08-24T19:41:26,807   adding license file 'LICENSE'
2023-08-24T19:41:26,821   writing manifest file 'gqlib.egg-info/SOURCES.txt'
2023-08-24T19:41:26,961   /usr/local/lib/python3.7/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-08-24T19:41:26,962   !!

2023-08-24T19:41:26,962           ********************************************************************************
2023-08-24T19:41:26,963           Please avoid running ``setup.py`` directly.
2023-08-24T19:41:26,963           Instead, use pypa/build, pypa/installer, pypa/build or
2023-08-24T19:41:26,963           other standards-based tools.

2023-08-24T19:41:26,964           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-08-24T19:41:26,964           ********************************************************************************

2023-08-24T19:41:26,965   !!
2023-08-24T19:41:26,965     self.initialize_options()
2023-08-24T19:41:27,068   installing to build/bdist.linux-armv7l/wheel
2023-08-24T19:41:27,068   running install
2023-08-24T19:41:27,127   running install_lib
2023-08-24T19:41:27,235   creating build/bdist.linux-armv7l
2023-08-24T19:41:27,236   creating build/bdist.linux-armv7l/wheel
2023-08-24T19:41:27,240   creating build/bdist.linux-armv7l/wheel/gqlib
2023-08-24T19:41:27,243   creating build/bdist.linux-armv7l/wheel/gqlib/db
2023-08-24T19:41:27,247   creating build/bdist.linux-armv7l/wheel/gqlib/db/models
2023-08-24T19:41:27,249   copying build/lib/gqlib/db/models/__init__.py -> build/bdist.linux-armv7l/wheel/gqlib/db/models
2023-08-24T19:41:27,252   copying build/lib/gqlib/db/models/meta.py -> build/bdist.linux-armv7l/wheel/gqlib/db/models
2023-08-24T19:41:27,256   copying build/lib/gqlib/db/models/db.py -> build/bdist.linux-armv7l/wheel/gqlib/db/models
2023-08-24T19:41:27,260   copying build/lib/gqlib/db/gff_dbm.py -> build/bdist.linux-armv7l/wheel/gqlib/db
2023-08-24T19:41:27,264   copying build/lib/gqlib/db/__init__.py -> build/bdist.linux-armv7l/wheel/gqlib/db
2023-08-24T19:41:27,268   copying build/lib/gqlib/db/database.py -> build/bdist.linux-armv7l/wheel/gqlib/db
2023-08-24T19:41:27,271   copying build/lib/gqlib/db/db_import.py -> build/bdist.linux-armv7l/wheel/gqlib/db
2023-08-24T19:41:27,275   copying build/lib/gqlib/db/annotation_db.py -> build/bdist.linux-armv7l/wheel/gqlib/db
2023-08-24T19:41:27,281   creating build/bdist.linux-armv7l/wheel/gqlib/counters
2023-08-24T19:41:27,283   copying build/lib/gqlib/counters/alignment_counter.py -> build/bdist.linux-armv7l/wheel/gqlib/counters
2023-08-24T19:41:27,287   copying build/lib/gqlib/counters/region_counter.py -> build/bdist.linux-armv7l/wheel/gqlib/counters
2023-08-24T19:41:27,290   copying build/lib/gqlib/counters/__init__.py -> build/bdist.linux-armv7l/wheel/gqlib/counters
2023-08-24T19:41:27,294   copying build/lib/gqlib/counters/count_manager.py -> build/bdist.linux-armv7l/wheel/gqlib/counters
