2023-08-29T08:28:43,196 Created temporary directory: /tmp/pip-build-tracker-m6w4cl66 2023-08-29T08:28:43,199 Initialized build tracking at /tmp/pip-build-tracker-m6w4cl66 2023-08-29T08:28:43,200 Created build tracker: /tmp/pip-build-tracker-m6w4cl66 2023-08-29T08:28:43,200 Entered build tracker: /tmp/pip-build-tracker-m6w4cl66 2023-08-29T08:28:43,201 Created temporary directory: /tmp/pip-wheel-3xnbu2ik 2023-08-29T08:28:43,210 Created temporary directory: /tmp/pip-ephem-wheel-cache-rorjkxqi 2023-08-29T08:28:43,265 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-08-29T08:28:43,273 2 location(s) to search for versions of papyrus-scripts: 2023-08-29T08:28:43,273 * https://pypi.org/simple/papyrus-scripts/ 2023-08-29T08:28:43,273 * https://www.piwheels.org/simple/papyrus-scripts/ 2023-08-29T08:28:43,275 Fetching project page and analyzing links: https://pypi.org/simple/papyrus-scripts/ 2023-08-29T08:28:43,276 Getting page https://pypi.org/simple/papyrus-scripts/ 2023-08-29T08:28:43,280 Found index url https://pypi.org/simple/ 2023-08-29T08:28:43,470 Fetched page https://pypi.org/simple/papyrus-scripts/ as application/vnd.pypi.simple.v1+json 2023-08-29T08:28:43,475 Skipping link: No binaries permitted for papyrus-scripts: https://files.pythonhosted.org/packages/b5/19/95564c6182f53424b98a9b226fad2732a775e1b03240f98026d1f4a31c09/papyrus_scripts-1.0.0-py3-none-any.whl (from https://pypi.org/simple/papyrus-scripts/) 2023-08-29T08:28:43,476 Found link https://files.pythonhosted.org/packages/a8/fa/c9965193e37d2e8d7d546604d0995edc8d5117401823c1db7f86b4039889/papyrus_scripts-1.0.0.tar.gz (from https://pypi.org/simple/papyrus-scripts/), version: 1.0.0 2023-08-29T08:28:43,477 Skipping link: No binaries permitted for papyrus-scripts: https://files.pythonhosted.org/packages/40/cb/13f41607756a77e4cd805fa9b08a8bc3ee15e5db1a8c072793d70b9af909/papyrus_scripts-1.0.1-py3-none-any.whl (from https://pypi.org/simple/papyrus-scripts/) 2023-08-29T08:28:43,477 Found link https://files.pythonhosted.org/packages/9e/74/fbeebe2236ef7fac6e618ef9340b1d0bd356968d8035d4e4c8d3518b2aef/papyrus_scripts-1.0.1.tar.gz (from https://pypi.org/simple/papyrus-scripts/), version: 1.0.1 2023-08-29T08:28:43,478 Skipping link: No binaries permitted for papyrus-scripts: https://files.pythonhosted.org/packages/37/e6/ce2206c4a5147ad1ce46002653ebea21ec6a11d1e14c8efb8ab1ce937503/papyrus_scripts-1.0.2-py3-none-any.whl (from https://pypi.org/simple/papyrus-scripts/) 2023-08-29T08:28:43,478 Found link https://files.pythonhosted.org/packages/6b/54/6ae4f489632303221c4e7e55bf7277cd1c8bbc6061531e898dcee8383ada/papyrus_scripts-1.0.2.tar.gz (from https://pypi.org/simple/papyrus-scripts/), version: 1.0.2 2023-08-29T08:28:43,479 Skipping link: No binaries permitted for papyrus-scripts: https://files.pythonhosted.org/packages/8f/3b/fefbe990c401b882b359c3827b6b8df211ee4722139c16133308b00515e4/papyrus_scripts-1.0.3-py3-none-any.whl (from https://pypi.org/simple/papyrus-scripts/) 2023-08-29T08:28:43,480 Found link https://files.pythonhosted.org/packages/c0/be/ef1fc8c69ba39ecf9d4a6d42ffcf25f07a7f8912fe1c15f1e77b40be8f90/papyrus_scripts-1.0.3.tar.gz (from https://pypi.org/simple/papyrus-scripts/), version: 1.0.3 2023-08-29T08:28:43,480 Fetching project page and analyzing links: https://www.piwheels.org/simple/papyrus-scripts/ 2023-08-29T08:28:43,481 Getting page https://www.piwheels.org/simple/papyrus-scripts/ 2023-08-29T08:28:43,483 Found index url https://www.piwheels.org/simple/ 2023-08-29T08:28:43,707 Fetched page https://www.piwheels.org/simple/papyrus-scripts/ as text/html 2023-08-29T08:28:43,711 Skipping link: No binaries permitted for papyrus-scripts: https://www.piwheels.org/simple/papyrus-scripts/papyrus_scripts-1.0.2-py3-none-any.whl#sha256=0c5c255057debeeb39bc7754d5580f5017739a5511dfc5c8a0a4cea4381a216b (from https://www.piwheels.org/simple/papyrus-scripts/) 2023-08-29T08:28:43,712 Skipping link: No binaries permitted for papyrus-scripts: https://www.piwheels.org/simple/papyrus-scripts/papyrus_scripts-1.0.1-py3-none-any.whl#sha256=a9a05d11a4dab2af708d68a7d80f14bde89175c2655db1d624fecddf5e188e07 (from https://www.piwheels.org/simple/papyrus-scripts/) 2023-08-29T08:28:43,712 Skipping link: No binaries permitted for papyrus-scripts: https://www.piwheels.org/simple/papyrus-scripts/papyrus_scripts-1.0.0-py3-none-any.whl#sha256=0547595805abc574ec34f214d521dcf762c43e1c7da898f1bb95a2c6eda24460 (from https://www.piwheels.org/simple/papyrus-scripts/) 2023-08-29T08:28:43,713 Skipping link: not a file: https://www.piwheels.org/simple/papyrus-scripts/ 2023-08-29T08:28:43,713 Skipping link: not a file: https://pypi.org/simple/papyrus-scripts/ 2023-08-29T08:28:43,746 Given no hashes to check 1 links for project 'papyrus-scripts': discarding no candidates 2023-08-29T08:28:43,777 Collecting papyrus-scripts==1.0.3 2023-08-29T08:28:43,782 Created temporary directory: /tmp/pip-unpack-k05gi0i9 2023-08-29T08:28:43,982 Downloading papyrus_scripts-1.0.3.tar.gz (69 kB) 2023-08-29T08:28:44,195 Added papyrus-scripts==1.0.3 from https://files.pythonhosted.org/packages/c0/be/ef1fc8c69ba39ecf9d4a6d42ffcf25f07a7f8912fe1c15f1e77b40be8f90/papyrus_scripts-1.0.3.tar.gz to build tracker '/tmp/pip-build-tracker-m6w4cl66' 2023-08-29T08:28:44,199 Running setup.py (path:/tmp/pip-wheel-3xnbu2ik/papyrus-scripts_c97de5dd55ff43b1ac6c7ce49320ed31/setup.py) egg_info for package papyrus-scripts 2023-08-29T08:28:44,200 Created temporary directory: /tmp/pip-pip-egg-info-34u3txyg 2023-08-29T08:28:44,201 Preparing metadata (setup.py): started 2023-08-29T08:28:44,203 Running command python setup.py egg_info 2023-08-29T08:28:46,191 running egg_info 2023-08-29T08:28:46,195 creating /tmp/pip-pip-egg-info-34u3txyg/papyrus_scripts.egg-info 2023-08-29T08:28:46,306 writing /tmp/pip-pip-egg-info-34u3txyg/papyrus_scripts.egg-info/PKG-INFO 2023-08-29T08:28:46,311 writing dependency_links to /tmp/pip-pip-egg-info-34u3txyg/papyrus_scripts.egg-info/dependency_links.txt 2023-08-29T08:28:46,315 writing entry points to /tmp/pip-pip-egg-info-34u3txyg/papyrus_scripts.egg-info/entry_points.txt 2023-08-29T08:28:46,319 writing requirements to /tmp/pip-pip-egg-info-34u3txyg/papyrus_scripts.egg-info/requires.txt 2023-08-29T08:28:46,321 writing top-level names to /tmp/pip-pip-egg-info-34u3txyg/papyrus_scripts.egg-info/top_level.txt 2023-08-29T08:28:46,324 writing manifest file '/tmp/pip-pip-egg-info-34u3txyg/papyrus_scripts.egg-info/SOURCES.txt' 2023-08-29T08:28:46,668 reading manifest file '/tmp/pip-pip-egg-info-34u3txyg/papyrus_scripts.egg-info/SOURCES.txt' 2023-08-29T08:28:46,671 adding license file 'LICENSE' 2023-08-29T08:28:46,677 writing manifest file '/tmp/pip-pip-egg-info-34u3txyg/papyrus_scripts.egg-info/SOURCES.txt' 2023-08-29T08:28:46,679 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/config/setupcfg.py:293: _DeprecatedConfig: Deprecated config in `setup.cfg` 2023-08-29T08:28:46,680 !! 2023-08-29T08:28:46,681 ******************************************************************************** 2023-08-29T08:28:46,681 The license_file parameter is deprecated, use license_files instead. 