2023-09-01T09:39:42,632 Created temporary directory: /tmp/pip-build-tracker-55dnz3wt
2023-09-01T09:39:42,633 Initialized build tracking at /tmp/pip-build-tracker-55dnz3wt
2023-09-01T09:39:42,633 Created build tracker: /tmp/pip-build-tracker-55dnz3wt
2023-09-01T09:39:42,634 Entered build tracker: /tmp/pip-build-tracker-55dnz3wt
2023-09-01T09:39:42,634 Created temporary directory: /tmp/pip-wheel-fsb1m0mq
2023-09-01T09:39:42,637 Created temporary directory: /tmp/pip-ephem-wheel-cache-wp3uqege
2023-09-01T09:39:42,661 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-01T09:39:42,665 2 location(s) to search for versions of flydra-core:
2023-09-01T09:39:42,665 * https://pypi.org/simple/flydra-core/
2023-09-01T09:39:42,665 * https://www.piwheels.org/simple/flydra-core/
2023-09-01T09:39:42,665 Fetching project page and analyzing links: https://pypi.org/simple/flydra-core/
2023-09-01T09:39:42,666 Getting page https://pypi.org/simple/flydra-core/
2023-09-01T09:39:42,668 Found index url https://pypi.org/simple/
2023-09-01T09:39:42,721 Fetched page https://pypi.org/simple/flydra-core/ as application/vnd.pypi.simple.v1+json
2023-09-01T09:39:42,723   Found link https://files.pythonhosted.org/packages/d6/5e/32ee2f385b11d41602ae3946fc7be395111ac2c6ab482317da7d7cffbc09/flydra_core-0.7.10.tar.gz (from https://pypi.org/simple/flydra-core/), version: 0.7.10
2023-09-01T09:39:42,724   Found link https://files.pythonhosted.org/packages/d0/db/f7aaa8a6e6a95ad52b8e82e75d608295cd9d9a12466172fa991828b27528/flydra_core-0.7.11.tar.gz (from https://pypi.org/simple/flydra-core/), version: 0.7.11
2023-09-01T09:39:42,724   Found link https://files.pythonhosted.org/packages/e4/02/387655c6c2eccefba71f9fd0b93ed976c7c9b63801f24d258602474048a9/flydra_core-0.7.12.tar.gz (from https://pypi.org/simple/flydra-core/), version: 0.7.12
2023-09-01T09:39:42,724   Found link https://files.pythonhosted.org/packages/e1/ad/ba869a951df89e63e2e27a149884ea70cdcbfa4e9d8f5c5c439de5db59d5/flydra_core-0.7.13.tar.gz (from https://pypi.org/simple/flydra-core/), version: 0.7.13
2023-09-01T09:39:42,725   Found link https://files.pythonhosted.org/packages/ba/10/131531f7b30a7ec7c57fc24892e8c53240f01699758ece05c000a33c4e61/flydra_core-0.7.14.tar.gz (from https://pypi.org/simple/flydra-core/), version: 0.7.14
2023-09-01T09:39:42,725   Found link https://files.pythonhosted.org/packages/47/2a/8de8cce5e410c3b2b0b0dc1d257b5a6ee7caee4b5d89544f784d19fd4309/flydra_core-0.7.15.tar.gz (from https://pypi.org/simple/flydra-core/) (requires-python:>=3.8), version: 0.7.15
2023-09-01T09:39:42,726   Found link https://files.pythonhosted.org/packages/e5/4a/75bdcf40f33c17b4667f47a36c7ec84d99ac61dc537f2e70655f727d3c20/flydra_core-0.7.16.tar.gz (from https://pypi.org/simple/flydra-core/) (requires-python:>=3.8), version: 0.7.16
2023-09-01T09:39:42,726 Fetching project page and analyzing links: https://www.piwheels.org/simple/flydra-core/
2023-09-01T09:39:42,726 Getting page https://www.piwheels.org/simple/flydra-core/
2023-09-01T09:39:42,727 Found index url https://www.piwheels.org/simple/
2023-09-01T09:39:42,891 Fetched page https://www.piwheels.org/simple/flydra-core/ as text/html
2023-09-01T09:39:42,899   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.15-cp39-cp39-linux_armv7l.whl#sha256=e470add313ca0c058b596e179c63d13d6832395ef14684170f0456afe38db60a (from https://www.piwheels.org/simple/flydra-core/) (requires-python:>=3.8)
2023-09-01T09:39:42,899   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.15-cp39-cp39-linux_armv6l.whl#sha256=e470add313ca0c058b596e179c63d13d6832395ef14684170f0456afe38db60a (from https://www.piwheels.org/simple/flydra-core/) (requires-python:>=3.8)
2023-09-01T09:39:42,899   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.14-cp39-cp39-linux_armv7l.whl#sha256=d3bc8999ff1853e020f3bb48464ff1a7717e3887e6a7aa98dcaa002cd5761fec (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,900   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.14-cp39-cp39-linux_armv6l.whl#sha256=d3bc8999ff1853e020f3bb48464ff1a7717e3887e6a7aa98dcaa002cd5761fec (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,900   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.14-cp37-cp37m-linux_armv7l.whl#sha256=63af59c5e709aad33bed072e7a6d169f7a89b29e06153cc0b0ba1a055673bc85 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,900   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.14-cp37-cp37m-linux_armv6l.whl#sha256=63af59c5e709aad33bed072e7a6d169f7a89b29e06153cc0b0ba1a055673bc85 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,900   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.14-cp35-cp35m-linux_armv7l.whl#sha256=3f8a0edffc02ed0827365a892bb716254cead0bb20d7d1f291afc276ca304e4a (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,900   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.14-cp35-cp35m-linux_armv6l.whl#sha256=3f8a0edffc02ed0827365a892bb716254cead0bb20d7d1f291afc276ca304e4a (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,901   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.13-cp39-cp39-linux_armv7l.whl#sha256=c8f9d7d4344b357e5ea25019ad6b85b1c9cc6468836e89acb992dfd5a7adbdc6 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,901   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.13-cp39-cp39-linux_armv6l.whl#sha256=c8f9d7d4344b357e5ea25019ad6b85b1c9cc6468836e89acb992dfd5a7adbdc6 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,901   