2023-09-02T11:42:44,910 Created temporary directory: /tmp/pip-build-tracker-a3cqg73j 2023-09-02T11:42:44,911 Initialized build tracking at /tmp/pip-build-tracker-a3cqg73j 2023-09-02T11:42:44,911 Created build tracker: /tmp/pip-build-tracker-a3cqg73j 2023-09-02T11:42:44,912 Entered build tracker: /tmp/pip-build-tracker-a3cqg73j 2023-09-02T11:42:44,912 Created temporary directory: /tmp/pip-wheel-tyyfldpr 2023-09-02T11:42:44,915 Created temporary directory: /tmp/pip-ephem-wheel-cache-3_9vy7uv 2023-09-02T11:42:44,942 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-02T11:42:44,945 2 location(s) to search for versions of cwl-utils: 2023-09-02T11:42:44,945 * https://pypi.org/simple/cwl-utils/ 2023-09-02T11:42:44,945 * https://www.piwheels.org/simple/cwl-utils/ 2023-09-02T11:42:44,945 Fetching project page and analyzing links: https://pypi.org/simple/cwl-utils/ 2023-09-02T11:42:44,946 Getting page https://pypi.org/simple/cwl-utils/ 2023-09-02T11:42:44,948 Found index url https://pypi.org/simple/ 2023-09-02T11:42:44,999 Fetched page https://pypi.org/simple/cwl-utils/ as application/vnd.pypi.simple.v1+json 2023-09-02T11:42:45,009 Found link https://files.pythonhosted.org/packages/0b/d6/9e1315cdaf68c85a4d94d1aae2c1cc50af122bca762588e8ae3c297f272b/cwl-utils-0.1.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.1 2023-09-02T11:42:45,010 Found link https://files.pythonhosted.org/packages/64/ca/a591b71c37c2e9aa50766dd98c8b8c32fd51325df81086f5e60201a788c3/cwl-utils-0.2.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.2 2023-09-02T11:42:45,010 Skipping link: No binaries permitted for cwl-utils: https://files.pythonhosted.org/packages/93/5c/a7b590dcd52f551d564704cce30a5d6e9f81b6225fb12b3bf51f87c1dada/cwl_utils-0.2-py3-none-any.whl (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-09-02T11:42:45,010 Found link https://files.pythonhosted.org/packages/fa/fd/5d5509ce13a323cd4cc40c88d8bf0c3ca3ed8669f62be126d31a72d5ce56/cwl-utils-0.3.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.3 2023-09-02T11:42:45,011 Skipping link: No binaries permitted for cwl-utils: https://files.pythonhosted.org/packages/d5/04/6ed34cf37de94ee1f8e2209be56f5512f7aa886623d552ae993f0fe98702/cwl_utils-0.3-py3-none-any.whl (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-09-02T11:42:45,011 Found link https://files.pythonhosted.org/packages/45/ec/c5c1186d94467d80148c9f20f12b4d6d2914445a2f844396188750494ff9/cwl-utils-0.4.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.4 2023-09-02T11:42:45,012 Found link https://files.pythonhosted.org/packages/65/90/3ae24ff2f4bc84e24ccf3262c2990521d9ce1c12f760785329f6424c9ad1/cwl-utils-0.5.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.5 2023-09-02T11:42:45,012 Found link https://files.pythonhosted.org/packages/19/6e/c41ff3503335ffd4f90bdfc74e71e3803c1ecf9e58d8c5d26c869de6ce6c/cwl-utils-0.6.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.6 2023-09-02T11:42:45,013 Found link https://files.pythonhosted.org/packages/50/91/28fcb5e0d5377ab3db6800dde8e15c64dd629f13dff9051582f7078ca9af/cwl-utils-0.7.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.7 2023-09-02T11:42:45,014 Found link https://files.pythonhosted.org/packages/d3/68/559c19042fa610b775dcfe7ca7bc224f7d1de637598b7195ca091722772a/cwl-utils-0.8.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.8 2023-09-02T11:42:45,014 Skipping link: No binaries permitted for cwl-utils: https://files.pythonhosted.org/packages/e9/bc/2a639f5084ce9f362abbe4f13006df35e371b702bd0fa11394571223b0a3/cwl_utils-0.8-py3-none-any.whl (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-09-02T11:42:45,014 Found link https://files.pythonhosted.org/packages/9a/1f/d99d30c8bc20f664466623599492829bec26e97df95fa688a1bec49b0c50/cwl-utils-0.9.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.9 2023-09-02T11:42:45,015 Skipping link: No binaries permitted for cwl-utils: https://files.pythonhosted.org/packages/91/c6/a26a1abbbb0333bb114f8ceaab2993888427c1b1efc300980e96d47397b8/cwl_utils-0.9-py3-none-any.whl (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-09-02T11:42:45,015 Found link https://files.pythonhosted.org/packages/44/a1/ad2fc39415e0a34381e5fe82222726c50925525b62bea0c1d48789e7f764/cwl-utils-0.10.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.10 2023-09-02T11:42:45,015 Skipping link: No binaries permitted for cwl-utils: https://files.pythonhosted.org/packages/92/ac/0e13d55c8cd91005b277b37715db1be7df4f2566da448d867e4c47ba2f0c/cwl_utils-0.10-py3-none-any.whl (from 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Skipping link: No binaries permitted for cwl-utils: https://files.pythonhosted.org/packages/c3/c2/34d1577c9a6b2d77456f02275facf28238468d8b3fac6e576e56aaa040e2/cwl_utils-0.14-py3-none-any.whl (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-09-02T11:42:45,019 Found link https://files.pythonhosted.org/packages/d3/34/0c0e4c4fa7bdc2888357b14ed613cd3c5dd3abcd84c02b297ba934991466/cwl-utils-0.15.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.15 2023-09-02T11:42:45,019 Skipping link: No binaries permitted for cwl-utils: https://files.pythonhosted.org/packages/85/8f/a3d0db1aabfd1a733149f90cdba6927299feaa16023f8e8c59b4ed8de104/cwl_utils-0.15-py3-none-any.whl (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-09-02T11:42:45,020 Found link https://files.pythonhosted.org/packages/b6/e3/f53eb41bc3350a4cb55911d054e14af24b43117196e4cfcea7b5daae5f48/cwl-utils-0.16.tar.gz (from https://pypi.org/simple/cwl-utils/) 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https://www.piwheels.org/simple/cwl-utils/cwl_utils-0.4-py3-none-any.whl#sha256=41c00592aaf0e80d3f312de81e1d60d9858fb128a45a2743bb58c7f8291398d1 (from https://www.piwheels.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-09-02T11:42:45,208 Skipping link: No binaries permitted for cwl-utils: https://www.piwheels.org/simple/cwl-utils/cwl_utils-0.3-py3-none-any.whl#sha256=64e0e094726c13419a2b0b7a1e82b8d93b3f4142625c3c4ac90c8f73b4374146 (from https://www.piwheels.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-09-02T11:42:45,208 Skipping link: No binaries permitted for cwl-utils: https://www.piwheels.org/simple/cwl-utils/cwl_utils-0.2-py3-none-any.whl#sha256=50d2590f63f89085c48eeccf5de1278700f73f25b2fcd9b3405feb38b4e5bcff (from https://www.piwheels.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-09-02T11:42:45,209 Skipping link: No binaries permitted for cwl-utils: https://www.piwheels.org/simple/cwl-utils/cwl_utils-0.1-py3-none-any.whl#sha256=033e34d4ce8ef5c9b9fa5f5b8fbc9a5f79faec2821bac352829a8ed95c7bca9c (from https://www.piwheels.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-09-02T11:42:45,209 Skipping link: not a file: https://www.piwheels.org/simple/cwl-utils/ 2023-09-02T11:42:45,209 Skipping link: not a file: https://pypi.org/simple/cwl-utils/ 2023-09-02T11:42:45,230 Given no hashes to check 1 links for project 'cwl-utils': discarding no candidates 2023-09-02T11:42:45,247 Collecting cwl-utils==0.29 2023-09-02T11:42:45,249 Created temporary directory: /tmp/pip-unpack-6m79xcna 2023-09-02T11:42:45,370 Downloading cwl-utils-0.29.tar.gz (259 kB) 2023-09-02T11:42:45,807 Added cwl-utils==0.29 from https://files.pythonhosted.org/packages/51/f1/fc3732b54b270a0e67d57e374a8f2d2494351040ccdc11a9bf978eee971c/cwl-utils-0.29.tar.gz to build tracker '/tmp/pip-build-tracker-a3cqg73j' 2023-09-02T11:42:45,809 Running setup.py (path:/tmp/pip-wheel-tyyfldpr/cwl-utils_e9502f42e61c457a9388d9154931257c/setup.py) egg_info for package cwl-utils 2023-09-02T11:42:45,810 Created temporary directory: /tmp/pip-pip-egg-info-tla0ivao 2023-09-02T11:42:45,810 Preparing metadata (setup.py): started 2023-09-02T11:42:45,811 Running command python setup.py egg_info 2023-09-02T11:42:46,493 running egg_info 2023-09-02T11:42:46,494 creating /tmp/pip-pip-egg-info-tla0ivao/cwl_utils.egg-info 2023-09-02T11:42:46,521 writing /tmp/pip-pip-egg-info-tla0ivao/cwl_utils.egg-info/PKG-INFO 2023-09-02T11:42:46,523 writing dependency_links to /tmp/pip-pip-egg-info-tla0ivao/cwl_utils.egg-info/dependency_links.txt 2023-09-02T11:42:46,525 writing entry points to /tmp/pip-pip-egg-info-tla0ivao/cwl_utils.egg-info/entry_points.txt 2023-09-02T11:42:46,527 writing requirements to /tmp/pip-pip-egg-info-tla0ivao/cwl_utils.egg-info/requires.txt 2023-09-02T11:42:46,528 writing top-level names to /tmp/pip-pip-egg-info-tla0ivao/cwl_utils.egg-info/top_level.txt 2023-09-02T11:42:46,529 writing manifest file '/tmp/pip-pip-egg-info-tla0ivao/cwl_utils.egg-info/SOURCES.txt' 2023-09-02T11:42:46,616 reading manifest file '/tmp/pip-pip-egg-info-tla0ivao/cwl_utils.egg-info/SOURCES.txt' 2023-09-02T11:42:46,617 reading manifest template 'MANIFEST.in' 2023-09-02T11:42:46,619 warning: no files found matching 'LICENSE.txt' 2023-09-02T11:42:46,624 warning: no files found matching 'testdata/*.yaml' 2023-09-02T11:42:46,633 warning: no previously-included files matching '*~' found anywhere in distribution 2023-09-02T11:42:46,634 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-09-02T11:42:46,642 writing manifest file '/tmp/pip-pip-egg-info-tla0ivao/cwl_utils.egg-info/SOURCES.txt' 2023-09-02T11:42:46,702 Preparing metadata (setup.py): finished with status 'done' 2023-09-02T11:42:46,708 Source in /tmp/pip-wheel-tyyfldpr/cwl-utils_e9502f42e61c457a9388d9154931257c has version 0.29, which satisfies requirement cwl-utils==0.29 from https://files.pythonhosted.org/packages/51/f1/fc3732b54b270a0e67d57e374a8f2d2494351040ccdc11a9bf978eee971c/cwl-utils-0.29.tar.gz 2023-09-02T11:42:46,709 Removed cwl-utils==0.29 from https://files.pythonhosted.org/packages/51/f1/fc3732b54b270a0e67d57e374a8f2d2494351040ccdc11a9bf978eee971c/cwl-utils-0.29.tar.gz from build tracker '/tmp/pip-build-tracker-a3cqg73j' 2023-09-02T11:42:46,716 Created temporary directory: /tmp/pip-unpack-k6nn2x2n 2023-09-02T11:42:46,716 Building wheels for collected packages: cwl-utils 2023-09-02T11:42:46,721 Created temporary directory: /tmp/pip-wheel-q57wmwe6 2023-09-02T11:42:46,721 Building wheel for cwl-utils (setup.py): started 2023-09-02T11:42:46,722 Destination directory: /tmp/pip-wheel-q57wmwe6 2023-09-02T11:42:46,722 Running command python setup.py bdist_wheel 2023-09-02T11:42:47,386 running bdist_wheel 2023-09-02T11:42:47,671 running build 2023-09-02T11:42:47,671 running build_py 2023-09-02T11:42:47,701 creating build 2023-09-02T11:42:47,701 creating build/lib 2023-09-02T11:42:47,702 creating build/lib/cwl_utils 2023-09-02T11:42:47,703 copying cwl_utils/cwl_v1_2_expression_refactor.py -> build/lib/cwl_utils 2023-09-02T11:42:47,707 copying cwl_utils/docker_extract.py -> build/lib/cwl_utils 2023-09-02T11:42:47,709 copying cwl_utils/singularity.py -> build/lib/cwl_utils 2023-09-02T11:42:47,711 copying cwl_utils/cwl_v1_0_expression_refactor.py -> build/lib/cwl_utils 2023-09-02T11:42:47,714 copying cwl_utils/utils.py -> build/lib/cwl_utils 2023-09-02T11:42:47,717 copying cwl_utils/expression.py -> build/lib/cwl_utils 2023-09-02T11:42:47,719 copying cwl_utils/schemadef.py -> build/lib/cwl_utils 2023-09-02T11:42:47,721 copying cwl_utils/file_formats.py -> build/lib/cwl_utils 2023-09-02T11:42:47,722 copying cwl_utils/expression_refactor.py -> build/lib/cwl_utils 2023-09-02T11:42:47,725 copying cwl_utils/pack.py -> build/lib/cwl_utils 2023-09-02T11:42:47,727 copying cwl_utils/errors.py -> build/lib/cwl_utils 2023-09-02T11:42:47,728 copying cwl_utils/__init__.py -> build/lib/cwl_utils 2023-09-02T11:42:47,730 copying cwl_utils/types.py -> build/lib/cwl_utils 2023-09-02T11:42:47,732 copying cwl_utils/loghandler.py -> build/lib/cwl_utils 2023-09-02T11:42:47,733 copying cwl_utils/__meta__.py -> build/lib/cwl_utils 2023-09-02T11:42:47,735 copying cwl_utils/normalizer.py -> build/lib/cwl_utils 2023-09-02T11:42:47,737 copying cwl_utils/cwl_v1_1_expression_refactor.py -> build/lib/cwl_utils 2023-09-02T11:42:47,740 copying cwl_utils/graph_split.py -> build/lib/cwl_utils 2023-09-02T11:42:47,743 copying cwl_utils/image_puller.py -> build/lib/cwl_utils 2023-09-02T11:42:47,745 copying cwl_utils/sandboxjs.py -> build/lib/cwl_utils 2023-09-02T11:42:47,747 copying cwl_utils/cite_extract.py -> build/lib/cwl_utils 2023-09-02T11:42:47,749 creating build/lib/cwl_utils/parser 2023-09-02T11:42:47,750 copying cwl_utils/parser/cwl_v1_2.py -> build/lib/cwl_utils/parser 2023-09-02T11:42:47,762 copying cwl_utils/parser/cwl_v1_1.py -> build/lib/cwl_utils/parser 2023-09-02T11:42:47,772 copying cwl_utils/parser/cwl_v1_0.py -> build/lib/cwl_utils/parser 2023-09-02T11:42:47,782 copying cwl_utils/parser/cwl_v1_1_utils.py -> build/lib/cwl_utils/parser 2023-09-02T11:42:47,784 copying cwl_utils/parser/utils.py -> build/lib/cwl_utils/parser 2023-09-02T11:42:47,786 copying cwl_utils/parser/__init__.py -> build/lib/cwl_utils/parser 2023-09-02T11:42:47,788 copying cwl_utils/parser/cwl_v1_0_utils.py -> build/lib/cwl_utils/parser 2023-09-02T11:42:47,791 copying cwl_utils/parser/cwl_v1_2_utils.py -> build/lib/cwl_utils/parser 2023-09-02T11:42:47,793 copying cwl_utils/parser/latest.py -> build/lib/cwl_utils/parser 2023-09-02T11:42:47,796 creating build/lib/cwl_utils/tests 2023-09-02T11:42:47,797 copying tests/load_cwl_by_path.py -> build/lib/cwl_utils/tests 2023-09-02T11:42:47,799 copying tests/test_js_sandbox.py -> build/lib/cwl_utils/tests 2023-09-02T11:42:47,801 copying tests/test_docker_extract.py -> build/lib/cwl_utils/tests 2023-09-02T11:42:47,803 copying tests/test_format.py -> build/lib/cwl_utils/tests 2023-09-02T11:42:47,805 copying tests/util.py -> build/lib/cwl_utils/tests 2023-09-02T11:42:47,806 copying tests/test_etools_to_clt.py -> build/lib/cwl_utils/tests 2023-09-02T11:42:47,808 copying tests/test_graph_split.py -> build/lib/cwl_utils/tests 2023-09-02T11:42:47,810 copying tests/test_examples.py -> build/lib/cwl_utils/tests 2023-09-02T11:42:47,812 copying tests/__init__.py -> build/lib/cwl_utils/tests 2023-09-02T11:42:47,813 copying tests/test_parser_utils.py -> build/lib/cwl_utils/tests 2023-09-02T11:42:47,816 copying tests/test_subscope.py -> build/lib/cwl_utils/tests 2023-09-02T11:42:47,818 copying tests/test_meta.py -> build/lib/cwl_utils/tests 2023-09-02T11:42:47,820 copying tests/test_cite_extract.py -> build/lib/cwl_utils/tests 2023-09-02T11:42:47,821 copying tests/test_parser.py -> build/lib/cwl_utils/tests 2023-09-02T11:42:47,823 copying tests/test_utils.py -> build/lib/cwl_utils/tests 2023-09-02T11:42:47,825 copying tests/test_packing.py -> build/lib/cwl_utils/tests 2023-09-02T11:42:47,827 running egg_info 2023-09-02T11:42:47,888 writing cwl_utils.egg-info/PKG-INFO 2023-09-02T11:42:47,890 writing dependency_links to cwl_utils.egg-info/dependency_links.txt 2023-09-02T11:42:47,893 writing entry points to cwl_utils.egg-info/entry_points.txt 2023-09-02T11:42:47,894 writing requirements to cwl_utils.egg-info/requires.txt 2023-09-02T11:42:47,895 writing top-level names to cwl_utils.egg-info/top_level.txt 2023-09-02T11:42:47,928 reading manifest file 'cwl_utils.egg-info/SOURCES.txt' 2023-09-02T11:42:47,933 reading manifest template 'MANIFEST.in' 2023-09-02T11:42:47,934 warning: no files found matching 'LICENSE.txt' 2023-09-02T11:42:47,940 warning: no files found matching 'testdata/*.yaml' 2023-09-02T11:42:47,948 warning: no previously-included files matching '*~' found anywhere in distribution 2023-09-02T11:42:47,949 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-09-02T11:42:47,959 writing manifest file 'cwl_utils.egg-info/SOURCES.txt' 2023-09-02T11:42:47,964 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'cwl_utils.testdata.checker_wf' is absent from the `packages` configuration. 2023-09-02T11:42:47,964 !! 2023-09-02T11:42:47,965 ******************************************************************************** 2023-09-02T11:42:47,965 ############################ 2023-09-02T11:42:47,965 # Package would be ignored # 2023-09-02T11:42:47,965 ############################ 2023-09-02T11:42:47,965 Python recognizes 'cwl_utils.testdata.checker_wf' as an importable package[^1], 2023-09-02T11:42:47,965 but it is absent from setuptools' `packages` configuration. 2023-09-02T11:42:47,965 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-02T11:42:47,966 package, please make sure that 'cwl_utils.testdata.checker_wf' is explicitly added 2023-09-02T11:42:47,966 to the `packages` configuration field. 