2023-08-24T19:41:27,298   copying build/lib/gqlib/counters/seq_counter.py -> build/bdist.linux-armv7l/wheel/gqlib/counters
2023-08-24T19:41:27,302   copying build/lib/gqlib/__init__.py -> build/bdist.linux-armv7l/wheel/gqlib
2023-08-24T19:41:27,306   copying build/lib/gqlib/__main__.py -> build/bdist.linux-armv7l/wheel/gqlib
2023-08-24T19:41:27,311   creating build/bdist.linux-armv7l/wheel/gqlib/profilers
2023-08-24T19:41:27,313   copying build/lib/gqlib/profilers/gene_quantifier.py -> build/bdist.linux-armv7l/wheel/gqlib/profilers
2023-08-24T19:41:27,317   copying build/lib/gqlib/profilers/__init__.py -> build/bdist.linux-armv7l/wheel/gqlib/profilers
2023-08-24T19:41:27,320   copying build/lib/gqlib/profilers/feature_quantifier.py -> build/bdist.linux-armv7l/wheel/gqlib/profilers
2023-08-24T19:41:27,325   copying build/lib/gqlib/profilers/region_quantifier.py -> build/bdist.linux-armv7l/wheel/gqlib/profilers
2023-08-24T19:41:27,330   creating build/bdist.linux-armv7l/wheel/gqlib/annotation
2023-08-24T19:41:27,331   copying build/lib/gqlib/annotation/__init__.py -> build/bdist.linux-armv7l/wheel/gqlib/annotation
2023-08-24T19:41:27,335   copying build/lib/gqlib/annotation/count_writer.py -> build/bdist.linux-armv7l/wheel/gqlib/annotation
2023-08-24T19:41:27,340   copying build/lib/gqlib/annotation/count_annotator.py -> build/bdist.linux-armv7l/wheel/gqlib/annotation
2023-08-24T19:41:27,344   copying build/lib/gqlib/handle_args.py -> build/bdist.linux-armv7l/wheel/gqlib
2023-08-24T19:41:27,350   creating build/bdist.linux-armv7l/wheel/gqlib/alignment
2023-08-24T19:41:27,352   copying build/lib/gqlib/alignment/aln_group.py -> build/bdist.linux-armv7l/wheel/gqlib/alignment
2023-08-24T19:41:27,355   copying build/lib/gqlib/alignment/bamreader.py -> build/bdist.linux-armv7l/wheel/gqlib/alignment
2023-08-24T19:41:27,360   copying build/lib/gqlib/alignment/pysam_alignment_processor.py -> build/bdist.linux-armv7l/wheel/gqlib/alignment
2023-08-24T19:41:27,364   copying build/lib/gqlib/alignment/__init__.py -> build/bdist.linux-armv7l/wheel/gqlib/alignment
2023-08-24T19:41:27,369   creating build/bdist.linux-armv7l/wheel/gqlib/bin
2023-08-24T19:41:27,370   copying build/lib/gqlib/bin/collate_studies.py -> build/bdist.linux-armv7l/wheel/gqlib/bin
2023-08-24T19:41:27,374   copying build/lib/gqlib/bin/db_collate.py -> build/bdist.linux-armv7l/wheel/gqlib/bin
2023-08-24T19:41:27,378   copying build/lib/gqlib/bin/collate_counts.py -> build/bdist.linux-armv7l/wheel/gqlib/bin
2023-08-24T19:41:27,383   copying build/lib/gqlib/bin/build_domain_database.py -> build/bdist.linux-armv7l/wheel/gqlib/bin
2023-08-24T19:41:27,387   copying build/lib/gqlib/bin/split_table.py -> build/bdist.linux-armv7l/wheel/gqlib/bin
2023-08-24T19:41:27,391   copying build/lib/gqlib/bin/build_custom_database.py -> build/bdist.linux-armv7l/wheel/gqlib/bin
2023-08-24T19:41:27,395   copying build/lib/gqlib/bin/__init__.py -> build/bdist.linux-armv7l/wheel/gqlib/bin
