2023-08-31T09:58:22,450 Created temporary directory: /tmp/pip-build-tracker-1yq1rc76
2023-08-31T09:58:22,451 Initialized build tracking at /tmp/pip-build-tracker-1yq1rc76
2023-08-31T09:58:22,451 Created build tracker: /tmp/pip-build-tracker-1yq1rc76
2023-08-31T09:58:22,452 Entered build tracker: /tmp/pip-build-tracker-1yq1rc76
2023-08-31T09:58:22,452 Created temporary directory: /tmp/pip-wheel-ybwy4bli
2023-08-31T09:58:22,455 Created temporary directory: /tmp/pip-ephem-wheel-cache-7uxkgosx
2023-08-31T09:58:22,478 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-08-31T09:58:22,481 2 location(s) to search for versions of pdbeccdutils:
2023-08-31T09:58:22,481 * https://pypi.org/simple/pdbeccdutils/
2023-08-31T09:58:22,481 * https://www.piwheels.org/simple/pdbeccdutils/
2023-08-31T09:58:22,482 Fetching project page and analyzing links: https://pypi.org/simple/pdbeccdutils/
2023-08-31T09:58:22,482 Getting page https://pypi.org/simple/pdbeccdutils/
2023-08-31T09:58:22,484 Found index url https://pypi.org/simple/
2023-08-31T09:58:22,536 Fetched page https://pypi.org/simple/pdbeccdutils/ as application/vnd.pypi.simple.v1+json
2023-08-31T09:58:22,540   Skipping link: No binaries permitted for pdbeccdutils: https://files.pythonhosted.org/packages/a6/6b/1b0cbfa7ebeac876b55eb4a141bcacd9b831221ff0fccd8d10882071f444/pdbeccdutils-0.5.5-py3-none-any.whl (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.6)
2023-08-31T09:58:22,541   Skipping link: No binaries permitted for pdbeccdutils: https://files.pythonhosted.org/packages/04/62/f38851eebf9825f8452f976361057f14d5e61b3facdcd94b85c37b279c31/pdbeccdutils-0.5.6-py3-none-any.whl (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.6)
2023-08-31T09:58:22,541   Skipping link: No binaries permitted for pdbeccdutils: https://files.pythonhosted.org/packages/1b/74/321adb72be60f4f3ee1b9c1d8d3bf795b392d009871546fb12cba3a26eab/pdbeccdutils-0.5.7-py3-none-any.whl (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.6)
2023-08-31T09:58:22,541   Skipping link: No binaries permitted for pdbeccdutils: https://files.pythonhosted.org/packages/be/b7/61cec4f8e7b1d3571e33c74e8fa496796f46a6c050156f89793a14967164/pdbeccdutils-0.5.8-py3-none-any.whl (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.6)
2023-08-31T09:58:22,541   Skipping link: No binaries permitted for pdbeccdutils: https://files.pythonhosted.org/packages/50/dd/a74e7dfbd69b37aab02e80fe138bfe5dec69f01d87fe97686d25f9b2e32f/pdbeccdutils-0.5.9-py3-none-any.whl (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.6)
2023-08-31T09:58:22,542   Found link https://files.pythonhosted.org/packages/9b/f3/1cb8eecc84e504d7a6c1353f9309fe7acbe7b04166d4f2736a4466eec4f9/pdbeccdutils-0.5.9.macosx-10.9-x86_64.tar.gz (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.6), version: 0.5.9.macosx-10.9-x86_64
2023-08-31T09:58:22,542   Skipping link: No binaries permitted for pdbeccdutils: https://files.pythonhosted.org/packages/b9/61/fa3c814f95f62ce4e16481addc99e130b1caf40bd284694e08991f3cbfb8/pdbeccdutils-0.5.10-py3-none-any.whl (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.6)
2023-08-31T09:58:22,543   Found link https://files.pythonhosted.org/packages/53/43/fefcd9bee928240865de7c999dc1774fb466a36d4e9f913549914e4bb52d/pdbeccdutils-0.5.10.tar.gz (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.6), version: 0.5.10
2023-08-31T09:58:22,543   Skipping link: No binaries permitted for pdbeccdutils: https://files.pythonhosted.org/packages/de/ff/db86fe950961d94a287b249c3835fdfac171b62d83d65360e77d5a3ed78a/pdbeccdutils-0.6-py3-none-any.whl (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.6)
2023-08-31T09:58:22,544   Found link https://files.pythonhosted.org/packages/1d/a2/3d33a24da0d50795b893737072b4eec136d8722d311151ca771279e9d8d6/pdbeccdutils-0.6.tar.gz (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.6), version: 0.6
2023-08-31T09:58:22,544   Skipping link: No binaries permitted for pdbeccdutils: https://files.pythonhosted.org/packages/f5/02/750e8d07244bc5f6714cfb1b460cb4302b2d969188685cd67c63243c25cb/pdbeccdutils-0.7.0-py3-none-any.whl (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.6)
2023-08-31T09:58:22,545   Found link https://files.pythonhosted.org/packages/8e/77/12136a229df427cd00454d329b3cd2c5d04433304758e8d9754bca455c17/pdbeccdutils-0.7.0.tar.gz (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.6), version: 0.7.0