2023-08-29T08:28:46,682 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-08-29T08:28:46,682 or your builds will no longer be supported. 2023-08-29T08:28:46,683 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-08-29T08:28:46,684 ******************************************************************************** 2023-08-29T08:28:46,684 !! 2023-08-29T08:28:46,685 parsed = self.parsers.get(option_name, lambda x: x)(value) 2023-08-29T08:28:46,799 Preparing metadata (setup.py): finished with status 'done' 2023-08-29T08:28:46,814 Source in /tmp/pip-wheel-3xnbu2ik/papyrus-scripts_c97de5dd55ff43b1ac6c7ce49320ed31 has version 1.0.3, which satisfies requirement papyrus-scripts==1.0.3 from https://files.pythonhosted.org/packages/c0/be/ef1fc8c69ba39ecf9d4a6d42ffcf25f07a7f8912fe1c15f1e77b40be8f90/papyrus_scripts-1.0.3.tar.gz 2023-08-29T08:28:46,816 Removed papyrus-scripts==1.0.3 from https://files.pythonhosted.org/packages/c0/be/ef1fc8c69ba39ecf9d4a6d42ffcf25f07a7f8912fe1c15f1e77b40be8f90/papyrus_scripts-1.0.3.tar.gz from build tracker '/tmp/pip-build-tracker-m6w4cl66' 2023-08-29T08:28:46,828 Created temporary directory: /tmp/pip-unpack-42ylkl7t 2023-08-29T08:28:46,829 Building wheels for collected packages: papyrus-scripts 2023-08-29T08:28:46,839 Created temporary directory: /tmp/pip-wheel-zdufbhbh 2023-08-29T08:28:46,839 Building wheel for papyrus-scripts (setup.py): started 2023-08-29T08:28:46,841 Destination directory: /tmp/pip-wheel-zdufbhbh 2023-08-29T08:28:46,842 Running command python setup.py bdist_wheel 2023-08-29T08:28:48,185 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/config/setupcfg.py:293: _DeprecatedConfig: Deprecated config in `setup.cfg` 2023-08-29T08:28:48,186 !! 2023-08-29T08:28:48,187 ******************************************************************************** 2023-08-29T08:28:48,187 The license_file parameter is deprecated, use license_files instead. 2023-08-29T08:28:48,188 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-08-29T08:28:48,188 or your builds will no longer be supported. 2023-08-29T08:28:48,189 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-08-29T08:28:48,189 ******************************************************************************** 2023-08-29T08:28:48,190 !! 2023-08-29T08:28:48,190 parsed = self.parsers.get(option_name, lambda x: x)(value) 2023-08-29T08:28:48,888 running bdist_wheel 2023-08-29T08:28:49,783 running build 2023-08-29T08:28:49,783 running build_py 2023-08-29T08:28:49,905 creating build 2023-08-29T08:28:49,905 creating build/lib 2023-08-29T08:28:49,907 creating build/lib/papyrus_scripts 2023-08-29T08:28:49,909 copying src/papyrus_scripts/reader.py -> build/lib/papyrus_scripts 2023-08-29T08:28:49,915 copying src/papyrus_scripts/subsim_search.py -> build/lib/papyrus_scripts 2023-08-29T08:28:49,922 copying src/papyrus_scripts/neuralnet.py -> build/lib/papyrus_scripts 2023-08-29T08:28:49,926 copying src/papyrus_scripts/__init__.py -> build/lib/papyrus_scripts 2023-08-29T08:28:49,930 copying src/papyrus_scripts/fingerprint.py -> build/lib/papyrus_scripts 2023-08-29T08:28:49,934 copying src/papyrus_scripts/cli.py -> build/lib/papyrus_scripts 2023-08-29T08:28:49,940 copying src/papyrus_scripts/modelling.py -> build/lib/papyrus_scripts 2023-08-29T08:28:49,947 copying src/papyrus_scripts/matchRCSB.py -> build/lib/papyrus_scripts 2023-08-29T08:28:49,951 copying src/papyrus_scripts/download.py -> build/lib/papyrus_scripts 2023-08-29T08:28:49,956 copying src/papyrus_scripts/__main__.py -> build/lib/papyrus_scripts 