2023-08-31T12:22:03,581 Created temporary directory: /tmp/pip-build-tracker-xnyjcedo
2023-08-31T12:22:03,583 Initialized build tracking at /tmp/pip-build-tracker-xnyjcedo
2023-08-31T12:22:03,583 Created build tracker: /tmp/pip-build-tracker-xnyjcedo
2023-08-31T12:22:03,583 Entered build tracker: /tmp/pip-build-tracker-xnyjcedo
2023-08-31T12:22:03,583 Created temporary directory: /tmp/pip-wheel-mmoifa8u
2023-08-31T12:22:03,587 Created temporary directory: /tmp/pip-ephem-wheel-cache-4n8t2jlr
2023-08-31T12:22:03,609 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-08-31T12:22:03,613 2 location(s) to search for versions of moleculekit:
2023-08-31T12:22:03,613 * https://pypi.org/simple/moleculekit/
2023-08-31T12:22:03,613 * https://www.piwheels.org/simple/moleculekit/
2023-08-31T12:22:03,613 Fetching project page and analyzing links: https://pypi.org/simple/moleculekit/
2023-08-31T12:22:03,613 Getting page https://pypi.org/simple/moleculekit/
2023-08-31T12:22:03,615 Found index url https://pypi.org/simple/
2023-08-31T12:22:03,670 Fetched page https://pypi.org/simple/moleculekit/ as application/vnd.pypi.simple.v1+json
2023-08-31T12:22:03,707   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/91/e6/25b6853357dfef8a4026325e420d8213d34c17c078a2f13b60cbb6213ea3/moleculekit-0.1.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,707   Found link https://files.pythonhosted.org/packages/13/0f/a200e8e7632d3a521cfc7c15fa4d0270802efce40f98ac5a5cae58385b7e/moleculekit-0.1.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.4
2023-08-31T12:22:03,708   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/9f/a5/eac32fcb2e9ff0d30298aa4cec8e152c95d675c4dd1a1a5d7676986d4d75/moleculekit-0.1.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,708   Found link https://files.pythonhosted.org/packages/c5/6f/ae7d1b8513eb23ec0fa8e153c42fda0ee96f9e29c6e4808c5ff78c115e89/moleculekit-0.1.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.5
2023-08-31T12:22:03,708   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e2/51/0f4e4b95d0d5c16664ede7f2cd31e6d6003e9c940a8fbe28c74de91de627/moleculekit-0.1.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,708   Found link https://files.pythonhosted.org/packages/08/fa/bc1b5918a1715901fd0ea1e796de9e6647276943983962616f2ddceb1c3b/moleculekit-0.1.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.6
2023-08-31T12:22:03,708   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/49/59/ddf780e7a574dde727d5db8b93c41bcc3d19436a8ae9f468bad5ea48529e/moleculekit-0.1.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,709   Found link https://files.pythonhosted.org/packages/c7/cb/d1b609de2d59d10a60ca74c9d1a044534f608e323dc16a87e5bd77ee0eb0/moleculekit-0.1.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.7
2023-08-31T12:22:03,709   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5b/a4/59e6017c4e5b99be72d8e0eb6b6442061f338e309d91c25d607162298d11/moleculekit-0.1.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,709   Found link https://files.pythonhosted.org/packages/c0/1d/753c7461942457e39fb069504cdc381518a4ef18f486de0a42572236095e/moleculekit-0.1.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.8
2023-08-31T12:22:03,709   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/28/39/e4219020234475a17077f38ebcbdff236872d8e3a0455b376edb847f4141/moleculekit-0.1.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,710   Found link https://files.pythonhosted.org/packages/e0/c6/5d47b6257a3d1aca76d635d1dc8fffd6ed712fbe324bfeb2f2da47edda09/moleculekit-0.1.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.9
2023-08-31T12:22:03,710   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/12/42a0a156c8a51b2ef9de7c720cbcd226c1b0a7d13dce7dcdd4c34480e05f/moleculekit-0.1.12-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,710   Found link https://files.pythonhosted.org/packages/12/9d/ef12aeb7165210a6d06f5a735640db6c49cda2597bebb3584e72f7a2aee5/moleculekit-0.1.12.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.12
2023-08-31T12:22:03,710   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e0/de/ddea29e806547e8743801bd5b44f5f4b62e96a3b6aa1b59e7ae3c183e65d/moleculekit-0.1.14-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,711   Found link https://files.pythonhosted.org/packages/0f/b8/5dce8ade2a03ba18558275d58f1f586fc78b76442ca923e02e05b7aa4638/moleculekit-0.1.14.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.14
2023-08-31T12:22:03,711   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/98/67/c911fd0aab052ed8866739c282be96070bcafee75cad331165f356d0bf11/moleculekit-0.1.15-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,711   Found link https://files.pythonhosted.org/packages/be/5c/b803aa60ac93136e6fce9ab52ec50aec246481c5db76892780152f769d75/moleculekit-0.1.15.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.15
2023-08-31T12:22:03,711   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/4f/30/78d34f8541a5e0e7488b6d59c43b29cf4d9f42467553fb0cee41312409c7/moleculekit-0.1.16-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,712   Found link https://files.pythonhosted.org/packages/d3/39/0774efc740b7e6a6969e084e0eb126483049a60229de80cc09a1a4b78011/moleculekit-0.1.16.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.16
2023-08-31T12:22:03,712   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/ca/d8/f9dd491ee5984f59dbd1206bb41062543e1a1664bb002d4b2675ec3f882c/moleculekit-0.1.17-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,712   Found link https://files.pythonhosted.org/packages/f6/27/b820e1158e448f35830265eeb023ec7d7cc72272136a31ec5365a893174f/moleculekit-0.1.17.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.17
2023-08-31T12:22:03,712   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0d/df/1d0dfd734e1d67c6ba1a1291b6f530c60eb3a65c25e2990d0fb62c73dbea/moleculekit-0.1.19-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,712   Found link https://files.pythonhosted.org/packages/6e/55/28d041ad7324e063e00ed2e0a5cd91d4c67e6cda3e62c24ab9c3ea2ad5dc/moleculekit-0.1.19.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.19
2023-08-31T12:22:03,713   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f0/f3/18f3b015e5fdf04c0243d63132d4d29ab807b608bda9cab6de505c060196/moleculekit-0.1.21-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,713   Found link https://files.pythonhosted.org/packages/d7/2f/510d466d4e507523c6f8bb5323a03351e0a9e6422b29ab7a9d7b34101484/moleculekit-0.1.21.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.21
2023-08-31T12:22:03,713   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/2c/83/5bdc26bbc9c0dc6b7fa54260134f5545c6f8c01e50b4cc94de02d0a2f295/moleculekit-0.1.22-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,713   Found link https://files.pythonhosted.org/packages/28/80/3c053d293b0aad5df512b8c7bf1ef111c621ee80bbe08ea83763ca004a85/moleculekit-0.1.22.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.22
2023-08-31T12:22:03,714   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5d/ec/9e6438a424607cba93fe71b89ef89dbff35369f133ed76ded895861ab290/moleculekit-0.1.23-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,714   Found link https://files.pythonhosted.org/packages/6d/c3/680633af7541d2c7ecf2fde4dc9661f107efaf55688d3f41d15407cb2248/moleculekit-0.1.23.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.23
2023-08-31T12:22:03,714   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0b/02/f2bbd133b7e76a60bdc1d92d10621ce9f60f8eeaf97ed7dacae2e216cb2b/moleculekit-0.1.24-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,714   Found link https://files.pythonhosted.org/packages/7f/f7/48b8b09fbf6e368925a186ef4cb874ae0abfae6d5b81bd2656502290add5/moleculekit-0.1.24.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.24
2023-08-31T12:22:03,715   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/1e/bd/24146e575547d1fc8bd24b4b7d9a57cbe14c357ebf85d638df6421412465/moleculekit-0.1.26-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,715   Found link https://files.pythonhosted.org/packages/f5/6e/a9dafd4b3b109011d156a6f7c726925669e42435b6049859f3a0a050a87f/moleculekit-0.1.26.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.26
2023-08-31T12:22:03,715   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/fe/63/a0e65b18866805186e3a4ba2b8ece20b73b85ec1ce6b3f8597e0c2508178/moleculekit-0.1.27-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,715   Found link https://files.pythonhosted.org/packages/70/7e/a01a54d9e88eaf00ec47989f360fb98d58e871d500aa28c44b9c7b8bd7ff/moleculekit-0.1.27.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.27
2023-08-31T12:22:03,716   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f1/db/8f0879b07acae5356393297640e1116c459d28b59d19e1bd328da94e4b7a/moleculekit-0.1.29-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,716   Found link https://files.pythonhosted.org/packages/dc/10/67c6720423554f257425330caf21342c13c59bc86aee634f369b481dad7b/moleculekit-0.1.29.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.29
2023-08-31T12:22:03,716   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/83/f1/2cb963c0a74d919761e8516fe969330c122c9874426ff8eef7834b9b0c62/moleculekit-0.1.30-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,716   Found link https://files.pythonhosted.org/packages/a9/87/cd070158b979d89c02edf2a1deb98ced11e6a442952ed67ebb4f281d6700/moleculekit-0.1.30.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.30
2023-08-31T12:22:03,717   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cf/c4/f211cc80e281f1ee01040cfa490a65e874a54b5bedf2dfd73e3be6e72d93/moleculekit-0.1.31-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,717   Found link https://files.pythonhosted.org/packages/d7/8b/2b012f3371e5fceb875601e16c83a0ddfd5602d1cdceb953a4b36fc12200/moleculekit-0.1.31.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.31
2023-08-31T12:22:03,717   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/bf/2e/56178883cad4d2429d5cb5fb23d17be42663dea6da428df98f2b70be67a3/moleculekit-0.1.32-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,717   Found link https://files.pythonhosted.org/packages/97/34/992324fd9f1bb4d151b3383f601e3b69810e62c9d3530580ae8b43c4dcca/moleculekit-0.1.32.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.32
2023-08-31T12:22:03,717   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7e/84/8e678afbcbd29c9b462973571bf3a043a7b5dbf7a98f1ac3dc82c3f5fc91/moleculekit-0.2.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,718   Found link https://files.pythonhosted.org/packages/10/f8/dfc9b84d16081239c0b6e3a2896e59db9f8b8617a67b7585e98789942324/moleculekit-0.2.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.0
2023-08-31T12:22:03,718   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cb/a7/e706e1daa9d60d9ca9a96436564ec0612fe5fc850fdabad6e0c5174d52c5/moleculekit-0.2.1-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,718   Found link https://files.pythonhosted.org/packages/a8/ad/3c01c094324fcaf3a516aa3ab376ae4bec251dc2005f172217368e97b1db/moleculekit-0.2.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.1
2023-08-31T12:22:03,718   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/30/c3/e618404cdeb463f4f5f8fbfa1d5d45a81ea3c31cef86e9c6ca14a3d64589/moleculekit-0.2.2-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,719   Found link https://files.pythonhosted.org/packages/ce/2a/e4f0ea22c4e3be055409fbe8cda7802bd2cd1095926f62f2c78b7f447b46/moleculekit-0.2.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.2
2023-08-31T12:22:03,719   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/c6/baf4c6dafa42a7f055cd29cad8a79b2e99baaf474e8ddcff833e02a8c9a2/moleculekit-0.2.3-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,719   Found link https://files.pythonhosted.org/packages/92/3b/d42fa900fbc359ad0b7806344c2eb303f06336fc6bad439db5550483ce5c/moleculekit-0.2.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.3
2023-08-31T12:22:03,719   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/d7/72/5674ef2a697583774eb66559f23b37026098badcc7e14bb09247c112baec/moleculekit-0.2.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,720   Found link https://files.pythonhosted.org/packages/7c/f3/5372063ddc10f57f1ea1aa29ab3f06d98d3d29c22d2a3d0c7c318ff7dc4a/moleculekit-0.2.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.4
2023-08-31T12:22:03,720   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/35/99/9bc21e28d9d4007623055b30fc43d18464649dfa39703ea80e9c32ba4607/moleculekit-0.2.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,720   Found link https://files.pythonhosted.org/packages/dd/7a/f6d8ac771d9e4c9117ab098a281231e6c4c3fadbbeafce69ac5b8370f2bd/moleculekit-0.2.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.5
2023-08-31T12:22:03,720   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/97/2d/1b5aeecf49f225f13c39534c7a93181f14bbb295f4b0bb50019d7efda717/moleculekit-0.2.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,720   Found link https://files.pythonhosted.org/packages/8a/04/f032c25621eac9ccab21dd25c0cb5d7150a21a5b0cde5ae21adb3e2be933/moleculekit-0.2.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.6
2023-08-31T12:22:03,721   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7b/c3/6023b75cb8d60607d1932a6f3fa1fee5c99e88b692f25e3ed0072a4812a5/moleculekit-0.2.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,721   Found link https://files.pythonhosted.org/packages/a6/68/1eb4fb904763839ec4df4eab490702bd7245a6848ebfb693b165d5fbb153/moleculekit-0.2.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.7
2023-08-31T12:22:03,721   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/a3/85/452591c89b66659eaf24e216aef7818e3061a78bb1fc832f8616808949d4/moleculekit-0.2.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,721   Found link https://files.pythonhosted.org/packages/68/e0/0fe1302790061ea9e59370a988d67b877642c45a9e6d725819118cc3aae1/moleculekit-0.2.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.8
2023-08-31T12:22:03,722   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/90/90/238209bf8023d0779c0d4a9592786cc94e69d3dde60b5b17473d57c97b60/moleculekit-0.2.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-08-31T12:22:03,722   Found link https://files.pythonhosted.org/packages/bd/ad/aa7f2c7343506e17f61f2c4223dc912d4f099fdcc3e1736f393c9c31e118/moleculekit-0.2.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.9
2023-08-31T12:22:03,722   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/40/39/e7c3ea68289cf49ac58a53a55de11c71471a26c55268ce2a11dd3d0f4b1d/moleculekit-0.3.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
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2023-08-31T12:22:03,745   Found link https://files.pythonhosted.org/packages/3c/b6/64b6ae76e4b562d453b31fd28678232838949d56f1dafabd12531362de23/moleculekit-1.1.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.1
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2023-08-31T12:22:03,746   Found link https://files.pythonhosted.org/packages/71/3c/15df00803c890b9d17390a31c60fa2c070a88e8a8c33c79ef10ddf023159/moleculekit-1.1.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.7
2023-08-31T12:22:03,746   Found link https://files.pythonhosted.org/packages/eb/2e/c50f42aefc5f3510073bd5059723baff738a5ee171174441586000c444dc/moleculekit-1.1.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.8
2023-08-31T12:22:03,746   Found link https://files.pythonhosted.org/packages/59/b9/6e9913fc67fa6321d5c441eb59a93e257f1fba383848a6bd645a7d427045/moleculekit-1.1.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.9
2023-08-31T12:22:03,747   Found link https://files.pythonhosted.org/packages/06/90/69685dad023515e231d8da7747793f33c497bb62496c4075e518f230da55/moleculekit-1.2.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.0
2023-08-31T12:22:03,747   Found link https://files.pythonhosted.org/packages/1a/07/36426e9820ea0ecff884e15fc9ebe413735a2b22a9212cdcbb9b62e56744/moleculekit-1.2.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.1
2023-08-31T12:22:03,747   Found link https://files.pythonhosted.org/packages/a1/56/2e1ac2fac4f566abf327baf326d17421047e363138c1c132a537a3eaf5ec/moleculekit-1.2.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.2
2023-08-31T12:22:03,747   Found link https://files.pythonhosted.org/packages/cb/28/b8fa8b94edf207d206627fcb18753ce3fad1450d7d5e5b052daa211b226b/moleculekit-1.2.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.4
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2023-08-31T12:22:03,748   Found link https://files.pythonhosted.org/packages/39/b3/50e46e2780075c4adf93bba603ad047457f3d9cd70a77f4909776ec446b3/moleculekit-1.2.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.7
2023-08-31T12:22:03,748   Found link https://files.pythonhosted.org/packages/29/f1/10cd916b3024b2efe08c06413dff5938859e01c8bc671cde8bf070758031/moleculekit-1.2.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.8
2023-08-31T12:22:03,748   Found link https://files.pythonhosted.org/packages/47/55/207179562e46a3cba4a1cb813c1754be6c5a1664a11d1dcffe89b51c1ca4/moleculekit-1.2.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.9
2023-08-31T12:22:03,749   Found link https://files.pythonhosted.org/packages/2e/1c/a07b4d5f471fc90ba12e88e44675ddbf0ba4b0a658c2fc014491a7a27092/moleculekit-1.3.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.0
2023-08-31T12:22:03,749   Found link https://files.pythonhosted.org/packages/80/9b/d0375ea58246506494224acf560e8d2da623d1635047089316a01ab146a0/moleculekit-1.3.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.1
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2023-08-31T12:22:03,763   Found link https://files.pythonhosted.org/packages/bd/54/7eaec59ff225b186934cbe0ea2e709af1864cac674dc9c8f2e7cf2d8adeb/moleculekit-1.6.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.9
2023-08-31T12:22:03,764   Found link https://files.pythonhosted.org/packages/3d/e9/5d17d4e81b5894b9ace33d43b373881813b8a68b0a1365d7590990c5c370/moleculekit-1.7.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.0
2023-08-31T12:22:03,764   Found link https://files.pythonhosted.org/packages/4e/3a/29fb1aa0e3792fef88348885348370f39af453fb75d5505a208068d1c4ac/moleculekit-1.7.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.1
2023-08-31T12:22:03,765   Found link https://files.pythonhosted.org/packages/4a/13/dd6711d592d27e604c48830300f5596aafa1bbc479dc5eb49ed9797085eb/moleculekit-1.7.2.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.2
2023-08-31T12:22:03,766   Found link https://files.pythonhosted.org/packages/c7/cb/205d8925276863e2892c2c1ae2747cd4834cd3f174521172670ce43b50b8/moleculekit-1.7.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.3
2023-08-31T12:22:03,766   Found link https://files.pythonhosted.org/packages/6f/9e/2bce5993679a3666fd12803b93bb9a4daa59922f0ecdd26e9726df5d7f73/moleculekit-1.7.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.4
2023-08-31T12:22:03,767   Found link https://files.pythonhosted.org/packages/fa/63/993d55964a5afc9417ca31ab06a7d08f10b8fb38c63157bef0f350b4bb49/moleculekit-1.7.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.6
2023-08-31T12:22:03,767   Found link https://files.pythonhosted.org/packages/9b/3d/351d6444550ae455f20139e1d71ab138449c75b4a9782ac831dc9c6daa76/moleculekit-1.7.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.7
2023-08-31T12:22:03,768   Found link https://files.pythonhosted.org/packages/1b/7a/80d740239c506d7eea7cdba7576c503012556338861c10d5d2908e1912f7/moleculekit-1.7.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.8
2023-08-31T12:22:03,768 Fetching project page and analyzing links: https://www.piwheels.org/simple/moleculekit/
2023-08-31T12:22:03,769 Getting page https://www.piwheels.org/simple/moleculekit/
2023-08-31T12:22:03,770 Found index url https://www.piwheels.org/simple/
2023-08-31T12:22:03,942 Fetched page https://www.piwheels.org/simple/moleculekit/ as text/html
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2023-08-31T12:22:04,005   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.4.8-cp39-cp39-linux_armv6l.whl#sha256=04b80834389619f511934db60c45649252288c6a8320edfb0b3e7b2bda32ee5b (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-08-31T12:22:04,005   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.4.6-cp39-cp39-linux_armv7l.whl#sha256=c81af8eb30e31f41a57d6e31c2e4d4a5a6f85041fe9f79dcd843adf62c919a7a (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2023-08-31T12:22:04,006   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.14-cp39-cp39-linux_armv7l.whl#sha256=9462e9f87eb4aec5ac63c9df15de09cdce7d94fe44a0708d7ee525e983ff1830 (from https://www.piwheels.org/simple/moleculekit/)
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2023-08-31T12:22:04,006   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.14-cp37-cp37m-linux_armv7l.whl#sha256=5bc2de8230ca38d840e6f86860f469828a1720a95c76726db1ecb07a8af6de91 (from https://www.piwheels.org/simple/moleculekit/)
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2023-08-31T12:22:04,006   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp39-cp39-linux_armv7l.whl#sha256=413233b9ea619a276a0cc4911cee59417c2be694ab30c5c5c836a31391e5b6c4 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,007   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp39-cp39-linux_armv6l.whl#sha256=413233b9ea619a276a0cc4911cee59417c2be694ab30c5c5c836a31391e5b6c4 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,007   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp37-cp37m-linux_armv7l.whl#sha256=ef137737db23a1f54c74776c99ac718685db863975d888a3e219900b5874fe45 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,007   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp37-cp37m-linux_armv6l.whl#sha256=ef137737db23a1f54c74776c99ac718685db863975d888a3e219900b5874fe45 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,007   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp39-cp39-linux_armv7l.whl#sha256=d75d99aa397ece4f4d163fff8e78e6868ccbab4190016befc567c5f08d1cbbd4 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,007   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp39-cp39-linux_armv6l.whl#sha256=d75d99aa397ece4f4d163fff8e78e6868ccbab4190016befc567c5f08d1cbbd4 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,007   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp37-cp37m-linux_armv7l.whl#sha256=a871d3b206f986ddc16b14a1e59904384aea1d6936948be45d6d3d05211637c4 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,008   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp37-cp37m-linux_armv6l.whl#sha256=a871d3b206f986ddc16b14a1e59904384aea1d6936948be45d6d3d05211637c4 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,008   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp39-cp39-linux_armv7l.whl#sha256=0d0004615c5da8823417816aa8e72f2ac2a2993c01c9ffa07540521dd44cdeb9 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,008   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp39-cp39-linux_armv6l.whl#sha256=0d0004615c5da8823417816aa8e72f2ac2a2993c01c9ffa07540521dd44cdeb9 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,008   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp37-cp37m-linux_armv7l.whl#sha256=66dbff1fb6cecaa00851b6b78480b3d8eb3f5f5d9aae539ad9397ec3dc9b22d8 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,008   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp37-cp37m-linux_armv6l.whl#sha256=66dbff1fb6cecaa00851b6b78480b3d8eb3f5f5d9aae539ad9397ec3dc9b22d8 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,009   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp39-cp39-linux_armv7l.whl#sha256=72aada7099cf1c7fbed38107b64c08622659cb763f35e5f2b75052a08f5cb853 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,009   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp39-cp39-linux_armv6l.whl#sha256=72aada7099cf1c7fbed38107b64c08622659cb763f35e5f2b75052a08f5cb853 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,009   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp37-cp37m-linux_armv7l.whl#sha256=e8d8fc1d3f31a50afae4252a2c403fb5b928eff4452d3954322d0d9b2d5383c5 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,009   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp37-cp37m-linux_armv6l.whl#sha256=e8d8fc1d3f31a50afae4252a2c403fb5b928eff4452d3954322d0d9b2d5383c5 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,009   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp39-cp39-linux_armv7l.whl#sha256=b1bfb9de96ef11fdd768cccd1b894300c470a7389f83c8cca3f42ac636f3dcb7 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,010   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp39-cp39-linux_armv6l.whl#sha256=b1bfb9de96ef11fdd768cccd1b894300c470a7389f83c8cca3f42ac636f3dcb7 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,010   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp37-cp37m-linux_armv7l.whl#sha256=8e98ed7e4f43a05739fbb98f22bc0aeabe5d6a76673b8883a4fa88c3762ba080 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,010   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp37-cp37m-linux_armv6l.whl#sha256=8e98ed7e4f43a05739fbb98f22bc0aeabe5d6a76673b8883a4fa88c3762ba080 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,010   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp39-cp39-linux_armv7l.whl#sha256=de2e9946d86d3e6deb732605b7b9804d3ee229e0d1e869093c26731ff1cf6e49 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,010   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp39-cp39-linux_armv6l.whl#sha256=de2e9946d86d3e6deb732605b7b9804d3ee229e0d1e869093c26731ff1cf6e49 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,010   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp37-cp37m-linux_armv7l.whl#sha256=881a09b6497cca181f77a3388648b0ec90974f79d8c81513666ac38dbed69842 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,011   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp37-cp37m-linux_armv6l.whl#sha256=881a09b6497cca181f77a3388648b0ec90974f79d8c81513666ac38dbed69842 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,011   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp39-cp39-linux_armv7l.whl#sha256=f42eb6c315d3242355c8e36090f1f77ed92b768cefb595178e81eb89fa5a79d5 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,011   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp39-cp39-linux_armv6l.whl#sha256=f42eb6c315d3242355c8e36090f1f77ed92b768cefb595178e81eb89fa5a79d5 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,011   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv7l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,011   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv6l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,012   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv7l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,012   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv6l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,012   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv7l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,012   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv6l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,012   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp39-cp39-linux_armv7l.whl#sha256=c666ea91f79ecf6c6d99ca251e7f938e7e82208a01a91d39b827ba64eee4ce41 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,013   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp39-cp39-linux_armv6l.whl#sha256=c666ea91f79ecf6c6d99ca251e7f938e7e82208a01a91d39b827ba64eee4ce41 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,013   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp37-cp37m-linux_armv7l.whl#sha256=286faceca4683f35ce8e9aeefefdecee1c02150dfc9b7deb62015ce17f3f557c (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,013   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp37-cp37m-linux_armv6l.whl#sha256=286faceca4683f35ce8e9aeefefdecee1c02150dfc9b7deb62015ce17f3f557c (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,013   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp39-cp39-linux_armv7l.whl#sha256=390edc2399f77605c97d9fc8db3b63f282ba297c67fe9514db91ebec945fa2d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,013   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp39-cp39-linux_armv6l.whl#sha256=390edc2399f77605c97d9fc8db3b63f282ba297c67fe9514db91ebec945fa2d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,013   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv7l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,014   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv6l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,014   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv7l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,014   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv6l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,014   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv7l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,014   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv6l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,015   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv7l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,015   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv6l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,015   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv7l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,015   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv6l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,015   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv7l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,016   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv6l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,016   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv7l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,016   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv6l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,016   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv7l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,016   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv6l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,016   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv7l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,017   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv6l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,017   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv7l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,017   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv6l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,017   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv7l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,017   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv6l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,018   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv7l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,018   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv6l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,018   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv7l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,018   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv6l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,018   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv7l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,019   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv6l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,019   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv7l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,019   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv6l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,019   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp39-cp39-linux_armv7l.whl#sha256=41b03e81b9cd75c716643741a53b8d4d5aeb1633b5e07091c1a7355b6b44d233 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,019   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp39-cp39-linux_armv6l.whl#sha256=41b03e81b9cd75c716643741a53b8d4d5aeb1633b5e07091c1a7355b6b44d233 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,019   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp37-cp37m-linux_armv7l.whl#sha256=584155aa2ddfa324fcd872934f8b25a296c40b34797209bb754f4a641a5b27eb (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,020   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp37-cp37m-linux_armv6l.whl#sha256=584155aa2ddfa324fcd872934f8b25a296c40b34797209bb754f4a641a5b27eb (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,020   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp39-cp39-linux_armv7l.whl#sha256=1b6361e98ea6ec0f3a7a4cce9ec9569a117c26deb95d0ce2bcea9d6f1f38d503 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,020   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp39-cp39-linux_armv6l.whl#sha256=1b6361e98ea6ec0f3a7a4cce9ec9569a117c26deb95d0ce2bcea9d6f1f38d503 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,020   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp37-cp37m-linux_armv7l.whl#sha256=b0ac5fea57fee9d962de25688ffde053c705daa15588886ea6aa7d5ab0986077 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,020   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp37-cp37m-linux_armv6l.whl#sha256=b0ac5fea57fee9d962de25688ffde053c705daa15588886ea6aa7d5ab0986077 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,021   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp39-cp39-linux_armv7l.whl#sha256=223cbac9f53d732be3d157f8e68c124c79439d057ec079594c681d7c5327f342 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,021   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp39-cp39-linux_armv6l.whl#sha256=223cbac9f53d732be3d157f8e68c124c79439d057ec079594c681d7c5327f342 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,021   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp37-cp37m-linux_armv7l.whl#sha256=a6ee5c9ac5b2648bb87ca08a6491d955004770b58180224d6d24bdb8cec17458 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,021   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp37-cp37m-linux_armv6l.whl#sha256=a6ee5c9ac5b2648bb87ca08a6491d955004770b58180224d6d24bdb8cec17458 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,021   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp39-cp39-linux_armv7l.whl#sha256=c18e44dbd9cf047134d440ff4fbb18722a3fdb0f348d431e8b7bed7dd398bd6e (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,021   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp39-cp39-linux_armv6l.whl#sha256=c18e44dbd9cf047134d440ff4fbb18722a3fdb0f348d431e8b7bed7dd398bd6e (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,022   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp37-cp37m-linux_armv7l.whl#sha256=19e3b710f4af1a0cb530060979c4216d87f0bd8a71e9f41824cf3565abbcbbdb (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,022   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp37-cp37m-linux_armv6l.whl#sha256=19e3b710f4af1a0cb530060979c4216d87f0bd8a71e9f41824cf3565abbcbbdb (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,022   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp39-cp39-linux_armv7l.whl#sha256=53a48e2a1781a9ae00e1f905778bad58715b08cff2ed4605148de1e481c9d50e (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,022   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp39-cp39-linux_armv6l.whl#sha256=53a48e2a1781a9ae00e1f905778bad58715b08cff2ed4605148de1e481c9d50e (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,022   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp37-cp37m-linux_armv7l.whl#sha256=8e63b6afb6715f46aae20e77b81958cdc652a7b1b6d294c5d559f7f06d5a5106 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,023   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp37-cp37m-linux_armv6l.whl#sha256=8e63b6afb6715f46aae20e77b81958cdc652a7b1b6d294c5d559f7f06d5a5106 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,023   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp39-cp39-linux_armv7l.whl#sha256=d5e470ed8514697a92a69cccdc99ddf6da22ddde2cc24b3e6ed949645778116f (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,023   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp39-cp39-linux_armv6l.whl#sha256=d5e470ed8514697a92a69cccdc99ddf6da22ddde2cc24b3e6ed949645778116f (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,023   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp37-cp37m-linux_armv7l.whl#sha256=a85d0cfa7da9e3593e97f1c63822eb0a9733744fdeb19c3bbd09e1f4242e1d91 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,023   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp37-cp37m-linux_armv6l.whl#sha256=a85d0cfa7da9e3593e97f1c63822eb0a9733744fdeb19c3bbd09e1f4242e1d91 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,024   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp39-cp39-linux_armv7l.whl#sha256=55bb6252b29c31ce9b46ca6dc68ed50a4fbe0e44a1b3f8f6f57b13faf1c939c1 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,024   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp39-cp39-linux_armv6l.whl#sha256=55bb6252b29c31ce9b46ca6dc68ed50a4fbe0e44a1b3f8f6f57b13faf1c939c1 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,024   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp37-cp37m-linux_armv7l.whl#sha256=2670c23b960766e0d52c54881bf4a8a663345f17190e380f84a273d51c8cdb3f (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,024   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp37-cp37m-linux_armv6l.whl#sha256=2670c23b960766e0d52c54881bf4a8a663345f17190e380f84a273d51c8cdb3f (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,024   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp39-cp39-linux_armv7l.whl#sha256=8c575ac103cbab0a21e8ac9ee5d64f45634da6dcfa639e87f54e4afd333fe22f (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,024   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp39-cp39-linux_armv6l.whl#sha256=8c575ac103cbab0a21e8ac9ee5d64f45634da6dcfa639e87f54e4afd333fe22f (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,025   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp37-cp37m-linux_armv7l.whl#sha256=c59aab79b14443a5c4194c3a08c69a2f1a98abedfda3217c0b15e5f694cb8dc3 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,025   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp37-cp37m-linux_armv6l.whl#sha256=c59aab79b14443a5c4194c3a08c69a2f1a98abedfda3217c0b15e5f694cb8dc3 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,025   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp39-cp39-linux_armv7l.whl#sha256=6975400d079ca432444a3145d286b6b9c52b60c61acfbb1ad67be92f2b7a4585 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,025   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp39-cp39-linux_armv6l.whl#sha256=6975400d079ca432444a3145d286b6b9c52b60c61acfbb1ad67be92f2b7a4585 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,025   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp37-cp37m-linux_armv7l.whl#sha256=e6497cd1fa524aee3c9d431fc1556e29e1ff896a6c49eca8572fb6ffc399cd6c (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,026   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp37-cp37m-linux_armv6l.whl#sha256=e6497cd1fa524aee3c9d431fc1556e29e1ff896a6c49eca8572fb6ffc399cd6c (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,026   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.5.4-py3-none-any.whl#sha256=9ea33917985ebf7bdfdbb276c83c4b2b1be17adbefb6062cc28c7ac037e3fab8 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,026   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.5.3-py3-none-any.whl#sha256=60b48ad38d8567be173c2a4a384dd7d742cf0b9f80eac5510c5987a9e1b668b6 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,026   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.5.2-py3-none-any.whl#sha256=89c944d279cde5c1d1ea898c4495e8076b1a1c477f1594f024110adcb137070e (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,026   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.8-py3-none-any.whl#sha256=9f728761688514ebb5e7fbd00f93960d862d928411f697f3beaf5c05b55bcd29 (from https://www.piwheels.org/simple/moleculekit/)
2023-08-31T12:22:04,027   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.7-py3-none-any.whl#sha256=0167204d0c1ad4269753d9981920d6d47d0936fa85f5a709716abe11f2f63924 (from https://www.piwheels.org/simple/moleculekit/)
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2023-08-31T12:22:04,034 Skipping link: not a file: https://www.piwheels.org/simple/moleculekit/
2023-08-31T12:22:04,034 Skipping link: not a file: https://pypi.org/simple/moleculekit/
2023-08-31T12:22:04,073 Given no hashes to check 1 links for project 'moleculekit': discarding no candidates
2023-08-31T12:22:04,093 Collecting moleculekit==1.7.8
2023-08-31T12:22:04,095   Created temporary directory: /tmp/pip-unpack-pnakw846
2023-08-31T12:22:04,751   Downloading moleculekit-1.7.8.tar.gz (6.2 MB)
2023-08-31T12:22:07,450   Added moleculekit==1.7.8 from https://files.pythonhosted.org/packages/1b/7a/80d740239c506d7eea7cdba7576c503012556338861c10d5d2908e1912f7/moleculekit-1.7.8.tar.gz to build tracker '/tmp/pip-build-tracker-xnyjcedo'
2023-08-31T12:22:07,458   Created temporary directory: /tmp/pip-build-env-ejzrvs55
2023-08-31T12:22:07,469   Installing build dependencies: started
2023-08-31T12:22:07,470   Running command pip subprocess to install build dependencies
2023-08-31T12:22:08,754   Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9)
2023-08-31T12:22:09,151   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-08-31T12:22:10,800   Collecting setuptools
2023-08-31T12:22:10,868     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.1.2-py3-none-any.whl (805 kB)
2023-08-31T12:22:12,139   Collecting numpy>=1.18.5
2023-08-31T12:22:13,020     Using cached https://www.piwheels.org/simple/numpy/numpy-1.25.2-cp39-cp39-linux_armv7l.whl (12.5 MB)
2023-08-31T12:22:14,946   Collecting Cython>=0.29.21
2023-08-31T12:22:15,698     Using cached https://www.piwheels.org/simple/cython/Cython-3.0.2-cp39-cp39-linux_armv7l.whl (10.7 MB)
2023-08-31T12:22:16,045   Collecting toml
2023-08-31T12:22:16,062     Using cached https://www.piwheels.org/simple/toml/toml-0.10.2-py2.py3-none-any.whl (16 kB)
2023-08-31T12:22:16,161   Collecting versioneer[toml]==0.28
2023-08-31T12:22:16,180     Using cached https://www.piwheels.org/simple/versioneer/versioneer-0.28-py3-none-any.whl (45 kB)
2023-08-31T12:22:16,306   Collecting tomli (from versioneer[toml]==0.28)
2023-08-31T12:22:16,321     Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB)
2023-08-31T12:22:18,185   Installing collected packages: versioneer, tomli, toml, setuptools, numpy, Cython
2023-08-31T12:22:18,221     Creating /tmp/pip-build-env-ejzrvs55/overlay/bin
2023-08-31T12:22:18,223     changing mode of /tmp/pip-build-env-ejzrvs55/overlay/bin/versioneer to 755
2023-08-31T12:22:28,834     changing mode of /tmp/pip-build-env-ejzrvs55/overlay/bin/f2py to 755
2023-08-31T12:22:28,837     changing mode of /tmp/pip-build-env-ejzrvs55/overlay/bin/f2py3 to 755
2023-08-31T12:22:28,839     changing mode of /tmp/pip-build-env-ejzrvs55/overlay/bin/f2py3.9 to 755
2023-08-31T12:22:32,241     changing mode of /tmp/pip-build-env-ejzrvs55/overlay/bin/cygdb to 755
2023-08-31T12:22:32,243     changing mode of /tmp/pip-build-env-ejzrvs55/overlay/bin/cython to 755
2023-08-31T12:22:32,245     changing mode of /tmp/pip-build-env-ejzrvs55/overlay/bin/cythonize to 755
2023-08-31T12:22:32,271   ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.
2023-08-31T12:22:32,271   scipy 1.8.1 requires numpy<1.25.0,>=1.17.3, but you have numpy 1.25.2 which is incompatible.
2023-08-31T12:22:32,272   Successfully installed Cython-3.0.2 numpy-1.25.2 setuptools-68.1.2 toml-0.10.2 tomli-2.0.1 versioneer-0.28