2023-08-31T09:58:22,545   Skipping link: No binaries permitted for pdbeccdutils: https://files.pythonhosted.org/packages/bb/cf/5deb57b364e520d095943bc3c4408367e651b77f64ba176f2070ab8877dd/pdbeccdutils-0.7.1-py3-none-any.whl (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.6)
2023-08-31T09:58:22,545   Found link https://files.pythonhosted.org/packages/83/63/ea04fd8f2260be1b15df89b1d409e4363c24727f89027993fe3563dc351c/pdbeccdutils-0.7.1.tar.gz (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.6), version: 0.7.1
2023-08-31T09:58:22,546   Skipping link: No binaries permitted for pdbeccdutils: https://files.pythonhosted.org/packages/4b/59/7111f32ddbd9145b4107db3f8bb2bbef822e79e026f8287e8f49fd622b24/pdbeccdutils-0.7.2-py3-none-any.whl (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.6)
2023-08-31T09:58:22,546   Found link https://files.pythonhosted.org/packages/8a/5a/14c349acf5400490f6c222647f7461188e4cc809150a86c4c7d8064442b2/pdbeccdutils-0.7.2.tar.gz (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.6), version: 0.7.2
2023-08-31T09:58:22,546   Skipping link: No binaries permitted for pdbeccdutils: https://files.pythonhosted.org/packages/2f/db/29fb2127bfea91853fe6d80c6fea2f3b800f5a7485770ecb335cc9d2d666/pdbeccdutils-0.8.0-py3-none-any.whl (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.9)
2023-08-31T09:58:22,547   Found link https://files.pythonhosted.org/packages/3a/0b/3c2f715c07c12c7de1779485ee379b905932527681f298c3c9d9dacd4109/pdbeccdutils-0.8.0.tar.gz (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.9), version: 0.8.0
2023-08-31T09:58:22,547   Skipping link: No binaries permitted for pdbeccdutils: https://files.pythonhosted.org/packages/4b/49/1a8b4dc6d16e26c89ea1c25a4a33db1b948dbc4f1a3dcbbdec6b4d283e5f/pdbeccdutils-0.8.1-py3-none-any.whl (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.9)
2023-08-31T09:58:22,548   Found link https://files.pythonhosted.org/packages/22/19/9066e642f24f6ea00e1ee877e087dc137b377fedb254742b1ad856688547/pdbeccdutils-0.8.1.tar.gz (from https://pypi.org/simple/pdbeccdutils/) (requires-python:>=3.9), version: 0.8.1
2023-08-31T09:58:22,548 Fetching project page and analyzing links: https://www.piwheels.org/simple/pdbeccdutils/
2023-08-31T09:58:22,548 Getting page https://www.piwheels.org/simple/pdbeccdutils/
2023-08-31T09:58:22,550 Found index url https://www.piwheels.org/simple/
2023-08-31T09:58:22,707 Fetched page https://www.piwheels.org/simple/pdbeccdutils/ as text/html
2023-08-31T09:58:22,710   Skipping link: No binaries permitted for pdbeccdutils: https://www.piwheels.org/simple/pdbeccdutils/pdbeccdutils-0.8.0-py3-none-any.whl#sha256=95f99f9be1265fad438476b06578874da5cf2b6e8ce552ae08e63d7dd826448d (from https://www.piwheels.org/simple/pdbeccdutils/) (requires-python:>=3.9)
2023-08-31T09:58:22,710   Skipping link: No binaries permitted for pdbeccdutils: https://www.piwheels.org/simple/pdbeccdutils/pdbeccdutils-0.7.2-py3-none-any.whl#sha256=cee73f6d5d7691504b43e067e47e40e2e9f65c2877f7d5cb1ebee83072563892 (from https://www.piwheels.org/simple/pdbeccdutils/) (requires-python:>=3.6)
2023-08-31T09:58:22,710   Skipping link: No binaries permitted for pdbeccdutils: https://www.piwheels.org/simple/pdbeccdutils/pdbeccdutils-0.7.1-py3-none-any.whl#sha256=229e2d18aefd68bb687af6a1a1f24c7c235880bca55bfc6e94acd3623ff60bf9 (from https://www.piwheels.org/simple/pdbeccdutils/) (requires-python:>=3.6)
2023-08-31T09:58:22,711   Skipping link: No binaries permitted for pdbeccdutils: https://www.piwheels.org/simple/pdbeccdutils/pdbeccdutils-0.7.0-py3-none-any.whl#sha256=23019671e99e1eff739f76e1c461c42851855d415e3cf8e72c511cf08aac0b91 (from https://www.piwheels.org/simple/pdbeccdutils/) (requires-python:>=3.6)
2023-08-31T09:58:22,711   Skipping link: No binaries permitted for pdbeccdutils: https://www.piwheels.org/simple/pdbeccdutils/pdbeccdutils-0.6-py3-none-any.whl#sha256=9794eaa2ae664987b4c775e3a10992bcf07f170e2b9281d01414e77a90fc4dc8 (from https://www.piwheels.org/simple/pdbeccdutils/) (requires-python:>=3.6)
2023-08-31T09:58:22,711   Skipping link: No binaries permitted for pdbeccdutils: https://www.piwheels.org/simple/pdbeccdutils/pdbeccdutils-0.5.10-py3-none-any.whl#sha256=6167688099c1971017ef069b3522ab646207bf1ae4f1f69ead9825db98c0b5d2 (from https://www.piwheels.org/simple/pdbeccdutils/) (requires-python:>=3.6)