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.13-cp37-cp37m-linux_armv7l.whl#sha256=4f9b109ae957e3becee04bbb95105c1b362142ac2a8783862f7c8bde548eed94 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,901   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.13-cp37-cp37m-linux_armv6l.whl#sha256=4f9b109ae957e3becee04bbb95105c1b362142ac2a8783862f7c8bde548eed94 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,901   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.13-cp35-cp35m-linux_armv7l.whl#sha256=7b95615cd65a695b0850d0425312a5b307491cfa2c9ff06b1e3f7352c8a4cab7 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,902   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.13-cp35-cp35m-linux_armv6l.whl#sha256=7b95615cd65a695b0850d0425312a5b307491cfa2c9ff06b1e3f7352c8a4cab7 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,902   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.11-cp37-cp37m-linux_armv7l.whl#sha256=4481fa947ab73d181ac26fe079115f36258de71caca6fa28443e4e53c39a212b (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,902   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.11-cp37-cp37m-linux_armv6l.whl#sha256=4481fa947ab73d181ac26fe079115f36258de71caca6fa28443e4e53c39a212b (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,902   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.11-cp35-cp35m-linux_armv7l.whl#sha256=9a2a07ef77eb2cd5cd2cb2359edc4c9c16104c65cc9ebbe18b58913a6b438ab8 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,902   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.11-cp35-cp35m-linux_armv6l.whl#sha256=9a2a07ef77eb2cd5cd2cb2359edc4c9c16104c65cc9ebbe18b58913a6b438ab8 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,903   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.10-cp39-cp39-linux_armv7l.whl#sha256=aac1f0e81b9da9e518121aeaf1dea0b20789c0e42dd76f375c64ea612d00127b (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,903   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.10-cp39-cp39-linux_armv6l.whl#sha256=aac1f0e81b9da9e518121aeaf1dea0b20789c0e42dd76f375c64ea612d00127b (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,903   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.10-cp35-cp35m-linux_armv7l.whl#sha256=ea95aeb43992d83ea680be08b9ffcdac3800a8956d87feaee64881a2970b5681 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,903   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.10-cp35-cp35m-linux_armv6l.whl#sha256=ea95aeb43992d83ea680be08b9ffcdac3800a8956d87feaee64881a2970b5681 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,903   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.10-cp37-cp37m-linux_armv6l.whl#sha256=1ca0df03a2f97cd7bf8bdf0bebbb6fbb9ebbc306984bb299061846a786bda323 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,904   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.10-cp37-cp37m-linux_armv7l.whl#sha256=1ca0df03a2f97cd7bf8bdf0bebbb6fbb9ebbc306984bb299061846a786bda323 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-01T09:39:42,904 Skipping link: not a file: https://www.piwheels.org/simple/flydra-core/
2023-09-01T09:39:42,904 Skipping link: not a file: https://pypi.org/simple/flydra-core/
2023-09-01T09:39:42,922 Given no hashes to check 1 links for project 'flydra-core': discarding no candidates
2023-09-01T09:39:42,939 Collecting flydra-core==0.7.16
2023-09-01T09:39:42,941   Created temporary directory: /tmp/pip-unpack-kzi447kx
2023-09-01T09:39:43,063   Downloading flydra_core-0.7.16.tar.gz (725 kB)
2023-09-01T09:39:43,413   Added flydra-core==0.7.16 from https://files.pythonhosted.org/packages/e5/4a/75bdcf40f33c17b4667f47a36c7ec84d99ac61dc537f2e70655f727d3c20/flydra_core-0.7.16.tar.gz to build tracker '/tmp/pip-build-tracker-55dnz3wt'
2023-09-01T09:39:43,420   Created temporary directory: /tmp/pip-build-env-i0zbcijw
2023-09-01T09:39:43,430   Installing build dependencies: started
2023-09-01T09:39:43,431   Running command pip subprocess to install build dependencies
2023-09-01T09:39:44,614   Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9)
2023-09-01T09:39:44,980   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-01T09:39:46,629   Collecting setuptools>=61
2023-09-01T09:39:46,712     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.1.2-py3-none-any.whl (805 kB)
2023-09-01T09:39:48,365   Collecting cython>=0.29
2023-09-01T09:39:49,166     Using cached https://www.piwheels.org/simple/cython/Cython-3.0.2-cp39-cp39-linux_armv7l.whl (10.7 MB)
2023-09-01T09:39:50,744   Collecting numpy
2023-09-01T09:39:51,662     Using cached https://www.piwheels.org/simple/numpy/numpy-1.25.2-cp39-cp39-linux_armv7l.whl (12.5 MB)
2023-09-01T09:39:53,899   Installing collected packages: setuptools, numpy, cython
2023-09-01T09:40:04,381     Creating /tmp/pip-build-env-i0zbcijw/overlay/bin
2023-09-01T09:40:04,383     changing mode of /tmp/pip-build-env-i0zbcijw/overlay/bin/f2py to 755
2023-09-01T09:40:04,385     changing mode of /tmp/pip-build-env-i0zbcijw/overlay/bin/f2py3 to 755
2023-09-01T09:40:04,387     changing mode of /tmp/pip-build-env-i0zbcijw/overlay/bin/f2py3.9 to 755
2023-09-01T09:40:07,959     changing mode of /tmp/pip-build-env-i0zbcijw/overlay/bin/cygdb to 755
2023-09-01T09:40:07,961     changing mode of /tmp/pip-build-env-i0zbcijw/overlay/bin/cython to 755
2023-09-01T09:40:07,963     changing mode of /tmp/pip-build-env-i0zbcijw/overlay/bin/cythonize to 755
2023-09-01T09:40:07,985   ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.