2023-08-31T12:22:32,285   [notice] A new release of pip is available: 23.1.2 -> 23.2.1
2023-08-31T12:22:32,285   [notice] To update, run: python3 -m pip install --upgrade pip
2023-08-31T12:22:32,683   Installing build dependencies: finished with status 'done'
2023-08-31T12:22:32,688   Getting requirements to build wheel: started
2023-08-31T12:22:32,689   Running command Getting requirements to build wheel
2023-08-31T12:23:11,014   Compiling moleculekit/interactions/hbonds/hbonds.pyx because it depends on /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-08-31T12:23:11,014   Compiling moleculekit/interactions/pipi/pipi.pyx because it depends on /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-08-31T12:23:11,015   Compiling moleculekit/interactions/cationpi/cationpi.pyx because it depends on /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-08-31T12:23:11,015   Compiling moleculekit/interactions/sigmahole/sigmahole.pyx because it depends on /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-08-31T12:23:11,015   Compiling moleculekit/wrapping/wrapping.pyx because it depends on /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-08-31T12:23:11,015   Compiling moleculekit/bondguesser_utils/bondguesser_utils.pyx because it depends on /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-08-31T12:23:11,015   Compiling moleculekit/atomselect_utils/atomselect_utils.pyx because it depends on /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-08-31T12:23:11,015   Compiling moleculekit/distance_utils/distance_utils.pyx because it depends on /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-08-31T12:23:11,016   Compiling moleculekit/occupancy_utils/occupancy_utils.pyx because it depends on /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-08-31T12:23:11,016   Compiling moleculekit/xtc_utils/xtc.pyx because it depends on /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-08-31T12:23:11,016   Compiling moleculekit/tmalign/tmalign_util.pyx because it depends on /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-08-31T12:23:11,016   [ 1/11] Cythonizing moleculekit/atomselect_utils/atomselect_utils.pyx
2023-08-31T12:23:11,016   [ 2/11] Cythonizing moleculekit/bondguesser_utils/bondguesser_utils.pyx
2023-08-31T12:23:11,016   [ 3/11] Cythonizing moleculekit/distance_utils/distance_utils.pyx
2023-08-31T12:23:11,017   [ 4/11] Cythonizing moleculekit/interactions/cationpi/cationpi.pyx
2023-08-31T12:23:11,017   [ 5/11] Cythonizing moleculekit/interactions/hbonds/hbonds.pyx
2023-08-31T12:23:11,017   [ 6/11] Cythonizing moleculekit/interactions/pipi/pipi.pyx
2023-08-31T12:23:11,017   [ 7/11] Cythonizing moleculekit/interactions/sigmahole/sigmahole.pyx
2023-08-31T12:23:11,017   [ 8/11] Cythonizing moleculekit/occupancy_utils/occupancy_utils.pyx
2023-08-31T12:23:11,017   [ 9/11] Cythonizing moleculekit/tmalign/tmalign_util.pyx
2023-08-31T12:23:11,017   [10/11] Cythonizing moleculekit/wrapping/wrapping.pyx
2023-08-31T12:23:11,018   [11/11] Cythonizing moleculekit/xtc_utils/xtc.pyx
2023-08-31T12:23:11,308   running egg_info
2023-08-31T12:23:11,315   writing moleculekit.egg-info/PKG-INFO
2023-08-31T12:23:11,317   writing dependency_links to moleculekit.egg-info/dependency_links.txt
2023-08-31T12:23:11,319   writing requirements to moleculekit.egg-info/requires.txt
2023-08-31T12:23:11,320   writing top-level names to moleculekit.egg-info/top_level.txt
2023-08-31T12:23:11,345   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
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2023-08-31T12:23:11,345   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:11,346   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:11,346   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:11,346   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
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2023-08-31T12:23:11,346   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
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2023-08-31T12:23:11,346   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:11,347   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
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2023-08-31T12:23:11,350   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
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2023-08-31T12:23:11,350   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:11,350   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
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2023-08-31T12:23:11,351   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:11,351   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:11,351   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:11,351   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
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2023-08-31T12:23:11,352   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
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2023-08-31T12:23:11,361   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-08-31T12:23:11,395   reading manifest template 'MANIFEST.in'
2023-08-31T12:23:11,640   no previously-included directories found matching 'moleculekit/test-data'
2023-08-31T12:23:11,641   no previously-included directories found matching 'moleculekit/tests'
2023-08-31T12:23:11,642   no previously-included directories found matching 'package'
2023-08-31T12:23:11,642   adding license file 'LICENSE'
2023-08-31T12:23:11,659   writing manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-08-31T12:23:12,621   Getting requirements to build wheel: finished with status 'done'
2023-08-31T12:23:12,636   Installing backend dependencies: started
2023-08-31T12:23:12,636   Running command pip subprocess to install backend dependencies
2023-08-31T12:23:13,893   Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9)
2023-08-31T12:23:14,290   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-08-31T12:23:14,739   Collecting wheel
2023-08-31T12:23:14,757     Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB)
2023-08-31T12:23:16,246   Installing collected packages: wheel
2023-08-31T12:23:16,469     Creating /tmp/pip-build-env-ejzrvs55/normal/bin
2023-08-31T12:23:16,471     changing mode of /tmp/pip-build-env-ejzrvs55/normal/bin/wheel to 755
2023-08-31T12:23:16,484   Successfully installed wheel-0.41.2