2023-08-31T09:58:22,711   Skipping link: No binaries permitted for pdbeccdutils: https://www.piwheels.org/simple/pdbeccdutils/pdbeccdutils-0.5.9-py3-none-any.whl#sha256=4371f5464ab054be5c99fdf769d2cfe4de21da32930f157566a553f1020ac74a (from https://www.piwheels.org/simple/pdbeccdutils/) (requires-python:>=3.6)
2023-08-31T09:58:22,711 Skipping link: not a file: https://www.piwheels.org/simple/pdbeccdutils/
2023-08-31T09:58:22,712 Skipping link: not a file: https://pypi.org/simple/pdbeccdutils/
2023-08-31T09:58:22,730 Given no hashes to check 1 links for project 'pdbeccdutils': discarding no candidates
2023-08-31T09:58:22,747 Collecting pdbeccdutils==0.8.1
2023-08-31T09:58:22,749   Created temporary directory: /tmp/pip-unpack-emkmj17f
2023-08-31T09:58:22,957   Downloading pdbeccdutils-0.8.1.tar.gz (120 kB)
2023-08-31T09:58:23,152   Added pdbeccdutils==0.8.1 from https://files.pythonhosted.org/packages/22/19/9066e642f24f6ea00e1ee877e087dc137b377fedb254742b1ad856688547/pdbeccdutils-0.8.1.tar.gz to build tracker '/tmp/pip-build-tracker-1yq1rc76'
2023-08-31T09:58:23,154   Running setup.py (path:/tmp/pip-wheel-ybwy4bli/pdbeccdutils_d91f4a3b6b3946098a12e00390ad7447/setup.py) egg_info for package pdbeccdutils
2023-08-31T09:58:23,154   Created temporary directory: /tmp/pip-pip-egg-info-wsdro66z
2023-08-31T09:58:23,155   Preparing metadata (setup.py): started
2023-08-31T09:58:23,156   Running command python setup.py egg_info
2023-08-31T09:58:23,821   running egg_info
2023-08-31T09:58:23,822   creating /tmp/pip-pip-egg-info-wsdro66z/pdbeccdutils.egg-info
2023-08-31T09:58:23,850   writing /tmp/pip-pip-egg-info-wsdro66z/pdbeccdutils.egg-info/PKG-INFO
2023-08-31T09:58:23,853   writing dependency_links to /tmp/pip-pip-egg-info-wsdro66z/pdbeccdutils.egg-info/dependency_links.txt
2023-08-31T09:58:23,855   writing entry points to /tmp/pip-pip-egg-info-wsdro66z/pdbeccdutils.egg-info/entry_points.txt
2023-08-31T09:58:23,857   writing requirements to /tmp/pip-pip-egg-info-wsdro66z/pdbeccdutils.egg-info/requires.txt
2023-08-31T09:58:23,858   writing top-level names to /tmp/pip-pip-egg-info-wsdro66z/pdbeccdutils.egg-info/top_level.txt
2023-08-31T09:58:23,859   writing manifest file '/tmp/pip-pip-egg-info-wsdro66z/pdbeccdutils.egg-info/SOURCES.txt'
2023-08-31T09:58:23,951   reading manifest file '/tmp/pip-pip-egg-info-wsdro66z/pdbeccdutils.egg-info/SOURCES.txt'
2023-08-31T09:58:23,953   reading manifest template 'MANIFEST.in'
2023-08-31T09:58:23,955   adding license file 'LICENSE'
2023-08-31T09:58:23,959   writing manifest file '/tmp/pip-pip-egg-info-wsdro66z/pdbeccdutils.egg-info/SOURCES.txt'
2023-08-31T09:58:24,020   Preparing metadata (setup.py): finished with status 'done'
2023-08-31T09:58:24,026   Source in /tmp/pip-wheel-ybwy4bli/pdbeccdutils_d91f4a3b6b3946098a12e00390ad7447 has version 0.8.1, which satisfies requirement pdbeccdutils==0.8.1 from https://files.pythonhosted.org/packages/22/19/9066e642f24f6ea00e1ee877e087dc137b377fedb254742b1ad856688547/pdbeccdutils-0.8.1.tar.gz
2023-08-31T09:58:24,027   Removed pdbeccdutils==0.8.1 from https://files.pythonhosted.org/packages/22/19/9066e642f24f6ea00e1ee877e087dc137b377fedb254742b1ad856688547/pdbeccdutils-0.8.1.tar.gz from build tracker '/tmp/pip-build-tracker-1yq1rc76'
2023-08-31T09:58:24,034 Created temporary directory: /tmp/pip-unpack-4dvfy2fe
2023-08-31T09:58:24,034 Building wheels for collected packages: pdbeccdutils
2023-08-31T09:58:24,038   Created temporary directory: /tmp/pip-wheel-12au1gip
2023-08-31T09:58:24,039   Building wheel for pdbeccdutils (setup.py): started
2023-08-31T09:58:24,040   Destination directory: /tmp/pip-wheel-12au1gip
2023-08-31T09:58:24,040   Running command python setup.py bdist_wheel
2023-08-31T09:58:24,686   running bdist_wheel
2023-08-31T09:58:25,029   running build
2023-08-31T09:58:25,030   running build_py
2023-08-31T09:58:25,059   creating build
2023-08-31T09:58:25,060   creating build/lib
2023-08-31T09:58:25,060   creating build/lib/doc
2023-08-31T09:58:25,062   copying doc/conf.py -> build/lib/doc
2023-08-31T09:58:25,065   creating build/lib/pdbeccdutils
2023-08-31T09:58:25,065   copying pdbeccdutils/__init__.py -> build/lib/pdbeccdutils
2023-08-31T09:58:25,068   creating build/lib/pdbeccdutils/utils