2023-09-01T09:40:07,985   scipy 1.8.1 requires numpy<1.25.0,>=1.17.3, but you have numpy 1.25.2 which is incompatible.
2023-09-01T09:40:07,986   Successfully installed cython-3.0.2 numpy-1.25.2 setuptools-68.1.2

2023-09-01T09:40:07,999   [notice] A new release of pip is available: 23.1.2 -> 23.2.1
2023-09-01T09:40:07,999   [notice] To update, run: python3 -m pip install --upgrade pip
2023-09-01T09:40:08,382   Installing build dependencies: finished with status 'done'
2023-09-01T09:40:08,387   Getting requirements to build wheel: started
2023-09-01T09:40:08,388   Running command Getting requirements to build wheel
2023-09-01T09:40:14,844   Compiling flydra_core/_reconstruct_utils.pyx because it depends on /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/Cython/Includes/libc/math.pxd.
2023-09-01T09:40:14,844   Compiling flydra_core/_pmat_jacobian.pyx because it depends on /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-09-01T09:40:14,845   Compiling flydra_core/_pmat_jacobian_water.pyx because it depends on /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-09-01T09:40:14,845   Compiling flydra_core/_flydra_tracked_object.pyx because it depends on /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-09-01T09:40:14,845   [1/4] Cythonizing flydra_core/_reconstruct_utils.pyx
2023-09-01T09:40:14,845   [2/4] Cythonizing flydra_core/_flydra_tracked_object.pyx
2023-09-01T09:40:14,845   [3/4] Cythonizing flydra_core/_pmat_jacobian.pyx
2023-09-01T09:40:14,845   [4/4] Cythonizing flydra_core/_pmat_jacobian_water.pyx
2023-09-01T09:40:15,517   running egg_info
2023-09-01T09:40:15,522   writing flydra_core.egg-info/PKG-INFO
2023-09-01T09:40:15,524   writing dependency_links to flydra_core.egg-info/dependency_links.txt
2023-09-01T09:40:15,526   writing entry points to flydra_core.egg-info/entry_points.txt
2023-09-01T09:40:15,527   writing requirements to flydra_core.egg-info/requires.txt
2023-09-01T09:40:15,529   writing top-level names to flydra_core.egg-info/top_level.txt
2023-09-01T09:40:15,551   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_math.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:15,551   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:15,551   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:15,551   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:15,551   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:15,551   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:15,552   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:15,552   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:15,552   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:15,552   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:15,552   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:15,552   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:15,552   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:15,553   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:15,553   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:15,553   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:15,558   reading manifest file 'flydra_core.egg-info/SOURCES.txt'
2023-09-01T09:40:15,560   reading manifest template 'MANIFEST.in'
2023-09-01T09:40:15,568   writing manifest file 'flydra_core.egg-info/SOURCES.txt'
2023-09-01T09:40:15,844   Getting requirements to build wheel: finished with status 'done'
2023-09-01T09:40:15,856   Installing backend dependencies: started
2023-09-01T09:40:15,857   Running command pip subprocess to install backend dependencies
2023-09-01T09:40:17,075   Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9)
2023-09-01T09:40:17,453   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-01T09:40:17,910   Collecting wheel
2023-09-01T09:40:17,928     Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB)
2023-09-01T09:40:19,417   Installing collected packages: wheel
2023-09-01T09:40:19,643     Creating /tmp/pip-build-env-i0zbcijw/normal/bin
2023-09-01T09:40:19,645     changing mode of /tmp/pip-build-env-i0zbcijw/normal/bin/wheel to 755
2023-09-01T09:40:19,658   Successfully installed wheel-0.41.2

2023-09-01T09:40:19,670   [notice] A new release of pip is available: 23.1.2 -> 23.2.1
2023-09-01T09:40:19,671   [notice] To update, run: python3 -m pip install --upgrade pip
2023-09-01T09:40:19,881   Installing backend dependencies: finished with status 'done'
2023-09-01T09:40:19,884   Created temporary directory: /tmp/pip-modern-metadata-ll_fi8ze
2023-09-01T09:40:19,886   Preparing metadata (pyproject.toml): started
2023-09-01T09:40:19,887   Running command Preparing metadata (pyproject.toml)
2023-09-01T09:40:21,742   running dist_info
2023-09-01T09:40:21,748   creating /tmp/pip-modern-metadata-ll_fi8ze/flydra_core.egg-info
2023-09-01T09:40:21,753   writing /tmp/pip-modern-metadata-ll_fi8ze/flydra_core.egg-info/PKG-INFO
2023-09-01T09:40:21,755   writing dependency_links to /tmp/pip-modern-metadata-ll_fi8ze/flydra_core.egg-info/dependency_links.txt
2023-09-01T09:40:21,757   writing entry points to /tmp/pip-modern-metadata-ll_fi8ze/flydra_core.egg-info/entry_points.txt
2023-09-01T09:40:21,759   writing requirements to /tmp/pip-modern-metadata-ll_fi8ze/flydra_core.egg-info/requires.txt
2023-09-01T09:40:21,760   writing top-level names to /tmp/pip-modern-metadata-ll_fi8ze/flydra_core.egg-info/top_level.txt