2023-08-31T12:23:16,497   [notice] A new release of pip is available: 23.1.2 -> 23.2.1
2023-08-31T12:23:16,497   [notice] To update, run: python3 -m pip install --upgrade pip
2023-08-31T12:23:16,707   Installing backend dependencies: finished with status 'done'
2023-08-31T12:23:16,710   Created temporary directory: /tmp/pip-modern-metadata-1jkbq9gs
2023-08-31T12:23:16,713   Preparing metadata (pyproject.toml): started
2023-08-31T12:23:16,714   Running command Preparing metadata (pyproject.toml)
2023-08-31T12:23:19,122   running dist_info
2023-08-31T12:23:19,124   creating /tmp/pip-modern-metadata-1jkbq9gs/moleculekit.egg-info
2023-08-31T12:23:19,130   writing /tmp/pip-modern-metadata-1jkbq9gs/moleculekit.egg-info/PKG-INFO
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2023-08-31T12:23:19,170   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:19,170   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:19,170   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:19,170   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:19,170   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:19,170   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:19,171   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:19,171   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:19,171   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:19,171   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:19,171   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:19,171   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:19,171   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:19,172   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:19,172   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:19,172   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:19,172   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:19,179   reading manifest file '/tmp/pip-modern-metadata-1jkbq9gs/moleculekit.egg-info/SOURCES.txt'
2023-08-31T12:23:19,181   reading manifest template 'MANIFEST.in'
2023-08-31T12:23:19,444   no previously-included directories found matching 'moleculekit/test-data'
2023-08-31T12:23:19,445   no previously-included directories found matching 'moleculekit/tests'
2023-08-31T12:23:19,446   no previously-included directories found matching 'package'
2023-08-31T12:23:19,446   adding license file 'LICENSE'
2023-08-31T12:23:19,458   writing manifest file '/tmp/pip-modern-metadata-1jkbq9gs/moleculekit.egg-info/SOURCES.txt'
2023-08-31T12:23:19,467   creating '/tmp/pip-modern-metadata-1jkbq9gs/moleculekit-1.7.8.dist-info'
2023-08-31T12:23:19,670   Preparing metadata (pyproject.toml): finished with status 'done'
2023-08-31T12:23:19,676   Source in /tmp/pip-wheel-mmoifa8u/moleculekit_7b6cf3fd1ace41d5b8825ea278f73787 has version 1.7.8, which satisfies requirement moleculekit==1.7.8 from https://files.pythonhosted.org/packages/1b/7a/80d740239c506d7eea7cdba7576c503012556338861c10d5d2908e1912f7/moleculekit-1.7.8.tar.gz
2023-08-31T12:23:19,677   Removed moleculekit==1.7.8 from https://files.pythonhosted.org/packages/1b/7a/80d740239c506d7eea7cdba7576c503012556338861c10d5d2908e1912f7/moleculekit-1.7.8.tar.gz from build tracker '/tmp/pip-build-tracker-xnyjcedo'
2023-08-31T12:23:19,684 Created temporary directory: /tmp/pip-unpack-5sl95gqs
2023-08-31T12:23:19,684 Building wheels for collected packages: moleculekit
2023-08-31T12:23:19,689   Created temporary directory: /tmp/pip-wheel-5fd4d3go
2023-08-31T12:23:19,689   Destination directory: /tmp/pip-wheel-5fd4d3go
2023-08-31T12:23:19,691   Building wheel for moleculekit (pyproject.toml): started
2023-08-31T12:23:19,692   Running command Building wheel for moleculekit (pyproject.toml)
2023-08-31T12:23:21,958   running bdist_wheel
2023-08-31T12:23:21,975   running build
2023-08-31T12:23:21,975   running build_py
2023-08-31T12:23:21,983   creating build
2023-08-31T12:23:21,983   creating build/lib.linux-armv7l-cpython-39
2023-08-31T12:23:21,984   creating build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:21,985   copying moleculekit/home.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:21,987   copying moleculekit/pymolgraphics.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:21,989   copying moleculekit/bondguesser.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:21,991   copying moleculekit/align.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:21,993   copying moleculekit/config.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:21,995   copying moleculekit/vmdgraphics.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:21,997   copying moleculekit/_version.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:21,999   copying moleculekit/dihedral.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:22,000   copying moleculekit/rcsb.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:22,002   copying moleculekit/writers.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:22,005   copying moleculekit/distance.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:22,007   copying moleculekit/periodictable.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:22,009   copying moleculekit/vmdviewer.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:22,011   copying moleculekit/viewer.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:22,014   copying moleculekit/molecule.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:22,019   copying moleculekit/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:22,021   copying moleculekit/readers.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:22,025   copying moleculekit/rdkitintegration.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:22,026   copying moleculekit/util.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:22,029   copying moleculekit/version.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:22,030   copying moleculekit/opm.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:22,033   creating build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-08-31T12:23:22,034   copying moleculekit/atomselect/analyze.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-08-31T12:23:22,036   copying moleculekit/atomselect/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-08-31T12:23:22,038   copying moleculekit/atomselect/languageparser.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-08-31T12:23:22,040   copying moleculekit/atomselect/atomselect.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-08-31T12:23:22,043   creating build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-08-31T12:23:22,044   copying moleculekit/smallmol/smallmol.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-08-31T12:23:22,047   copying moleculekit/smallmol/test_smallmol.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-08-31T12:23:22,049   copying moleculekit/smallmol/test_smallmollib.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-08-31T12:23:22,051   copying moleculekit/smallmol/smallmollib.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-08-31T12:23:22,054   copying moleculekit/smallmol/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-08-31T12:23:22,055   copying moleculekit/smallmol/util.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-08-31T12:23:22,058   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx
2023-08-31T12:23:22,059   copying moleculekit/pdbx/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx
2023-08-31T12:23:22,061   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions
2023-08-31T12:23:22,061   copying moleculekit/interactions/interactions.py -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions
2023-08-31T12:23:22,064   copying moleculekit/interactions/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions
2023-08-31T12:23:22,067   creating build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-08-31T12:23:22,068   copying moleculekit/tools/preparation.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-08-31T12:23:22,071   copying moleculekit/tools/detect.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-08-31T12:23:22,073   copying moleculekit/tools/docking.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-08-31T12:23:22,075   copying moleculekit/tools/voxeldescriptors.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-08-31T12:23:22,078   copying moleculekit/tools/preparation_customres.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-08-31T12:23:22,080   copying moleculekit/tools/graphalignment.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-08-31T12:23:22,082   copying moleculekit/tools/autosegment.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-08-31T12:23:22,084   copying moleculekit/tools/moleculechecks.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-08-31T12:23:22,086   copying moleculekit/tools/crystalpacking.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-08-31T12:23:22,088   copying moleculekit/tools/hhblitsprofile.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-08-31T12:23:22,090   copying moleculekit/tools/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-08-31T12:23:22,091   copying moleculekit/tools/sequencestructuralalignment.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-08-31T12:23:22,093   copying moleculekit/tools/atomtyper.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-08-31T12:23:22,097   creating build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-08-31T12:23:22,098   copying moleculekit/projections/metricsasa.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-08-31T12:23:22,100   copying moleculekit/projections/projection.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-08-31T12:23:22,101   copying moleculekit/projections/metricsecondarystructure.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-08-31T12:23:22,104   copying moleculekit/projections/metricdihedral.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-08-31T12:23:22,106   copying moleculekit/projections/metricrmsd.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-08-31T12:23:22,108   copying moleculekit/projections/metricsphericalcoordinate.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-08-31T12:23:22,110   copying moleculekit/projections/metricdistance.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-08-31T12:23:22,113   copying moleculekit/projections/metriccoordinate.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-08-31T12:23:22,115   copying moleculekit/projections/metricplumed2.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-08-31T12:23:22,117   copying moleculekit/projections/metricshell.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-08-31T12:23:22,119   copying moleculekit/projections/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-08-31T12:23:22,121   copying moleculekit/projections/metricgyration.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-08-31T12:23:22,123   copying moleculekit/projections/util.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-08-31T12:23:22,125   copying moleculekit/projections/metrictmscore.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-08-31T12:23:22,127   copying moleculekit/projections/metricfluctuation.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-08-31T12:23:22,130   creating build/lib.linux-armv7l-cpython-39/moleculekit/ply
2023-08-31T12:23:22,130   copying moleculekit/ply/lex.py -> build/lib.linux-armv7l-cpython-39/moleculekit/ply
2023-08-31T12:23:22,133   copying moleculekit/ply/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/ply
2023-08-31T12:23:22,135   copying moleculekit/ply/yacc.py -> build/lib.linux-armv7l-cpython-39/moleculekit/ply
2023-08-31T12:23:22,140   creating build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-08-31T12:23:22,141   copying moleculekit/smallmol/tools/test_tools.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-08-31T12:23:22,143   copying moleculekit/smallmol/tools/clustering.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-08-31T12:23:22,145   copying moleculekit/smallmol/tools/restrainedembed.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-08-31T12:23:22,147   copying moleculekit/smallmol/tools/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-08-31T12:23:22,149   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-08-31T12:23:22,150   copying moleculekit/pdbx/tests/PdbxReaderTests.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-08-31T12:23:22,152   copying moleculekit/pdbx/tests/PdbxWriterTests.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-08-31T12:23:22,153   copying moleculekit/pdbx/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-08-31T12:23:22,155   copying moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-08-31T12:23:22,158   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-08-31T12:23:22,158   copying moleculekit/pdbx/reader/PdbxParser.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-08-31T12:23:22,161   copying moleculekit/pdbx/reader/PdbxContainers.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-08-31T12:23:22,163   copying moleculekit/pdbx/reader/PdbxReader.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-08-31T12:23:22,166   copying moleculekit/pdbx/reader/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-08-31T12:23:22,167   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer
2023-08-31T12:23:22,168   copying moleculekit/pdbx/writer/PdbxWriter.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer
2023-08-31T12:23:22,170   copying moleculekit/pdbx/writer/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer
2023-08-31T12:23:22,172   creating build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools
2023-08-31T12:23:22,173   copying moleculekit/tools/obabel_tools/obabel_cli.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools
2023-08-31T12:23:22,175   copying moleculekit/tools/obabel_tools/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools
2023-08-31T12:23:22,176   running egg_info
2023-08-31T12:23:22,182   writing moleculekit.egg-info/PKG-INFO
2023-08-31T12:23:22,183   writing dependency_links to moleculekit.egg-info/dependency_links.txt
2023-08-31T12:23:22,185   writing requirements to moleculekit.egg-info/requires.txt
2023-08-31T12:23:22,186   writing top-level names to moleculekit.egg-info/top_level.txt
2023-08-31T12:23:22,199   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,199   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,200   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,200   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,200   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,200   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,200   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,200   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,200   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,201   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,201   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,201   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,201   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,201   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,201   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,201   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,201   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,202   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,202   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,202   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,202   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,202   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,202   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,202   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,203   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,203   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,203   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,203   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,203   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,203   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,203   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,203   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,204   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,204   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,204   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,204   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,204   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,204   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,204   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,204   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,205   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,205   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,205   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,205   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,205   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,205   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,205   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,206   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,206   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,206   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,206   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,206   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,206   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,206   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,206   dependency /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-08-31T12:23:22,213   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-08-31T12:23:22,221   reading manifest template 'MANIFEST.in'
2023-08-31T12:23:22,451   no previously-included directories found matching 'moleculekit/test-data'
2023-08-31T12:23:22,452   no previously-included directories found matching 'moleculekit/tests'
2023-08-31T12:23:22,453   no previously-included directories found matching 'package'
2023-08-31T12:23:22,453   adding license file 'LICENSE'
2023-08-31T12:23:22,470   writing manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-08-31T12:23:22,481   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.atomselect_utils' is absent from the `packages` configuration.
2023-08-31T12:23:22,481   !!

2023-08-31T12:23:22,481           ********************************************************************************
2023-08-31T12:23:22,481           ############################
2023-08-31T12:23:22,481           # Package would be ignored #
2023-08-31T12:23:22,482           ############################
2023-08-31T12:23:22,482           Python recognizes 'moleculekit.atomselect_utils' as an importable package[^1],
2023-08-31T12:23:22,482           but it is absent from setuptools' `packages` configuration.

2023-08-31T12:23:22,482           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-31T12:23:22,482           package, please make sure that 'moleculekit.atomselect_utils' is explicitly added
2023-08-31T12:23:22,482           to the `packages` configuration field.

2023-08-31T12:23:22,483           Alternatively, you can also rely on setuptools' discovery methods
2023-08-31T12:23:22,483           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-31T12:23:22,483           instead of `find_packages(...)`/`find:`).

2023-08-31T12:23:22,483           You can read more about "package discovery" on setuptools documentation page:

2023-08-31T12:23:22,483           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-31T12:23:22,483           If you don't want 'moleculekit.atomselect_utils' to be distributed and are
2023-08-31T12:23:22,484           already explicitly excluding 'moleculekit.atomselect_utils' via
2023-08-31T12:23:22,484           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-31T12:23:22,484           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-31T12:23:22,484           combination with a more fine grained `package-data` configuration.

2023-08-31T12:23:22,484           You can read more about "package data files" on setuptools documentation page:

2023-08-31T12:23:22,484           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-31T12:23:22,485           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-31T12:23:22,485                 even if it does not contain any `.py` files.
2023-08-31T12:23:22,485                 On the other hand, currently there is no concept of package data
2023-08-31T12:23:22,485                 directory, all directories are treated like packages.
2023-08-31T12:23:22,485           ********************************************************************************

2023-08-31T12:23:22,486   !!
2023-08-31T12:23:22,486     check.warn(importable)
2023-08-31T12:23:22,486   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.bondguesser_utils' is absent from the `packages` configuration.
2023-08-31T12:23:22,486   !!

2023-08-31T12:23:22,486           ********************************************************************************
2023-08-31T12:23:22,486           ############################
2023-08-31T12:23:22,486           # Package would be ignored #
2023-08-31T12:23:22,487           ############################
2023-08-31T12:23:22,487           Python recognizes 'moleculekit.bondguesser_utils' as an importable package[^1],
2023-08-31T12:23:22,487           but it is absent from setuptools' `packages` configuration.

2023-08-31T12:23:22,487           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-31T12:23:22,487           package, please make sure that 'moleculekit.bondguesser_utils' is explicitly added
2023-08-31T12:23:22,487           to the `packages` configuration field.

2023-08-31T12:23:22,487           Alternatively, you can also rely on setuptools' discovery methods
2023-08-31T12:23:22,488           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-31T12:23:22,488           instead of `find_packages(...)`/`find:`).

2023-08-31T12:23:22,488           You can read more about "package discovery" on setuptools documentation page:

2023-08-31T12:23:22,488           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-31T12:23:22,488           If you don't want 'moleculekit.bondguesser_utils' to be distributed and are
2023-08-31T12:23:22,488           already explicitly excluding 'moleculekit.bondguesser_utils' via
2023-08-31T12:23:22,489           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-31T12:23:22,489           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-31T12:23:22,489           combination with a more fine grained `package-data` configuration.

2023-08-31T12:23:22,489           You can read more about "package data files" on setuptools documentation page:

2023-08-31T12:23:22,489           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-31T12:23:22,490           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-31T12:23:22,490                 even if it does not contain any `.py` files.
2023-08-31T12:23:22,490                 On the other hand, currently there is no concept of package data
2023-08-31T12:23:22,490                 directory, all directories are treated like packages.
2023-08-31T12:23:22,490           ********************************************************************************

2023-08-31T12:23:22,490   !!
2023-08-31T12:23:22,490     check.warn(importable)
2023-08-31T12:23:22,491   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.distance_utils' is absent from the `packages` configuration.
2023-08-31T12:23:22,491   !!

2023-08-31T12:23:22,491           ********************************************************************************
2023-08-31T12:23:22,491           ############################
2023-08-31T12:23:22,491           # Package would be ignored #
2023-08-31T12:23:22,491           ############################
2023-08-31T12:23:22,491           Python recognizes 'moleculekit.distance_utils' as an importable package[^1],
2023-08-31T12:23:22,491           but it is absent from setuptools' `packages` configuration.

2023-08-31T12:23:22,492           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-31T12:23:22,492           package, please make sure that 'moleculekit.distance_utils' is explicitly added
2023-08-31T12:23:22,492           to the `packages` configuration field.

2023-08-31T12:23:22,492           Alternatively, you can also rely on setuptools' discovery methods
2023-08-31T12:23:22,492           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-31T12:23:22,492           instead of `find_packages(...)`/`find:`).

2023-08-31T12:23:22,493           You can read more about "package discovery" on setuptools documentation page:

2023-08-31T12:23:22,493           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-31T12:23:22,493           If you don't want 'moleculekit.distance_utils' to be distributed and are
2023-08-31T12:23:22,493           already explicitly excluding 'moleculekit.distance_utils' via
2023-08-31T12:23:22,493           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-31T12:23:22,493           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-31T12:23:22,493           combination with a more fine grained `package-data` configuration.

2023-08-31T12:23:22,494           You can read more about "package data files" on setuptools documentation page:

2023-08-31T12:23:22,494           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-31T12:23:22,494           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-31T12:23:22,494                 even if it does not contain any `.py` files.
2023-08-31T12:23:22,495                 On the other hand, currently there is no concept of package data
2023-08-31T12:23:22,495                 directory, all directories are treated like packages.
2023-08-31T12:23:22,495           ********************************************************************************

2023-08-31T12:23:22,495   !!
2023-08-31T12:23:22,495     check.warn(importable)
2023-08-31T12:23:22,495   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.cationpi' is absent from the `packages` configuration.
2023-08-31T12:23:22,495   !!

2023-08-31T12:23:22,496           ********************************************************************************
2023-08-31T12:23:22,496           ############################
2023-08-31T12:23:22,496           # Package would be ignored #
2023-08-31T12:23:22,496           ############################
2023-08-31T12:23:22,496           Python recognizes 'moleculekit.interactions.cationpi' as an importable package[^1],
2023-08-31T12:23:22,496           but it is absent from setuptools' `packages` configuration.

2023-08-31T12:23:22,496           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-31T12:23:22,496           package, please make sure that 'moleculekit.interactions.cationpi' is explicitly added
2023-08-31T12:23:22,497           to the `packages` configuration field.

2023-08-31T12:23:22,497           Alternatively, you can also rely on setuptools' discovery methods
2023-08-31T12:23:22,497           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-31T12:23:22,497           instead of `find_packages(...)`/`find:`).

2023-08-31T12:23:22,497           You can read more about "package discovery" on setuptools documentation page:

2023-08-31T12:23:22,497           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-31T12:23:22,498           If you don't want 'moleculekit.interactions.cationpi' to be distributed and are
2023-08-31T12:23:22,498           already explicitly excluding 'moleculekit.interactions.cationpi' via
2023-08-31T12:23:22,498           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-31T12:23:22,498           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-31T12:23:22,498           combination with a more fine grained `package-data` configuration.

2023-08-31T12:23:22,498           You can read more about "package data files" on setuptools documentation page:

2023-08-31T12:23:22,499           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-31T12:23:22,499           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-31T12:23:22,499                 even if it does not contain any `.py` files.
2023-08-31T12:23:22,499                 On the other hand, currently there is no concept of package data
2023-08-31T12:23:22,499                 directory, all directories are treated like packages.
2023-08-31T12:23:22,499           ********************************************************************************

2023-08-31T12:23:22,500   !!
2023-08-31T12:23:22,500     check.warn(importable)
2023-08-31T12:23:22,500   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.hbonds' is absent from the `packages` configuration.
2023-08-31T12:23:22,500   !!

2023-08-31T12:23:22,500           ********************************************************************************
2023-08-31T12:23:22,500           ############################
2023-08-31T12:23:22,500           # Package would be ignored #
2023-08-31T12:23:22,500           ############################
2023-08-31T12:23:22,501           Python recognizes 'moleculekit.interactions.hbonds' as an importable package[^1],
2023-08-31T12:23:22,501           but it is absent from setuptools' `packages` configuration.

2023-08-31T12:23:22,501           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-31T12:23:22,501           package, please make sure that 'moleculekit.interactions.hbonds' is explicitly added
2023-08-31T12:23:22,501           to the `packages` configuration field.

2023-08-31T12:23:22,501           Alternatively, you can also rely on setuptools' discovery methods
2023-08-31T12:23:22,501           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-31T12:23:22,502           instead of `find_packages(...)`/`find:`).

2023-08-31T12:23:22,502           You can read more about "package discovery" on setuptools documentation page:

2023-08-31T12:23:22,502           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-31T12:23:22,502           If you don't want 'moleculekit.interactions.hbonds' to be distributed and are
2023-08-31T12:23:22,502           already explicitly excluding 'moleculekit.interactions.hbonds' via
2023-08-31T12:23:22,502           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-31T12:23:22,503           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-31T12:23:22,503           combination with a more fine grained `package-data` configuration.

2023-08-31T12:23:22,503           You can read more about "package data files" on setuptools documentation page:

2023-08-31T12:23:22,503           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-31T12:23:22,503           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-31T12:23:22,504                 even if it does not contain any `.py` files.
2023-08-31T12:23:22,504                 On the other hand, currently there is no concept of package data
2023-08-31T12:23:22,504                 directory, all directories are treated like packages.
2023-08-31T12:23:22,504           ********************************************************************************

2023-08-31T12:23:22,504   !!
2023-08-31T12:23:22,504     check.warn(importable)
2023-08-31T12:23:22,505   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.pipi' is absent from the `packages` configuration.
2023-08-31T12:23:22,505   !!

2023-08-31T12:23:22,505           ********************************************************************************
2023-08-31T12:23:22,505           ############################
2023-08-31T12:23:22,505           # Package would be ignored #
2023-08-31T12:23:22,505           ############################
2023-08-31T12:23:22,505           Python recognizes 'moleculekit.interactions.pipi' as an importable package[^1],
2023-08-31T12:23:22,505           but it is absent from setuptools' `packages` configuration.

2023-08-31T12:23:22,506           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-31T12:23:22,506           package, please make sure that 'moleculekit.interactions.pipi' is explicitly added
2023-08-31T12:23:22,506           to the `packages` configuration field.

2023-08-31T12:23:22,506           Alternatively, you can also rely on setuptools' discovery methods
2023-08-31T12:23:22,506           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-31T12:23:22,506           instead of `find_packages(...)`/`find:`).

2023-08-31T12:23:22,507           You can read more about "package discovery" on setuptools documentation page:

2023-08-31T12:23:22,507           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-31T12:23:22,507           If you don't want 'moleculekit.interactions.pipi' to be distributed and are
2023-08-31T12:23:22,507           already explicitly excluding 'moleculekit.interactions.pipi' via
2023-08-31T12:23:22,507           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-31T12:23:22,507           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-31T12:23:22,507           combination with a more fine grained `package-data` configuration.

2023-08-31T12:23:22,508           You can read more about "package data files" on setuptools documentation page:

2023-08-31T12:23:22,508           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-31T12:23:22,508           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-31T12:23:22,508                 even if it does not contain any `.py` files.
2023-08-31T12:23:22,508                 On the other hand, currently there is no concept of package data
2023-08-31T12:23:22,509                 directory, all directories are treated like packages.
2023-08-31T12:23:22,509           ********************************************************************************

2023-08-31T12:23:22,509   !!
2023-08-31T12:23:22,509     check.warn(importable)
2023-08-31T12:23:22,509   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.sigmahole' is absent from the `packages` configuration.
2023-08-31T12:23:22,509   !!

2023-08-31T12:23:22,509           ********************************************************************************
2023-08-31T12:23:22,510           ############################
2023-08-31T12:23:22,510           # Package would be ignored #
2023-08-31T12:23:22,510           ############################
2023-08-31T12:23:22,510           Python recognizes 'moleculekit.interactions.sigmahole' as an importable package[^1],
2023-08-31T12:23:22,510           but it is absent from setuptools' `packages` configuration.

2023-08-31T12:23:22,510           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-31T12:23:22,510           package, please make sure that 'moleculekit.interactions.sigmahole' is explicitly added
2023-08-31T12:23:22,510           to the `packages` configuration field.

2023-08-31T12:23:22,511           Alternatively, you can also rely on setuptools' discovery methods
2023-08-31T12:23:22,511           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-31T12:23:22,511           instead of `find_packages(...)`/`find:`).

2023-08-31T12:23:22,511           You can read more about "package discovery" on setuptools documentation page:

2023-08-31T12:23:22,511           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-31T12:23:22,511           If you don't want 'moleculekit.interactions.sigmahole' to be distributed and are
2023-08-31T12:23:22,512           already explicitly excluding 'moleculekit.interactions.sigmahole' via
2023-08-31T12:23:22,512           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-31T12:23:22,512           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-31T12:23:22,512           combination with a more fine grained `package-data` configuration.