2023-08-31T09:58:25,069   copying pdbeccdutils/utils/web_services.py -> build/lib/pdbeccdutils/utils
2023-08-31T09:58:25,071   copying pdbeccdutils/utils/config.py -> build/lib/pdbeccdutils/utils
2023-08-31T09:58:25,073   copying pdbeccdutils/utils/pubchem_downloader.py -> build/lib/pdbeccdutils/utils
2023-08-31T09:58:25,075   copying pdbeccdutils/utils/__init__.py -> build/lib/pdbeccdutils/utils
2023-08-31T09:58:25,077   creating build/lib/pdbeccdutils/computations
2023-08-31T09:58:25,078   copying pdbeccdutils/computations/parity_method.py -> build/lib/pdbeccdutils/computations
2023-08-31T09:58:25,080   copying pdbeccdutils/computations/__init__.py -> build/lib/pdbeccdutils/computations
2023-08-31T09:58:25,083   creating build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,084   copying pdbeccdutils/tests/test_web_services.py -> build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,086   copying pdbeccdutils/tests/test_helper_methods.py -> build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,088   copying pdbeccdutils/tests/test_clc_reader.py -> build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,090   copying pdbeccdutils/tests/test_fragment_library.py -> build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,091   copying pdbeccdutils/tests/test_load_eoh_cif.py -> build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,093   copying pdbeccdutils/tests/test_property_generation.py -> build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,095   copying pdbeccdutils/tests/tst_utilities.py -> build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,097   copying pdbeccdutils/tests/test_file_writing.py -> build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,099   copying pdbeccdutils/tests/test_process_components_cif_cli.py -> build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,101   copying pdbeccdutils/tests/test_boundmolecule_cli.py -> build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,103   copying pdbeccdutils/tests/test_scaffold_generation.py -> build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,105   copying pdbeccdutils/tests/test_write_img.py -> build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,107   copying pdbeccdutils/tests/conftest.py -> build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,109   copying pdbeccdutils/tests/test_residue.py -> build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,111   copying pdbeccdutils/tests/test_rdkit_fixtures.py -> build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,113   copying pdbeccdutils/tests/test_inchi_key_matches.py -> build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,115   copying pdbeccdutils/tests/test_clc_writer.py -> build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,116   copying pdbeccdutils/tests/test_bound_molecule.py -> build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,118   copying pdbeccdutils/tests/test_parity.py -> build/lib/pdbeccdutils/tests
2023-08-31T09:58:25,121   creating build/lib/pdbeccdutils/core
2023-08-31T09:58:25,122   copying pdbeccdutils/core/ccd_writer.py -> build/lib/pdbeccdutils/core
2023-08-31T09:58:25,125   copying pdbeccdutils/core/component.py -> build/lib/pdbeccdutils/core
2023-08-31T09:58:25,128   copying pdbeccdutils/core/boundmolecule.py -> build/lib/pdbeccdutils/core
2023-08-31T09:58:25,130   copying pdbeccdutils/core/models.py -> build/lib/pdbeccdutils/core
2023-08-31T09:58:25,132   copying pdbeccdutils/core/exceptions.py -> build/lib/pdbeccdutils/core
2023-08-31T09:58:25,134   copying pdbeccdutils/core/fragment_library.py -> build/lib/pdbeccdutils/core
2023-08-31T09:58:25,136   copying pdbeccdutils/core/clc_writer.py -> build/lib/pdbeccdutils/core
2023-08-31T09:58:25,139   copying pdbeccdutils/core/prd_reader.py -> build/lib/pdbeccdutils/core
2023-08-31T09:58:25,141   copying pdbeccdutils/core/depictions.py -> build/lib/pdbeccdutils/core
2023-08-31T09:58:25,143   copying pdbeccdutils/core/ccd_reader.py -> build/lib/pdbeccdutils/core
2023-08-31T09:58:25,145   copying pdbeccdutils/core/__init__.py -> build/lib/pdbeccdutils/core
2023-08-31T09:58:25,147   copying pdbeccdutils/core/prd_writer.py -> build/lib/pdbeccdutils/core
2023-08-31T09:58:25,149   copying pdbeccdutils/core/clc_reader.py -> build/lib/pdbeccdutils/core
2023-08-31T09:58:25,152   creating build/lib/pdbeccdutils/helpers