2023-09-02T11:42:47,966 Alternatively, you can also rely on setuptools' discovery methods 2023-09-02T11:42:47,966 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-02T11:42:47,966 instead of `find_packages(...)`/`find:`). 2023-09-02T11:42:47,966 You can read more about "package discovery" on setuptools documentation page: 2023-09-02T11:42:47,967 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-02T11:42:47,967 If you don't want 'cwl_utils.testdata.checker_wf' to be distributed and are 2023-09-02T11:42:47,967 already explicitly excluding 'cwl_utils.testdata.checker_wf' via 2023-09-02T11:42:47,967 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-02T11:42:47,967 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-02T11:42:47,967 combination with a more fine grained `package-data` configuration. 2023-09-02T11:42:47,967 You can read more about "package data files" on setuptools documentation page: 2023-09-02T11:42:47,968 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-02T11:42:47,968 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-02T11:42:47,968 even if it does not contain any `.py` files. 2023-09-02T11:42:47,968 On the other hand, currently there is no concept of package data 2023-09-02T11:42:47,968 directory, all directories are treated like packages. 2023-09-02T11:42:47,968 ******************************************************************************** 2023-09-02T11:42:47,969 !! 2023-09-02T11:42:47,969 check.warn(importable) 2023-09-02T11:42:47,969 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'cwl_utils.testdata.types' is absent from the `packages` configuration. 2023-09-02T11:42:47,969 !! 2023-09-02T11:42:47,969 ******************************************************************************** 2023-09-02T11:42:47,969 ############################ 2023-09-02T11:42:47,969 # Package would be ignored # 2023-09-02T11:42:47,970 ############################ 2023-09-02T11:42:47,970 Python recognizes 'cwl_utils.testdata.types' as an importable package[^1], 2023-09-02T11:42:47,970 but it is absent from setuptools' `packages` configuration. 2023-09-02T11:42:47,970 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-02T11:42:47,970 package, please make sure that 'cwl_utils.testdata.types' is explicitly added 2023-09-02T11:42:47,970 to the `packages` configuration field. 2023-09-02T11:42:47,970 Alternatively, you can also rely on setuptools' discovery methods 2023-09-02T11:42:47,971 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-02T11:42:47,971 instead of `find_packages(...)`/`find:`). 2023-09-02T11:42:47,971 You can read more about "package discovery" on setuptools documentation page: 2023-09-02T11:42:47,971 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-02T11:42:47,971 If you don't want 'cwl_utils.testdata.types' to be distributed and are 2023-09-02T11:42:47,972 already explicitly excluding 'cwl_utils.testdata.types' via 2023-09-02T11:42:47,972 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-02T11:42:47,972 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-02T11:42:47,972 combination with a more fine grained `package-data` configuration. 2023-09-02T11:42:47,972 You can read more about "package data files" on setuptools documentation page: 2023-09-02T11:42:47,972 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-02T11:42:47,973 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-02T11:42:47,973 even if it does not contain any `.py` files. 2023-09-02T11:42:47,973 On the other hand, currently there is no concept of package data 2023-09-02T11:42:47,973 directory, all directories are treated like packages. 2023-09-02T11:42:47,973 ******************************************************************************** 2023-09-02T11:42:47,973 !! 2023-09-02T11:42:47,973 check.warn(importable) 2023-09-02T11:42:47,974 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'cwl_utils.testdata.workflows' is absent from the `packages` configuration. 2023-09-02T11:42:47,974 !! 2023-09-02T11:42:47,974 ******************************************************************************** 2023-09-02T11:42:47,974 ############################ 2023-09-02T11:42:47,974 # Package would be ignored # 2023-09-02T11:42:47,974 ############################ 2023-09-02T11:42:47,974 Python recognizes 'cwl_utils.testdata.workflows' as an importable package[^1], 2023-09-02T11:42:47,974 but it is absent from setuptools' `packages` configuration. 2023-09-02T11:42:47,975 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-02T11:42:47,975 package, please make sure that 'cwl_utils.testdata.workflows' is explicitly added 2023-09-02T11:42:47,975 to the `packages` configuration field. 2023-09-02T11:42:47,975 Alternatively, you can also rely on setuptools' discovery methods 2023-09-02T11:42:47,975 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-02T11:42:47,975 instead of `find_packages(...)`/`find:`). 2023-09-02T11:42:47,976 You can read more about "package discovery" on setuptools documentation page: 2023-09-02T11:42:47,976 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-02T11:42:47,976 If you don't want 'cwl_utils.testdata.workflows' to be distributed and are 2023-09-02T11:42:47,976 already explicitly excluding 'cwl_utils.testdata.workflows' via 2023-09-02T11:42:47,976 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-02T11:42:47,977 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-02T11:42:47,977 combination with a more fine grained `package-data` configuration. 2023-09-02T11:42:47,977 You can read more about "package data files" on setuptools documentation page: 2023-09-02T11:42:47,977 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-02T11:42:47,978 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-02T11:42:47,978 even if it does not contain any `.py` files. 2023-09-02T11:42:47,978 On the other hand, currently there is no concept of package data 2023-09-02T11:42:47,978 directory, all directories are treated like packages. 2023-09-02T11:42:47,978 ******************************************************************************** 2023-09-02T11:42:47,978 !! 2023-09-02T11:42:47,978 check.warn(importable) 2023-09-02T11:42:47,979 copying cwl_utils/cwlNodeEngine.js -> build/lib/cwl_utils 2023-09-02T11:42:47,979 copying cwl_utils/cwlNodeEngineJSConsole.js -> build/lib/cwl_utils 2023-09-02T11:42:47,979 copying cwl_utils/cwlNodeEngineWithContext.js -> build/lib/cwl_utils 2023-09-02T11:42:47,981 copying cwl_utils/py.typed -> build/lib/cwl_utils 2023-09-02T11:42:47,983 creating build/lib/cwl_utils/testdata 2023-09-02T11:42:47,984 copying testdata/EDAM_subset.owl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:47,987 copying testdata/cond-single-source-wf-003.1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:47,989 copying testdata/cond-single-source-wf-004.1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:47,991 copying testdata/cond-single-source-wf-005.1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:47,993 copying testdata/cond-wf-003.1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:47,995 copying testdata/cond-wf-004.1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:47,997 copying testdata/cond-wf-005.1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:47,999 copying testdata/count-lines6-single-source-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,001 copying testdata/count-lines6-single-source-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,003 copying testdata/count-lines6-single-source-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,005 copying testdata/count-lines6-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,007 copying testdata/count-lines6-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,009 copying testdata/count-lines6-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,011 copying testdata/count-lines7-single-source-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,013 copying testdata/count-lines7-single-source-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,015 copying testdata/count-lines7-single-source-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,017 copying testdata/count-lines7-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,019 copying testdata/count-lines7-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,021 copying testdata/count-lines7-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,023 copying testdata/debian_image_id.