2023-08-24T19:41:27,398   copying build/lib/gqlib/bin/build_gene_database.py -> build/bdist.linux-armv7l/wheel/gqlib/bin
2023-08-24T19:41:27,403   copying build/lib/gqlib/bin/build_bed_database.py -> build/bdist.linux-armv7l/wheel/gqlib/bin
2023-08-24T19:41:27,409   creating build/bdist.linux-armv7l/wheel/gqlib_old
2023-08-24T19:41:27,411   creating build/bdist.linux-armv7l/wheel/gqlib_old/db
2023-08-24T19:41:27,414   creating build/bdist.linux-armv7l/wheel/gqlib_old/db/models
2023-08-24T19:41:27,416   copying build/lib/gqlib_old/db/models/__init__.py -> build/bdist.linux-armv7l/wheel/gqlib_old/db/models
2023-08-24T19:41:27,419   copying build/lib/gqlib_old/db/models/meta.py -> build/bdist.linux-armv7l/wheel/gqlib_old/db/models
2023-08-24T19:41:27,423   copying build/lib/gqlib_old/db/models/db.py -> build/bdist.linux-armv7l/wheel/gqlib_old/db/models
2023-08-24T19:41:27,427   copying build/lib/gqlib_old/db/gff_dbm.py -> build/bdist.linux-armv7l/wheel/gqlib_old/db
2023-08-24T19:41:27,431   copying build/lib/gqlib_old/db/__init__.py -> build/bdist.linux-armv7l/wheel/gqlib_old/db
2023-08-24T19:41:27,434   copying build/lib/gqlib_old/db/database.py -> build/bdist.linux-armv7l/wheel/gqlib_old/db
2023-08-24T19:41:27,438   copying build/lib/gqlib_old/db/db_import.py -> build/bdist.linux-armv7l/wheel/gqlib_old/db
2023-08-24T19:41:27,442   copying build/lib/gqlib_old/db/annotation_db.py -> build/bdist.linux-armv7l/wheel/gqlib_old/db
2023-08-24T19:41:27,448   creating build/bdist.linux-armv7l/wheel/gqlib_old/counters
2023-08-24T19:41:27,449   copying build/lib/gqlib_old/counters/alignment_counter.py -> build/bdist.linux-armv7l/wheel/gqlib_old/counters
2023-08-24T19:41:27,453   copying build/lib/gqlib_old/counters/region_counter.py -> build/bdist.linux-armv7l/wheel/gqlib_old/counters
2023-08-24T19:41:27,457   copying build/lib/gqlib_old/counters/__init__.py -> build/bdist.linux-armv7l/wheel/gqlib_old/counters
2023-08-24T19:41:27,461   copying build/lib/gqlib_old/counters/coverage_counter.py -> build/bdist.linux-armv7l/wheel/gqlib_old/counters
2023-08-24T19:41:27,464   copying build/lib/gqlib_old/counters/count_manager.py -> build/bdist.linux-armv7l/wheel/gqlib_old/counters
2023-08-24T19:41:27,468   copying build/lib/gqlib_old/counters/seq_counter.py -> build/bdist.linux-armv7l/wheel/gqlib_old/counters
2023-08-24T19:41:27,472   copying build/lib/gqlib_old/__init__.py -> build/bdist.linux-armv7l/wheel/gqlib_old
2023-08-24T19:41:27,475   copying build/lib/gqlib_old/__main__.py -> build/bdist.linux-armv7l/wheel/gqlib_old
2023-08-24T19:41:27,479   copying build/lib/gqlib_old/overlap_counter.py -> build/bdist.linux-armv7l/wheel/gqlib_old
2023-08-24T19:41:27,485   creating build/bdist.linux-armv7l/wheel/gqlib_old/profilers
2023-08-24T19:41:27,487   copying build/lib/gqlib_old/profilers/gene_quantifier.py -> build/bdist.linux-armv7l/wheel/gqlib_old/profilers
2023-08-24T19:41:27,491   copying build/lib/gqlib_old/profilers/__init__.py -> build/bdist.linux-armv7l/wheel/gqlib_old/profilers