2023-08-31T12:23:22,512           You can read more about "package data files" on setuptools documentation page:

2023-08-31T12:23:22,512           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-31T12:23:22,513           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-31T12:23:22,513                 even if it does not contain any `.py` files.
2023-08-31T12:23:22,513                 On the other hand, currently there is no concept of package data
2023-08-31T12:23:22,513                 directory, all directories are treated like packages.
2023-08-31T12:23:22,513           ********************************************************************************

2023-08-31T12:23:22,513   !!
2023-08-31T12:23:22,513     check.warn(importable)
2023-08-31T12:23:22,513   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.occupancy_utils' is absent from the `packages` configuration.
2023-08-31T12:23:22,514   !!

2023-08-31T12:23:22,514           ********************************************************************************
2023-08-31T12:23:22,514           ############################
2023-08-31T12:23:22,514           # Package would be ignored #
2023-08-31T12:23:22,514           ############################
2023-08-31T12:23:22,514           Python recognizes 'moleculekit.occupancy_utils' as an importable package[^1],
2023-08-31T12:23:22,514           but it is absent from setuptools' `packages` configuration.

2023-08-31T12:23:22,515           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-31T12:23:22,515           package, please make sure that 'moleculekit.occupancy_utils' is explicitly added
2023-08-31T12:23:22,515           to the `packages` configuration field.

2023-08-31T12:23:22,515           Alternatively, you can also rely on setuptools' discovery methods
2023-08-31T12:23:22,515           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-31T12:23:22,515           instead of `find_packages(...)`/`find:`).

2023-08-31T12:23:22,516           You can read more about "package discovery" on setuptools documentation page:

2023-08-31T12:23:22,516           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-31T12:23:22,516           If you don't want 'moleculekit.occupancy_utils' to be distributed and are
2023-08-31T12:23:22,516           already explicitly excluding 'moleculekit.occupancy_utils' via
2023-08-31T12:23:22,516           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-31T12:23:22,516           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-31T12:23:22,516           combination with a more fine grained `package-data` configuration.

2023-08-31T12:23:22,517           You can read more about "package data files" on setuptools documentation page:

2023-08-31T12:23:22,517           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-31T12:23:22,517           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-31T12:23:22,517                 even if it does not contain any `.py` files.
2023-08-31T12:23:22,517                 On the other hand, currently there is no concept of package data
2023-08-31T12:23:22,517                 directory, all directories are treated like packages.
2023-08-31T12:23:22,518           ********************************************************************************

2023-08-31T12:23:22,518   !!
2023-08-31T12:23:22,518     check.warn(importable)
2023-08-31T12:23:22,518   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.share' is absent from the `packages` configuration.
2023-08-31T12:23:22,518   !!

2023-08-31T12:23:22,518           ********************************************************************************
2023-08-31T12:23:22,518           ############################
2023-08-31T12:23:22,518           # Package would be ignored #
2023-08-31T12:23:22,519           ############################
2023-08-31T12:23:22,519           Python recognizes 'moleculekit.share' as an importable package[^1],
2023-08-31T12:23:22,519           but it is absent from setuptools' `packages` configuration.

2023-08-31T12:23:22,519           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-31T12:23:22,519           package, please make sure that 'moleculekit.share' is explicitly added
2023-08-31T12:23:22,519           to the `packages` configuration field.

2023-08-31T12:23:22,519           Alternatively, you can also rely on setuptools' discovery methods
2023-08-31T12:23:22,520           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-31T12:23:22,520           instead of `find_packages(...)`/`find:`).

2023-08-31T12:23:22,520           You can read more about "package discovery" on setuptools documentation page:

2023-08-31T12:23:22,520           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-31T12:23:22,520           If you don't want 'moleculekit.share' to be distributed and are
2023-08-31T12:23:22,520           already explicitly excluding 'moleculekit.share' via
2023-08-31T12:23:22,521           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-31T12:23:22,521           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-31T12:23:22,521           combination with a more fine grained `package-data` configuration.

2023-08-31T12:23:22,521           You can read more about "package data files" on setuptools documentation page:

2023-08-31T12:23:22,521           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-31T12:23:22,522           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-31T12:23:22,522                 even if it does not contain any `.py` files.
2023-08-31T12:23:22,522                 On the other hand, currently there is no concept of package data
2023-08-31T12:23:22,522                 directory, all directories are treated like packages.
2023-08-31T12:23:22,522           ********************************************************************************

2023-08-31T12:23:22,522   !!
2023-08-31T12:23:22,523     check.warn(importable)
2023-08-31T12:23:22,523   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.share.atomselect' is absent from the `packages` configuration.
2023-08-31T12:23:22,523   !!

2023-08-31T12:23:22,523           ********************************************************************************
2023-08-31T12:23:22,523           ############################
2023-08-31T12:23:22,523           # Package would be ignored #
2023-08-31T12:23:22,523           ############################
2023-08-31T12:23:22,523           Python recognizes 'moleculekit.share.atomselect' as an importable package[^1],
2023-08-31T12:23:22,524           but it is absent from setuptools' `packages` configuration.

2023-08-31T12:23:22,524           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-31T12:23:22,524           package, please make sure that 'moleculekit.share.atomselect' is explicitly added
2023-08-31T12:23:22,524           to the `packages` configuration field.

2023-08-31T12:23:22,524           Alternatively, you can also rely on setuptools' discovery methods
2023-08-31T12:23:22,525           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-31T12:23:22,525           instead of `find_packages(...)`/`find:`).

2023-08-31T12:23:22,525           You can read more about "package discovery" on setuptools documentation page:

2023-08-31T12:23:22,525           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-31T12:23:22,525           If you don't want 'moleculekit.share.atomselect' to be distributed and are
2023-08-31T12:23:22,526           already explicitly excluding 'moleculekit.share.atomselect' via
2023-08-31T12:23:22,526           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-31T12:23:22,526           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-31T12:23:22,526           combination with a more fine grained `package-data` configuration.

2023-08-31T12:23:22,526           You can read more about "package data files" on setuptools documentation page:

2023-08-31T12:23:22,526           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-31T12:23:22,527           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-31T12:23:22,527                 even if it does not contain any `.py` files.
2023-08-31T12:23:22,527                 On the other hand, currently there is no concept of package data
2023-08-31T12:23:22,527                 directory, all directories are treated like packages.
2023-08-31T12:23:22,527           ********************************************************************************

2023-08-31T12:23:22,527   !!
2023-08-31T12:23:22,528     check.warn(importable)
2023-08-31T12:23:22,528   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.share.pdb2pqr.residues' is absent from the `packages` configuration.
2023-08-31T12:23:22,528   !!

2023-08-31T12:23:22,528           ********************************************************************************
2023-08-31T12:23:22,528           ############################
2023-08-31T12:23:22,528           # Package would be ignored #
2023-08-31T12:23:22,528           ############################
2023-08-31T12:23:22,529           Python recognizes 'moleculekit.share.pdb2pqr.residues' as an importable package[^1],
2023-08-31T12:23:22,529           but it is absent from setuptools' `packages` configuration.

2023-08-31T12:23:22,529           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-31T12:23:22,529           package, please make sure that 'moleculekit.share.pdb2pqr.residues' is explicitly added
2023-08-31T12:23:22,529           to the `packages` configuration field.

2023-08-31T12:23:22,529           Alternatively, you can also rely on setuptools' discovery methods
2023-08-31T12:23:22,530           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-31T12:23:22,530           instead of `find_packages(...)`/`find:`).

2023-08-31T12:23:22,530           You can read more about "package discovery" on setuptools documentation page:

2023-08-31T12:23:22,530           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-31T12:23:22,530           If you don't want 'moleculekit.share.pdb2pqr.residues' to be distributed and are
2023-08-31T12:23:22,530           already explicitly excluding 'moleculekit.share.pdb2pqr.residues' via
2023-08-31T12:23:22,531           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-31T12:23:22,531           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-31T12:23:22,531           combination with a more fine grained `package-data` configuration.

2023-08-31T12:23:22,531           You can read more about "package data files" on setuptools documentation page:

2023-08-31T12:23:22,531           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-31T12:23:22,532           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-31T12:23:22,532                 even if it does not contain any `.py` files.
2023-08-31T12:23:22,532                 On the other hand, currently there is no concept of package data
2023-08-31T12:23:22,532                 directory, all directories are treated like packages.
2023-08-31T12:23:22,532           ********************************************************************************

2023-08-31T12:23:22,533   !!
2023-08-31T12:23:22,533     check.warn(importable)
2023-08-31T12:23:22,533   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.tmalign' is absent from the `packages` configuration.
2023-08-31T12:23:22,533   !!

2023-08-31T12:23:22,533           ********************************************************************************
2023-08-31T12:23:22,533           ############################
2023-08-31T12:23:22,533           # Package would be ignored #
2023-08-31T12:23:22,533           ############################
2023-08-31T12:23:22,534           Python recognizes 'moleculekit.tmalign' as an importable package[^1],
2023-08-31T12:23:22,534           but it is absent from setuptools' `packages` configuration.

2023-08-31T12:23:22,534           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-31T12:23:22,534           package, please make sure that 'moleculekit.tmalign' is explicitly added
2023-08-31T12:23:22,534           to the `packages` configuration field.

2023-08-31T12:23:22,535           Alternatively, you can also rely on setuptools' discovery methods
2023-08-31T12:23:22,535           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-31T12:23:22,535           instead of `find_packages(...)`/`find:`).

2023-08-31T12:23:22,535           You can read more about "package discovery" on setuptools documentation page:

2023-08-31T12:23:22,536           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-31T12:23:22,536           If you don't want 'moleculekit.tmalign' to be distributed and are
2023-08-31T12:23:22,536           already explicitly excluding 'moleculekit.tmalign' via
2023-08-31T12:23:22,536           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-31T12:23:22,536           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-31T12:23:22,537           combination with a more fine grained `package-data` configuration.

2023-08-31T12:23:22,537           You can read more about "package data files" on setuptools documentation page:

2023-08-31T12:23:22,537           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-31T12:23:22,538           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-31T12:23:22,538                 even if it does not contain any `.py` files.
2023-08-31T12:23:22,538                 On the other hand, currently there is no concept of package data
2023-08-31T12:23:22,538                 directory, all directories are treated like packages.
2023-08-31T12:23:22,538           ********************************************************************************

2023-08-31T12:23:22,539   !!
2023-08-31T12:23:22,539     check.warn(importable)
2023-08-31T12:23:22,539   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.tmalign.include' is absent from the `packages` configuration.
2023-08-31T12:23:22,539   !!

2023-08-31T12:23:22,539           ********************************************************************************
2023-08-31T12:23:22,540           ############################
2023-08-31T12:23:22,540           # Package would be ignored #
2023-08-31T12:23:22,540           ############################
2023-08-31T12:23:22,540           Python recognizes 'moleculekit.tmalign.include' as an importable package[^1],
2023-08-31T12:23:22,540           but it is absent from setuptools' `packages` configuration.

2023-08-31T12:23:22,540           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-31T12:23:22,540           package, please make sure that 'moleculekit.tmalign.include' is explicitly added
2023-08-31T12:23:22,540           to the `packages` configuration field.

2023-08-31T12:23:22,541           Alternatively, you can also rely on setuptools' discovery methods
2023-08-31T12:23:22,541           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-31T12:23:22,541           instead of `find_packages(...)`/`find:`).

2023-08-31T12:23:22,541           You can read more about "package discovery" on setuptools documentation page:

2023-08-31T12:23:22,542           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-31T12:23:22,542           If you don't want 'moleculekit.tmalign.include' to be distributed and are
2023-08-31T12:23:22,542           already explicitly excluding 'moleculekit.tmalign.include' via
2023-08-31T12:23:22,542           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-31T12:23:22,542           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-31T12:23:22,543           combination with a more fine grained `package-data` configuration.

2023-08-31T12:23:22,543           You can read more about "package data files" on setuptools documentation page:

2023-08-31T12:23:22,543           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-31T12:23:22,543           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-31T12:23:22,544                 even if it does not contain any `.py` files.
2023-08-31T12:23:22,544                 On the other hand, currently there is no concept of package data
2023-08-31T12:23:22,544                 directory, all directories are treated like packages.
2023-08-31T12:23:22,544           ********************************************************************************

2023-08-31T12:23:22,544   !!
2023-08-31T12:23:22,545     check.warn(importable)
2023-08-31T12:23:22,545   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.tmalign.src' is absent from the `packages` configuration.
2023-08-31T12:23:22,545   !!

2023-08-31T12:23:22,545           ********************************************************************************
2023-08-31T12:23:22,545           ############################
2023-08-31T12:23:22,546           # Package would be ignored #
2023-08-31T12:23:22,546           ############################
2023-08-31T12:23:22,546           Python recognizes 'moleculekit.tmalign.src' as an importable package[^1],
2023-08-31T12:23:22,546           but it is absent from setuptools' `packages` configuration.

2023-08-31T12:23:22,546           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-31T12:23:22,546           package, please make sure that 'moleculekit.tmalign.src' is explicitly added
2023-08-31T12:23:22,547           to the `packages` configuration field.

2023-08-31T12:23:22,547           Alternatively, you can also rely on setuptools' discovery methods
2023-08-31T12:23:22,547           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-31T12:23:22,547           instead of `find_packages(...)`/`find:`).

2023-08-31T12:23:22,547           You can read more about "package discovery" on setuptools documentation page:

2023-08-31T12:23:22,548           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-31T12:23:22,548           If you don't want 'moleculekit.tmalign.src' to be distributed and are
2023-08-31T12:23:22,548           already explicitly excluding 'moleculekit.tmalign.src' via
2023-08-31T12:23:22,548           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-31T12:23:22,548           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-31T12:23:22,548           combination with a more fine grained `package-data` configuration.

2023-08-31T12:23:22,549           You can read more about "package data files" on setuptools documentation page:

2023-08-31T12:23:22,549           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-31T12:23:22,549           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-31T12:23:22,549                 even if it does not contain any `.py` files.
2023-08-31T12:23:22,550                 On the other hand, currently there is no concept of package data
2023-08-31T12:23:22,550                 directory, all directories are treated like packages.
2023-08-31T12:23:22,550           ********************************************************************************

2023-08-31T12:23:22,550   !!
2023-08-31T12:23:22,550     check.warn(importable)
2023-08-31T12:23:22,550   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.wrapping' is absent from the `packages` configuration.
2023-08-31T12:23:22,550   !!

2023-08-31T12:23:22,551           ********************************************************************************
2023-08-31T12:23:22,551           ############################
2023-08-31T12:23:22,551           # Package would be ignored #
2023-08-31T12:23:22,551           ############################
2023-08-31T12:23:22,551           Python recognizes 'moleculekit.wrapping' as an importable package[^1],
2023-08-31T12:23:22,551           but it is absent from setuptools' `packages` configuration.

2023-08-31T12:23:22,552           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-31T12:23:22,552           package, please make sure that 'moleculekit.wrapping' is explicitly added
2023-08-31T12:23:22,552           to the `packages` configuration field.

2023-08-31T12:23:22,552           Alternatively, you can also rely on setuptools' discovery methods
2023-08-31T12:23:22,552           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-31T12:23:22,552           instead of `find_packages(...)`/`find:`).

2023-08-31T12:23:22,553           You can read more about "package discovery" on setuptools documentation page:

2023-08-31T12:23:22,553           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-31T12:23:22,553           If you don't want 'moleculekit.wrapping' to be distributed and are
2023-08-31T12:23:22,553           already explicitly excluding 'moleculekit.wrapping' via
2023-08-31T12:23:22,553           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-31T12:23:22,553           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-31T12:23:22,554           combination with a more fine grained `package-data` configuration.

2023-08-31T12:23:22,554           You can read more about "package data files" on setuptools documentation page:

2023-08-31T12:23:22,554           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-31T12:23:22,554           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-31T12:23:22,555                 even if it does not contain any `.py` files.
2023-08-31T12:23:22,555                 On the other hand, currently there is no concept of package data
2023-08-31T12:23:22,555                 directory, all directories are treated like packages.
2023-08-31T12:23:22,555           ********************************************************************************

2023-08-31T12:23:22,555   !!
2023-08-31T12:23:22,555     check.warn(importable)
2023-08-31T12:23:22,555   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.xtc_utils' is absent from the `packages` configuration.
2023-08-31T12:23:22,556   !!

2023-08-31T12:23:22,556           ********************************************************************************
2023-08-31T12:23:22,556           ############################
2023-08-31T12:23:22,556           # Package would be ignored #
2023-08-31T12:23:22,556           ############################
2023-08-31T12:23:22,556           Python recognizes 'moleculekit.xtc_utils' as an importable package[^1],
2023-08-31T12:23:22,556           but it is absent from setuptools' `packages` configuration.

2023-08-31T12:23:22,557           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-31T12:23:22,557           package, please make sure that 'moleculekit.xtc_utils' is explicitly added
2023-08-31T12:23:22,557           to the `packages` configuration field.

2023-08-31T12:23:22,557           Alternatively, you can also rely on setuptools' discovery methods
2023-08-31T12:23:22,557           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-31T12:23:22,557           instead of `find_packages(...)`/`find:`).

2023-08-31T12:23:22,558           You can read more about "package discovery" on setuptools documentation page:

2023-08-31T12:23:22,558           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-31T12:23:22,558           If you don't want 'moleculekit.xtc_utils' to be distributed and are
2023-08-31T12:23:22,558           already explicitly excluding 'moleculekit.xtc_utils' via
2023-08-31T12:23:22,558           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-31T12:23:22,558           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-31T12:23:22,558           combination with a more fine grained `package-data` configuration.

2023-08-31T12:23:22,559           You can read more about "package data files" on setuptools documentation page:

2023-08-31T12:23:22,559           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-31T12:23:22,559           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-31T12:23:22,559                 even if it does not contain any `.py` files.
2023-08-31T12:23:22,560                 On the other hand, currently there is no concept of package data
2023-08-31T12:23:22,560                 directory, all directories are treated like packages.
2023-08-31T12:23:22,560           ********************************************************************************

2023-08-31T12:23:22,560   !!
2023-08-31T12:23:22,560     check.warn(importable)
2023-08-31T12:23:22,560   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.xtc_utils.include' is absent from the `packages` configuration.
2023-08-31T12:23:22,560   !!

2023-08-31T12:23:22,561           ********************************************************************************
2023-08-31T12:23:22,561           ############################
2023-08-31T12:23:22,561           # Package would be ignored #
2023-08-31T12:23:22,561           ############################
2023-08-31T12:23:22,561           Python recognizes 'moleculekit.xtc_utils.include' as an importable package[^1],
2023-08-31T12:23:22,561           but it is absent from setuptools' `packages` configuration.

2023-08-31T12:23:22,561           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-31T12:23:22,561           package, please make sure that 'moleculekit.xtc_utils.include' is explicitly added
2023-08-31T12:23:22,562           to the `packages` configuration field.

2023-08-31T12:23:22,562           Alternatively, you can also rely on setuptools' discovery methods
2023-08-31T12:23:22,562           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-31T12:23:22,562           instead of `find_packages(...)`/`find:`).

2023-08-31T12:23:22,562           You can read more about "package discovery" on setuptools documentation page:

2023-08-31T12:23:22,563           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-31T12:23:22,563           If you don't want 'moleculekit.xtc_utils.include' to be distributed and are
2023-08-31T12:23:22,563           already explicitly excluding 'moleculekit.xtc_utils.include' via
2023-08-31T12:23:22,563           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-31T12:23:22,563           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-31T12:23:22,564           combination with a more fine grained `package-data` configuration.

2023-08-31T12:23:22,564           You can read more about "package data files" on setuptools documentation page:

2023-08-31T12:23:22,564           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-31T12:23:22,565           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-31T12:23:22,565                 even if it does not contain any `.py` files.
2023-08-31T12:23:22,565                 On the other hand, currently there is no concept of package data
2023-08-31T12:23:22,565                 directory, all directories are treated like packages.
2023-08-31T12:23:22,565           ********************************************************************************

2023-08-31T12:23:22,566   !!
2023-08-31T12:23:22,566     check.warn(importable)
2023-08-31T12:23:22,566   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.xtc_utils.src' is absent from the `packages` configuration.
2023-08-31T12:23:22,566   !!

2023-08-31T12:23:22,566           ********************************************************************************
2023-08-31T12:23:22,566           ############################
2023-08-31T12:23:22,567           # Package would be ignored #
2023-08-31T12:23:22,567           ############################
2023-08-31T12:23:22,567           Python recognizes 'moleculekit.xtc_utils.src' as an importable package[^1],
2023-08-31T12:23:22,567           but it is absent from setuptools' `packages` configuration.

2023-08-31T12:23:22,567           This leads to an ambiguous overall configuration. If you want to distribute this
2023-08-31T12:23:22,567           package, please make sure that 'moleculekit.xtc_utils.src' is explicitly added
2023-08-31T12:23:22,568           to the `packages` configuration field.

2023-08-31T12:23:22,568           Alternatively, you can also rely on setuptools' discovery methods
2023-08-31T12:23:22,568           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-08-31T12:23:22,568           instead of `find_packages(...)`/`find:`).

2023-08-31T12:23:22,568           You can read more about "package discovery" on setuptools documentation page:

2023-08-31T12:23:22,569           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-08-31T12:23:22,569           If you don't want 'moleculekit.xtc_utils.src' to be distributed and are
2023-08-31T12:23:22,569           already explicitly excluding 'moleculekit.xtc_utils.src' via
2023-08-31T12:23:22,569           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-08-31T12:23:22,569           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-08-31T12:23:22,569           combination with a more fine grained `package-data` configuration.