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,025 copying testdata/dockstore-tool-md5sum.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,027 copying testdata/dockstore-tool-md5sum_v11.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,029 copying testdata/dockstore-tool-md5sum_v12.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,032 copying testdata/echo-tool-packed.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,034 copying testdata/echo_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,036 copying testdata/echo_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,037 copying testdata/echo_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,039 copying testdata/foo-array.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,042 copying testdata/foo.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,044 copying testdata/formattest2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,045 copying testdata/formattest2_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,047 copying testdata/formattest2_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,049 copying testdata/gx_edam.ttl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,052 copying testdata/js-expr-req-wf.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,054 copying testdata/lib.js -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,056 copying testdata/md5sum.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,058 copying testdata/md5sum.input -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,060 copying testdata/md5sum_v11.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,062 copying testdata/md5sum_v12.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,064 copying testdata/record-output-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,066 copying testdata/record-output-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,068 copying testdata/record-output-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,070 copying testdata/record-output_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,072 copying testdata/record-output_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,074 copying testdata/record-output_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,076 copying testdata/scatter-wf1_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,078 copying testdata/scatter-wf1_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,080 copying testdata/scatter-wf1_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,082 copying testdata/scatter-wf2_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,084 copying testdata/scatter-wf2_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,086 copying testdata/scatter-wf2_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,088 copying testdata/scatter-wf3_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,090 copying testdata/scatter-wf3_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,092 copying testdata/scatter-wf3_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,094 copying testdata/seqtk_seq.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,096 copying testdata/stdout-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,098 copying testdata/stdout-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,100 copying testdata/stdout-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,102 copying testdata/step-valuefrom2-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,104 copying testdata/step-valuefrom2-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,106 copying testdata/step-valuefrom2-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,108 copying testdata/step-valuefrom3-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,110 copying testdata/step-valuefrom3-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,112 copying testdata/step-valuefrom3-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,114 copying testdata/step_valuefrom5_wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,116 copying testdata/step_valuefrom5_wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,118 copying testdata/step_valuefrom5_wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,120 copying testdata/step_valuefrom5_wf_with_id_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,122 copying testdata/step_valuefrom5_wf_with_id_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,124 copying testdata/step_valuefrom5_wf_with_id_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,126 copying testdata/wc3-tool_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,128 copying testdata/wc3-tool_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,130 copying testdata/wc3-tool_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,132 copying testdata/wf2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,135 copying testdata/workflow_input_format_expr.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,137 copying testdata/workflow_input_format_expr_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,139 copying testdata/workflow_input_format_expr_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,141 copying testdata/workflow_input_sf_expr.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,143 copying testdata/workflow_input_sf_expr_array.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,145 copying testdata/workflow_input_sf_expr_array_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,147 copying testdata/workflow_input_sf_expr_array_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,149 copying testdata/workflow_input_sf_expr_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,151 copying testdata/workflow_input_sf_expr_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-09-02T11:42:48,153 creating build/lib/cwl_utils/testdata/checker_wf 2023-09-02T11:42:48,153 copying testdata/checker_wf/broken-wf.cwl -> build/lib/cwl_utils/testdata/checker_wf 2023-09-02T11:42:48,156 copying testdata/checker_wf/broken-wf2.cwl -> build/lib/cwl_utils/testdata/checker_wf 2023-09-02T11:42:48,157 copying testdata/checker_wf/broken-wf3.cwl -> build/lib/cwl_utils/testdata/checker_wf 2023-09-02T11:42:48,159 copying testdata/checker_wf/cat.cwl -> build/lib/cwl_utils/testdata/checker_wf 2023-09-02T11:42:48,161 copying testdata/checker_wf/echo.cwl -> build/lib/cwl_utils/testdata/checker_wf 2023-09-02T11:42:48,164 copying testdata/checker_wf/functional-wf.cwl -> build/lib/cwl_utils/testdata/checker_wf 2023-09-02T11:42:48,166 creating build/lib/cwl_utils/testdata/remote-cwl 2023-09-02T11:42:48,166 copying testdata/remote-cwl/tool1.cwl -> build/lib/cwl_utils/testdata/remote-cwl 2023-09-02T11:42:48,169 copying testdata/remote-cwl/tool2.cwl -> build/lib/cwl_utils/testdata/remote-cwl 2023-09-02T11:42:48,171 copying testdata/remote-cwl/wf1.cwl -> build/lib/cwl_utils/testdata/remote-cwl 2023-09-02T11:42:48,173 creating build/lib/cwl_utils/testdata/types 2023-09-02T11:42:48,174 copying testdata/types/array.yml -> build/lib/cwl_utils/testdata/types 2023-09-02T11:42:48,176 copying testdata/types/recursive.yml -> build/lib/cwl_utils/testdata/types 2023-09-02T11:42:48,178 copying testdata/types/singletype.yml -> build/lib/cwl_utils/testdata/types 2023-09-02T11:42:48,180 copying testdata/types/singletype2.yml -> build/lib/cwl_utils/testdata/types 2023-09-02T11:42:48,182 copying testdata/types/testtypes.yml -> build/lib/cwl_utils/testdata/types 2023-09-02T11:42:48,184 creating build/lib/cwl_utils/testdata/workflows 2023-09-02T11:42:48,185 copying testdata/workflows/count-lines16-wf.cwl -> build/lib/cwl_utils/testdata/workflows 2023-09-02T11:42:48,187 copying testdata/workflows/import-in-type.cwl -> build/lib/cwl_utils/testdata/workflows 2023-09-02T11:42:48,189 copying testdata/workflows/parseInt-tool.cwl -> build/lib/cwl_utils/testdata/workflows 2023-09-02T11:42:48,191 copying testdata/workflows/scatter-wf4.cwl -> build/lib/cwl_utils/testdata/workflows 2023-09-02T11:42:48,193 copying testdata/workflows/type-import.yaml -> build/lib/cwl_utils/testdata/workflows 2023-09-02T11:42:48,195 copying testdata/workflows/wc-tool.cwl -> build/lib/cwl_utils/testdata/workflows 2023-09-02T11:42:48,197 copying testdata/workflows/wf5.cwl -> build/lib/cwl_utils/testdata/workflows 2023-09-02T11:42:48,233 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-09-02T11:42:48,234 !! 