2023-09-01T09:40:21,761   writing manifest file '/tmp/pip-modern-metadata-ll_fi8ze/flydra_core.egg-info/SOURCES.txt'
2023-09-01T09:40:21,782   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_math.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:21,782   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:21,782   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:21,782   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:21,782   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:21,783   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:21,783   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:21,783   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:21,783   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:21,783   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:21,783   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:21,783   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:21,783   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:21,784   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:21,784   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:21,784   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:21,789   reading manifest file '/tmp/pip-modern-metadata-ll_fi8ze/flydra_core.egg-info/SOURCES.txt'
2023-09-01T09:40:21,791   reading manifest template 'MANIFEST.in'
2023-09-01T09:40:21,797   writing manifest file '/tmp/pip-modern-metadata-ll_fi8ze/flydra_core.egg-info/SOURCES.txt'
2023-09-01T09:40:21,799   creating '/tmp/pip-modern-metadata-ll_fi8ze/flydra_core-0.7.16.dist-info'
2023-09-01T09:40:21,989   Preparing metadata (pyproject.toml): finished with status 'done'
2023-09-01T09:40:21,995   Source in /tmp/pip-wheel-fsb1m0mq/flydra-core_46f7d98f4e824213ac7dc56d5ff2ac83 has version 0.7.16, which satisfies requirement flydra-core==0.7.16 from https://files.pythonhosted.org/packages/e5/4a/75bdcf40f33c17b4667f47a36c7ec84d99ac61dc537f2e70655f727d3c20/flydra_core-0.7.16.tar.gz
2023-09-01T09:40:21,996   Removed flydra-core==0.7.16 from https://files.pythonhosted.org/packages/e5/4a/75bdcf40f33c17b4667f47a36c7ec84d99ac61dc537f2e70655f727d3c20/flydra_core-0.7.16.tar.gz from build tracker '/tmp/pip-build-tracker-55dnz3wt'
2023-09-01T09:40:22,003 Created temporary directory: /tmp/pip-unpack-j7i8kuie
2023-09-01T09:40:22,003 Building wheels for collected packages: flydra-core
2023-09-01T09:40:22,007   Created temporary directory: /tmp/pip-wheel-ztk7t9w2
2023-09-01T09:40:22,008   Destination directory: /tmp/pip-wheel-ztk7t9w2
2023-09-01T09:40:22,010   Building wheel for flydra-core (pyproject.toml): started
2023-09-01T09:40:22,011   Running command Building wheel for flydra-core (pyproject.toml)
2023-09-01T09:40:23,812   running bdist_wheel
2023-09-01T09:40:23,836   running build
2023-09-01T09:40:23,837   running build_py
2023-09-01T09:40:23,844   creating build
2023-09-01T09:40:23,844   creating build/lib.linux-armv7l-cpython-39
2023-09-01T09:40:23,845   creating build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,847   copying flydra_core/geom.py -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,850   copying flydra_core/debuglock.py -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,853   copying flydra_core/data_descriptions.py -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,859   copying flydra_core/test_refraction.py -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,861   copying flydra_core/reconstruct.py -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,866   copying flydra_core/common_variables.py -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,868   copying flydra_core/__init__.py -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,870   copying flydra_core/undistort.py -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,872   copying flydra_core/align.py -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,874   copying flydra_core/version.py -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,876   copying flydra_core/water.py -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,879   copying flydra_core/flydra_socket.py -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,882   creating build/lib.linux-armv7l-cpython-39/flydra_core/kalman
2023-09-01T09:40:23,883   copying flydra_core/kalman/point_prob.py -> build/lib.linux-armv7l-cpython-39/flydra_core/kalman
2023-09-01T09:40:23,886   copying flydra_core/kalman/lsprofcalltree.py -> build/lib.linux-armv7l-cpython-39/flydra_core/kalman
2023-09-01T09:40:23,888   copying flydra_core/kalman/ekf.py -> build/lib.linux-armv7l-cpython-39/flydra_core/kalman
2023-09-01T09:40:23,890   copying flydra_core/kalman/ori_smooth.py -> build/lib.linux-armv7l-cpython-39/flydra_core/kalman
2023-09-01T09:40:23,893   copying flydra_core/kalman/dynamic_models.py -> build/lib.linux-armv7l-cpython-39/flydra_core/kalman
2023-09-01T09:40:23,896   copying flydra_core/kalman/__init__.py -> build/lib.linux-armv7l-cpython-39/flydra_core/kalman
2023-09-01T09:40:23,897   copying flydra_core/kalman/flydra_kalman_utils.py -> build/lib.linux-armv7l-cpython-39/flydra_core/kalman
2023-09-01T09:40:23,900   copying flydra_core/kalman/flydra_tracker.py -> build/lib.linux-armv7l-cpython-39/flydra_core/kalman
2023-09-01T09:40:23,903   running egg_info
2023-09-01T09:40:23,908   writing flydra_core.egg-info/PKG-INFO