2023-08-31T12:23:22,570           You can read more about "package data files" on setuptools documentation page:

2023-08-31T12:23:22,570           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-08-31T12:23:22,570           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-08-31T12:23:22,571                 even if it does not contain any `.py` files.
2023-08-31T12:23:22,571                 On the other hand, currently there is no concept of package data
2023-08-31T12:23:22,571                 directory, all directories are treated like packages.
2023-08-31T12:23:22,571           ********************************************************************************

2023-08-31T12:23:22,571   !!
2023-08-31T12:23:22,571     check.warn(importable)
2023-08-31T12:23:22,572   copying moleculekit/logging.ini -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:22,572   copying moleculekit/vmd_wrapper -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:22,572   creating build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-08-31T12:23:22,572   copying moleculekit/atomselect_utils/atomselect_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-08-31T12:23:22,572   copying moleculekit/atomselect_utils/atomselect_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-08-31T12:23:22,572   creating build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-08-31T12:23:22,572   copying moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-08-31T12:23:22,579   copying moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-08-31T12:23:22,582   creating build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-08-31T12:23:22,583   copying moleculekit/distance_utils/distance_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-08-31T12:23:22,609   copying moleculekit/distance_utils/distance_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-08-31T12:23:22,611   creating build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-08-31T12:23:22,612   copying moleculekit/occupancy_utils/occupancy_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-08-31T12:23:22,630   copying moleculekit/occupancy_utils/occupancy_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-08-31T12:23:22,632   creating build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-08-31T12:23:22,633   copying moleculekit/share/ALA.cif -> build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-08-31T12:23:22,635   copying moleculekit/share/backbone.cif -> build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-08-31T12:23:22,637   copying moleculekit/share/opm_sequences.json -> build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-08-31T12:23:22,838   creating build/lib.linux-armv7l-cpython-39/moleculekit/share/atomselect
2023-08-31T12:23:22,839   copying moleculekit/share/atomselect/atomselect.json -> build/lib.linux-armv7l-cpython-39/moleculekit/share/atomselect
2023-08-31T12:23:22,841   creating build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr
2023-08-31T12:23:22,842   creating build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,843   copying moleculekit/share/pdb2pqr/residues/.gitkeep -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,845   copying moleculekit/share/pdb2pqr/residues/004.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,846   copying moleculekit/share/pdb2pqr/residues/004.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,848   copying moleculekit/share/pdb2pqr/residues/03Y.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,850   copying moleculekit/share/pdb2pqr/residues/03Y.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,852   copying moleculekit/share/pdb2pqr/residues/0A1.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,854   copying moleculekit/share/pdb2pqr/residues/0A1.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,856   copying moleculekit/share/pdb2pqr/residues/0AF.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,858   copying moleculekit/share/pdb2pqr/residues/0AF.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,860   copying moleculekit/share/pdb2pqr/residues/0BN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,862   copying moleculekit/share/pdb2pqr/residues/0BN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,865   copying moleculekit/share/pdb2pqr/residues/1MH.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,867   copying moleculekit/share/pdb2pqr/residues/1MH.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,869   copying moleculekit/share/pdb2pqr/residues/2AS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,871   copying moleculekit/share/pdb2pqr/residues/2AS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,873   copying moleculekit/share/pdb2pqr/residues/2GX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,875   copying moleculekit/share/pdb2pqr/residues/2GX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,878   copying moleculekit/share/pdb2pqr/residues/2ML.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,880   copying moleculekit/share/pdb2pqr/residues/2ML.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,883   copying moleculekit/share/pdb2pqr/residues/2MR.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,886   copying moleculekit/share/pdb2pqr/residues/2MR.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,889   copying moleculekit/share/pdb2pqr/residues/4IN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,891   copying moleculekit/share/pdb2pqr/residues/4IN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,894   copying moleculekit/share/pdb2pqr/residues/4PH.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,898   copying moleculekit/share/pdb2pqr/residues/4PH.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,900   copying moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,903   copying moleculekit/share/pdb2pqr/residues/4PQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,905   copying moleculekit/share/pdb2pqr/residues/5JP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,908   copying moleculekit/share/pdb2pqr/residues/5JP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,911   copying moleculekit/share/pdb2pqr/residues/AA4.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,914   copying moleculekit/share/pdb2pqr/residues/AA4.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,916   copying moleculekit/share/pdb2pqr/residues/ABA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,918   copying moleculekit/share/pdb2pqr/residues/ABA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,921   copying moleculekit/share/pdb2pqr/residues/AHP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,923   copying moleculekit/share/pdb2pqr/residues/AHP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,926   copying moleculekit/share/pdb2pqr/residues/ALC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,929   copying moleculekit/share/pdb2pqr/residues/ALC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,931   copying moleculekit/share/pdb2pqr/residues/ALN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,934   copying moleculekit/share/pdb2pqr/residues/ALN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,937   copying moleculekit/share/pdb2pqr/residues/ALY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,939   copying moleculekit/share/pdb2pqr/residues/ALY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,942   copying moleculekit/share/pdb2pqr/residues/APD.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,944   copying moleculekit/share/pdb2pqr/residues/APD.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,947   copying moleculekit/share/pdb2pqr/residues/BB8.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,949   copying moleculekit/share/pdb2pqr/residues/BB8.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,952   copying moleculekit/share/pdb2pqr/residues/BCS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,954   copying moleculekit/share/pdb2pqr/residues/BCS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,957   copying moleculekit/share/pdb2pqr/residues/BTK.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,959   copying moleculekit/share/pdb2pqr/residues/BTK.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,962   copying moleculekit/share/pdb2pqr/residues/CCS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,964   copying moleculekit/share/pdb2pqr/residues/CCS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,967   copying moleculekit/share/pdb2pqr/residues/CGU.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,969   copying moleculekit/share/pdb2pqr/residues/CGU.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,972   copying moleculekit/share/pdb2pqr/residues/CSA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,974   copying moleculekit/share/pdb2pqr/residues/CSA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,977   copying moleculekit/share/pdb2pqr/residues/CSO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,979   copying moleculekit/share/pdb2pqr/residues/CSO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,980   copying moleculekit/share/pdb2pqr/residues/CSP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,982   copying moleculekit/share/pdb2pqr/residues/CSP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,984   copying moleculekit/share/pdb2pqr/residues/CSS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,986   copying moleculekit/share/pdb2pqr/residues/CSS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,988   copying moleculekit/share/pdb2pqr/residues/D4P.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,990   copying moleculekit/share/pdb2pqr/residues/D4P.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,993   copying moleculekit/share/pdb2pqr/residues/DA2.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,995   copying moleculekit/share/pdb2pqr/residues/DA2.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,997   copying moleculekit/share/pdb2pqr/residues/DAB.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:22,999   copying moleculekit/share/pdb2pqr/residues/DAB.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,001   copying moleculekit/share/pdb2pqr/residues/DAH.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,004   copying moleculekit/share/pdb2pqr/residues/DAH.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,006   copying moleculekit/share/pdb2pqr/residues/DPP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,008   copying moleculekit/share/pdb2pqr/residues/DPP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,010   copying moleculekit/share/pdb2pqr/residues/ESC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,012   copying moleculekit/share/pdb2pqr/residues/ESC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,014   copying moleculekit/share/pdb2pqr/residues/FGL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,016   copying moleculekit/share/pdb2pqr/residues/FGL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,018   copying moleculekit/share/pdb2pqr/residues/GHG.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,020   copying moleculekit/share/pdb2pqr/residues/GHG.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,022   copying moleculekit/share/pdb2pqr/residues/GME.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,024   copying moleculekit/share/pdb2pqr/residues/GME.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,026   copying moleculekit/share/pdb2pqr/residues/GNC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,028   copying moleculekit/share/pdb2pqr/residues/GNC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,030   copying moleculekit/share/pdb2pqr/residues/HHK.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,032   copying moleculekit/share/pdb2pqr/residues/HHK.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,035   copying moleculekit/share/pdb2pqr/residues/HLU.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,037   copying moleculekit/share/pdb2pqr/residues/HLU.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,039   copying moleculekit/share/pdb2pqr/residues/HLX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,041   copying moleculekit/share/pdb2pqr/residues/HLX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,043   copying moleculekit/share/pdb2pqr/residues/HOX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,045   copying moleculekit/share/pdb2pqr/residues/HOX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,048   copying moleculekit/share/pdb2pqr/residues/HPE.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,050   copying moleculekit/share/pdb2pqr/residues/HPE.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,052   copying moleculekit/share/pdb2pqr/residues/HQA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,054   copying moleculekit/share/pdb2pqr/residues/HQA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,056   copying moleculekit/share/pdb2pqr/residues/HTR.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,058   copying moleculekit/share/pdb2pqr/residues/HTR.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,060   copying moleculekit/share/pdb2pqr/residues/HYP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,062   copying moleculekit/share/pdb2pqr/residues/HYP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,064   copying moleculekit/share/pdb2pqr/residues/I2M.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,066   copying moleculekit/share/pdb2pqr/residues/I2M.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,068   copying moleculekit/share/pdb2pqr/residues/IGL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,070   copying moleculekit/share/pdb2pqr/residues/IGL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,072   copying moleculekit/share/pdb2pqr/residues/IIL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,074   copying moleculekit/share/pdb2pqr/residues/IIL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,076   copying moleculekit/share/pdb2pqr/residues/IML.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,078   copying moleculekit/share/pdb2pqr/residues/IML.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,081   copying moleculekit/share/pdb2pqr/residues/KYN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,083   copying moleculekit/share/pdb2pqr/residues/KYN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,085   copying moleculekit/share/pdb2pqr/residues/LME.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,087   copying moleculekit/share/pdb2pqr/residues/LME.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,089   copying moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,091   copying moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,093   copying moleculekit/share/pdb2pqr/residues/LYZ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,095   copying moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,097   copying moleculekit/share/pdb2pqr/residues/M3L.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,100   copying moleculekit/share/pdb2pqr/residues/M3L.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,102   copying moleculekit/share/pdb2pqr/residues/ME0.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,104   copying moleculekit/share/pdb2pqr/residues/ME0.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,106   copying moleculekit/share/pdb2pqr/residues/MEA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,108   copying moleculekit/share/pdb2pqr/residues/MEA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,110   copying moleculekit/share/pdb2pqr/residues/MEN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,112   copying moleculekit/share/pdb2pqr/residues/MEN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,114   copying moleculekit/share/pdb2pqr/residues/MEQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,116   copying moleculekit/share/pdb2pqr/residues/MEQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,118   copying moleculekit/share/pdb2pqr/residues/MLE.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,120   copying moleculekit/share/pdb2pqr/residues/MLE.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,122   copying moleculekit/share/pdb2pqr/residues/MLY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,124   copying moleculekit/share/pdb2pqr/residues/MLY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,126   copying moleculekit/share/pdb2pqr/residues/MLZ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,128   copying moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,131   copying moleculekit/share/pdb2pqr/residues/MME.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,132   copying moleculekit/share/pdb2pqr/residues/MME.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,135   copying moleculekit/share/pdb2pqr/residues/MMO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,137   copying moleculekit/share/pdb2pqr/residues/MMO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,139   copying moleculekit/share/pdb2pqr/residues/MVA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,141   copying moleculekit/share/pdb2pqr/residues/MVA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,143   copying moleculekit/share/pdb2pqr/residues/NAL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,145   copying moleculekit/share/pdb2pqr/residues/NAL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,147   copying moleculekit/share/pdb2pqr/residues/NCY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,149   copying moleculekit/share/pdb2pqr/residues/NCY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,151   copying moleculekit/share/pdb2pqr/residues/NLE.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,153   copying moleculekit/share/pdb2pqr/residues/NLE.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,155   copying moleculekit/share/pdb2pqr/residues/NVA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,156   copying moleculekit/share/pdb2pqr/residues/NVA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,158   copying moleculekit/share/pdb2pqr/residues/NZC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,160   copying moleculekit/share/pdb2pqr/residues/NZC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,162   copying moleculekit/share/pdb2pqr/residues/OCY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,164   copying moleculekit/share/pdb2pqr/residues/OCY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,166   copying moleculekit/share/pdb2pqr/residues/OMX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,168   copying moleculekit/share/pdb2pqr/residues/OMX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,170   copying moleculekit/share/pdb2pqr/residues/ONL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,172   copying moleculekit/share/pdb2pqr/residues/ONL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,174   copying moleculekit/share/pdb2pqr/residues/ORM.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,175   copying moleculekit/share/pdb2pqr/residues/ORM.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,177   copying moleculekit/share/pdb2pqr/residues/P1L.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,180   copying moleculekit/share/pdb2pqr/residues/P1L.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,182   copying moleculekit/share/pdb2pqr/residues/PCA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,184   copying moleculekit/share/pdb2pqr/residues/PCA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,186   copying moleculekit/share/pdb2pqr/residues/PRK.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,187   copying moleculekit/share/pdb2pqr/residues/PRK.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,190   copying moleculekit/share/pdb2pqr/residues/PTR.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,191   copying moleculekit/share/pdb2pqr/residues/PTR.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,193   copying moleculekit/share/pdb2pqr/residues/SEP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,195   copying moleculekit/share/pdb2pqr/residues/SEP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,197   copying moleculekit/share/pdb2pqr/residues/TPO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,199   copying moleculekit/share/pdb2pqr/residues/TPO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,201   copying moleculekit/share/pdb2pqr/residues/TRO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,203   copying moleculekit/share/pdb2pqr/residues/TRO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,205   copying moleculekit/share/pdb2pqr/residues/TY2.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,206   copying moleculekit/share/pdb2pqr/residues/TY2.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,208   copying moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,210   copying moleculekit/share/pdb2pqr/residues/TYQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,212   copying moleculekit/share/pdb2pqr/residues/YCM.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,214   copying moleculekit/share/pdb2pqr/residues/YCM.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,216   copying moleculekit/share/pdb2pqr/residues/YNM.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,217   copying moleculekit/share/pdb2pqr/residues/YNM.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-08-31T12:23:23,220   creating build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-08-31T12:23:23,220   copying moleculekit/tmalign/tmalign_util.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-08-31T12:23:23,241   copying moleculekit/tmalign/tmalign_util.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-08-31T12:23:23,243   copying moleculekit/tmalign/tmalignlib.pxd -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-08-31T12:23:23,245   creating build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/include
2023-08-31T12:23:23,246   copying moleculekit/tmalign/include/TMAlign.h -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/include
2023-08-31T12:23:23,249   creating build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/src
2023-08-31T12:23:23,250   copying moleculekit/tmalign/src/TMAlign.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/src
2023-08-31T12:23:23,257   creating build/lib.linux-armv7l-cpython-39/moleculekit/wrapping
2023-08-31T12:23:23,258   copying moleculekit/wrapping/wrapping.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/wrapping
2023-08-31T12:23:23,279   copying moleculekit/wrapping/wrapping.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/wrapping
2023-08-31T12:23:23,281   creating build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-08-31T12:23:23,282   copying moleculekit/xtc_utils/xtc.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-08-31T12:23:23,301   copying moleculekit/xtc_utils/xtc.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-08-31T12:23:23,303   copying moleculekit/xtc_utils/xtclib.pxd -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-08-31T12:23:23,305   creating build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-08-31T12:23:23,307   copying moleculekit/xtc_utils/include/xdrfile.h -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-08-31T12:23:23,310   copying moleculekit/xtc_utils/include/xdrfile_xtc.h -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-08-31T12:23:23,312   copying moleculekit/xtc_utils/include/xtc.h -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-08-31T12:23:23,314   creating build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-08-31T12:23:23,315   copying moleculekit/xtc_utils/src/xdrfile.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-08-31T12:23:23,319   copying moleculekit/xtc_utils/src/xdrfile_xtc.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-08-31T12:23:23,321   copying moleculekit/xtc_utils/src/xtc.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-08-31T12:23:23,323   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-08-31T12:23:23,325   copying moleculekit/interactions/cationpi/cationpi.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-08-31T12:23:23,351   copying moleculekit/interactions/cationpi/cationpi.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-08-31T12:23:23,353   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-08-31T12:23:23,354   copying moleculekit/interactions/hbonds/hbonds.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-08-31T12:23:23,372   copying moleculekit/interactions/hbonds/hbonds.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-08-31T12:23:23,374   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-08-31T12:23:23,375   copying moleculekit/interactions/pipi/pipi.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-08-31T12:23:23,396   copying moleculekit/interactions/pipi/pipi.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-08-31T12:23:23,398   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-08-31T12:23:23,398   copying moleculekit/interactions/sigmahole/sigmahole.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-08-31T12:23:23,422   copying moleculekit/interactions/sigmahole/sigmahole.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-08-31T12:23:23,434   UPDATING build/lib.linux-armv7l-cpython-39/moleculekit/_version.py
2023-08-31T12:23:23,434   set build/lib.linux-armv7l-cpython-39/moleculekit/_version.py to '1.7.8'
2023-08-31T12:23:23,434   running build_ext
2023-08-31T12:23:23,445   building 'moleculekit.interactions.hbonds' extension
2023-08-31T12:23:23,446   creating build/temp.linux-armv7l-cpython-39
2023-08-31T12:23:23,447   creating build/temp.linux-armv7l-cpython-39/moleculekit
2023-08-31T12:23:23,447   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions
2023-08-31T12:23:23,448   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-08-31T12:23:23,449   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/hbonds/hbonds.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.o -O3
2023-08-31T12:23:23,726   In file included from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-08-31T12:23:23,726                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-08-31T12:23:23,727                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-08-31T12:23:23,727                    from moleculekit/interactions/hbonds/hbonds.cpp:1192:
2023-08-31T12:23:23,727   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-08-31T12:23:23,727      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-08-31T12:23:23,727         |  ^~~~~~~
2023-08-31T12:23:49,826   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds.cpython-39-arm-linux-gnueabihf.so
2023-08-31T12:23:50,150   building 'moleculekit.interactions.pipi' extension
2023-08-31T12:23:50,151   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-08-31T12:23:50,152   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/pipi/pipi.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.o -O3
2023-08-31T12:23:50,386   In file included from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-08-31T12:23:50,386                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-08-31T12:23:50,386                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-08-31T12:23:50,386                    from moleculekit/interactions/pipi/pipi.cpp:1192:
2023-08-31T12:23:50,386   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-08-31T12:23:50,387      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-08-31T12:23:50,387         |  ^~~~~~~
2023-08-31T12:24:18,507   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi.cpython-39-arm-linux-gnueabihf.so
2023-08-31T12:24:18,825   building 'moleculekit.interactions.cationpi' extension
2023-08-31T12:24:18,826   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-08-31T12:24:18,827   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/cationpi/cationpi.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.o -O3
2023-08-31T12:24:19,068   In file included from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-08-31T12:24:19,069                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-08-31T12:24:19,069                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-08-31T12:24:19,069                    from moleculekit/interactions/cationpi/cationpi.cpp:1192:
2023-08-31T12:24:19,069   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-08-31T12:24:19,069      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-08-31T12:24:19,069         |  ^~~~~~~
2023-08-31T12:24:46,905   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi.cpython-39-arm-linux-gnueabihf.so
2023-08-31T12:24:47,223   building 'moleculekit.interactions.sigmahole' extension
2023-08-31T12:24:47,224   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-08-31T12:24:47,225   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/sigmahole/sigmahole.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.o -O3
2023-08-31T12:24:47,458   In file included from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-08-31T12:24:47,459                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-08-31T12:24:47,459                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-08-31T12:24:47,459                    from moleculekit/interactions/sigmahole/sigmahole.cpp:1192:
2023-08-31T12:24:47,459   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-08-31T12:24:47,459      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-08-31T12:24:47,459         |  ^~~~~~~
2023-08-31T12:25:14,731   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole.cpython-39-arm-linux-gnueabihf.so
2023-08-31T12:25:15,050   building 'moleculekit.wrapping' extension
2023-08-31T12:25:15,051   creating build/temp.linux-armv7l-cpython-39/moleculekit/wrapping
2023-08-31T12:25:15,052   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/wrapping/wrapping.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.o -O3
2023-08-31T12:25:15,286   In file included from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-08-31T12:25:15,286                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-08-31T12:25:15,286                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-08-31T12:25:15,286                    from moleculekit/wrapping/wrapping.cpp:1192:
2023-08-31T12:25:15,287   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-08-31T12:25:15,287      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-08-31T12:25:15,287         |  ^~~~~~~
2023-08-31T12:25:39,024   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/wrapping.cpython-39-arm-linux-gnueabihf.so
2023-08-31T12:25:39,237   building 'moleculekit.bondguesser_utils' extension
2023-08-31T12:25:39,238   creating build/temp.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-08-31T12:25:39,239   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/bondguesser_utils/bondguesser_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.o -O3
2023-08-31T12:25:39,478   In file included from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-08-31T12:25:39,478                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-08-31T12:25:39,478                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-08-31T12:25:39,478                    from moleculekit/bondguesser_utils/bondguesser_utils.cpp:1192:
2023-08-31T12:25:39,479   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-08-31T12:25:39,479      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-08-31T12:25:39,479         |  ^~~~~~~
2023-08-31T12:25:41,061   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_make_grid_neighborlist_nonperiodic(PyObject*, __Pyx_memviewslice, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t)’:
2023-08-31T12:25:41,062   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19831:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-08-31T12:25:41,062   19831 |   for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) {
2023-08-31T12:25:41,062         |                       ~~~~~~~~~~^~~~~~~~~~~
2023-08-31T12:25:41,062   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19843:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-08-31T12:25:41,062   19843 |     for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) {
2023-08-31T12:25:41,062         |                         ~~~~~~~~~~^~~~~~~~~~~
2023-08-31T12:25:41,062   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19855:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-08-31T12:25:41,063   19855 |       for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) {
2023-08-31T12:25:41,063         |                           ~~~~~~~~~~^~~~~~~~~~~
2023-08-31T12:25:41,063   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19894:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,063   19894 |         __pyx_t_12 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-08-31T12:25:41,063         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,063   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19933:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,064   19933 |         __pyx_t_12 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-08-31T12:25:41,064         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,064   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19972:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,064   19972 |         __pyx_t_12 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-08-31T12:25:41,064         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,064   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20011:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,064   20011 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-08-31T12:25:41,065         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,065   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20017:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,065   20017 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-08-31T12:25:41,065         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,065   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20058:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,065   20058 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-08-31T12:25:41,066         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,066   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20064:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,066   20064 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-08-31T12:25:41,066         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,066   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20105:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,066   20105 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-08-31T12:25:41,066         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,066   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20111:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,067   20111 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-08-31T12:25:41,067         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,067   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20152:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,067   20152 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-08-31T12:25:41,067         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,067   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20205:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,067   20205 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-08-31T12:25:41,068         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,068   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20252:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,068   20252 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-08-31T12:25:41,068         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,068   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20293:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,068   20293 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-08-31T12:25:41,068         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,069   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20299:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,069   20299 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-08-31T12:25:41,069         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,069   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20305:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,069   20305 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-08-31T12:25:41,069         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,069   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20352:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,070   20352 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-08-31T12:25:41,070         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,070   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20358:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,070   20358 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-08-31T12:25:41,070         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,070   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20399:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,070   20399 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-08-31T12:25:41,070         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,071   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20411:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,071   20411 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-08-31T12:25:41,071         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,071   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20464:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-08-31T12:25:41,071   20464 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-08-31T12:25:41,071         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,090   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_2grid_bonds(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, float, int, __Pyx_memviewslice, __Pyx_memviewslice)’:
2023-08-31T12:25:41,090   moleculekit/bondguesser_utils/bondguesser_utils.cpp:21089:37: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-31T12:25:41,090   21089 |       __pyx_t_6 = (__pyx_v_boxneigh == __pyx_v_n_boxes);
2023-08-31T12:25:41,091         |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
2023-08-31T12:25:41,091   moleculekit/bondguesser_utils/bondguesser_utils.cpp:21126:37: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-31T12:25:41,091   21126 |       __pyx_t_6 = (__pyx_v_boxneigh == __pyx_v_boxidx);
2023-08-31T12:25:41,091         |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2023-08-31T12:26:04,083   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils.cpython-39-arm-linux-gnueabihf.so
2023-08-31T12:26:04,383   building 'moleculekit.atomselect_utils' extension
2023-08-31T12:26:04,384   creating build/temp.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-08-31T12:26:04,385   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/atomselect_utils/atomselect_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.o -O3
2023-08-31T12:26:04,621   In file included from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-08-31T12:26:04,621                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-08-31T12:26:04,621                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-08-31T12:26:04,621                    from moleculekit/atomselect_utils/atomselect_utils.cpp:1209:
2023-08-31T12:26:04,621   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-08-31T12:26:04,621      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-08-31T12:26:04,621         |  ^~~~~~~
2023-08-31T12:26:06,365   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_connected_subfragment(int, int, const char*, const char*, const char*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&)’:
2023-08-31T12:26:06,365   moleculekit/atomselect_utils/atomselect_utils.cpp:23820:161: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-31T12:26:06,365   23820 |       __pyx_t_3 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_2 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_resnum);
2023-08-31T12:26:06,366         |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2023-08-31T12:26:06,370   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2023-08-31T12:26:06,370   moleculekit/atomselect_utils/atomselect_utils.cpp:24075:163: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-31T12:26:06,371   24075 |         __pyx_t_6 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i);
2023-08-31T12:26:06,371         |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-08-31T12:26:06,376   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments_topologically(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2023-08-31T12:26:06,376   moleculekit/atomselect_utils/atomselect_utils.cpp:24345:163: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-08-31T12:26:06,376   24345 |         __pyx_t_6 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i);
2023-08-31T12:26:06,376         |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-08-31T12:26:36,878   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils.cpython-39-arm-linux-gnueabihf.so
2023-08-31T12:26:37,217   building 'moleculekit.distance_utils' extension
2023-08-31T12:26:37,218   creating build/temp.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-08-31T12:26:37,218   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/distance_utils/distance_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.o -O3
2023-08-31T12:26:37,456   In file included from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-08-31T12:26:37,457                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-08-31T12:26:37,457                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-08-31T12:26:37,457                    from moleculekit/distance_utils/distance_utils.cpp:1192:
2023-08-31T12:26:37,457   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-08-31T12:26:37,457      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-08-31T12:26:37,457         |  ^~~~~~~
2023-08-31T12:27:09,545   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils.cpython-39-arm-linux-gnueabihf.so
2023-08-31T12:27:09,872   building 'moleculekit.occupancy_utils' extension
2023-08-31T12:27:09,872   creating build/temp.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-08-31T12:27:09,873   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/occupancy_utils/occupancy_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.o -O3
2023-08-31T12:27:10,138   In file included from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-08-31T12:27:10,138                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-08-31T12:27:10,138                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-08-31T12:27:10,138                    from moleculekit/occupancy_utils/occupancy_utils.cpp:1192:
2023-08-31T12:27:10,138   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-08-31T12:27:10,139      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-08-31T12:27:10,139         |  ^~~~~~~
2023-08-31T12:27:33,098   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils.cpython-39-arm-linux-gnueabihf.so
2023-08-31T12:27:33,308   building 'moleculekit.xtc' extension
2023-08-31T12:27:33,309   creating build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-08-31T12:27:33,310   creating build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-08-31T12:27:33,311   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/src/xdrfile.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile.o
2023-08-31T12:27:33,552   moleculekit/xtc_utils/src/xdrfile.cpp:66:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-08-31T12:27:33,552      66 |  "OK",
2023-08-31T12:27:33,552         |  ^~~~
2023-08-31T12:27:33,552   moleculekit/xtc_utils/src/xdrfile.cpp:67:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-08-31T12:27:33,553      67 |  "Header",
2023-08-31T12:27:33,553         |  ^~~~~~~~
2023-08-31T12:27:33,553   moleculekit/xtc_utils/src/xdrfile.cpp:68:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-08-31T12:27:33,553      68 |  "String",
2023-08-31T12:27:33,553         |  ^~~~~~~~
2023-08-31T12:27:33,553   moleculekit/xtc_utils/src/xdrfile.cpp:69:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-08-31T12:27:33,554      69 |  "Double",
2023-08-31T12:27:33,554         |  ^~~~~~~~
2023-08-31T12:27:33,554   moleculekit/xtc_utils/src/xdrfile.cpp:70:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-08-31T12:27:33,554      70 |  "Integer",
2023-08-31T12:27:33,554         |  ^~~~~~~~~
2023-08-31T12:27:33,554   moleculekit/xtc_utils/src/xdrfile.cpp:71:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-08-31T12:27:33,555      71 |  "Float",
2023-08-31T12:27:33,555         |  ^~~~~~~
2023-08-31T12:27:33,555   moleculekit/xtc_utils/src/xdrfile.cpp:72:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-08-31T12:27:33,555      72 |  "Unsigned integer",
2023-08-31T12:27:33,555         |  ^~~~~~~~~~~~~~~~~~
2023-08-31T12:27:33,556   moleculekit/xtc_utils/src/xdrfile.cpp:73:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-08-31T12:27:33,556      73 |  "Compressed 3D coordinate",
2023-08-31T12:27:33,556         |  ^~~~~~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:27:33,556   moleculekit/xtc_utils/src/xdrfile.cpp:74:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-08-31T12:27:33,556      74 |  "Closing file",
2023-08-31T12:27:33,556         |  ^~~~~~~~~~~~~~
2023-08-31T12:27:33,556   moleculekit/xtc_utils/src/xdrfile.cpp:75:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-08-31T12:27:33,557      75 |  "Magic number",
2023-08-31T12:27:33,557         |  ^~~~~~~~~~~~~~
2023-08-31T12:27:33,557   moleculekit/xtc_utils/src/xdrfile.cpp:76:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-08-31T12:27:33,557      76 |  "Not enough memory",
2023-08-31T12:27:33,557         |  ^~~~~~~~~~~~~~~~~~~
2023-08-31T12:27:33,557   moleculekit/xtc_utils/src/xdrfile.cpp:77:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-08-31T12:27:33,558      77 |  "End of file",
2023-08-31T12:27:33,558         |  ^~~~~~~~~~~~~
2023-08-31T12:27:33,558   moleculekit/xtc_utils/src/xdrfile.cpp:78:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-08-31T12:27:33,558      78 |  "File not found"
2023-08-31T12:27:33,558         |  ^~~~~~~~~~~~~~~~
2023-08-31T12:27:33,566   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int sizeofint(int)’:
2023-08-31T12:27:33,567   moleculekit/xtc_utils/src/xdrfile.cpp:459:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-08-31T12:27:33,567     459 |     while (size >= num && num_of_bits < 32)
2023-08-31T12:27:33,567         |            ~~~~~^~~~~~
2023-08-31T12:27:33,568   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int sizeofints(int, unsigned int*)’:
2023-08-31T12:27:33,568   moleculekit/xtc_utils/src/xdrfile.cpp:505:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-08-31T12:27:33,568     505 |     while (bytes[num_of_bytes] >= num)
2023-08-31T12:27:33,568         |            ~~~~~~~~~~~~~~~~~~~~^~~~~~
2023-08-31T12:27:33,571   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘void encodeints(int*, int, int, unsigned int*, unsigned int*)’:
2023-08-31T12:27:33,571   moleculekit/xtc_utils/src/xdrfile.cpp:614:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-08-31T12:27:33,571     614 |     if (num_of_bits >= num_of_bytes * 8)
2023-08-31T12:27:33,571         |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
2023-08-31T12:27:33,572   moleculekit/xtc_utils/src/xdrfile.cpp:616:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-08-31T12:27:33,572     616 |   for (i = 0; i < num_of_bytes; i++)
2023-08-31T12:27:33,572         |               ~~^~~~~~~~~~~~~~
2023-08-31T12:27:33,573   moleculekit/xtc_utils/src/xdrfile.cpp:624:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-08-31T12:27:33,573     624 |   for (i = 0; i < num_of_bytes-1; i++)
2023-08-31T12:27:33,573         |               ~~^~~~~~~~~~~~~~~~
2023-08-31T12:27:33,574   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int decodebits(int*, int)’:
2023-08-31T12:27:33,575   moleculekit/xtc_utils/src/xdrfile.cpp:664:16: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-08-31T12:27:33,575     664 |   if (lastbits < num_of_bits)
2023-08-31T12:27:33,575         |       ~~~~~~~~~^~~~~~~~~~~~~
2023-08-31T12:27:33,579   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_float(float*, int*, float*, XDRFILE*)’:
2023-08-31T12:27:33,579   moleculekit/xtc_utils/src/xdrfile.cpp:785:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-08-31T12:27:33,579     785 |  if(size3>xfp->buf1size)
2023-08-31T12:27:33,579         |     ~~~~~^~~~~~~~~~~~~~
2023-08-31T12:27:33,581   moleculekit/xtc_utils/src/xdrfile.cpp:842:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-08-31T12:27:33,581     842 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-08-31T12:27:33,581         |                   ^
2023-08-31T12:27:33,584   moleculekit/xtc_utils/src/xdrfile.cpp:932:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-08-31T12:27:33,584     932 |     if(countmjh >= size3 ) { return -1; }
2023-08-31T12:27:33,584         |        ~~~~~~~~~^~~~~~~~
2023-08-31T12:27:33,584   moleculekit/xtc_utils/src/xdrfile.cpp:935:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-08-31T12:27:33,584     935 |     if(countmjh >= size3 ) { return -1; }
2023-08-31T12:27:33,585         |        ~~~~~~~~~^~~~~~~~
2023-08-31T12:27:33,585   moleculekit/xtc_utils/src/xdrfile.cpp:938:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-08-31T12:27:33,585     938 |     if(countmjh >= size3 ) { return -1; }
2023-08-31T12:27:33,585         |        ~~~~~~~~~^~~~~~~~
2023-08-31T12:27:33,585   moleculekit/xtc_utils/src/xdrfile.cpp:945:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-08-31T12:27:33,585     945 |     if(countmjh >= size3 ) { return -1; }
2023-08-31T12:27:33,585         |        ~~~~~~~~~^~~~~~~~
2023-08-31T12:27:33,586   moleculekit/xtc_utils/src/xdrfile.cpp:948:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-08-31T12:27:33,586     948 |     if(countmjh >= size3 ) { return -1; }
2023-08-31T12:27:33,586         |        ~~~~~~~~~^~~~~~~~
2023-08-31T12:27:33,586   moleculekit/xtc_utils/src/xdrfile.cpp:951:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-08-31T12:27:33,586     951 |     if(countmjh >= size3 ) { return -1; }
2023-08-31T12:27:33,586         |        ~~~~~~~~~^~~~~~~~
2023-08-31T12:27:33,586   moleculekit/xtc_utils/src/xdrfile.cpp:756:17: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2023-08-31T12:27:33,586     756 |  int smallidx,  minidx, maxidx;
2023-08-31T12:27:33,587         |                 ^~~~~~
2023-08-31T12:27:33,587   moleculekit/xtc_utils/src/xdrfile.cpp:759:25: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2023-08-31T12:27:33,587     759 |  int smallnum, smaller, larger, i, is_smaller, run;
2023-08-31T12:27:33,587         |                         ^~~~~~
2023-08-31T12:27:33,587   moleculekit/xtc_utils/src/xdrfile.cpp:763:6: warning: unused variable ‘errval’ [-Wunused-variable]
2023-08-31T12:27:33,587     763 |  int errval=1;
2023-08-31T12:27:33,587         |      ^~~~~~
2023-08-31T12:27:33,588   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_float(float*, int, float, XDRFILE*)’:
2023-08-31T12:27:33,588   moleculekit/xtc_utils/src/xdrfile.cpp:1011:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-08-31T12:27:33,588    1011 |  if(size3>xfp->buf1size)
2023-08-31T12:27:33,589         |     ~~~~~^~~~~~~~~~~~~~
2023-08-31T12:27:33,590   moleculekit/xtc_utils/src/xdrfile.cpp:1068:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-08-31T12:27:33,590    1068 |     countmjh++; if( countmjh> size3) { return -1; }
2023-08-31T12:27:33,591         |                     ~~~~~~~~^~~~~~~
2023-08-31T12:27:33,591   moleculekit/xtc_utils/src/xdrfile.cpp:1084:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-08-31T12:27:33,591    1084 |    countmjh++; if( countmjh> size3) { return -1; }
2023-08-31T12:27:33,591         |                    ~~~~~~~~^~~~~~~
2023-08-31T12:27:33,591   moleculekit/xtc_utils/src/xdrfile.cpp:1098:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-08-31T12:27:33,592    1098 |    countmjh++; if( countmjh> size3) { return -1; }
2023-08-31T12:27:33,592         |                    ~~~~~~~~^~~~~~~
2023-08-31T12:27:33,593   moleculekit/xtc_utils/src/xdrfile.cpp:1137:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-08-31T12:27:33,593    1137 |  while (smallidx < LASTIDX && magicints[smallidx] < mindiff)
2023-08-31T12:27:33,593         |                  ^
2023-08-31T12:27:33,594   moleculekit/xtc_utils/src/xdrfile.cpp:1143:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-08-31T12:27:33,594    1143 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-08-31T12:27:33,594         |                   ^
2023-08-31T12:27:33,597   moleculekit/xtc_utils/src/xdrfile.cpp:1275:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-08-31T12:27:33,598    1275 |  if(tmp==(unsigned int)buf2[0])
2023-08-31T12:27:33,598         |     ~~~^~~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:27:33,598   moleculekit/xtc_utils/src/xdrfile.cpp:1001:6: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2023-08-31T12:27:33,598    1001 |  int errval;
2023-08-31T12:27:33,598         |      ^~~~~~
2023-08-31T12:27:33,600   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_double(double*, int*, double*, XDRFILE*)’:
2023-08-31T12:27:33,601   moleculekit/xtc_utils/src/xdrfile.cpp:1316:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-08-31T12:27:33,601    1316 |  if(size3>xfp->buf1size)
2023-08-31T12:27:33,601         |     ~~~~~^~~~~~~~~~~~~~
2023-08-31T12:27:33,602   moleculekit/xtc_utils/src/xdrfile.cpp:1377:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-08-31T12:27:33,603    1377 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-08-31T12:27:33,603         |                   ^
2023-08-31T12:27:33,605   moleculekit/xtc_utils/src/xdrfile.cpp:1289:25: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2023-08-31T12:27:33,606    1289 |  int smallidx,  maxidx, minidx;
2023-08-31T12:27:33,606         |                         ^~~~~~
2023-08-31T12:27:33,606   moleculekit/xtc_utils/src/xdrfile.cpp:1292:25: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2023-08-31T12:27:33,606    1292 |  int smallnum, smaller, larger, i, is_smaller, run;
2023-08-31T12:27:33,606         |                         ^~~~~~
2023-08-31T12:27:33,606   moleculekit/xtc_utils/src/xdrfile.cpp:1297:6: warning: unused variable ‘errval’ [-Wunused-variable]
2023-08-31T12:27:33,606    1297 |  int errval=1;
2023-08-31T12:27:33,606         |      ^~~~~~
2023-08-31T12:27:33,608   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_double(double*, int, double, XDRFILE*)’:
2023-08-31T12:27:33,608   moleculekit/xtc_utils/src/xdrfile.cpp:1513:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-08-31T12:27:33,608    1513 |  if(size3>xfp->buf1size) {
2023-08-31T12:27:33,608         |     ~~~~~^~~~~~~~~~~~~~
2023-08-31T12:27:33,612   moleculekit/xtc_utils/src/xdrfile.cpp:1628:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-08-31T12:27:33,612    1628 |  while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
2023-08-31T12:27:33,612         |                  ^
2023-08-31T12:27:33,612   moleculekit/xtc_utils/src/xdrfile.cpp:1633:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-08-31T12:27:33,613    1633 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-08-31T12:27:33,613         |                   ^
2023-08-31T12:27:33,616   moleculekit/xtc_utils/src/xdrfile.cpp:1743:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-08-31T12:27:33,616    1743 |  if(tmp==(unsigned int)buf2[0])
2023-08-31T12:27:33,616         |     ~~~^~~~~~~~~~~~~~~~~~~~~~~
2023-08-31T12:27:33,617   moleculekit/xtc_utils/src/xdrfile.cpp:1504:6: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2023-08-31T12:27:33,617    1504 |  int errval=1;
2023-08-31T12:27:33,617         |      ^~~~~~
2023-08-31T12:27:35,866   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/src/xdrfile_xtc.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile_xtc.o
2023-08-31T12:27:36,122   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/src/xtc.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xtc.o
2023-08-31T12:27:36,730   moleculekit/xtc_utils/src/xtc.cpp: In function ‘void xtc_read_new(char*, float*, float*, float*, int*, int, int)’:
2023-08-31T12:27:36,731   moleculekit/xtc_utils/src/xtc.cpp:207:6: warning: unused variable ‘nf3’ [-Wunused-variable]
2023-08-31T12:27:36,731     207 |  int nf3 = nframes * 3; // Precalculate 3 * nframes for the coordinate lookup macro
2023-08-31T12:27:36,731         |      ^~~
2023-08-31T12:27:36,738   moleculekit/xtc_utils/src/xtc.cpp: In function ‘int xtc_write(char*, int, int, int*, float*, float*, float*)’:
2023-08-31T12:27:36,738   moleculekit/xtc_utils/src/xtc.cpp:418:6: warning: unused variable ‘nf3’ [-Wunused-variable]
2023-08-31T12:27:36,738     418 |  int nf3 = nframes * 3;
2023-08-31T12:27:36,738         |      ^~~
2023-08-31T12:27:36,743   moleculekit/xtc_utils/src/xtc.cpp: In function ‘void xtc_read_frame(char*, float*, float*, float*, int*, int, int, int, int)’:
2023-08-31T12:27:36,744   moleculekit/xtc_utils/src/xtc.cpp:491:6: warning: unused variable ‘reading_index’ [-Wunused-variable]
2023-08-31T12:27:36,744     491 |  int reading_index = 0;
2023-08-31T12:27:36,744         |      ^~~~~~~~~~~~~
2023-08-31T12:27:36,744   moleculekit/xtc_utils/src/xtc.cpp:492:6: warning: unused variable ‘writing_index’ [-Wunused-variable]
2023-08-31T12:27:36,744     492 |  int writing_index = 0;
2023-08-31T12:27:36,745         |      ^~~~~~~~~~~~~
2023-08-31T12:27:37,502   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/xtc.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.o
2023-08-31T12:27:37,740   In file included from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-08-31T12:27:37,740                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-08-31T12:27:37,741                    from /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-08-31T12:27:37,741                    from moleculekit/xtc_utils/xtc.cpp:1196:
2023-08-31T12:27:37,741   /tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-08-31T12:27:37,741      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-08-31T12:27:37,741         |  ^~~~~~~
2023-08-31T12:27:57,814   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile.o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile_xtc.o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xtc.o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/xtc.cpython-39-arm-linux-gnueabihf.so
2023-08-31T12:27:58,131   building 'moleculekit.tmalign' extension
2023-08-31T12:27:58,132   creating build/temp.linux-armv7l-cpython-39/moleculekit/tmalign
2023-08-31T12:27:58,132   creating build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/src
2023-08-31T12:27:58,133   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/tmalign/src/TMAlign.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/src/TMAlign.o -w
2023-08-31T12:28:27,575   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-ejzrvs55/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/tmalign/tmalign_util.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.o -w
2023-08-31T12:28:46,056   In file included from /usr/include/c++/10/vector:72,
2023-08-31T12:28:46,056                    from moleculekit/tmalign/tmalign_util.cpp:1207:
2023-08-31T12:28:46,056   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2023-08-31T12:28:46,057   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2023-08-31T12:28:46,057     426 |       vector<_Tp, _Alloc>::
2023-08-31T12:28:46,057         |       ^~~~~~~~~~~~~~~~~~~
2023-08-31T12:28:46,642   In file included from /usr/include/c++/10/vector:67,
2023-08-31T12:28:46,642                    from moleculekit/tmalign/tmalign_util.cpp:1207:
2023-08-31T12:28:46,642   /usr/include/c++/10/bits/stl_vector.h: In function ‘PyObject* __pyx_pw_11moleculekit_7tmalign_1tmalign(PyObject*, PyObject* const*, Py_ssize_t, PyObject*)’:
2023-08-31T12:28:46,643   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-08-31T12:28:46,643    1198 |    _M_realloc_insert(end(), __x);
2023-08-31T12:28:46,643         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-08-31T12:28:46,643   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-08-31T12:28:46,643    1198 |    _M_realloc_insert(end(), __x);
2023-08-31T12:28:46,643         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-08-31T12:28:46,644   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-08-31T12:28:46,644    1198 |    _M_realloc_insert(end(), __x);
2023-08-31T12:28:46,644         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-08-31T12:28:49,130   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/src/TMAlign.o build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/tmalign.cpython-39-arm-linux-gnueabihf.so
2023-08-31T12:28:49,578   UPDATING build/lib.linux-armv7l-cpython-39/moleculekit/_version.py
2023-08-31T12:28:49,578   set build/lib.linux-armv7l-cpython-39/moleculekit/_version.py to '1.7.8'
2023-08-31T12:28:49,578   installing to build/bdist.linux-armv7l/wheel
2023-08-31T12:28:49,579   running install
2023-08-31T12:28:49,604   running install_lib
2023-08-31T12:28:49,610   creating build/bdist.linux-armv7l
2023-08-31T12:28:49,610   creating build/bdist.linux-armv7l/wheel
2023-08-31T12:28:49,613   creating build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:49,614   creating build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-08-31T12:28:49,615   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-08-31T12:28:49,618   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-08-31T12:28:49,638   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:49,666   copying build/lib.linux-armv7l-cpython-39/moleculekit/home.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:49,668   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-08-31T12:28:49,669   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/analyze.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-08-31T12:28:49,671   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-08-31T12:28:49,673   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/languageparser.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-08-31T12:28:49,675   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/atomselect.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-08-31T12:28:49,678   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-08-31T12:28:49,679   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-08-31T12:28:49,682   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-08-31T12:28:49,683   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/test_tools.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-08-31T12:28:49,686   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/clustering.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-08-31T12:28:49,688   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/restrainedembed.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-08-31T12:28:49,690   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-08-31T12:28:49,691   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/test_smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-08-31T12:28:49,694   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/test_smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-08-31T12:28:49,696   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-08-31T12:28:49,699   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-08-31T12:28:49,700   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-08-31T12:28:49,703   copying build/lib.linux-armv7l-cpython-39/moleculekit/pymolgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:49,704   copying build/lib.linux-armv7l-cpython-39/moleculekit/vmd_wrapper -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:49,706   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:49,709   creating build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-08-31T12:28:49,710   copying build/lib.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-08-31T12:28:49,712   copying build/lib.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-08-31T12:28:49,739   copying build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:49,798   copying build/lib.linux-armv7l-cpython-39/moleculekit/align.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:49,800   copying build/lib.linux-armv7l-cpython-39/moleculekit/logging.ini -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:49,802   creating build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-08-31T12:28:49,803   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-08-31T12:28:49,830   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-08-31T12:28:49,833   creating build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-08-31T12:28:49,834   copying build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-08-31T12:28:49,836   copying build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-08-31T12:28:49,857   copying build/lib.linux-armv7l-cpython-39/moleculekit/config.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:49,859   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:49,907   copying build/lib.linux-armv7l-cpython-39/moleculekit/vmdgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:49,910   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:49,931   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2023-08-31T12:28:49,932   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-08-31T12:28:49,933   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/PdbxReaderTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-08-31T12:28:49,936   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/PdbxWriterTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-08-31T12:28:49,938   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-08-31T12:28:49,940   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-08-31T12:28:49,943   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-08-31T12:28:49,944   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/PdbxParser.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-08-31T12:28:49,947   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/PdbxContainers.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-08-31T12:28:49,950   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/PdbxReader.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-08-31T12:28:49,953   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-08-31T12:28:49,955   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-08-31T12:28:49,956   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer/PdbxWriter.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-08-31T12:28:49,958   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-08-31T12:28:49,960   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2023-08-31T12:28:49,962   copying build/lib.linux-armv7l-cpython-39/moleculekit/_version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:49,963   copying build/lib.linux-armv7l-cpython-39/moleculekit/dihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:49,966   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-08-31T12:28:49,968   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-08-31T12:28:49,969   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-08-31T12:28:49,989   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-08-31T12:28:49,991   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-08-31T12:28:50,013   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/interactions.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-08-31T12:28:50,015   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-08-31T12:28:50,037   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-08-31T12:28:50,059   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-08-31T12:28:50,081   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-08-31T12:28:50,081   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-08-31T12:28:50,084   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-08-31T12:28:50,104   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-08-31T12:28:50,107   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-08-31T12:28:50,108   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-08-31T12:28:50,111   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-08-31T12:28:50,132   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-08-31T12:28:50,134   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-08-31T12:28:50,136   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-08-31T12:28:50,162   copying build/lib.linux-armv7l-cpython-39/moleculekit/rcsb.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:50,164   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:50,190   copying build/lib.linux-armv7l-cpython-39/moleculekit/writers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:50,193   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:50,216   creating build/bdist.linux-armv7l/wheel/moleculekit/share
2023-08-31T12:28:50,217   creating build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2023-08-31T12:28:50,218   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/atomselect/atomselect.json -> build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2023-08-31T12:28:50,220   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr
2023-08-31T12:28:50,224   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,225   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/APD.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,227   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/P1L.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,228   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DPP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,230   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GNC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,232   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OMX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,233   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/004.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,235   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4IN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,237   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AA4.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,239   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2ML.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,240   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HQA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,242   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,244   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0BN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,245   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,247   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OCY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,249   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ONL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,251   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLU.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,252   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AHP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,254   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TRO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,256   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,258   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YNM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,260   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,261   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HOX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,263   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MMO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,264   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,266   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ME0.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,268   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ABA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,270   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,271   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,273   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NLE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,275   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HHK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,276   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,278   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HHK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,280   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,282   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MVA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,284   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0AF.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,285   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,287   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2MR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,289   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LYZ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,291   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,292   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HPE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,294   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,296   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,298   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/KYN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,299   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ONL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,301   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/D4P.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,303   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PCA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,305   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/FGL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,307   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/I2M.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,308   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PRK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,310   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,312   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NCY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,313   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NAL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,315   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,317   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,319   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/.gitkeep -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,320   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,322   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/APD.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,323   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,325   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,327   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CCS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,328   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/M3L.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,330   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GHG.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,332   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BTK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,334   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0BN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,335   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PCA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,337   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CGU.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,339   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,341   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TPO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,342   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GNC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,344   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TRO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,346   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,348   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BB8.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,350   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MMO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,352   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BCS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,353   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ESC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,355   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BTK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,357   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HOX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,359   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HYP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,360   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ORM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,362   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CGU.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,364   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,366   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YNM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,368   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ME0.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,369   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IIL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,371   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/1MH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,373   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,375   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/P1L.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,377   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,379   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/03Y.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,380   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,382   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AA4.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,384   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/004.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,386   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/5JP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,387   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0A1.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,390   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YCM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,392   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/SEP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,394   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GHG.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,395   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NZC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,397   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DA2.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,399   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BB8.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,400   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/D4P.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,402   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2GX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,404   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ORM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,406   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4IN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,408   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,410   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TPO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,411   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CCS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,413   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NAL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,415   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/KYN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,417   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ESC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,419   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/SEP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,420   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,422   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,424   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PRK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,426   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TY2.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,429   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/M3L.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,431   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,433   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,435   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PTR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,438   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ABA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,440   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NZC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,442   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TY2.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,444   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,447   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YCM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,449   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,451   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,453   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLZ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,455   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HPE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,457   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,460   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,462   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,464   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2AS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,466   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NCY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,468   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HQA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,471   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AHP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,473   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0A1.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,475   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2AS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,477   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLU.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,479   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DPP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,482   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAB.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,485   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,487   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/03Y.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,489   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,491   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,494   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,496   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAB.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,498   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,501   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,503   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IML.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,505   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OCY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,507   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/FGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,510   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0AF.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,512   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DA2.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,515   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TYQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,517   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,520   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,522   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IML.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,524   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2MR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,527   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,529   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IIL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,530   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,532   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HTR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,534   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2GX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,536   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NVA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,538   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/5JP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,540   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BCS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,542   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HYP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,544   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/I2M.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,546   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,547   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,549   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IGL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,551   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2ML.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,553   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,555   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/1MH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,557   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OMX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-08-31T12:28:50,559   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/opm_sequences.json -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-08-31T12:28:50,840   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/backbone.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-08-31T12:28:50,842   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/ALA.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-08-31T12:28:50,844   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:50,846   copying build/lib.linux-armv7l-cpython-39/moleculekit/periodictable.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:50,849   creating build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-08-31T12:28:50,850   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/preparation.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-08-31T12:28:50,855   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/detect.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-08-31T12:28:50,860   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/docking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-08-31T12:28:50,865   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/voxeldescriptors.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-08-31T12:28:50,867   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/preparation_customres.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-08-31T12:28:50,870   creating build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-08-31T12:28:50,871   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools/obabel_cli.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-08-31T12:28:50,873   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-08-31T12:28:50,875   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/graphalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-08-31T12:28:50,879   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/autosegment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-08-31T12:28:50,883   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/moleculechecks.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-08-31T12:28:50,888   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/crystalpacking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-08-31T12:28:50,891   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/hhblitsprofile.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-08-31T12:28:50,893   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-08-31T12:28:50,894   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/sequencestructuralalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-08-31T12:28:50,896   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/atomtyper.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-08-31T12:28:50,899   creating build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-08-31T12:28:50,900   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricsasa.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-08-31T12:28:50,902   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/projection.