2023-09-02T11:42:48,234 ******************************************************************************** 2023-09-02T11:42:48,234 Please avoid running ``setup.py`` directly. 2023-09-02T11:42:48,234 Instead, use pypa/build, pypa/installer, pypa/build or 2023-09-02T11:42:48,234 other standards-based tools. 2023-09-02T11:42:48,235 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-09-02T11:42:48,235 ******************************************************************************** 2023-09-02T11:42:48,235 !! 2023-09-02T11:42:48,235 self.initialize_options() 2023-09-02T11:42:48,261 installing to build/bdist.linux-armv7l/wheel 2023-09-02T11:42:48,261 running install 2023-09-02T11:42:48,286 running install_lib 2023-09-02T11:42:48,314 creating build/bdist.linux-armv7l 2023-09-02T11:42:48,314 creating build/bdist.linux-armv7l/wheel 2023-09-02T11:42:48,316 creating build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,317 copying build/lib/cwl_utils/cwl_v1_2_expression_refactor.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,321 copying build/lib/cwl_utils/docker_extract.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,324 copying build/lib/cwl_utils/singularity.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,325 copying build/lib/cwl_utils/py.typed -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,327 copying build/lib/cwl_utils/cwlNodeEngineWithContext.js -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,329 copying build/lib/cwl_utils/cwl_v1_0_expression_refactor.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,333 copying build/lib/cwl_utils/utils.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,335 copying build/lib/cwl_utils/expression.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,337 copying build/lib/cwl_utils/schemadef.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,340 copying build/lib/cwl_utils/cwlNodeEngine.js -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,341 copying build/lib/cwl_utils/file_formats.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,343 copying build/lib/cwl_utils/cwlNodeEngineJSConsole.js -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,346 creating build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-09-02T11:42:48,347 copying build/lib/cwl_utils/parser/cwl_v1_2.py -> build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-09-02T11:42:48,363 copying build/lib/cwl_utils/parser/cwl_v1_1.py -> build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-09-02T11:42:48,378 copying build/lib/cwl_utils/parser/cwl_v1_0.py -> build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-09-02T11:42:48,391 copying build/lib/cwl_utils/parser/cwl_v1_1_utils.py -> build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-09-02T11:42:48,394 copying build/lib/cwl_utils/parser/utils.py -> build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-09-02T11:42:48,396 copying build/lib/cwl_utils/parser/__init__.py -> build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-09-02T11:42:48,398 copying build/lib/cwl_utils/parser/cwl_v1_0_utils.py -> build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-09-02T11:42:48,401 copying build/lib/cwl_utils/parser/cwl_v1_2_utils.py -> build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-09-02T11:42:48,404 copying build/lib/cwl_utils/parser/latest.py -> build/bdist.linux-armv7l/wheel/cwl_utils/parser 2023-09-02T11:42:48,405 copying build/lib/cwl_utils/expression_refactor.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,407 copying build/lib/cwl_utils/pack.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,410 copying build/lib/cwl_utils/errors.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,413 creating build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,414 copying build/lib/cwl_utils/testdata/scatter-wf2_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,416 copying build/lib/cwl_utils/testdata/step-valuefrom3-wf_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,418 copying build/lib/cwl_utils/testdata/workflow_input_format_expr.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,419 copying build/lib/cwl_utils/testdata/gx_edam.ttl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,421 copying build/lib/cwl_utils/testdata/echo_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,423 copying build/lib/cwl_utils/testdata/count-lines6-single-source-wf_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,424 copying build/lib/cwl_utils/testdata/step_valuefrom5_wf_with_id_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,426 copying build/lib/cwl_utils/testdata/md5sum_v12.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,428 copying build/lib/cwl_utils/testdata/record-output-wf_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,429 copying build/lib/cwl_utils/testdata/wc3-tool_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,431 copying build/lib/cwl_utils/testdata/count-lines7-wf_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,433 copying build/lib/cwl_utils/testdata/step_valuefrom5_wf_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,434 copying build/lib/cwl_utils/testdata/foo.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,436 copying build/lib/cwl_utils/testdata/step-valuefrom3-wf_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,438 copying build/lib/cwl_utils/testdata/scatter-wf1_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,439 copying build/lib/cwl_utils/testdata/workflow_input_sf_expr_array_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,441 copying build/lib/cwl_utils/testdata/count-lines6-single-source-wf_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,443 copying build/lib/cwl_utils/testdata/dockstore-tool-md5sum_v12.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,444 copying build/lib/cwl_utils/testdata/count-lines7-single-source-wf_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,446 copying build/lib/cwl_utils/testdata/wc3-tool_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,448 copying build/lib/cwl_utils/testdata/echo_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,449 copying build/lib/cwl_utils/testdata/formattest2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,451 copying build/lib/cwl_utils/testdata/scatter-wf3_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,453 copying build/lib/cwl_utils/testdata/md5sum.input -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,454 copying build/lib/cwl_utils/testdata/cond-single-source-wf-004.1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,456 copying build/lib/cwl_utils/testdata/workflow_input_sf_expr_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,457 copying build/lib/cwl_utils/testdata/scatter-wf2_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,459 copying build/lib/cwl_utils/testdata/wc3-tool_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,461 copying build/lib/cwl_utils/testdata/count-lines7-wf_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,462 copying build/lib/cwl_utils/testdata/step-valuefrom2-wf_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,464 copying build/lib/cwl_utils/testdata/record-output-wf_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,465 copying build/lib/cwl_utils/testdata/step_valuefrom5_wf_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,467 copying build/lib/cwl_utils/testdata/lib.js -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,469 copying build/lib/cwl_utils/testdata/count-lines7-single-source-wf_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,470 copying build/lib/cwl_utils/testdata/step-valuefrom3-wf_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,472 copying build/lib/cwl_utils/testdata/echo-tool-packed.