2023-08-29T08:28:49,960 copying src/papyrus_scripts/preprocess.py -> build/lib/papyrus_scripts 2023-08-29T08:28:49,967 creating build/lib/papyrus_scripts/utils 2023-08-29T08:28:49,969 copying src/papyrus_scripts/utils/UniprotMatch.py -> build/lib/papyrus_scripts/utils 2023-08-29T08:28:49,974 copying src/papyrus_scripts/utils/__init__.py -> build/lib/papyrus_scripts/utils 2023-08-29T08:28:49,977 copying src/papyrus_scripts/utils/mol_reader.py -> build/lib/papyrus_scripts/utils 2023-08-29T08:28:49,982 copying src/papyrus_scripts/utils/IO.py -> build/lib/papyrus_scripts/utils 2023-08-29T08:28:49,987 running egg_info 2023-08-29T08:28:50,228 writing src/papyrus_scripts.egg-info/PKG-INFO 2023-08-29T08:28:50,233 writing dependency_links to src/papyrus_scripts.egg-info/dependency_links.txt 2023-08-29T08:28:50,238 writing entry points to src/papyrus_scripts.egg-info/entry_points.txt 2023-08-29T08:28:50,242 writing requirements to src/papyrus_scripts.egg-info/requires.txt 2023-08-29T08:28:50,244 writing top-level names to src/papyrus_scripts.egg-info/top_level.txt 2023-08-29T08:28:50,365 reading manifest file 'src/papyrus_scripts.egg-info/SOURCES.txt' 2023-08-29T08:28:50,370 adding license file 'LICENSE' 2023-08-29T08:28:50,377 writing manifest file 'src/papyrus_scripts.egg-info/SOURCES.txt' 2023-08-29T08:28:50,384 copying src/papyrus_scripts/utils/links.json -> build/lib/papyrus_scripts/utils 2023-08-29T08:28:50,510 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-08-29T08:28:50,511 !! 2023-08-29T08:28:50,511 ******************************************************************************** 2023-08-29T08:28:50,512 Please avoid running ``setup.py`` directly. 2023-08-29T08:28:50,512 Instead, use pypa/build, pypa/installer, pypa/build or 2023-08-29T08:28:50,512 other standards-based tools. 2023-08-29T08:28:50,513 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-08-29T08:28:50,513 ******************************************************************************** 2023-08-29T08:28:50,514 !! 2023-08-29T08:28:50,514 self.initialize_options() 2023-08-29T08:28:50,624 installing to build/bdist.linux-armv7l/wheel 2023-08-29T08:28:50,624 running install 2023-08-29T08:28:50,684 running install_lib 2023-08-29T08:28:50,799 creating build/bdist.linux-armv7l 2023-08-29T08:28:50,800 creating build/bdist.linux-armv7l/wheel 2023-08-29T08:28:50,804 creating build/bdist.linux-armv7l/wheel/papyrus_scripts 2023-08-29T08:28:50,806 copying build/lib/papyrus_scripts/reader.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts 2023-08-29T08:28:50,811 copying build/lib/papyrus_scripts/subsim_search.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts 2023-08-29T08:28:50,819 copying build/lib/papyrus_scripts/neuralnet.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts 2023-08-29T08:28:50,824 copying build/lib/papyrus_scripts/__init__.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts 2023-08-29T08:28:50,828 creating build/bdist.linux-armv7l/wheel/papyrus_scripts/utils 2023-08-29T08:28:50,830 copying build/lib/papyrus_scripts/utils/UniprotMatch.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts/utils 2023-08-29T08:28:50,835 copying build/lib/papyrus_scripts/utils/__init__.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts/utils 2023-08-29T08:28:50,839 copying build/lib/papyrus_scripts/utils/mol_reader.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts/utils 2023-08-29T08:28:50,843 copying build/lib/papyrus_scripts/utils/links.json -> build/bdist.linux-armv7l/wheel/papyrus_scripts/utils 2023-08-29T08:28:50,848 copying build/lib/papyrus_scripts/utils/IO.