2023-08-24T19:41:27,495   copying build/lib/gqlib_old/profilers/feature_quantifier.py -> build/bdist.linux-armv7l/wheel/gqlib_old/profilers
2023-08-24T19:41:27,500   copying build/lib/gqlib_old/profilers/region_quantifier.py -> build/bdist.linux-armv7l/wheel/gqlib_old/profilers
2023-08-24T19:41:27,504   creating build/bdist.linux-armv7l/wheel/gqlib_old/annotation
2023-08-24T19:41:27,506   copying build/lib/gqlib_old/annotation/__init__.py -> build/bdist.linux-armv7l/wheel/gqlib_old/annotation
2023-08-24T19:41:27,510   copying build/lib/gqlib_old/annotation/count_writer.py -> build/bdist.linux-armv7l/wheel/gqlib_old/annotation
2023-08-24T19:41:27,514   copying build/lib/gqlib_old/annotation/count_annotator.py -> build/bdist.linux-armv7l/wheel/gqlib_old/annotation
2023-08-24T19:41:27,519   copying build/lib/gqlib_old/handle_args.py -> build/bdist.linux-armv7l/wheel/gqlib_old
2023-08-24T19:41:27,524   creating build/bdist.linux-armv7l/wheel/gqlib_old/alignment
2023-08-24T19:41:27,526   copying build/lib/gqlib_old/alignment/aln_group.py -> build/bdist.linux-armv7l/wheel/gqlib_old/alignment
2023-08-24T19:41:27,529   copying build/lib/gqlib_old/alignment/bamreader.py -> build/bdist.linux-armv7l/wheel/gqlib_old/alignment
2023-08-24T19:41:27,534   copying build/lib/gqlib_old/alignment/pysam_alignment_processor.py -> build/bdist.linux-armv7l/wheel/gqlib_old/alignment
2023-08-24T19:41:27,538   copying build/lib/gqlib_old/alignment/__init__.py -> build/bdist.linux-armv7l/wheel/gqlib_old/alignment
2023-08-24T19:41:27,542   creating build/bdist.linux-armv7l/wheel/gqlib_old/bin
2023-08-24T19:41:27,544   copying build/lib/gqlib_old/bin/collate_studies.py -> build/bdist.linux-armv7l/wheel/gqlib_old/bin
2023-08-24T19:41:27,548   copying build/lib/gqlib_old/bin/collate_counts.py -> build/bdist.linux-armv7l/wheel/gqlib_old/bin
2023-08-24T19:41:27,552   copying build/lib/gqlib_old/bin/build_domain_database.py -> build/bdist.linux-armv7l/wheel/gqlib_old/bin
2023-08-24T19:41:27,557   copying build/lib/gqlib_old/bin/split_table.py -> build/bdist.linux-armv7l/wheel/gqlib_old/bin
2023-08-24T19:41:27,560   copying build/lib/gqlib_old/bin/build_custom_database.py -> build/bdist.linux-armv7l/wheel/gqlib_old/bin
2023-08-24T19:41:27,565   copying build/lib/gqlib_old/bin/__init__.py -> build/bdist.linux-armv7l/wheel/gqlib_old/bin
2023-08-24T19:41:27,568   copying build/lib/gqlib_old/bin/build_gene_database.py -> build/bdist.linux-armv7l/wheel/gqlib_old/bin
2023-08-24T19:41:27,572   copying build/lib/gqlib_old/bin/build_bed_database.py -> build/bdist.linux-armv7l/wheel/gqlib_old/bin
2023-08-24T19:41:27,576   running install_egg_info
2023-08-24T19:41:27,691   Copying gqlib.egg-info to build/bdist.linux-armv7l/wheel/gqlib-2.12.1-py3.7.egg-info
2023-08-24T19:41:27,714   running install_scripts
2023-08-24T19:41:27,746   creating build/bdist.linux-armv7l/wheel/gqlib-2.12.1.dist-info/WHEEL