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,474 copying build/lib/cwl_utils/testdata/formattest2_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,475 copying build/lib/cwl_utils/testdata/workflow_input_sf_expr_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,477 copying build/lib/cwl_utils/testdata/debian_image_id.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,479 copying build/lib/cwl_utils/testdata/step_valuefrom5_wf_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,480 copying build/lib/cwl_utils/testdata/count-lines6-wf_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,482 copying build/lib/cwl_utils/testdata/workflow_input_format_expr_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,484 copying build/lib/cwl_utils/testdata/scatter-wf1_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,485 copying build/lib/cwl_utils/testdata/step-valuefrom2-wf_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,487 copying build/lib/cwl_utils/testdata/wf2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,489 copying build/lib/cwl_utils/testdata/count-lines7-single-source-wf_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,490 copying build/lib/cwl_utils/testdata/record-output_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,492 copying build/lib/cwl_utils/testdata/cond-single-source-wf-003.1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,494 copying build/lib/cwl_utils/testdata/step_valuefrom5_wf_with_id_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,496 creating build/bdist.linux-armv7l/wheel/cwl_utils/testdata/remote-cwl 2023-09-02T11:42:48,497 copying build/lib/cwl_utils/testdata/remote-cwl/tool2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/remote-cwl 2023-09-02T11:42:48,498 copying build/lib/cwl_utils/testdata/remote-cwl/wf1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/remote-cwl 2023-09-02T11:42:48,500 copying build/lib/cwl_utils/testdata/remote-cwl/tool1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/remote-cwl 2023-09-02T11:42:48,502 copying build/lib/cwl_utils/testdata/record-output_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,504 copying build/lib/cwl_utils/testdata/scatter-wf2_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,506 copying build/lib/cwl_utils/testdata/count-lines6-wf_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,507 copying build/lib/cwl_utils/testdata/scatter-wf3_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,509 copying build/lib/cwl_utils/testdata/scatter-wf1_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,510 copying build/lib/cwl_utils/testdata/step_valuefrom5_wf_with_id_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,512 copying build/lib/cwl_utils/testdata/formattest2_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,514 copying build/lib/cwl_utils/testdata/workflow_input_sf_expr_array_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,515 copying build/lib/cwl_utils/testdata/js-expr-req-wf.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,517 copying build/lib/cwl_utils/testdata/count-lines6-single-source-wf_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,519 creating build/bdist.linux-armv7l/wheel/cwl_utils/testdata/workflows 2023-09-02T11:42:48,520 copying build/lib/cwl_utils/testdata/workflows/scatter-wf4.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/workflows 2023-09-02T11:42:48,522 copying build/lib/cwl_utils/testdata/workflows/import-in-type.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/workflows 2023-09-02T11:42:48,523 copying build/lib/cwl_utils/testdata/workflows/wc-tool.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/workflows 2023-09-02T11:42:48,525 copying build/lib/cwl_utils/testdata/workflows/wf5.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/workflows 2023-09-02T11:42:48,527 copying build/lib/cwl_utils/testdata/workflows/type-import.yaml -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/workflows 2023-09-02T11:42:48,528 copying build/lib/cwl_utils/testdata/workflows/parseInt-tool.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/workflows 2023-09-02T11:42:48,530 copying build/lib/cwl_utils/testdata/workflows/count-lines16-wf.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/workflows 2023-09-02T11:42:48,532 copying build/lib/cwl_utils/testdata/stdout-wf_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,533 copying build/lib/cwl_utils/testdata/md5sum.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,535 copying build/lib/cwl_utils/testdata/workflow_input_sf_expr_array.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,537 copying build/lib/cwl_utils/testdata/step-valuefrom2-wf_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,538 copying build/lib/cwl_utils/testdata/cond-wf-003.1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,540 copying build/lib/cwl_utils/testdata/workflow_input_sf_expr.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,542 copying build/lib/cwl_utils/testdata/echo_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,543 copying build/lib/cwl_utils/testdata/cond-wf-004.1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,545 copying build/lib/cwl_utils/testdata/dockstore-tool-md5sum_v11.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,547 copying build/lib/cwl_utils/testdata/count-lines7-wf_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,548 copying build/lib/cwl_utils/testdata/record-output-wf_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,550 copying build/lib/cwl_utils/testdata/workflow_input_format_expr_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,552 creating build/bdist.linux-armv7l/wheel/cwl_utils/testdata/types 2023-09-02T11:42:48,553 copying build/lib/cwl_utils/testdata/types/singletype.yml -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/types 2023-09-02T11:42:48,555 copying build/lib/cwl_utils/testdata/types/singletype2.yml -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/types 2023-09-02T11:42:48,557 copying build/lib/cwl_utils/testdata/types/testtypes.yml -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/types 2023-09-02T11:42:48,558 copying build/lib/cwl_utils/testdata/types/recursive.yml -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/types 2023-09-02T11:42:48,560 copying build/lib/cwl_utils/testdata/types/array.yml -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/types 2023-09-02T11:42:48,562 copying build/lib/cwl_utils/testdata/dockstore-tool-md5sum.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,563 copying build/lib/cwl_utils/testdata/EDAM_subset.owl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,566 copying build/lib/cwl_utils/testdata/foo-array.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,568 copying build/lib/cwl_utils/testdata/record-output_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,570 copying build/lib/cwl_utils/testdata/stdout-wf_v1_1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,571 copying build/lib/cwl_utils/testdata/cond-single-source-wf-005.1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,573 copying build/lib/cwl_utils/testdata/stdout-wf_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,575 copying build/lib/cwl_utils/testdata/scatter-wf3_v1_0.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,576 copying build/lib/cwl_utils/testdata/md5sum_v11.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,578 copying build/lib/cwl_utils/testdata/count-lines6-wf_v1_2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,580 copying build/lib/cwl_utils/testdata/cond-wf-005.1.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,582 creating build/bdist.linux-armv7l/wheel/cwl_utils/testdata/checker_wf 2023-09-02T11:42:48,582 copying build/lib/cwl_utils/testdata/checker_wf/broken-wf2.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/checker_wf 2023-09-02T11:42:48,584 copying build/lib/cwl_utils/testdata/checker_wf/broken-wf3.