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts/utils 2023-08-29T08:28:50,852 copying build/lib/papyrus_scripts/fingerprint.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts 2023-08-29T08:28:50,857 copying build/lib/papyrus_scripts/cli.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts 2023-08-29T08:28:50,862 copying build/lib/papyrus_scripts/modelling.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts 2023-08-29T08:28:50,869 copying build/lib/papyrus_scripts/matchRCSB.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts 2023-08-29T08:28:50,874 copying build/lib/papyrus_scripts/download.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts 2023-08-29T08:28:50,879 copying build/lib/papyrus_scripts/__main__.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts 2023-08-29T08:28:50,883 copying build/lib/papyrus_scripts/preprocess.py -> build/bdist.linux-armv7l/wheel/papyrus_scripts 2023-08-29T08:28:50,889 running install_egg_info 2023-08-29T08:28:51,015 Copying src/papyrus_scripts.egg-info to build/bdist.linux-armv7l/wheel/papyrus_scripts-1.0.3-py3.7.egg-info 2023-08-29T08:28:51,040 running install_scripts 2023-08-29T08:28:51,092 creating build/bdist.linux-armv7l/wheel/papyrus_scripts-1.0.3.dist-info/WHEEL 2023-08-29T08:28:51,097 creating '/tmp/pip-wheel-zdufbhbh/papyrus_scripts-1.0.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-08-29T08:28:51,103 adding 'papyrus_scripts/__init__.py' 2023-08-29T08:28:51,107 adding 'papyrus_scripts/__main__.py' 2023-08-29T08:28:51,114 adding 'papyrus_scripts/cli.py' 2023-08-29T08:28:51,120 adding 'papyrus_scripts/download.py' 2023-08-29T08:28:51,125 adding 'papyrus_scripts/fingerprint.py' 2023-08-29T08:28:51,129 adding 'papyrus_scripts/matchRCSB.py' 2023-08-29T08:28:51,142 adding 'papyrus_scripts/modelling.py' 2023-08-29T08:28:51,149 adding 'papyrus_scripts/neuralnet.py' 2023-08-29T08:28:51,158 adding 'papyrus_scripts/preprocess.py' 2023-08-29T08:28:51,165 adding 'papyrus_scripts/reader.py' 2023-08-29T08:28:51,177 adding 'papyrus_scripts/subsim_search.py' 2023-08-29T08:28:51,184 adding 'papyrus_scripts/utils/IO.py' 2023-08-29T08:28:51,189 adding 'papyrus_scripts/utils/UniprotMatch.py' 2023-08-29T08:28:51,192 adding 'papyrus_scripts/utils/__init__.py' 2023-08-29T08:28:51,196 adding 'papyrus_scripts/utils/links.json' 2023-08-29T08:28:51,200 adding 'papyrus_scripts/utils/mol_reader.py' 2023-08-29T08:28:51,205 adding 'papyrus_scripts-1.0.3.dist-info/LICENSE' 2023-08-29T08:28:51,209 adding 'papyrus_scripts-1.0.3.dist-info/METADATA' 2023-08-29T08:28:51,211 adding 'papyrus_scripts-1.0.3.dist-info/WHEEL' 2023-08-29T08:28:51,213 adding 'papyrus_scripts-1.0.3.dist-info/entry_points.txt' 2023-08-29T08:28:51,215 adding 'papyrus_scripts-1.0.3.dist-info/top_level.txt' 2023-08-29T08:28:51,217 adding 'papyrus_scripts-1.0.3.dist-info/RECORD' 2023-08-29T08:28:51,223 removing build/bdist.linux-armv7l/wheel 2023-08-29T08:28:51,392 Building wheel for papyrus-scripts (setup.py): finished with status 'done' 2023-08-29T08:28:51,401 Created wheel for papyrus-scripts: filename=papyrus_scripts-1.0.3-py3-none-any.whl size=72455 sha256=d8726fad87c54033c1ccfb24793cfe931514385e31f985decbd4db0359161f21 2023-08-29T08:28:51,403 Stored in directory: /tmp/pip-ephem-wheel-cache-rorjkxqi/wheels/0e/df/af/8e5b6709f46c3abccaf1ee2564501e63ade4f7df38b56854f4 2023-08-29T08:28:51,434 Successfully built papyrus-scripts 2023-08-29T08:28:51,447 Removed build tracker: '/tmp/pip-build-tracker-m6w4cl66'