2023-08-31T09:58:25,153   copying pdbeccdutils/helpers/cif_tools.py -> build/lib/pdbeccdutils/helpers
2023-08-31T09:58:25,156   copying pdbeccdutils/helpers/conversions.py -> build/lib/pdbeccdutils/helpers
2023-08-31T09:58:25,157   copying pdbeccdutils/helpers/helper.py -> build/lib/pdbeccdutils/helpers
2023-08-31T09:58:25,160   copying pdbeccdutils/helpers/mol_tools.py -> build/lib/pdbeccdutils/helpers
2023-08-31T09:58:25,162   copying pdbeccdutils/helpers/__init__.py -> build/lib/pdbeccdutils/helpers
2023-08-31T09:58:25,163   copying pdbeccdutils/helpers/drawing.py -> build/lib/pdbeccdutils/helpers
2023-08-31T09:58:25,166   creating build/lib/pdbeccdutils/scripts
2023-08-31T09:58:25,167   copying pdbeccdutils/scripts/process_components_cif_cli.py -> build/lib/pdbeccdutils/scripts
2023-08-31T09:58:25,169   copying pdbeccdutils/scripts/boundmolecule_cli.py -> build/lib/pdbeccdutils/scripts
2023-08-31T09:58:25,172   copying pdbeccdutils/scripts/__init__.py -> build/lib/pdbeccdutils/scripts
2023-08-31T09:58:25,173   copying pdbeccdutils/scripts/setup_pubchem_library_cli.py -> build/lib/pdbeccdutils/scripts
2023-08-31T09:58:25,175   running egg_info
2023-08-31T09:58:25,236   writing pdbeccdutils.egg-info/PKG-INFO
2023-08-31T09:58:25,238   writing dependency_links to pdbeccdutils.egg-info/dependency_links.txt
2023-08-31T09:58:25,240   writing entry points to pdbeccdutils.egg-info/entry_points.txt
2023-08-31T09:58:25,242   writing requirements to pdbeccdutils.egg-info/requires.txt
2023-08-31T09:58:25,243   writing top-level names to pdbeccdutils.egg-info/top_level.txt
2023-08-31T09:58:25,278   reading manifest file 'pdbeccdutils.egg-info/SOURCES.txt'
2023-08-31T09:58:25,281   reading manifest template 'MANIFEST.in'
2023-08-31T09:58:25,283   adding license file 'LICENSE'
2023-08-31T09:58:25,288   writing manifest file 'pdbeccdutils.egg-info/SOURCES.txt'
2023-08-31T09:58:25,292   creating build/lib/pdbeccdutils/data
2023-08-31T09:58:25,293   copying pdbeccdutils/data/fragment_library.tsv -> build/lib/pdbeccdutils/data
2023-08-31T09:58:25,298   creating build/lib/pdbeccdutils/data/coordgen_templates
2023-08-31T09:58:25,299   copying pdbeccdutils/data/coordgen_templates/templates.mae -> build/lib/pdbeccdutils/data/coordgen_templates
2023-08-31T09:58:25,301   creating build/lib/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,302   copying pdbeccdutils/data/general_templates/adamantane.sdf -> build/lib/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,304   copying pdbeccdutils/data/general_templates/cube.sdf -> build/lib/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,307   copying pdbeccdutils/data/general_templates/decahydrocorrin.sdf -> build/lib/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,309   copying pdbeccdutils/data/general_templates/hem.sdf -> build/lib/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,311   copying pdbeccdutils/data/general_templates/nonbornane.sdf -> build/lib/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,313   copying pdbeccdutils/data/general_templates/phorbine.sdf -> build/lib/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,315   copying pdbeccdutils/data/general_templates/porphin.sdf -> build/lib/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,317   copying pdbeccdutils/data/general_templates/porphycene.sdf -> build/lib/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,319   copying pdbeccdutils/data/general_templates/ru_complex.sdf -> build/lib/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,321   copying pdbeccdutils/data/general_templates/ru_complex2.sdf -> build/lib/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,363   /home/piwheels/.local/lib/python3.9/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-08-31T09:58:25,363   !!

2023-08-31T09:58:25,363           ********************************************************************************
2023-08-31T09:58:25,363           Please avoid running ``setup.py`` directly.
2023-08-31T09:58:25,364           Instead, use pypa/build, pypa/installer, pypa/build or
2023-08-31T09:58:25,364           other standards-based tools.

2023-08-31T09:58:25,364           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-08-31T09:58:25,364           ********************************************************************************

2023-08-31T09:58:25,364   !!