2023-09-01T09:40:23,910   writing dependency_links to flydra_core.egg-info/dependency_links.txt
2023-09-01T09:40:23,912   writing entry points to flydra_core.egg-info/entry_points.txt
2023-09-01T09:40:23,914   writing requirements to flydra_core.egg-info/requires.txt
2023-09-01T09:40:23,915   writing top-level names to flydra_core.egg-info/top_level.txt
2023-09-01T09:40:23,922   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_math.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:23,922   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:23,922   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:23,922   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:23,923   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:23,923   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:23,923   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:23,923   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:23,923   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:23,923   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:23,923   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:23,923   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:23,924   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:23,924   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:23,924   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:23,924   dependency /tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-01T09:40:23,930   reading manifest file 'flydra_core.egg-info/SOURCES.txt'
2023-09-01T09:40:23,932   reading manifest template 'MANIFEST.in'
2023-09-01T09:40:23,940   writing manifest file 'flydra_core.egg-info/SOURCES.txt'
2023-09-01T09:40:23,945   copying flydra_core/Roots3And4.c -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,952   copying flydra_core/Roots3And4.h -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,954   copying flydra_core/_Roots3And4.c -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,963   copying flydra_core/_Roots3And4.pxd -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,966   copying flydra_core/_Roots3And4.pyx -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,969   copying flydra_core/_fastgeom.c -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,980   copying flydra_core/_fastgeom.pxd -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,983   copying flydra_core/_fastgeom.pyx -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:23,986   copying flydra_core/_flydra_tracked_object.c -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:24,057   copying flydra_core/_flydra_tracked_object.pyx -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:24,061   copying flydra_core/_mahalanobis.c -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:24,070   copying flydra_core/_mahalanobis.pxd -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:24,073   copying flydra_core/_mahalanobis.pyx -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:24,076   copying flydra_core/_pmat_jacobian.c -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:24,092   copying flydra_core/_pmat_jacobian.pxd -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:24,094   copying flydra_core/_pmat_jacobian.pyx -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:24,097   copying flydra_core/_pmat_jacobian_water.c -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:24,113   copying flydra_core/_pmat_jacobian_water.pxd -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:24,116   copying flydra_core/_pmat_jacobian_water.pyx -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:24,119   copying flydra_core/_reconstruct_utils.c -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:24,147   copying flydra_core/_reconstruct_utils.pyx -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:24,150   copying flydra_core/_refraction.c -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:24,158   copying flydra_core/_refraction.pxd -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:24,161   copying flydra_core/_refraction.pyx -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:24,171   copying flydra_core/flydra_server_art.png -> build/lib.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:24,176   running build_ext
2023-09-01T09:40:24,183   building 'flydra_core._reconstruct_utils' extension
2023-09-01T09:40:24,184   creating build/temp.linux-armv7l-cpython-39
2023-09-01T09:40:24,184   creating build/temp.linux-armv7l-cpython-39/flydra_core
2023-09-01T09:40:24,186   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c flydra_core/_reconstruct_utils.c -o build/temp.linux-armv7l-cpython-39/flydra_core/_reconstruct_utils.o
2023-09-01T09:41:01,735   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/flydra_core/_reconstruct_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/flydra_core/_reconstruct_utils.cpython-39-arm-linux-gnueabihf.so
2023-09-01T09:41:01,943   building 'flydra_core._pmat_jacobian' extension
2023-09-01T09:41:01,944   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c flydra_core/_pmat_jacobian.c -o build/temp.linux-armv7l-cpython-39/flydra_core/_pmat_jacobian.o
2023-09-01T09:41:09,691   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/flydra_core/_pmat_jacobian.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/flydra_core/_pmat_jacobian.cpython-39-arm-linux-gnueabihf.so