2023-08-24T19:41:27,750   creating '/tmp/pip-wheel-fpio7mj1/gqlib-2.12.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-08-24T19:41:27,755   adding 'gqlib/__init__.py'
2023-08-24T19:41:27,760   adding 'gqlib/__main__.py'
2023-08-24T19:41:27,764   adding 'gqlib/handle_args.py'
2023-08-24T19:41:27,768   adding 'gqlib/alignment/__init__.py'
2023-08-24T19:41:27,770   adding 'gqlib/alignment/aln_group.py'
2023-08-24T19:41:27,776   adding 'gqlib/alignment/bamreader.py'
2023-08-24T19:41:27,779   adding 'gqlib/alignment/pysam_alignment_processor.py'
2023-08-24T19:41:27,782   adding 'gqlib/annotation/__init__.py'
2023-08-24T19:41:27,787   adding 'gqlib/annotation/count_annotator.py'
2023-08-24T19:41:27,790   adding 'gqlib/annotation/count_writer.py'
2023-08-24T19:41:27,794   adding 'gqlib/bin/__init__.py'
2023-08-24T19:41:27,797   adding 'gqlib/bin/build_bed_database.py'
2023-08-24T19:41:27,801   adding 'gqlib/bin/build_custom_database.py'
2023-08-24T19:41:27,804   adding 'gqlib/bin/build_domain_database.py'
2023-08-24T19:41:27,808   adding 'gqlib/bin/build_gene_database.py'
2023-08-24T19:41:27,812   adding 'gqlib/bin/collate_counts.py'
2023-08-24T19:41:27,815   adding 'gqlib/bin/collate_studies.py'
2023-08-24T19:41:27,818   adding 'gqlib/bin/db_collate.py'
2023-08-24T19:41:27,820   adding 'gqlib/bin/split_table.py'
2023-08-24T19:41:27,824   adding 'gqlib/counters/__init__.py'
2023-08-24T19:41:27,827   adding 'gqlib/counters/alignment_counter.py'
2023-08-24T19:41:27,830   adding 'gqlib/counters/count_manager.py'
2023-08-24T19:41:27,833   adding 'gqlib/counters/region_counter.py'
2023-08-24T19:41:27,835   adding 'gqlib/counters/seq_counter.py'
2023-08-24T19:41:27,839   adding 'gqlib/db/__init__.py'
2023-08-24T19:41:27,842   adding 'gqlib/db/annotation_db.py'
2023-08-24T19:41:27,845   adding 'gqlib/db/database.py'
2023-08-24T19:41:27,848   adding 'gqlib/db/db_import.py'
2023-08-24T19:41:27,852   adding 'gqlib/db/gff_dbm.py'
2023-08-24T19:41:27,855   adding 'gqlib/db/models/__init__.py'
2023-08-24T19:41:27,858   adding 'gqlib/db/models/db.py'
2023-08-24T19:41:27,860   adding 'gqlib/db/models/meta.py'
2023-08-24T19:41:27,863   adding 'gqlib/profilers/__init__.py'
2023-08-24T19:41:27,868   adding 'gqlib/profilers/feature_quantifier.py'
2023-08-24T19:41:27,871   adding 'gqlib/profilers/gene_quantifier.py'
2023-08-24T19:41:27,874   adding 'gqlib/profilers/region_quantifier.py'
2023-08-24T19:41:27,880   adding 'gqlib_old/__init__.py'
2023-08-24T19:41:27,882   adding 'gqlib_old/__main__.py'
2023-08-24T19:41:27,886   adding 'gqlib_old/handle_args.py'
2023-08-24T19:41:27,894   adding 'gqlib_old/overlap_counter.py'
2023-08-24T19:41:27,898   adding 'gqlib_old/alignment/__init__.py'
2023-08-24T19:41:27,900   adding 'gqlib_old/alignment/aln_group.py'
2023-08-24T19:41:27,905   adding 'gqlib_old/alignment/bamreader.py'
2023-08-24T19:41:27,909   adding 'gqlib_old/alignment/pysam_alignment_processor.py'