2023-08-31T09:58:25,364     self.initialize_options()
2023-08-31T09:58:25,392   installing to build/bdist.linux-armv7l/wheel
2023-08-31T09:58:25,392   running install
2023-08-31T09:58:25,417   running install_lib
2023-08-31T09:58:25,446   creating build/bdist.linux-armv7l
2023-08-31T09:58:25,447   creating build/bdist.linux-armv7l/wheel
2023-08-31T09:58:25,449   creating build/bdist.linux-armv7l/wheel/doc
2023-08-31T09:58:25,450   copying build/lib/doc/conf.py -> build/bdist.linux-armv7l/wheel/doc
2023-08-31T09:58:25,453   creating build/bdist.linux-armv7l/wheel/pdbeccdutils
2023-08-31T09:58:25,454   creating build/bdist.linux-armv7l/wheel/pdbeccdutils/utils
2023-08-31T09:58:25,455   copying build/lib/pdbeccdutils/utils/web_services.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/utils
2023-08-31T09:58:25,457   copying build/lib/pdbeccdutils/utils/config.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/utils
2023-08-31T09:58:25,459   copying build/lib/pdbeccdutils/utils/pubchem_downloader.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/utils
2023-08-31T09:58:25,461   copying build/lib/pdbeccdutils/utils/__init__.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/utils
2023-08-31T09:58:25,463   creating build/bdist.linux-armv7l/wheel/pdbeccdutils/computations
2023-08-31T09:58:25,464   copying build/lib/pdbeccdutils/computations/parity_method.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/computations
2023-08-31T09:58:25,466   copying build/lib/pdbeccdutils/computations/__init__.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/computations
2023-08-31T09:58:25,468   creating build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,469   copying build/lib/pdbeccdutils/tests/test_web_services.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,471   copying build/lib/pdbeccdutils/tests/test_helper_methods.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,473   copying build/lib/pdbeccdutils/tests/test_clc_reader.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,475   copying build/lib/pdbeccdutils/tests/test_fragment_library.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,477   copying build/lib/pdbeccdutils/tests/test_load_eoh_cif.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,479   copying build/lib/pdbeccdutils/tests/test_property_generation.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,480   copying build/lib/pdbeccdutils/tests/tst_utilities.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,482   copying build/lib/pdbeccdutils/tests/test_file_writing.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,485   copying build/lib/pdbeccdutils/tests/test_process_components_cif_cli.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,487   copying build/lib/pdbeccdutils/tests/test_boundmolecule_cli.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,489   copying build/lib/pdbeccdutils/tests/test_scaffold_generation.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,491   copying build/lib/pdbeccdutils/tests/test_write_img.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,493   copying build/lib/pdbeccdutils/tests/conftest.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,495   copying build/lib/pdbeccdutils/tests/test_residue.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,497   copying build/lib/pdbeccdutils/tests/test_rdkit_fixtures.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,499   copying build/lib/pdbeccdutils/tests/test_inchi_key_matches.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,501   copying build/lib/pdbeccdutils/tests/test_clc_writer.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,503   copying build/lib/pdbeccdutils/tests/test_bound_molecule.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,504   copying build/lib/pdbeccdutils/tests/test_parity.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/tests
2023-08-31T09:58:25,507   creating build/bdist.linux-armv7l/wheel/pdbeccdutils/data
2023-08-31T09:58:25,508   creating build/bdist.linux-armv7l/wheel/pdbeccdutils/data/coordgen_templates
2023-08-31T09:58:25,512   copying build/lib/pdbeccdutils/data/coordgen_templates/templates.mae -> build/bdist.linux-armv7l/wheel/pdbeccdutils/data/coordgen_templates
2023-08-31T09:58:25,515   creating build/bdist.linux-armv7l/wheel/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,516   copying build/lib/pdbeccdutils/data/general_templates/porphycene.sdf -> build/bdist.linux-armv7l/wheel/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,518   copying build/lib/pdbeccdutils/data/general_templates/cube.sdf -> build/bdist.linux-armv7l/wheel/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,519   copying build/lib/pdbeccdutils/data/general_templates/phorbine.sdf -> build/bdist.linux-armv7l/wheel/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,521   copying build/lib/pdbeccdutils/data/general_templates/adamantane.sdf -> build/bdist.linux-armv7l/wheel/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,523   copying build/lib/pdbeccdutils/data/general_templates/porphin.sdf -> build/bdist.linux-armv7l/wheel/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,525   copying build/lib/pdbeccdutils/data/general_templates/ru_complex2.sdf -> build/bdist.linux-armv7l/wheel/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,526   copying build/lib/pdbeccdutils/data/general_templates/decahydrocorrin.sdf -> build/bdist.linux-armv7l/wheel/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,528   copying build/lib/pdbeccdutils/data/general_templates/hem.sdf -> build/bdist.linux-armv7l/wheel/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,530   copying build/lib/pdbeccdutils/data/general_templates/nonbornane.sdf -> build/bdist.linux-armv7l/wheel/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,532   copying build/lib/pdbeccdutils/data/general_templates/ru_complex.sdf -> build/bdist.linux-armv7l/wheel/pdbeccdutils/data/general_templates