2023-09-01T09:41:09,810   building 'flydra_core._pmat_jacobian_water' extension
2023-09-01T09:41:09,811   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c flydra_core/_pmat_jacobian_water.c -o build/temp.linux-armv7l-cpython-39/flydra_core/_pmat_jacobian_water.o
2023-09-01T09:41:18,982   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/flydra_core/_pmat_jacobian_water.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/flydra_core/_pmat_jacobian_water.cpython-39-arm-linux-gnueabihf.so
2023-09-01T09:41:19,105   building 'flydra_core._flydra_tracked_object' extension
2023-09-01T09:41:19,106   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/tmp/pip-build-env-i0zbcijw/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c flydra_core/_flydra_tracked_object.c -o build/temp.linux-armv7l-cpython-39/flydra_core/_flydra_tracked_object.o
2023-09-01T09:42:03,611   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/flydra_core/_flydra_tracked_object.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/flydra_core/_flydra_tracked_object.cpython-39-arm-linux-gnueabihf.so
2023-09-01T09:42:03,791   building 'flydra_core._mahalanobis' extension
2023-09-01T09:42:03,791   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/usr/include/python3.9 -c flydra_core/_mahalanobis.c -o build/temp.linux-armv7l-cpython-39/flydra_core/_mahalanobis.o
2023-09-01T09:42:09,155   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/flydra_core/_mahalanobis.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/flydra_core/_mahalanobis.cpython-39-arm-linux-gnueabihf.so
2023-09-01T09:42:09,286   building 'flydra_core._fastgeom' extension
2023-09-01T09:42:09,286   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/usr/include/python3.9 -c flydra_core/_fastgeom.c -o build/temp.linux-armv7l-cpython-39/flydra_core/_fastgeom.o
2023-09-01T09:42:16,533   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/flydra_core/_fastgeom.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/flydra_core/_fastgeom.cpython-39-arm-linux-gnueabihf.so
2023-09-01T09:42:16,659   building 'flydra_core._Roots3And4' extension
2023-09-01T09:42:16,660   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -Iflydra_core -I/usr/include/python3.9 -c flydra_core/Roots3And4.c -o build/temp.linux-armv7l-cpython-39/flydra_core/Roots3And4.o
2023-09-01T09:42:16,912   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -Iflydra_core -I/usr/include/python3.9 -c flydra_core/_Roots3And4.c -o build/temp.linux-armv7l-cpython-39/flydra_core/_Roots3And4.o
2023-09-01T09:42:20,190   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/flydra_core/Roots3And4.o build/temp.linux-armv7l-cpython-39/flydra_core/_Roots3And4.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/flydra_core/_Roots3And4.cpython-39-arm-linux-gnueabihf.so
2023-09-01T09:42:20,301   building 'flydra_core._refraction' extension
2023-09-01T09:42:20,302   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/usr/include/python3.9 -c flydra_core/_refraction.c -o build/temp.linux-armv7l-cpython-39/flydra_core/_refraction.o
2023-09-01T09:42:23,048   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/flydra_core/_refraction.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/flydra_core/_refraction.cpython-39-arm-linux-gnueabihf.so
2023-09-01T09:42:23,163   installing to build/bdist.linux-armv7l/wheel
2023-09-01T09:42:23,163   running install
2023-09-01T09:42:23,188   running install_lib
2023-09-01T09:42:23,194   creating build/bdist.linux-armv7l
2023-09-01T09:42:23,194   creating build/bdist.linux-armv7l/wheel
2023-09-01T09:42:23,196   creating build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,197   copying build/lib.linux-armv7l-cpython-39/flydra_core/_reconstruct_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,215   copying build/lib.linux-armv7l-cpython-39/flydra_core/geom.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,217   copying build/lib.linux-armv7l-cpython-39/flydra_core/Roots3And4.c -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,219   copying build/lib.linux-armv7l-cpython-39/flydra_core/_refraction.pxd -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,221   copying build/lib.linux-armv7l-cpython-39/flydra_core/_flydra_tracked_object.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,247   copying build/lib.linux-armv7l-cpython-39/flydra_core/_pmat_jacobian_water.c -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,305   copying build/lib.linux-armv7l-cpython-39/flydra_core/debuglock.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,307   copying build/lib.linux-armv7l-cpython-39/flydra_core/data_descriptions.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,309   copying build/lib.linux-armv7l-cpython-39/flydra_core/_refraction.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,314   copying build/lib.linux-armv7l-cpython-39/flydra_core/_Roots3And4.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,321   copying build/lib.linux-armv7l-cpython-39/flydra_core/_flydra_tracked_object.pyx -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,324   copying build/lib.linux-armv7l-cpython-39/flydra_core/test_refraction.