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/checker_wf 2023-09-02T11:42:48,586 copying build/lib/cwl_utils/testdata/checker_wf/echo.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/checker_wf 2023-09-02T11:42:48,587 copying build/lib/cwl_utils/testdata/checker_wf/broken-wf.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/checker_wf 2023-09-02T11:42:48,589 copying build/lib/cwl_utils/testdata/checker_wf/functional-wf.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/checker_wf 2023-09-02T11:42:48,591 copying build/lib/cwl_utils/testdata/checker_wf/cat.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata/checker_wf 2023-09-02T11:42:48,593 copying build/lib/cwl_utils/testdata/seqtk_seq.cwl -> build/bdist.linux-armv7l/wheel/cwl_utils/testdata 2023-09-02T11:42:48,594 copying build/lib/cwl_utils/__init__.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,596 copying build/lib/cwl_utils/types.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,597 copying build/lib/cwl_utils/loghandler.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,599 copying build/lib/cwl_utils/__meta__.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,601 creating build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-09-02T11:42:48,602 copying build/lib/cwl_utils/tests/load_cwl_by_path.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-09-02T11:42:48,604 copying build/lib/cwl_utils/tests/test_js_sandbox.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-09-02T11:42:48,606 copying build/lib/cwl_utils/tests/test_docker_extract.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-09-02T11:42:48,607 copying build/lib/cwl_utils/tests/test_format.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-09-02T11:42:48,610 copying build/lib/cwl_utils/tests/util.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-09-02T11:42:48,611 copying build/lib/cwl_utils/tests/test_etools_to_clt.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-09-02T11:42:48,613 copying build/lib/cwl_utils/tests/test_graph_split.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-09-02T11:42:48,615 copying build/lib/cwl_utils/tests/test_examples.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-09-02T11:42:48,617 copying build/lib/cwl_utils/tests/__init__.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-09-02T11:42:48,618 copying build/lib/cwl_utils/tests/test_parser_utils.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-09-02T11:42:48,621 copying build/lib/cwl_utils/tests/test_subscope.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-09-02T11:42:48,623 copying build/lib/cwl_utils/tests/test_meta.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-09-02T11:42:48,624 copying build/lib/cwl_utils/tests/test_cite_extract.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-09-02T11:42:48,626 copying build/lib/cwl_utils/tests/test_parser.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-09-02T11:42:48,628 copying build/lib/cwl_utils/tests/test_utils.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-09-02T11:42:48,630 copying build/lib/cwl_utils/tests/test_packing.py -> build/bdist.linux-armv7l/wheel/cwl_utils/tests 2023-09-02T11:42:48,632 copying build/lib/cwl_utils/normalizer.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,634 copying build/lib/cwl_utils/cwl_v1_1_expression_refactor.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,638 copying build/lib/cwl_utils/graph_split.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,640 copying build/lib/cwl_utils/image_puller.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,642 copying build/lib/cwl_utils/sandboxjs.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,645 copying build/lib/cwl_utils/cite_extract.py -> build/bdist.linux-armv7l/wheel/cwl_utils 2023-09-02T11:42:48,647 running install_egg_info 2023-09-02T11:42:48,678 Copying cwl_utils.egg-info to build/bdist.linux-armv7l/wheel/cwl_utils-0.29-py3.9.egg-info 2023-09-02T11:42:48,690 running install_scripts 2023-09-02T11:42:48,707 creating build/bdist.linux-armv7l/wheel/cwl_utils-0.29.dist-info/WHEEL 2023-09-02T11:42:48,710 creating '/tmp/pip-wheel-q57wmwe6/cwl_utils-0.29-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-02T11:42:48,713 adding 'cwl_utils/__init__.py' 2023-09-02T11:42:48,714 adding 'cwl_utils/__meta__.py' 2023-09-02T11:42:48,715 adding 'cwl_utils/cite_extract.py' 2023-09-02T11:42:48,716 adding 'cwl_utils/cwlNodeEngine.js' 2023-09-02T11:42:48,718 adding 'cwl_utils/cwlNodeEngineJSConsole.js' 2023-09-02T11:42:48,719 adding 'cwl_utils/cwlNodeEngineWithContext.js' 2023-09-02T11:42:48,727 adding 'cwl_utils/cwl_v1_0_expression_refactor.py' 2023-09-02T11:42:48,736 adding 'cwl_utils/cwl_v1_1_expression_refactor.py' 2023-09-02T11:42:48,745 adding 'cwl_utils/cwl_v1_2_expression_refactor.py' 2023-09-02T11:42:48,747 adding 'cwl_utils/docker_extract.py' 2023-09-02T11:42:48,748 adding 'cwl_utils/errors.py' 2023-09-02T11:42:48,750 adding 'cwl_utils/expression.py' 2023-09-02T11:42:48,752 adding 'cwl_utils/expression_refactor.py' 2023-09-02T11:42:48,754 adding 'cwl_utils/file_formats.py' 2023-09-02T11:42:48,756 adding 'cwl_utils/graph_split.py' 2023-09-02T11:42:48,757 adding 'cwl_utils/image_puller.py' 2023-09-02T11:42:48,758 adding 'cwl_utils/loghandler.py' 2023-09-02T11:42:48,760 adding 'cwl_utils/normalizer.py' 2023-09-02T11:42:48,761 adding 'cwl_utils/pack.py' 2023-09-02T11:42:48,762 adding 'cwl_utils/py.typed' 2023-09-02T11:42:48,765 adding 'cwl_utils/sandboxjs.py' 2023-09-02T11:42:48,767 adding 'cwl_utils/schemadef.py' 2023-09-02T11:42:48,768 adding 'cwl_utils/singularity.py' 2023-09-02T11:42:48,770 adding 'cwl_utils/types.py' 2023-09-02T11:42:48,771 adding 'cwl_utils/utils.py' 2023-09-02T11:42:48,774 adding 'cwl_utils/parser/__init__.py' 2023-09-02T11:42:48,801 adding 'cwl_utils/parser/cwl_v1_0.py' 2023-09-02T11:42:48,806 adding 'cwl_utils/parser/cwl_v1_0_utils.py' 2023-09-02T11:42:48,838 adding 'cwl_utils/parser/cwl_v1_1.py' 2023-09-02T11:42:48,844 adding 'cwl_utils/parser/cwl_v1_1_utils.py' 2023-09-02T11:42:48,879 adding 'cwl_utils/parser/cwl_v1_2.py' 2023-09-02T11:42:48,885 adding 'cwl_utils/parser/cwl_v1_2_utils.py' 2023-09-02T11:42:48,886 adding 'cwl_utils/parser/latest.py' 2023-09-02T11:42:48,888 adding 'cwl_utils/parser/utils.py' 2023-09-02T11:42:48,894 adding 'cwl_utils/testdata/EDAM_subset.owl' 2023-09-02T11:42:48,895 adding 'cwl_utils/testdata/cond-single-source-wf-003.1.cwl' 2023-09-02T11:42:48,896 adding 'cwl_utils/testdata/cond-single-source-wf-004.1.cwl' 2023-09-02T11:42:48,898 adding 'cwl_utils/testdata/cond-single-source-wf-005.1.cwl' 2023-09-02T11:42:48,899 adding 'cwl_utils/testdata/cond-wf-003.1.cwl' 2023-09-02T11:42:48,900 adding 'cwl_utils/testdata/cond-wf-004.1.cwl' 2023-09-02T11:42:48,901 adding 'cwl_utils/testdata/cond-wf-005.1.cwl' 2023-09-02T11:42:48,902 adding 'cwl_utils/testdata/count-lines6-single-source-wf_v1_0.cwl' 2023-09-02T11:42:48,903 adding 'cwl_utils/testdata/count-lines6-single-source-wf_v1_1.cwl' 2023-09-02T11:42:48,905 adding 'cwl_utils/testdata/count-lines6-single-source-wf_v1_2.cwl' 2023-09-02T11:42:48,906 adding 'cwl_utils/testdata/count-lines6-wf_v1_0.cwl' 2023-09-02T11:42:48,907 adding 'cwl_utils/testdata/count-lines6-wf_v1_1.cwl' 2023-09-02T11:42:48,908 adding 'cwl_utils/testdata/count-lines6-wf_v1_2.cwl' 2023-09-02T11:42:48,909 adding 'cwl_utils/testdata/count-lines7-single-source-wf_v1_0.cwl' 2023-09-02T11:42:48,910 adding 'cwl_utils/testdata/count-lines7-single-source-wf_v1_1.cwl' 2023-09-02T11:42:48,911 adding 'cwl_utils/testdata/count-lines7-single-source-wf_v1_2.cwl' 2023-09-02T11:42:48,913 adding 'cwl_utils/testdata/count-lines7-wf_v1_0.cwl' 2023-09-02T11:42:48,914 adding 'cwl_utils/testdata/count-lines7-wf_v1_1.cwl' 2023-09-02T11:42:48,915 adding 'cwl_utils/testdata/count-lines7-wf_v1_2.cwl' 2023-09-02T11:42:48,916 adding 'cwl_utils/testdata/debian_image_id.cwl' 2023-09-02T11:42:48,917 adding 'cwl_utils/testdata/dockstore-tool-md5sum.cwl' 2023-09-02T11:42:48,919 adding 'cwl_utils/testdata/dockstore-tool-md5sum_v11.cwl' 2023-09-02T11:42:48,920 adding 