2023-08-31T09:58:25,533   copying build/lib/pdbeccdutils/data/fragment_library.tsv -> build/bdist.linux-armv7l/wheel/pdbeccdutils/data
2023-08-31T09:58:25,540   creating build/bdist.linux-armv7l/wheel/pdbeccdutils/core
2023-08-31T09:58:25,541   copying build/lib/pdbeccdutils/core/ccd_writer.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/core
2023-08-31T09:58:25,544   copying build/lib/pdbeccdutils/core/component.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/core
2023-08-31T09:58:25,547   copying build/lib/pdbeccdutils/core/boundmolecule.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/core
2023-08-31T09:58:25,549   copying build/lib/pdbeccdutils/core/models.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/core
2023-08-31T09:58:25,552   copying build/lib/pdbeccdutils/core/exceptions.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/core
2023-08-31T09:58:25,553   copying build/lib/pdbeccdutils/core/fragment_library.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/core
2023-08-31T09:58:25,555   copying build/lib/pdbeccdutils/core/clc_writer.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/core
2023-08-31T09:58:25,558   copying build/lib/pdbeccdutils/core/prd_reader.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/core
2023-08-31T09:58:25,560   copying build/lib/pdbeccdutils/core/depictions.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/core
2023-08-31T09:58:25,562   copying build/lib/pdbeccdutils/core/ccd_reader.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/core
2023-08-31T09:58:25,564   copying build/lib/pdbeccdutils/core/__init__.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/core
2023-08-31T09:58:25,566   copying build/lib/pdbeccdutils/core/prd_writer.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/core
2023-08-31T09:58:25,568   copying build/lib/pdbeccdutils/core/clc_reader.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/core
2023-08-31T09:58:25,570   copying build/lib/pdbeccdutils/__init__.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils
2023-08-31T09:58:25,573   creating build/bdist.linux-armv7l/wheel/pdbeccdutils/helpers
2023-08-31T09:58:25,574   copying build/lib/pdbeccdutils/helpers/cif_tools.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/helpers
2023-08-31T09:58:25,576   copying build/lib/pdbeccdutils/helpers/conversions.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/helpers
2023-08-31T09:58:25,578   copying build/lib/pdbeccdutils/helpers/helper.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/helpers
2023-08-31T09:58:25,580   copying build/lib/pdbeccdutils/helpers/mol_tools.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/helpers
2023-08-31T09:58:25,582   copying build/lib/pdbeccdutils/helpers/__init__.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/helpers
2023-08-31T09:58:25,583   copying build/lib/pdbeccdutils/helpers/drawing.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/helpers
2023-08-31T09:58:25,586   creating build/bdist.linux-armv7l/wheel/pdbeccdutils/scripts
2023-08-31T09:58:25,587   copying build/lib/pdbeccdutils/scripts/process_components_cif_cli.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/scripts
2023-08-31T09:58:25,589   copying build/lib/pdbeccdutils/scripts/boundmolecule_cli.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/scripts
2023-08-31T09:58:25,592   copying build/lib/pdbeccdutils/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/scripts
2023-08-31T09:58:25,593   copying build/lib/pdbeccdutils/scripts/setup_pubchem_library_cli.py -> build/bdist.linux-armv7l/wheel/pdbeccdutils/scripts
2023-08-31T09:58:25,595   running install_egg_info
2023-08-31T09:58:25,627   Copying pdbeccdutils.egg-info to build/bdist.linux-armv7l/wheel/pdbeccdutils-0.8.1-py3.9.egg-info
2023-08-31T09:58:25,641   running install_scripts
2023-08-31T09:58:25,659   creating build/bdist.linux-armv7l/wheel/pdbeccdutils-0.8.1.dist-info/WHEEL
2023-08-31T09:58:25,662   creating '/tmp/pip-wheel-12au1gip/pdbeccdutils-0.8.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-08-31T09:58:25,664   adding 'doc/conf.py'
2023-08-31T09:58:25,666   adding 'pdbeccdutils/__init__.py'
2023-08-31T09:58:25,667   adding 'pdbeccdutils/computations/__init__.py'
2023-08-31T09:58:25,669   adding 'pdbeccdutils/computations/parity_method.py'
2023-08-31T09:58:25,670   adding 'pdbeccdutils/core/__init__.py'
2023-08-31T09:58:25,672   adding 'pdbeccdutils/core/boundmolecule.py'
2023-08-31T09:58:25,674   adding 'pdbeccdutils/core/ccd_reader.py'