2023-08-24T19:41:27,912   adding 'gqlib_old/annotation/__init__.py'
2023-08-24T19:41:27,917   adding 'gqlib_old/annotation/count_annotator.py'
2023-08-24T19:41:27,921   adding 'gqlib_old/annotation/count_writer.py'
2023-08-24T19:41:27,925   adding 'gqlib_old/bin/__init__.py'
2023-08-24T19:41:27,928   adding 'gqlib_old/bin/build_bed_database.py'
2023-08-24T19:41:27,932   adding 'gqlib_old/bin/build_custom_database.py'
2023-08-24T19:41:27,935   adding 'gqlib_old/bin/build_domain_database.py'
2023-08-24T19:41:27,938   adding 'gqlib_old/bin/build_gene_database.py'
2023-08-24T19:41:27,941   adding 'gqlib_old/bin/collate_counts.py'
2023-08-24T19:41:27,944   adding 'gqlib_old/bin/collate_studies.py'
2023-08-24T19:41:27,947   adding 'gqlib_old/bin/split_table.py'
2023-08-24T19:41:27,951   adding 'gqlib_old/counters/__init__.py'
2023-08-24T19:41:27,953   adding 'gqlib_old/counters/alignment_counter.py'
2023-08-24T19:41:27,956   adding 'gqlib_old/counters/count_manager.py'
2023-08-24T19:41:27,959   adding 'gqlib_old/counters/coverage_counter.py'
2023-08-24T19:41:27,962   adding 'gqlib_old/counters/region_counter.py'
2023-08-24T19:41:27,964   adding 'gqlib_old/counters/seq_counter.py'
2023-08-24T19:41:27,968   adding 'gqlib_old/db/__init__.py'
2023-08-24T19:41:27,972   adding 'gqlib_old/db/annotation_db.py'
2023-08-24T19:41:27,974   adding 'gqlib_old/db/database.py'
2023-08-24T19:41:27,977   adding 'gqlib_old/db/db_import.py'
2023-08-24T19:41:27,981   adding 'gqlib_old/db/gff_dbm.py'
2023-08-24T19:41:27,984   adding 'gqlib_old/db/models/__init__.py'
2023-08-24T19:41:27,987   adding 'gqlib_old/db/models/db.py'
2023-08-24T19:41:27,989   adding 'gqlib_old/db/models/meta.py'
2023-08-24T19:41:27,993   adding 'gqlib_old/profilers/__init__.py'
2023-08-24T19:41:27,997   adding 'gqlib_old/profilers/feature_quantifier.py'
2023-08-24T19:41:28,000   adding 'gqlib_old/profilers/gene_quantifier.py'
2023-08-24T19:41:28,003   adding 'gqlib_old/profilers/region_quantifier.py'
2023-08-24T19:41:28,006   adding 'gqlib-2.12.1.dist-info/LICENSE'
2023-08-24T19:41:28,008   adding 'gqlib-2.12.1.dist-info/METADATA'
2023-08-24T19:41:28,010   adding 'gqlib-2.12.1.dist-info/WHEEL'
2023-08-24T19:41:28,011   adding 'gqlib-2.12.1.dist-info/top_level.txt'
2023-08-24T19:41:28,015   adding 'gqlib-2.12.1.dist-info/RECORD'
2023-08-24T19:41:28,023   removing build/bdist.linux-armv7l/wheel
2023-08-24T19:41:28,227   Building wheel for gqlib (setup.py): finished with status 'done'
2023-08-24T19:41:28,237   Created wheel for gqlib: filename=gqlib-2.12.1-py3-none-any.whl size=104640 sha256=f1fb244343d7ea0235837d6a1bd7c60c95f6755b1a2b831691e04f851b4e551b
2023-08-24T19:41:28,239   Stored in directory: /tmp/pip-ephem-wheel-cache-tqh827z8/wheels/69/13/60/af622927a7a381a923ed199a7f798d26544e78075d939d00e3
2023-08-24T19:41:28,271 Successfully built gqlib
2023-08-24T19:41:28,287 Removed build tracker: '/tmp/pip-build-tracker-p__gn6q9'