'cwl_utils/testdata/dockstore-tool-md5sum_v12.cwl' 2023-09-02T11:42:48,921 adding 'cwl_utils/testdata/echo-tool-packed.cwl' 2023-09-02T11:42:48,922 adding 'cwl_utils/testdata/echo_v1_0.cwl' 2023-09-02T11:42:48,923 adding 'cwl_utils/testdata/echo_v1_1.cwl' 2023-09-02T11:42:48,925 adding 'cwl_utils/testdata/echo_v1_2.cwl' 2023-09-02T11:42:48,926 adding 'cwl_utils/testdata/foo-array.cwl' 2023-09-02T11:42:48,927 adding 'cwl_utils/testdata/foo.cwl' 2023-09-02T11:42:48,928 adding 'cwl_utils/testdata/formattest2.cwl' 2023-09-02T11:42:48,929 adding 'cwl_utils/testdata/formattest2_v1_0.cwl' 2023-09-02T11:42:48,930 adding 'cwl_utils/testdata/formattest2_v1_1.cwl' 2023-09-02T11:42:48,931 adding 'cwl_utils/testdata/gx_edam.ttl' 2023-09-02T11:42:48,932 adding 'cwl_utils/testdata/js-expr-req-wf.cwl' 2023-09-02T11:42:48,934 adding 'cwl_utils/testdata/lib.js' 2023-09-02T11:42:48,935 adding 'cwl_utils/testdata/md5sum.cwl' 2023-09-02T11:42:48,936 adding 'cwl_utils/testdata/md5sum.input' 2023-09-02T11:42:48,937 adding 'cwl_utils/testdata/md5sum_v11.cwl' 2023-09-02T11:42:48,938 adding 'cwl_utils/testdata/md5sum_v12.cwl' 2023-09-02T11:42:48,939 adding 'cwl_utils/testdata/record-output-wf_v1_0.cwl' 2023-09-02T11:42:48,940 adding 'cwl_utils/testdata/record-output-wf_v1_1.cwl' 2023-09-02T11:42:48,941 adding 'cwl_utils/testdata/record-output-wf_v1_2.cwl' 2023-09-02T11:42:48,943 adding 'cwl_utils/testdata/record-output_v1_0.cwl' 2023-09-02T11:42:48,944 adding 'cwl_utils/testdata/record-output_v1_1.cwl' 2023-09-02T11:42:48,945 adding 'cwl_utils/testdata/record-output_v1_2.cwl' 2023-09-02T11:42:48,946 adding 'cwl_utils/testdata/scatter-wf1_v1_0.cwl' 2023-09-02T11:42:48,947 adding 'cwl_utils/testdata/scatter-wf1_v1_1.cwl' 2023-09-02T11:42:48,949 adding 'cwl_utils/testdata/scatter-wf1_v1_2.cwl' 2023-09-02T11:42:48,950 adding 'cwl_utils/testdata/scatter-wf2_v1_0.cwl' 2023-09-02T11:42:48,951 adding 'cwl_utils/testdata/scatter-wf2_v1_1.cwl' 2023-09-02T11:42:48,952 adding 'cwl_utils/testdata/scatter-wf2_v1_2.cwl' 2023-09-02T11:42:48,953 adding 'cwl_utils/testdata/scatter-wf3_v1_0.cwl' 2023-09-02T11:42:48,955 adding 'cwl_utils/testdata/scatter-wf3_v1_1.cwl' 2023-09-02T11:42:48,956 adding 'cwl_utils/testdata/scatter-wf3_v1_2.cwl' 2023-09-02T11:42:48,957 adding 'cwl_utils/testdata/seqtk_seq.cwl' 2023-09-02T11:42:48,958 adding 'cwl_utils/testdata/stdout-wf_v1_0.cwl' 2023-09-02T11:42:48,960 adding 'cwl_utils/testdata/stdout-wf_v1_1.cwl' 2023-09-02T11:42:48,961 adding 'cwl_utils/testdata/stdout-wf_v1_2.cwl' 2023-09-02T11:42:48,962 adding 'cwl_utils/testdata/step-valuefrom2-wf_v1_0.cwl' 2023-09-02T11:42:48,963 adding 'cwl_utils/testdata/step-valuefrom2-wf_v1_1.cwl' 2023-09-02T11:42:48,964 adding 'cwl_utils/testdata/step-valuefrom2-wf_v1_2.cwl' 2023-09-02T11:42:48,966 adding 'cwl_utils/testdata/step-valuefrom3-wf_v1_0.cwl' 2023-09-02T11:42:48,967 adding 'cwl_utils/testdata/step-valuefrom3-wf_v1_1.cwl' 2023-09-02T11:42:48,968 adding 'cwl_utils/testdata/step-valuefrom3-wf_v1_2.cwl' 2023-09-02T11:42:48,969 adding 'cwl_utils/testdata/step_valuefrom5_wf_v1_0.cwl' 2023-09-02T11:42:48,970 adding 'cwl_utils/testdata/step_valuefrom5_wf_v1_1.cwl' 2023-09-02T11:42:48,972 adding 'cwl_utils/testdata/step_valuefrom5_wf_v1_2.cwl' 2023-09-02T11:42:48,973 adding 'cwl_utils/testdata/step_valuefrom5_wf_with_id_v1_0.cwl' 2023-09-02T11:42:48,974 adding 'cwl_utils/testdata/step_valuefrom5_wf_with_id_v1_1.cwl' 2023-09-02T11:42:48,975 adding 'cwl_utils/testdata/step_valuefrom5_wf_with_id_v1_2.cwl' 2023-09-02T11:42:48,976 adding 'cwl_utils/testdata/wc3-tool_v1_0.cwl' 2023-09-02T11:42:48,978 adding 'cwl_utils/testdata/wc3-tool_v1_1.cwl' 2023-09-02T11:42:48,979 adding 'cwl_utils/testdata/wc3-tool_v1_2.cwl' 2023-09-02T11:42:48,980 adding 'cwl_utils/testdata/wf2.cwl' 2023-09-02T11:42:48,981 adding 'cwl_utils/testdata/workflow_input_format_expr.cwl' 2023-09-02T11:42:48,982 adding 'cwl_utils/testdata/workflow_input_format_expr_v1_1.cwl' 2023-09-02T11:42:48,984 adding 'cwl_utils/testdata/workflow_input_format_expr_v1_2.cwl' 2023-09-02T11:42:48,985 adding 'cwl_utils/testdata/workflow_input_sf_expr.cwl' 2023-09-02T11:42:48,986 adding 'cwl_utils/testdata/workflow_input_sf_expr_array.cwl' 2023-09-02T11:42:48,987 adding 'cwl_utils/testdata/workflow_input_sf_expr_array_v1_1.cwl' 2023-09-02T11:42:48,988 adding 'cwl_utils/testdata/workflow_input_sf_expr_array_v1_2.cwl' 2023-09-02T11:42:48,990 adding 'cwl_utils/testdata/workflow_input_sf_expr_v1_1.cwl' 2023-09-02T11:42:48,991 adding 'cwl_utils/testdata/workflow_input_sf_expr_v1_2.cwl' 2023-09-02T11:42:48,993 adding 'cwl_utils/testdata/checker_wf/broken-wf.cwl' 2023-09-02T11:42:48,994 adding 'cwl_utils/testdata/checker_wf/broken-wf2.cwl' 2023-09-02T11:42:48,995 adding 'cwl_utils/testdata/checker_wf/broken-wf3.cwl' 2023-09-02T11:42:48,996 adding 'cwl_utils/testdata/checker_wf/cat.cwl' 2023-09-02T11:42:48,997 adding 'cwl_utils/testdata/checker_wf/echo.cwl' 2023-09-02T11:42:48,999 adding 'cwl_utils/testdata/checker_wf/functional-wf.cwl' 2023-09-02T11:42:49,000 adding 'cwl_utils/testdata/remote-cwl/tool1.cwl' 2023-09-02T11:42:49,002 adding 'cwl_utils/testdata/remote-cwl/tool2.cwl' 2023-09-02T11:42:49,003 adding 'cwl_utils/testdata/remote-cwl/wf1.cwl' 2023-09-02T11:42:49,005 adding 'cwl_utils/testdata/types/array.yml' 2023-09-02T11:42:49,006 adding 'cwl_utils/testdata/types/recursive.yml' 2023-09-02T11:42:49,007 adding 'cwl_utils/testdata/types/singletype.yml' 2023-09-02T11:42:49,008 adding 'cwl_utils/testdata/types/singletype2.yml' 2023-09-02T11:42:49,009 adding 'cwl_utils/testdata/types/testtypes.yml' 2023-09-02T11:42:49,011 adding 'cwl_utils/testdata/workflows/count-lines16-wf.cwl' 2023-09-02T11:42:49,013 adding 'cwl_utils/testdata/workflows/import-in-type.cwl' 2023-09-02T11:42:49,014 adding 'cwl_utils/testdata/workflows/parseInt-tool.cwl' 2023-09-02T11:42:49,015 adding 'cwl_utils/testdata/workflows/scatter-wf4.cwl' 2023-09-02T11:42:49,016 adding 'cwl_utils/testdata/workflows/type-import.yaml' 2023-09-02T11:42:49,017 adding 'cwl_utils/testdata/workflows/wc-tool.cwl' 2023-09-02T11:42:49,018 adding 'cwl_utils/testdata/workflows/wf5.cwl' 2023-09-02T11:42:49,020 adding 'cwl_utils/tests/__init__.py' 2023-09-02T11:42:49,022 adding 'cwl_utils/tests/load_cwl_by_path.py' 2023-09-02T11:42:49,023 adding 'cwl_utils/tests/test_cite_extract.py' 2023-09-02T11:42:49,024 adding 'cwl_utils/tests/test_docker_extract.py' 2023-09-02T11:42:49,026 adding 'cwl_utils/tests/test_etools_to_clt.py' 2023-09-02T11:42:49,027 adding 'cwl_utils/tests/test_examples.py' 2023-09-02T11:42:49,028 adding 'cwl_utils/tests/test_format.py' 2023-09-02T11:42:49,030 adding 'cwl_utils/tests/test_graph_split.py' 2023-09-02T11:42:49,031 adding 'cwl_utils/tests/test_js_sandbox.py' 2023-09-02T11:42:49,033 adding 'cwl_utils/tests/test_meta.py' 2023-09-02T11:42:49,034 adding 'cwl_utils/tests/test_packing.py' 2023-09-02T11:42:49,035 adding 'cwl_utils/tests/test_parser.py' 2023-09-02T11:42:49,038 adding 'cwl_utils/tests/test_parser_utils.py' 2023-09-02T11:42:49,040 adding 'cwl_utils/tests/test_subscope.py' 2023-09-02T11:42:49,041 adding 'cwl_utils/tests/test_utils.py' 2023-09-02T11:42:49,042 adding 'cwl_utils/tests/util.py' 2023-09-02T11:42:49,045 adding 'cwl_utils-0.29.dist-info/METADATA' 2023-09-02T11:42:49,046 adding 'cwl_utils-0.29.dist-info/WHEEL' 2023-09-02T11:42:49,047 adding 'cwl_utils-0.29.dist-info/entry_points.txt' 2023-09-02T11:42:49,048 adding 'cwl_utils-0.29.dist-info/top_level.txt' 2023-09-02T11:42:49,050 adding 'cwl_utils-0.29.dist-info/RECORD' 2023-09-02T11:42:49,059 removing build/bdist.linux-armv7l/wheel 2023-09-02T11:42:49,177 Building wheel for cwl-utils (setup.py): finished with status 'done' 2023-09-02T11:42:49,184 Created wheel for cwl-utils: filename=cwl_utils-0.29-py3-none-any.whl size=309214 sha256=6fe5042df6995ab13029bb2096e636988dce53a5a87142cc5155ea2254b494a1 2023-09-02T11:42:49,185 Stored in directory: /tmp/pip-ephem-wheel-cache-3_9vy7uv/wheels/11/9b/d1/ca22487fbcca041b961e01d5d6ffeae802a721b230447950fe 2023-09-02T11:42:49,201 Successfully built cwl-utils 2023-09-02T11:42:49,216 Removed build tracker: '/tmp/pip-build-tracker-a3cqg73j'