2023-08-31T09:58:25,679   adding 'pdbeccdutils/core/ccd_writer.py'
2023-08-31T09:58:25,682   adding 'pdbeccdutils/core/clc_reader.py'
2023-08-31T09:58:25,685   adding 'pdbeccdutils/core/clc_writer.py'
2023-08-31T09:58:25,688   adding 'pdbeccdutils/core/component.py'
2023-08-31T09:58:25,690   adding 'pdbeccdutils/core/depictions.py'
2023-08-31T09:58:25,691   adding 'pdbeccdutils/core/exceptions.py'
2023-08-31T09:58:25,693   adding 'pdbeccdutils/core/fragment_library.py'
2023-08-31T09:58:25,695   adding 'pdbeccdutils/core/models.py'
2023-08-31T09:58:25,697   adding 'pdbeccdutils/core/prd_reader.py'
2023-08-31T09:58:25,699   adding 'pdbeccdutils/core/prd_writer.py'
2023-08-31T09:58:25,720   adding 'pdbeccdutils/data/fragment_library.tsv'
2023-08-31T09:58:25,724   adding 'pdbeccdutils/data/coordgen_templates/templates.mae'
2023-08-31T09:58:25,726   adding 'pdbeccdutils/data/general_templates/adamantane.sdf'
2023-08-31T09:58:25,727   adding 'pdbeccdutils/data/general_templates/cube.sdf'
2023-08-31T09:58:25,728   adding 'pdbeccdutils/data/general_templates/decahydrocorrin.sdf'
2023-08-31T09:58:25,729   adding 'pdbeccdutils/data/general_templates/hem.sdf'
2023-08-31T09:58:25,730   adding 'pdbeccdutils/data/general_templates/nonbornane.sdf'
2023-08-31T09:58:25,732   adding 'pdbeccdutils/data/general_templates/phorbine.sdf'
2023-08-31T09:58:25,733   adding 'pdbeccdutils/data/general_templates/porphin.sdf'
2023-08-31T09:58:25,734   adding 'pdbeccdutils/data/general_templates/porphycene.sdf'
2023-08-31T09:58:25,735   adding 'pdbeccdutils/data/general_templates/ru_complex.sdf'
2023-08-31T09:58:25,737   adding 'pdbeccdutils/data/general_templates/ru_complex2.sdf'
2023-08-31T09:58:25,738   adding 'pdbeccdutils/helpers/__init__.py'
2023-08-31T09:58:25,740   adding 'pdbeccdutils/helpers/cif_tools.py'
2023-08-31T09:58:25,741   adding 'pdbeccdutils/helpers/conversions.py'
2023-08-31T09:58:25,743   adding 'pdbeccdutils/helpers/drawing.py'
2023-08-31T09:58:25,745   adding 'pdbeccdutils/helpers/helper.py'
2023-08-31T09:58:25,747   adding 'pdbeccdutils/helpers/mol_tools.py'
2023-08-31T09:58:25,748   adding 'pdbeccdutils/scripts/__init__.py'
2023-08-31T09:58:25,750   adding 'pdbeccdutils/scripts/boundmolecule_cli.py'
2023-08-31T09:58:25,753   adding 'pdbeccdutils/scripts/process_components_cif_cli.py'
2023-08-31T09:58:25,754   adding 'pdbeccdutils/scripts/setup_pubchem_library_cli.py'
2023-08-31T09:58:25,756   adding 'pdbeccdutils/tests/conftest.py'
2023-08-31T09:58:25,757   adding 'pdbeccdutils/tests/test_bound_molecule.py'
2023-08-31T09:58:25,758   adding 'pdbeccdutils/tests/test_boundmolecule_cli.py'
2023-08-31T09:58:25,760   adding 'pdbeccdutils/tests/test_clc_reader.py'
2023-08-31T09:58:25,761   adding 'pdbeccdutils/tests/test_clc_writer.py'
2023-08-31T09:58:25,762   adding 'pdbeccdutils/tests/test_file_writing.py'
2023-08-31T09:58:25,764   adding 'pdbeccdutils/tests/test_fragment_library.py'
2023-08-31T09:58:25,765   adding 'pdbeccdutils/tests/test_helper_methods.py'
2023-08-31T09:58:25,766   adding 'pdbeccdutils/tests/test_inchi_key_matches.py'
2023-08-31T09:58:25,767   adding 'pdbeccdutils/tests/test_load_eoh_cif.py'
2023-08-31T09:58:25,769   adding 'pdbeccdutils/tests/test_parity.py'
2023-08-31T09:58:25,770   adding 'pdbeccdutils/tests/test_process_components_cif_cli.py'
2023-08-31T09:58:25,772   adding 'pdbeccdutils/tests/test_property_generation.py'
2023-08-31T09:58:25,773   adding 'pdbeccdutils/tests/test_rdkit_fixtures.py'
2023-08-31T09:58:25,774   adding 'pdbeccdutils/tests/test_residue.py'
2023-08-31T09:58:25,775   adding 'pdbeccdutils/tests/test_scaffold_generation.py'
2023-08-31T09:58:25,777   adding 'pdbeccdutils/tests/test_web_services.py'
2023-08-31T09:58:25,778   adding 'pdbeccdutils/tests/test_write_img.py'
2023-08-31T09:58:25,780   adding 'pdbeccdutils/tests/tst_utilities.py'
2023-08-31T09:58:25,781   adding 'pdbeccdutils/utils/__init__.py'
2023-08-31T09:58:25,782   adding 'pdbeccdutils/utils/config.py'
2023-08-31T09:58:25,784   adding 'pdbeccdutils/utils/pubchem_downloader.py'
2023-08-31T09:58:25,785   adding 'pdbeccdutils/utils/web_services.py'
2023-08-31T09:58:25,788   adding 'pdbeccdutils-0.8.1.dist-info/LICENSE'
2023-08-31T09:58:25,790   adding 'pdbeccdutils-0.8.1.dist-info/METADATA'
2023-08-31T09:58:25,791   adding 'pdbeccdutils-0.8.1.dist-info/WHEEL'
2023-08-31T09:58:25,792   adding 'pdbeccdutils-0.8.1.dist-info/entry_points.txt'
2023-08-31T09:58:25,793   adding 'pdbeccdutils-0.8.1.dist-info/top_level.txt'
2023-08-31T09:58:25,794   adding 'pdbeccdutils-0.8.1.dist-info/RECORD'
2023-08-31T09:58:25,798   removing build/bdist.linux-armv7l/wheel
2023-08-31T09:58:25,899   Building wheel for pdbeccdutils (setup.py): finished with status 'done'
2023-08-31T09:58:25,903   Created wheel for pdbeccdutils: filename=pdbeccdutils-0.8.1-py3-none-any.whl size=148506 sha256=bd70ba61f6fbd84f7d29411832a639ff5f88d16b3c532875ab9fe65893c4059c
2023-08-31T09:58:25,904   Stored in directory: /tmp/pip-ephem-wheel-cache-7uxkgosx/wheels/27/57/f5/257bc02ee532923e9d87668eba589276536ebb00c04f55cfe4
2023-08-31T09:58:25,918 Successfully built pdbeccdutils
2023-08-31T09:58:25,926 Removed build tracker: '/tmp/pip-build-tracker-1yq1rc76'