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,325   copying build/lib.linux-armv7l-cpython-39/flydra_core/_pmat_jacobian.pyx -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,327   copying build/lib.linux-armv7l-cpython-39/flydra_core/_fastgeom.c -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,340   copying build/lib.linux-armv7l-cpython-39/flydra_core/reconstruct.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,344   copying build/lib.linux-armv7l-cpython-39/flydra_core/_fastgeom.pyx -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,346   copying build/lib.linux-armv7l-cpython-39/flydra_core/common_variables.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,348   copying build/lib.linux-armv7l-cpython-39/flydra_core/_pmat_jacobian_water.pxd -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,350   copying build/lib.linux-armv7l-cpython-39/flydra_core/_pmat_jacobian.c -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,364   copying build/lib.linux-armv7l-cpython-39/flydra_core/_Roots3And4.pxd -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,366   copying build/lib.linux-armv7l-cpython-39/flydra_core/_pmat_jacobian_water.pyx -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,368   copying build/lib.linux-armv7l-cpython-39/flydra_core/_Roots3And4.pyx -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,370   copying build/lib.linux-armv7l-cpython-39/flydra_core/_reconstruct_utils.c -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,392   copying build/lib.linux-armv7l-cpython-39/flydra_core/_fastgeom.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,401   copying build/lib.linux-armv7l-cpython-39/flydra_core/_Roots3And4.c -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,408   copying build/lib.linux-armv7l-cpython-39/flydra_core/Roots3And4.h -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,410   copying build/lib.linux-armv7l-cpython-39/flydra_core/_pmat_jacobian.pxd -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,412   copying build/lib.linux-armv7l-cpython-39/flydra_core/__init__.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,414   copying build/lib.linux-armv7l-cpython-39/flydra_core/undistort.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,416   copying build/lib.linux-armv7l-cpython-39/flydra_core/_mahalanobis.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,423   copying build/lib.linux-armv7l-cpython-39/flydra_core/_mahalanobis.c -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,430   copying build/lib.linux-armv7l-cpython-39/flydra_core/align.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,432   copying build/lib.linux-armv7l-cpython-39/flydra_core/version.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,433   copying build/lib.linux-armv7l-cpython-39/flydra_core/water.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,435   copying build/lib.linux-armv7l-cpython-39/flydra_core/_mahalanobis.pyx -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,436   copying build/lib.linux-armv7l-cpython-39/flydra_core/_refraction.pyx -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,438   copying build/lib.linux-armv7l-cpython-39/flydra_core/flydra_server_art.png -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,441   creating build/bdist.linux-armv7l/wheel/flydra_core/kalman
2023-09-01T09:42:23,442   copying build/lib.linux-armv7l-cpython-39/flydra_core/kalman/point_prob.py -> build/bdist.linux-armv7l/wheel/flydra_core/kalman
2023-09-01T09:42:23,444   copying build/lib.linux-armv7l-cpython-39/flydra_core/kalman/lsprofcalltree.py -> build/bdist.linux-armv7l/wheel/flydra_core/kalman
2023-09-01T09:42:23,445   copying build/lib.linux-armv7l-cpython-39/flydra_core/kalman/ekf.py -> build/bdist.linux-armv7l/wheel/flydra_core/kalman
2023-09-01T09:42:23,447   copying build/lib.linux-armv7l-cpython-39/flydra_core/kalman/ori_smooth.py -> build/bdist.linux-armv7l/wheel/flydra_core/kalman
2023-09-01T09:42:23,449   copying build/lib.linux-armv7l-cpython-39/flydra_core/kalman/dynamic_models.py -> build/bdist.linux-armv7l/wheel/flydra_core/kalman
2023-09-01T09:42:23,451   copying build/lib.linux-armv7l-cpython-39/flydra_core/kalman/__init__.py -> build/bdist.linux-armv7l/wheel/flydra_core/kalman
2023-09-01T09:42:23,452   copying build/lib.linux-armv7l-cpython-39/flydra_core/kalman/flydra_kalman_utils.py -> build/bdist.linux-armv7l/wheel/flydra_core/kalman
2023-09-01T09:42:23,455   copying build/lib.linux-armv7l-cpython-39/flydra_core/kalman/flydra_tracker.py -> build/bdist.linux-armv7l/wheel/flydra_core/kalman
2023-09-01T09:42:23,457   copying build/lib.linux-armv7l-cpython-39/flydra_core/_fastgeom.pxd -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,459   copying build/lib.linux-armv7l-cpython-39/flydra_core/_pmat_jacobian.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,467   copying build/lib.linux-armv7l-cpython-39/flydra_core/_pmat_jacobian_water.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,481   copying build/lib.linux-armv7l-cpython-39/flydra_core/_mahalanobis.pxd -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,482   copying build/lib.linux-armv7l-cpython-39/flydra_core/_reconstruct_utils.pyx -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,485   copying build/lib.linux-armv7l-cpython-39/flydra_core/_flydra_tracked_object.c -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,528   copying build/lib.linux-armv7l-cpython-39/flydra_core/_refraction.c -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,534   copying build/lib.linux-armv7l-cpython-39/flydra_core/flydra_socket.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-01T09:42:23,536   running install_egg_info