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-08-31T12:28:50,904   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricsecondarystructure.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-08-31T12:28:50,906   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricdihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-08-31T12:28:50,909   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricrmsd.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-08-31T12:28:50,911   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricsphericalcoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-08-31T12:28:50,913   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricdistance.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-08-31T12:28:50,916   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metriccoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-08-31T12:28:50,919   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricplumed2.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-08-31T12:28:50,921   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricshell.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-08-31T12:28:50,923   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-08-31T12:28:50,925   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricgyration.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-08-31T12:28:50,927   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-08-31T12:28:50,929   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metrictmscore.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-08-31T12:28:50,931   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricfluctuation.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-08-31T12:28:50,934   copying build/lib.linux-armv7l-cpython-39/moleculekit/wrapping.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:50,960   copying build/lib.linux-armv7l-cpython-39/moleculekit/vmdviewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:50,963   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-08-31T12:28:50,964   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-08-31T12:28:50,965   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-08-31T12:28:50,969   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile_xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-08-31T12:28:50,971   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-08-31T12:28:50,973   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtclib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-08-31T12:28:50,975   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-08-31T12:28:50,994   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-08-31T12:28:50,996   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-08-31T12:28:50,997   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include/xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-08-31T12:28:50,999   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include/xdrfile.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-08-31T12:28:51,001   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include/xdrfile_xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-08-31T12:28:51,003   copying build/lib.linux-armv7l-cpython-39/moleculekit/viewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:51,006   creating build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-08-31T12:28:51,006   copying build/lib.linux-armv7l-cpython-39/moleculekit/ply/lex.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-08-31T12:28:51,009   copying build/lib.linux-armv7l-cpython-39/moleculekit/ply/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-08-31T12:28:51,011   copying build/lib.linux-armv7l-cpython-39/moleculekit/ply/yacc.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-08-31T12:28:51,014   copying build/lib.linux-armv7l-cpython-39/moleculekit/molecule.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:51,019   copying build/lib.linux-armv7l-cpython-39/moleculekit/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:51,021   copying build/lib.linux-armv7l-cpython-39/moleculekit/readers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:51,025   copying build/lib.linux-armv7l-cpython-39/moleculekit/rdkitintegration.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:51,027   copying build/lib.linux-armv7l-cpython-39/moleculekit/util.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:51,030   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-08-31T12:28:51,030   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-08-31T12:28:51,063   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-08-31T12:28:51,065   copying build/lib.linux-armv7l-cpython-39/moleculekit/version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:51,067   copying build/lib.linux-armv7l-cpython-39/moleculekit/opm.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-08-31T12:28:51,070   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-08-31T12:28:51,071   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2023-08-31T12:28:51,072   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/src/TMAlign.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2023-08-31T12:28:51,078   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-08-31T12:28:51,103   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/tmalignlib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-08-31T12:28:51,105   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-08-31T12:28:51,107   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2023-08-31T12:28:51,108   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/include/TMAlign.h -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2023-08-31T12:28:51,110   running install_egg_info
2023-08-31T12:28:51,116   Copying moleculekit.egg-info to build/bdist.linux-armv7l/wheel/moleculekit-1.7.8-py3.9.egg-info
2023-08-31T12:28:51,128   running install_scripts
2023-08-31T12:28:51,175   creating build/bdist.linux-armv7l/wheel/moleculekit-1.7.8.dist-info/WHEEL
2023-08-31T12:28:51,178   creating '/tmp/pip-wheel-5fd4d3go/.tmp-9mzd2wvw/moleculekit-1.7.8-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-08-31T12:28:51,181   adding 'moleculekit/__init__.py'
2023-08-31T12:28:51,182   adding 'moleculekit/_version.py'
2023-08-31T12:28:51,184   adding 'moleculekit/align.py'
2023-08-31T12:28:51,538   adding 'moleculekit/atomselect_utils.cpython-39-arm-linux-gnueabihf.so'
2023-08-31T12:28:51,550   adding 'moleculekit/bondguesser.py'
2023-08-31T12:28:51,792   adding 'moleculekit/bondguesser_utils.cpython-39-arm-linux-gnueabihf.so'
2023-08-31T12:28:51,801   adding 'moleculekit/config.py'
2023-08-31T12:28:51,802   adding 'moleculekit/dihedral.py'
2023-08-31T12:28:51,803   adding 'moleculekit/distance.py'
2023-08-31T12:28:52,109   adding 'moleculekit/distance_utils.cpython-39-arm-linux-gnueabihf.so'
2023-08-31T12:28:52,120   adding 'moleculekit/home.py'
2023-08-31T12:28:52,121   adding 'moleculekit/logging.ini'
2023-08-31T12:28:52,135   adding 'moleculekit/molecule.py'
2023-08-31T12:28:52,360   adding 'moleculekit/occupancy_utils.cpython-39-arm-linux-gnueabihf.so'
2023-08-31T12:28:52,369   adding 'moleculekit/opm.py'
2023-08-31T12:28:52,371   adding 'moleculekit/periodictable.py'
2023-08-31T12:28:52,372   adding 'moleculekit/pymolgraphics.py'
2023-08-31T12:28:52,374   adding 'moleculekit/rcsb.py'
2023-08-31T12:28:52,375   adding 'moleculekit/rdkitintegration.py'
2023-08-31T12:28:52,387   adding 'moleculekit/readers.py'
2023-08-31T12:28:52,996   adding 'moleculekit/tmalign.cpython-39-arm-linux-gnueabihf.so'
2023-08-31T12:28:53,021   adding 'moleculekit/util.py'
2023-08-31T12:28:53,022   adding 'moleculekit/version.py'
2023-08-31T12:28:53,024   adding 'moleculekit/viewer.py'
2023-08-31T12:28:53,025   adding 'moleculekit/vmd_wrapper'
2023-08-31T12:28:53,027   adding 'moleculekit/vmdgraphics.py'
2023-08-31T12:28:53,029   adding 'moleculekit/vmdviewer.py'
2023-08-31T12:28:53,261   adding 'moleculekit/wrapping.cpython-39-arm-linux-gnueabihf.so'
2023-08-31T12:28:53,274   adding 'moleculekit/writers.py'
2023-08-31T12:28:53,541   adding 'moleculekit/xtc.cpython-39-arm-linux-gnueabihf.so'
2023-08-31T12:28:53,551   adding 'moleculekit/atomselect/__init__.py'
2023-08-31T12:28:53,553   adding 'moleculekit/atomselect/analyze.py'
2023-08-31T12:28:53,555   adding 'moleculekit/atomselect/atomselect.py'
2023-08-31T12:28:53,557   adding 'moleculekit/atomselect/languageparser.py'
2023-08-31T12:28:53,662   adding 'moleculekit/atomselect_utils/atomselect_utils.cpp'
2023-08-31T12:28:53,674   adding 'moleculekit/atomselect_utils/atomselect_utils.pyx'
2023-08-31T12:28:53,769   adding 'moleculekit/bondguesser_utils/bondguesser_utils.cpp'
2023-08-31T12:28:53,779   adding 'moleculekit/bondguesser_utils/bondguesser_utils.pyx'
2023-08-31T12:28:53,878   adding 'moleculekit/distance_utils/distance_utils.cpp'
2023-08-31T12:28:53,888   adding 'moleculekit/distance_utils/distance_utils.pyx'
2023-08-31T12:28:53,890   adding 'moleculekit/interactions/__init__.py'
2023-08-31T12:28:54,173   adding 'moleculekit/interactions/cationpi.cpython-39-arm-linux-gnueabihf.so'
2023-08-31T12:28:54,441   adding 'moleculekit/interactions/hbonds.cpython-39-arm-linux-gnueabihf.so'
2023-08-31T12:28:54,452   adding 'moleculekit/interactions/interactions.py'
2023-08-31T12:28:54,733   adding 'moleculekit/interactions/pipi.cpython-39-arm-linux-gnueabihf.so'
2023-08-31T12:28:55,025   adding 'moleculekit/interactions/sigmahole.cpython-39-arm-linux-gnueabihf.so'
2023-08-31T12:28:55,126   adding 'moleculekit/interactions/cationpi/cationpi.cpp'
2023-08-31T12:28:55,135   adding 'moleculekit/interactions/cationpi/cationpi.pyx'
2023-08-31T12:28:55,226   adding 'moleculekit/interactions/hbonds/hbonds.cpp'
2023-08-31T12:28:55,234   adding 'moleculekit/interactions/hbonds/hbonds.pyx'
2023-08-31T12:28:55,326   adding 'moleculekit/interactions/pipi/pipi.cpp'
2023-08-31T12:28:55,335   adding 'moleculekit/interactions/pipi/pipi.pyx'
2023-08-31T12:28:55,427   adding 'moleculekit/interactions/sigmahole/sigmahole.cpp'
2023-08-31T12:28:55,436   adding 'moleculekit/interactions/sigmahole/sigmahole.pyx'
2023-08-31T12:28:55,523   adding 'moleculekit/occupancy_utils/occupancy_utils.cpp'
2023-08-31T12:28:55,532   adding 'moleculekit/occupancy_utils/occupancy_utils.pyx'
2023-08-31T12:28:55,533   adding 'moleculekit/pdbx/__init__.py'
2023-08-31T12:28:55,537   adding 'moleculekit/pdbx/reader/PdbxContainers.py'
2023-08-31T12:28:55,540   adding 'moleculekit/pdbx/reader/PdbxParser.py'
2023-08-31T12:28:55,543   adding 'moleculekit/pdbx/reader/PdbxReader.py'
2023-08-31T12:28:55,544   adding 'moleculekit/pdbx/reader/__init__.py'
2023-08-31T12:28:55,546   adding 'moleculekit/pdbx/tests/PdbxReadWriteTests.py'
2023-08-31T12:28:55,548   adding 'moleculekit/pdbx/tests/PdbxReaderTests.py'
2023-08-31T12:28:55,549   adding 'moleculekit/pdbx/tests/PdbxWriterTests.py'
2023-08-31T12:28:55,550   adding 'moleculekit/pdbx/tests/__init__.py'
2023-08-31T12:28:55,552   adding 'moleculekit/pdbx/writer/PdbxWriter.py'
2023-08-31T12:28:55,554   adding 'moleculekit/pdbx/writer/__init__.py'
2023-08-31T12:28:55,555   adding 'moleculekit/ply/__init__.py'
2023-08-31T12:28:55,560   adding 'moleculekit/ply/lex.py'
2023-08-31T12:28:55,571   adding 'moleculekit/ply/yacc.py'
2023-08-31T12:28:55,574   adding 'moleculekit/projections/__init__.py'
2023-08-31T12:28:55,576   adding 'moleculekit/projections/metriccoordinate.py'
2023-08-31T12:28:55,579   adding 'moleculekit/projections/metricdihedral.py'
2023-08-31T12:28:55,583   adding 'moleculekit/projections/metricdistance.py'
2023-08-31T12:28:55,586   adding 'moleculekit/projections/metricfluctuation.py'
2023-08-31T12:28:55,587   adding 'moleculekit/projections/metricgyration.py'
2023-08-31T12:28:55,591   adding 'moleculekit/projections/metricplumed2.py'
2023-08-31T12:28:55,593   adding 'moleculekit/projections/metricrmsd.py'
2023-08-31T12:28:55,595   adding 'moleculekit/projections/metricsasa.py'
2023-08-31T12:28:55,597   adding 'moleculekit/projections/metricsecondarystructure.py'
2023-08-31T12:28:55,599   adding 'moleculekit/projections/metricshell.py'
2023-08-31T12:28:55,601   adding 'moleculekit/projections/metricsphericalcoordinate.py'
2023-08-31T12:28:55,602   adding 'moleculekit/projections/metrictmscore.py'
2023-08-31T12:28:55,604   adding 'moleculekit/projections/projection.py'
2023-08-31T12:28:55,605   adding 'moleculekit/projections/util.py'
2023-08-31T12:28:55,608   adding 'moleculekit/share/ALA.cif'
2023-08-31T12:28:55,609   adding 'moleculekit/share/backbone.cif'
2023-08-31T12:28:56,923   adding 'moleculekit/share/opm_sequences.json'
2023-08-31T12:28:57,008   adding 'moleculekit/share/atomselect/atomselect.json'
2023-08-31T12:28:57,013   adding 'moleculekit/share/pdb2pqr/residues/.gitkeep'
2023-08-31T12:28:57,014   adding 'moleculekit/share/pdb2pqr/residues/004.dat'
2023-08-31T12:28:57,016   adding 'moleculekit/share/pdb2pqr/residues/004.xml'
2023-08-31T12:28:57,017   adding 'moleculekit/share/pdb2pqr/residues/03Y.dat'
2023-08-31T12:28:57,018   adding 'moleculekit/share/pdb2pqr/residues/03Y.xml'
2023-08-31T12:28:57,019   adding 'moleculekit/share/pdb2pqr/residues/0A1.dat'
2023-08-31T12:28:57,021   adding 'moleculekit/share/pdb2pqr/residues/0A1.xml'
2023-08-31T12:28:57,022   adding 'moleculekit/share/pdb2pqr/residues/0AF.dat'
2023-08-31T12:28:57,023   adding 'moleculekit/share/pdb2pqr/residues/0AF.xml'
2023-08-31T12:28:57,024   adding 'moleculekit/share/pdb2pqr/residues/0BN.dat'
2023-08-31T12:28:57,026   adding 'moleculekit/share/pdb2pqr/residues/0BN.xml'
2023-08-31T12:28:57,027   adding 'moleculekit/share/pdb2pqr/residues/1MH.dat'
2023-08-31T12:28:57,028   adding 'moleculekit/share/pdb2pqr/residues/1MH.xml'
2023-08-31T12:28:57,029   adding 'moleculekit/share/pdb2pqr/residues/2AS.dat'
2023-08-31T12:28:57,031   adding 'moleculekit/share/pdb2pqr/residues/2AS.xml'
2023-08-31T12:28:57,032   adding 'moleculekit/share/pdb2pqr/residues/2GX.dat'
2023-08-31T12:28:57,033   adding 'moleculekit/share/pdb2pqr/residues/2GX.xml'
2023-08-31T12:28:57,034   adding 'moleculekit/share/pdb2pqr/residues/2ML.dat'
2023-08-31T12:28:57,036   adding 'moleculekit/share/pdb2pqr/residues/2ML.xml'
2023-08-31T12:28:57,037   adding 'moleculekit/share/pdb2pqr/residues/2MR.dat'
2023-08-31T12:28:57,038   adding 'moleculekit/share/pdb2pqr/residues/2MR.xml'
2023-08-31T12:28:57,039   adding 'moleculekit/share/pdb2pqr/residues/4IN.dat'
2023-08-31T12:28:57,041   adding 'moleculekit/share/pdb2pqr/residues/4IN.xml'
2023-08-31T12:28:57,042   adding 'moleculekit/share/pdb2pqr/residues/4PH.dat'
2023-08-31T12:28:57,043   adding 'moleculekit/share/pdb2pqr/residues/4PH.xml'
2023-08-31T12:28:57,044   adding 'moleculekit/share/pdb2pqr/residues/4PQ.dat'
2023-08-31T12:28:57,046   adding 'moleculekit/share/pdb2pqr/residues/4PQ.xml'
2023-08-31T12:28:57,047   adding 'moleculekit/share/pdb2pqr/residues/5JP.dat'
2023-08-31T12:28:57,048   adding 'moleculekit/share/pdb2pqr/residues/5JP.xml'
2023-08-31T12:28:57,049   adding 'moleculekit/share/pdb2pqr/residues/AA4.dat'
2023-08-31T12:28:57,050   adding 'moleculekit/share/pdb2pqr/residues/AA4.xml'
2023-08-31T12:28:57,052   adding 'moleculekit/share/pdb2pqr/residues/ABA.dat'
2023-08-31T12:28:57,053   adding 'moleculekit/share/pdb2pqr/residues/ABA.xml'
2023-08-31T12:28:57,054   adding 'moleculekit/share/pdb2pqr/residues/AHP.dat'
2023-08-31T12:28:57,055   adding 'moleculekit/share/pdb2pqr/residues/AHP.xml'
2023-08-31T12:28:57,056   adding 'moleculekit/share/pdb2pqr/residues/ALC.dat'
2023-08-31T12:28:57,058   adding 'moleculekit/share/pdb2pqr/residues/ALC.xml'
2023-08-31T12:28:57,059   adding 'moleculekit/share/pdb2pqr/residues/ALN.dat'
2023-08-31T12:28:57,060   adding 'moleculekit/share/pdb2pqr/residues/ALN.xml'
2023-08-31T12:28:57,061   adding 'moleculekit/share/pdb2pqr/residues/ALY.dat'
2023-08-31T12:28:57,063   adding 'moleculekit/share/pdb2pqr/residues/ALY.xml'
2023-08-31T12:28:57,064   adding 'moleculekit/share/pdb2pqr/residues/APD.dat'
2023-08-31T12:28:57,065   adding 'moleculekit/share/pdb2pqr/residues/APD.xml'
2023-08-31T12:28:57,066   adding 'moleculekit/share/pdb2pqr/residues/BB8.dat'
2023-08-31T12:28:57,068   adding 'moleculekit/share/pdb2pqr/residues/BB8.xml'
2023-08-31T12:28:57,069   adding 'moleculekit/share/pdb2pqr/residues/BCS.dat'
2023-08-31T12:28:57,070   adding 'moleculekit/share/pdb2pqr/residues/BCS.xml'
2023-08-31T12:28:57,072   adding 'moleculekit/share/pdb2pqr/residues/BTK.dat'
2023-08-31T12:28:57,073   adding 'moleculekit/share/pdb2pqr/residues/BTK.xml'
2023-08-31T12:28:57,074   adding 'moleculekit/share/pdb2pqr/residues/CCS.dat'
2023-08-31T12:28:57,075   adding 'moleculekit/share/pdb2pqr/residues/CCS.xml'
2023-08-31T12:28:57,077   adding 'moleculekit/share/pdb2pqr/residues/CGU.dat'
2023-08-31T12:28:57,078   adding 'moleculekit/share/pdb2pqr/residues/CGU.xml'
2023-08-31T12:28:57,079   adding 'moleculekit/share/pdb2pqr/residues/CSA.dat'
2023-08-31T12:28:57,080   adding 'moleculekit/share/pdb2pqr/residues/CSA.xml'
2023-08-31T12:28:57,082   adding 'moleculekit/share/pdb2pqr/residues/CSO.dat'
2023-08-31T12:28:57,083   adding 'moleculekit/share/pdb2pqr/residues/CSO.xml'
2023-08-31T12:28:57,084   adding 'moleculekit/share/pdb2pqr/residues/CSP.dat'
2023-08-31T12:28:57,085   adding 'moleculekit/share/pdb2pqr/residues/CSP.xml'
2023-08-31T12:28:57,087   adding 'moleculekit/share/pdb2pqr/residues/CSS.dat'
2023-08-31T12:28:57,088   adding 'moleculekit/share/pdb2pqr/residues/CSS.xml'
2023-08-31T12:28:57,089   adding 'moleculekit/share/pdb2pqr/residues/D4P.dat'
2023-08-31T12:28:57,090   adding 'moleculekit/share/pdb2pqr/residues/D4P.xml'
2023-08-31T12:28:57,091   adding 'moleculekit/share/pdb2pqr/residues/DA2.dat'
2023-08-31T12:28:57,093   adding 'moleculekit/share/pdb2pqr/residues/DA2.xml'
2023-08-31T12:28:57,094   adding 'moleculekit/share/pdb2pqr/residues/DAB.dat'
2023-08-31T12:28:57,095   adding 'moleculekit/share/pdb2pqr/residues/DAB.xml'
2023-08-31T12:28:57,097   adding 'moleculekit/share/pdb2pqr/residues/DAH.dat'
2023-08-31T12:28:57,098   adding 'moleculekit/share/pdb2pqr/residues/DAH.xml'
2023-08-31T12:28:57,099   adding 'moleculekit/share/pdb2pqr/residues/DPP.dat'
2023-08-31T12:28:57,100   adding 'moleculekit/share/pdb2pqr/residues/DPP.xml'
2023-08-31T12:28:57,101   adding 'moleculekit/share/pdb2pqr/residues/ESC.dat'
2023-08-31T12:28:57,103   adding 'moleculekit/share/pdb2pqr/residues/ESC.xml'
2023-08-31T12:28:57,104   adding 'moleculekit/share/pdb2pqr/residues/FGL.dat'
2023-08-31T12:28:57,105   adding 'moleculekit/share/pdb2pqr/residues/FGL.xml'
2023-08-31T12:28:57,106   adding 'moleculekit/share/pdb2pqr/residues/GHG.dat'
2023-08-31T12:28:57,108   adding 'moleculekit/share/pdb2pqr/residues/GHG.xml'
2023-08-31T12:28:57,109   adding 'moleculekit/share/pdb2pqr/residues/GME.dat'
2023-08-31T12:28:57,110   adding 'moleculekit/share/pdb2pqr/residues/GME.xml'
2023-08-31T12:28:57,111   adding 'moleculekit/share/pdb2pqr/residues/GNC.dat'
2023-08-31T12:28:57,113   adding 'moleculekit/share/pdb2pqr/residues/GNC.xml'
2023-08-31T12:28:57,114   adding 'moleculekit/share/pdb2pqr/residues/HHK.dat'
2023-08-31T12:28:57,115   adding 'moleculekit/share/pdb2pqr/residues/HHK.xml'
2023-08-31T12:28:57,117   adding 'moleculekit/share/pdb2pqr/residues/HLU.dat'
2023-08-31T12:28:57,118   adding 'moleculekit/share/pdb2pqr/residues/HLU.xml'
2023-08-31T12:28:57,119   adding 'moleculekit/share/pdb2pqr/residues/HLX.dat'
2023-08-31T12:28:57,120   adding 'moleculekit/share/pdb2pqr/residues/HLX.xml'
2023-08-31T12:28:57,122   adding 'moleculekit/share/pdb2pqr/residues/HOX.dat'
2023-08-31T12:28:57,123   adding 'moleculekit/share/pdb2pqr/residues/HOX.xml'
2023-08-31T12:28:57,124   adding 'moleculekit/share/pdb2pqr/residues/HPE.dat'
2023-08-31T12:28:57,125   adding 'moleculekit/share/pdb2pqr/residues/HPE.xml'
2023-08-31T12:28:57,127   adding 'moleculekit/share/pdb2pqr/residues/HQA.dat'
2023-08-31T12:28:57,128   adding 'moleculekit/share/pdb2pqr/residues/HQA.xml'
2023-08-31T12:28:57,129   adding 'moleculekit/share/pdb2pqr/residues/HTR.dat'
2023-08-31T12:28:57,131   adding 'moleculekit/share/pdb2pqr/residues/HTR.xml'
2023-08-31T12:28:57,132   adding 'moleculekit/share/pdb2pqr/residues/HYP.dat'
2023-08-31T12:28:57,133   adding 'moleculekit/share/pdb2pqr/residues/HYP.xml'
2023-08-31T12:28:57,134   adding 'moleculekit/share/pdb2pqr/residues/I2M.dat'
2023-08-31T12:28:57,136   adding 'moleculekit/share/pdb2pqr/residues/I2M.xml'
2023-08-31T12:28:57,137   adding 'moleculekit/share/pdb2pqr/residues/IGL.dat'
2023-08-31T12:28:57,138   adding 'moleculekit/share/pdb2pqr/residues/IGL.xml'
2023-08-31T12:28:57,139   adding 'moleculekit/share/pdb2pqr/residues/IIL.dat'
2023-08-31T12:28:57,141   adding 'moleculekit/share/pdb2pqr/residues/IIL.xml'
2023-08-31T12:28:57,142   adding 'moleculekit/share/pdb2pqr/residues/IML.dat'
2023-08-31T12:28:57,143   adding 'moleculekit/share/pdb2pqr/residues/IML.xml'
2023-08-31T12:28:57,145   adding 'moleculekit/share/pdb2pqr/residues/KYN.dat'
2023-08-31T12:28:57,146   adding 'moleculekit/share/pdb2pqr/residues/KYN.xml'
2023-08-31T12:28:57,147   adding 'moleculekit/share/pdb2pqr/residues/LME.dat'
2023-08-31T12:28:57,149   adding 'moleculekit/share/pdb2pqr/residues/LME.xml'
2023-08-31T12:28:57,150   adding 'moleculekit/share/pdb2pqr/residues/LMQ.dat'
2023-08-31T12:28:57,151   adding 'moleculekit/share/pdb2pqr/residues/LMQ.xml'
2023-08-31T12:28:57,152   adding 'moleculekit/share/pdb2pqr/residues/LYZ.dat'
2023-08-31T12:28:57,154   adding 'moleculekit/share/pdb2pqr/residues/LYZ.xml'
2023-08-31T12:28:57,155   adding 'moleculekit/share/pdb2pqr/residues/M3L.dat'
2023-08-31T12:28:57,156   adding 'moleculekit/share/pdb2pqr/residues/M3L.xml'
2023-08-31T12:28:57,157   adding 'moleculekit/share/pdb2pqr/residues/ME0.dat'
2023-08-31T12:28:57,161   adding 'moleculekit/share/pdb2pqr/residues/ME0.xml'
2023-08-31T12:28:57,162   adding 'moleculekit/share/pdb2pqr/residues/MEA.dat'
2023-08-31T12:28:57,164   adding 'moleculekit/share/pdb2pqr/residues/MEA.xml'
2023-08-31T12:28:57,165   adding 'moleculekit/share/pdb2pqr/residues/MEN.dat'
2023-08-31T12:28:57,166   adding 'moleculekit/share/pdb2pqr/residues/MEN.xml'
2023-08-31T12:28:57,167   adding 'moleculekit/share/pdb2pqr/residues/MEQ.dat'
2023-08-31T12:28:57,169   adding 'moleculekit/share/pdb2pqr/residues/MEQ.xml'
2023-08-31T12:28:57,170   adding 'moleculekit/share/pdb2pqr/residues/MLE.dat'
2023-08-31T12:28:57,171   adding 'moleculekit/share/pdb2pqr/residues/MLE.xml'
2023-08-31T12:28:57,172   adding 'moleculekit/share/pdb2pqr/residues/MLY.dat'
2023-08-31T12:28:57,174   adding 'moleculekit/share/pdb2pqr/residues/MLY.xml'
2023-08-31T12:28:57,175   adding 'moleculekit/share/pdb2pqr/residues/MLZ.dat'
2023-08-31T12:28:57,176   adding 'moleculekit/share/pdb2pqr/residues/MLZ.xml'
2023-08-31T12:28:57,178   adding 'moleculekit/share/pdb2pqr/residues/MME.dat'
2023-08-31T12:28:57,179   adding 'moleculekit/share/pdb2pqr/residues/MME.xml'
2023-08-31T12:28:57,180   adding 'moleculekit/share/pdb2pqr/residues/MMO.dat'
2023-08-31T12:28:57,181   adding 'moleculekit/share/pdb2pqr/residues/MMO.xml'
2023-08-31T12:28:57,183   adding 'moleculekit/share/pdb2pqr/residues/MVA.dat'
2023-08-31T12:28:57,184   adding 'moleculekit/share/pdb2pqr/residues/MVA.xml'
2023-08-31T12:28:57,185   adding 'moleculekit/share/pdb2pqr/residues/NAL.dat'
2023-08-31T12:28:57,186   adding 'moleculekit/share/pdb2pqr/residues/NAL.xml'
2023-08-31T12:28:57,188   adding 'moleculekit/share/pdb2pqr/residues/NCY.dat'
2023-08-31T12:28:57,189   adding 'moleculekit/share/pdb2pqr/residues/NCY.xml'
2023-08-31T12:28:57,190   adding 'moleculekit/share/pdb2pqr/residues/NLE.dat'
2023-08-31T12:28:57,191   adding 'moleculekit/share/pdb2pqr/residues/NLE.xml'
2023-08-31T12:28:57,192   adding 'moleculekit/share/pdb2pqr/residues/NVA.dat'
2023-08-31T12:28:57,194   adding 'moleculekit/share/pdb2pqr/residues/NVA.xml'
2023-08-31T12:28:57,195   adding 'moleculekit/share/pdb2pqr/residues/NZC.dat'
2023-08-31T12:28:57,196   adding 'moleculekit/share/pdb2pqr/residues/NZC.xml'
2023-08-31T12:28:57,197   adding 'moleculekit/share/pdb2pqr/residues/OCY.dat'
2023-08-31T12:28:57,199   adding 'moleculekit/share/pdb2pqr/residues/OCY.xml'
2023-08-31T12:28:57,200   adding 'moleculekit/share/pdb2pqr/residues/OMX.dat'
2023-08-31T12:28:57,201   adding 'moleculekit/share/pdb2pqr/residues/OMX.xml'
2023-08-31T12:28:57,202   adding 'moleculekit/share/pdb2pqr/residues/ONL.dat'
2023-08-31T12:28:57,204   adding 'moleculekit/share/pdb2pqr/residues/ONL.xml'
2023-08-31T12:28:57,205   adding 'moleculekit/share/pdb2pqr/residues/ORM.dat'
2023-08-31T12:28:57,206   adding 'moleculekit/share/pdb2pqr/residues/ORM.xml'
2023-08-31T12:28:57,207   adding 'moleculekit/share/pdb2pqr/residues/P1L.dat'
2023-08-31T12:28:57,209   adding 'moleculekit/share/pdb2pqr/residues/P1L.xml'
2023-08-31T12:28:57,210   adding 'moleculekit/share/pdb2pqr/residues/PCA.dat'
2023-08-31T12:28:57,211   adding 'moleculekit/share/pdb2pqr/residues/PCA.xml'
2023-08-31T12:28:57,213   adding 'moleculekit/share/pdb2pqr/residues/PRK.dat'
2023-08-31T12:28:57,214   adding 'moleculekit/share/pdb2pqr/residues/PRK.xml'
2023-08-31T12:28:57,215   adding 'moleculekit/share/pdb2pqr/residues/PTR.dat'
2023-08-31T12:28:57,217   adding 'moleculekit/share/pdb2pqr/residues/PTR.xml'
2023-08-31T12:28:57,218   adding 'moleculekit/share/pdb2pqr/residues/SEP.dat'
2023-08-31T12:28:57,219   adding 'moleculekit/share/pdb2pqr/residues/SEP.xml'
2023-08-31T12:28:57,220   adding 'moleculekit/share/pdb2pqr/residues/TPO.dat'
2023-08-31T12:28:57,221   adding 'moleculekit/share/pdb2pqr/residues/TPO.xml'
2023-08-31T12:28:57,223   adding 'moleculekit/share/pdb2pqr/residues/TRO.dat'
2023-08-31T12:28:57,224   adding 'moleculekit/share/pdb2pqr/residues/TRO.xml'
2023-08-31T12:28:57,225   adding 'moleculekit/share/pdb2pqr/residues/TY2.dat'
2023-08-31T12:28:57,227   adding 'moleculekit/share/pdb2pqr/residues/TY2.xml'
2023-08-31T12:28:57,228   adding 'moleculekit/share/pdb2pqr/residues/TYQ.dat'
2023-08-31T12:28:57,229   adding 'moleculekit/share/pdb2pqr/residues/TYQ.xml'
2023-08-31T12:28:57,230   adding 'moleculekit/share/pdb2pqr/residues/YCM.dat'
2023-08-31T12:28:57,232   adding 'moleculekit/share/pdb2pqr/residues/YCM.xml'
2023-08-31T12:28:57,233   adding 'moleculekit/share/pdb2pqr/residues/YNM.dat'
2023-08-31T12:28:57,234   adding 'moleculekit/share/pdb2pqr/residues/YNM.xml'
2023-08-31T12:28:57,236   adding 'moleculekit/smallmol/__init__.py'
2023-08-31T12:28:57,241   adding 'moleculekit/smallmol/smallmol.py'
2023-08-31T12:28:57,244   adding 'moleculekit/smallmol/smallmollib.py'
2023-08-31T12:28:57,246   adding 'moleculekit/smallmol/test_smallmol.py'
2023-08-31T12:28:57,247   adding 'moleculekit/smallmol/test_smallmollib.py'
2023-08-31T12:28:57,249   adding 'moleculekit/smallmol/util.py'
2023-08-31T12:28:57,251   adding 'moleculekit/smallmol/tools/__init__.py'
2023-08-31T12:28:57,253   adding 'moleculekit/smallmol/tools/clustering.py'
2023-08-31T12:28:57,255   adding 'moleculekit/smallmol/tools/restrainedembed.py'
2023-08-31T12:28:57,257   adding 'moleculekit/smallmol/tools/test_tools.py'
2023-08-31T12:28:57,349   adding 'moleculekit/tmalign/tmalign_util.cpp'
2023-08-31T12:28:57,358   adding 'moleculekit/tmalign/tmalign_util.pyx'
2023-08-31T12:28:57,360   adding 'moleculekit/tmalign/tmalignlib.pxd'
2023-08-31T12:28:57,361   adding 'moleculekit/tmalign/include/TMAlign.h'
2023-08-31T12:28:57,380   adding 'moleculekit/tmalign/src/TMAlign.cpp'
2023-08-31T12:28:57,383   adding 'moleculekit/tools/__init__.py'
2023-08-31T12:28:57,386   adding 'moleculekit/tools/atomtyper.py'
2023-08-31T12:28:57,388   adding 'moleculekit/tools/autosegment.py'
2023-08-31T12:28:57,390   adding 'moleculekit/tools/crystalpacking.py'
2023-08-31T12:28:57,392   adding 'moleculekit/tools/detect.py'
2023-08-31T12:28:57,394   adding 'moleculekit/tools/docking.py'
2023-08-31T12:28:57,396   adding 'moleculekit/tools/graphalignment.py'
2023-08-31T12:28:57,398   adding 'moleculekit/tools/hhblitsprofile.py'
2023-08-31T12:28:57,400   adding 'moleculekit/tools/moleculechecks.py'
2023-08-31T12:28:57,406   adding 'moleculekit/tools/preparation.py'
2023-08-31T12:28:57,408   adding 'moleculekit/tools/preparation_customres.py'
2023-08-31T12:28:57,410   adding 'moleculekit/tools/sequencestructuralalignment.py'
2023-08-31T12:28:57,413   adding 'moleculekit/tools/voxeldescriptors.py'
2023-08-31T12:28:57,415   adding 'moleculekit/tools/obabel_tools/__init__.py'
2023-08-31T12:28:57,417   adding 'moleculekit/tools/obabel_tools/obabel_cli.py'
2023-08-31T12:28:57,505   adding 'moleculekit/wrapping/wrapping.cpp'
2023-08-31T12:28:57,514   adding 'moleculekit/wrapping/wrapping.pyx'
2023-08-31T12:28:57,603   adding 'moleculekit/xtc_utils/xtc.cpp'
2023-08-31T12:28:57,612   adding 'moleculekit/xtc_utils/xtc.pyx'
2023-08-31T12:28:57,613   adding 'moleculekit/xtc_utils/xtclib.pxd'
2023-08-31T12:28:57,616   adding 'moleculekit/xtc_utils/include/xdrfile.h'
2023-08-31T12:28:57,617   adding 'moleculekit/xtc_utils/include/xdrfile_xtc.h'
2023-08-31T12:28:57,619   adding 'moleculekit/xtc_utils/include/xtc.h'
2023-08-31T12:28:57,626   adding 'moleculekit/xtc_utils/src/xdrfile.cpp'
2023-08-31T12:28:57,628   adding 'moleculekit/xtc_utils/src/xdrfile_xtc.cpp'
2023-08-31T12:28:57,630   adding 'moleculekit/xtc_utils/src/xtc.cpp'
2023-08-31T12:28:57,632   adding 'moleculekit-1.7.8.dist-info/LICENSE'
2023-08-31T12:28:57,633   adding 'moleculekit-1.7.8.dist-info/METADATA'
2023-08-31T12:28:57,634   adding 'moleculekit-1.7.8.dist-info/WHEEL'
2023-08-31T12:28:57,635   adding 'moleculekit-1.7.8.dist-info/top_level.txt'
2023-08-31T12:28:57,640   adding 'moleculekit-1.7.8.dist-info/RECORD'
2023-08-31T12:28:57,776   removing build/bdist.linux-armv7l/wheel
2023-08-31T12:28:58,056   Building wheel for moleculekit (pyproject.toml): finished with status 'done'
2023-08-31T12:28:58,321   Created wheel for moleculekit: filename=moleculekit-1.7.8-cp39-cp39-linux_armv7l.whl size=12537607 sha256=5cf6fe714acd47acb946cc0b2d11ed86c11b6b457e0ee2e2da065f75d480508d
2023-08-31T12:28:58,322   Stored in directory: /tmp/pip-ephem-wheel-cache-4n8t2jlr/wheels/75/04/06/1a9dc387235e7802c3d571cfddf9d828eb7c4c6a6c3bac1f75
2023-08-31T12:28:58,347 Successfully built moleculekit
2023-08-31T12:28:58,641 Removed build tracker: '/tmp/pip-build-tracker-xnyjcedo'