2023-09-01T09:42:23,542   Copying flydra_core.egg-info to build/bdist.linux-armv7l/wheel/flydra_core-0.7.16-py3.9.egg-info
2023-09-01T09:42:23,553   running install_scripts
2023-09-01T09:42:23,600   creating build/bdist.linux-armv7l/wheel/flydra_core-0.7.16.dist-info/WHEEL
2023-09-01T09:42:23,603   creating '/tmp/pip-wheel-ztk7t9w2/.tmp-ca697bsw/flydra_core-0.7.16-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-09-01T09:42:23,607   adding 'flydra_core/Roots3And4.c'
2023-09-01T09:42:23,608   adding 'flydra_core/Roots3And4.h'
2023-09-01T09:42:23,635   adding 'flydra_core/_Roots3And4.c'
2023-09-01T09:42:23,693   adding 'flydra_core/_Roots3And4.cpython-39-arm-linux-gnueabihf.so'
2023-09-01T09:42:23,696   adding 'flydra_core/_Roots3And4.pxd'
2023-09-01T09:42:23,698   adding 'flydra_core/_Roots3And4.pyx'
2023-09-01T09:42:23,700   adding 'flydra_core/__init__.py'
2023-09-01T09:42:23,755   adding 'flydra_core/_fastgeom.c'
2023-09-01T09:42:23,846   adding 'flydra_core/_fastgeom.cpython-39-arm-linux-gnueabihf.so'
2023-09-01T09:42:23,850   adding 'flydra_core/_fastgeom.pxd'
2023-09-01T09:42:23,851   adding 'flydra_core/_fastgeom.pyx'
2023-09-01T09:42:23,945   adding 'flydra_core/_flydra_tracked_object.c'
2023-09-01T09:42:24,262   adding 'flydra_core/_flydra_tracked_object.cpython-39-arm-linux-gnueabihf.so'
2023-09-01T09:42:24,275   adding 'flydra_core/_flydra_tracked_object.pyx'
2023-09-01T09:42:24,307   adding 'flydra_core/_mahalanobis.c'
2023-09-01T09:42:24,375   adding 'flydra_core/_mahalanobis.cpython-39-arm-linux-gnueabihf.so'
2023-09-01T09:42:24,378   adding 'flydra_core/_mahalanobis.pxd'
2023-09-01T09:42:24,380   adding 'flydra_core/_mahalanobis.pyx'
2023-09-01T09:42:24,424   adding 'flydra_core/_pmat_jacobian.c'
2023-09-01T09:42:24,518   adding 'flydra_core/_pmat_jacobian.cpython-39-arm-linux-gnueabihf.so'
2023-09-01T09:42:24,521   adding 'flydra_core/_pmat_jacobian.pxd'
2023-09-01T09:42:24,523   adding 'flydra_core/_pmat_jacobian.pyx'
2023-09-01T09:42:24,571   adding 'flydra_core/_pmat_jacobian_water.c'
2023-09-01T09:42:24,681   adding 'flydra_core/_pmat_jacobian_water.cpython-39-arm-linux-gnueabihf.so'
2023-09-01T09:42:24,686   adding 'flydra_core/_pmat_jacobian_water.pxd'
2023-09-01T09:42:24,687   adding 'flydra_core/_pmat_jacobian_water.pyx'
2023-09-01T09:42:24,755   adding 'flydra_core/_reconstruct_utils.c'
2023-09-01T09:42:24,966   adding 'flydra_core/_reconstruct_utils.cpython-39-arm-linux-gnueabihf.so'
2023-09-01T09:42:24,975   adding 'flydra_core/_reconstruct_utils.pyx'
2023-09-01T09:42:24,998   adding 'flydra_core/_refraction.c'
2023-09-01T09:42:25,035   adding 'flydra_core/_refraction.cpython-39-arm-linux-gnueabihf.so'
2023-09-01T09:42:25,037   adding 'flydra_core/_refraction.pxd'
2023-09-01T09:42:25,038   adding 'flydra_core/_refraction.pyx'
2023-09-01T09:42:25,040   adding 'flydra_core/align.py'
2023-09-01T09:42:25,041   adding 'flydra_core/common_variables.py'
2023-09-01T09:42:25,043   adding 'flydra_core/data_descriptions.py'
2023-09-01T09:42:25,044   adding 'flydra_core/debuglock.py'
2023-09-01T09:42:25,046   adding 'flydra_core/flydra_server_art.png'
2023-09-01T09:42:25,047   adding 'flydra_core/flydra_socket.py'
2023-09-01T09:42:25,050   adding 'flydra_core/geom.py'
2023-09-01T09:42:25,059   adding 'flydra_core/reconstruct.py'
2023-09-01T09:42:25,061   adding 'flydra_core/test_refraction.py'
2023-09-01T09:42:25,063   adding 'flydra_core/undistort.py'
2023-09-01T09:42:25,064   adding 'flydra_core/version.py'
2023-09-01T09:42:25,066   adding 'flydra_core/water.py'
2023-09-01T09:42:25,067   adding 'flydra_core/kalman/__init__.py'
2023-09-01T09:42:25,070   adding 'flydra_core/kalman/dynamic_models.py'
2023-09-01T09:42:25,071   adding 'flydra_core/kalman/ekf.py'
2023-09-01T09:42:25,073   adding 'flydra_core/kalman/flydra_kalman_utils.py'
2023-09-01T09:42:25,075   adding 'flydra_core/kalman/flydra_tracker.py'
2023-09-01T09:42:25,076   adding 'flydra_core/kalman/lsprofcalltree.py'
2023-09-01T09:42:25,078   adding 'flydra_core/kalman/ori_smooth.py'
2023-09-01T09:42:25,079   adding 'flydra_core/kalman/point_prob.py'
2023-09-01T09:42:25,082   adding 'flydra_core-0.7.16.dist-info/METADATA'
2023-09-01T09:42:25,083   adding 'flydra_core-0.7.16.dist-info/WHEEL'
2023-09-01T09:42:25,084   adding 'flydra_core-0.7.16.dist-info/entry_points.txt'
2023-09-01T09:42:25,084   adding 'flydra_core-0.7.16.dist-info/top_level.txt'
2023-09-01T09:42:25,086   adding 'flydra_core-0.7.16.dist-info/RECORD'
2023-09-01T09:42:25,116   removing build/bdist.linux-armv7l/wheel
2023-09-01T09:42:25,310   Building wheel for flydra-core (pyproject.toml): finished with status 'done'
2023-09-01T09:42:25,366   Created wheel for flydra-core: filename=flydra_core-0.7.16-cp39-cp39-linux_armv7l.whl size=2513519 sha256=09152c35b510e082bb94054a0f9393ea734fb168c6d75facbebf01f0c5fa0d38
2023-09-01T09:42:25,367   Stored in directory: /tmp/pip-ephem-wheel-cache-wp3uqege/wheels/df/8c/03/74b35066502fd8a1444c1f88020e842fa28020704ad7b3bcbf
2023-09-01T09:42:25,380 Successfully built flydra-core
2023-09-01T09:42:25,449 Removed build tracker: '/tmp/pip-build-tracker-55dnz3wt'