2023-09-06T09:47:17,112 Created temporary directory: /tmp/pip-build-tracker-4cd0ll7g 2023-09-06T09:47:17,114 Initialized build tracking at /tmp/pip-build-tracker-4cd0ll7g 2023-09-06T09:47:17,114 Created build tracker: /tmp/pip-build-tracker-4cd0ll7g 2023-09-06T09:47:17,114 Entered build tracker: /tmp/pip-build-tracker-4cd0ll7g 2023-09-06T09:47:17,115 Created temporary directory: /tmp/pip-wheel-an2clod6 2023-09-06T09:47:17,119 Created temporary directory: /tmp/pip-ephem-wheel-cache-mksccu1h 2023-09-06T09:47:17,146 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-06T09:47:17,150 2 location(s) to search for versions of neurots: 2023-09-06T09:47:17,150 * https://pypi.org/simple/neurots/ 2023-09-06T09:47:17,150 * https://www.piwheels.org/simple/neurots/ 2023-09-06T09:47:17,150 Fetching project page and analyzing links: https://pypi.org/simple/neurots/ 2023-09-06T09:47:17,151 Getting page https://pypi.org/simple/neurots/ 2023-09-06T09:47:17,153 Found index url https://pypi.org/simple/ 2023-09-06T09:47:17,203 Fetched page https://pypi.org/simple/neurots/ as application/vnd.pypi.simple.v1+json 2023-09-06T09:47:17,207 Found link https://files.pythonhosted.org/packages/d0/80/0ff91cba5c0a5fd60cfb01f995aa6a4c68fd5d3598b8b6b0b02ac866da8a/neurots-0.1.tar.gz (from https://pypi.org/simple/neurots/), version: 0.1 2023-09-06T09:47:17,207 Skipping link: No binaries permitted for neurots: https://files.pythonhosted.org/packages/74/23/d6ba500cc5799c8182e5e8a04c9fe269f1ba980008ecb2276920b726087f/NeuroTS-3.1.0-py3-none-any.whl (from https://pypi.org/simple/neurots/) (requires-python:>=3.8) 2023-09-06T09:47:17,208 Found link https://files.pythonhosted.org/packages/4d/92/cec77983cfdddabc545dd99b13f51dee3bc8dfeea98a3c4cbf70ba68b873/NeuroTS-3.1.0.tar.gz (from https://pypi.org/simple/neurots/) (requires-python:>=3.8), version: 3.1.0 2023-09-06T09:47:17,209 Found link https://files.pythonhosted.org/packages/41/ff/8fc2e84e22bbf397166de3b3690b704766fe22ee046a160b25bbdb7de906/NeuroTS-3.1.1.tar.gz (from https://pypi.org/simple/neurots/) (requires-python:>=3.8), version: 3.1.1 2023-09-06T09:47:17,209 Skipping link: No binaries permitted for neurots: https://files.pythonhosted.org/packages/8a/83/464579b1ba7ed38bc7689a00171486d8e0dc8ca828b40e4ab8051e6128e7/NeuroTS-3.2.0-py3-none-any.whl (from https://pypi.org/simple/neurots/) (requires-python:>=3.8) 2023-09-06T09:47:17,209 Found link https://files.pythonhosted.org/packages/9e/f6/5306a7ba58660bbc37715568ddadace28408db2473a35bf3b76176503cbe/NeuroTS-3.2.0.tar.gz (from https://pypi.org/simple/neurots/) (requires-python:>=3.8), version: 3.2.0 2023-09-06T09:47:17,210 Skipping link: No binaries permitted for neurots: https://files.pythonhosted.org/packages/66/27/fa4e41748b27aedc4a669a9dfcaa78c3ba39a05323d1696a3b49429b3826/NeuroTS-3.3.0-py3-none-any.whl (from https://pypi.org/simple/neurots/) (requires-python:>=3.8) 2023-09-06T09:47:17,210 Found link https://files.pythonhosted.org/packages/da/95/13afc1517c42f4d49c8194c1618a723e6e871ceb4a2b6010c802b3207f12/NeuroTS-3.3.0.tar.gz (from https://pypi.org/simple/neurots/) (requires-python:>=3.8), version: 3.3.0 2023-09-06T09:47:17,210 Skipping link: No binaries permitted for neurots: https://files.pythonhosted.org/packages/8a/27/2359a72565783747b44c92ac3e879d26a3286c67c3052d9d445aaa83e3c1/NeuroTS-3.3.1-py3-none-any.whl (from https://pypi.org/simple/neurots/) (requires-python:>=3.8) 2023-09-06T09:47:17,211 Found link https://files.pythonhosted.org/packages/58/ba/a7d89e31726d54b44402b8b0ab20f5cb6a63c7be91e87482cab346de04c3/NeuroTS-3.3.1.tar.gz (from https://pypi.org/simple/neurots/) (requires-python:>=3.8), version: 3.3.1 2023-09-06T09:47:17,211 Skipping link: No binaries permitted for neurots: https://files.pythonhosted.org/packages/70/55/316d77328f669bc8678b0fa51ec8d5b420e40d2657517ce11216b7ed66aa/NeuroTS-3.3.2-py3-none-any.whl (from https://pypi.org/simple/neurots/) (requires-python:>=3.8) 2023-09-06T09:47:17,212 Found link https://files.pythonhosted.org/packages/f5/ad/575fba2e56a41d0e94ce8f5f0a0bebbb2d2f9faba4d61621522879ae6704/NeuroTS-3.3.2.tar.gz (from https://pypi.org/simple/neurots/) (requires-python:>=3.8), version: 3.3.2 2023-09-06T09:47:17,212 Skipping link: No binaries permitted for neurots: https://files.pythonhosted.org/packages/5c/c7/5780620379ebfb756e5216324c62d394047e3f7cf03bdffb5e9e3f844443/NeuroTS-3.4.0-py3-none-any.whl (from https://pypi.org/simple/neurots/) (requires-python:>=3.8) 2023-09-06T09:47:17,213 Found link https://files.pythonhosted.org/packages/38/68/90a75aa6857dfbeb5ed90f6fd4ca908a456a13d79240d8790e4b34a43fc5/NeuroTS-3.4.0.tar.gz (from https://pypi.org/simple/neurots/) (requires-python:>=3.8), version: 3.4.0 2023-09-06T09:47:17,213 Skipping link: No binaries permitted for neurots: https://files.pythonhosted.org/packages/7a/68/fca0c00ad6a9244d948cc41fd1cf638815c25f1afd7eba3fcfcb53147b17/NeuroTS-3.4.1-py3-none-any.whl (from https://pypi.org/simple/neurots/) (requires-python:>=3.8) 2023-09-06T09:47:17,213 Found link https://files.pythonhosted.org/packages/bd/60/8f8eaf46649ad30383e4fed951c53ccb22d682b92e64d152675092c2c916/NeuroTS-3.4.1.tar.gz (from https://pypi.org/simple/neurots/) (requires-python:>=3.8), version: 3.4.1 2023-09-06T09:47:17,214 Fetching project page and analyzing links: https://www.piwheels.org/simple/neurots/ 2023-09-06T09:47:17,214 Getting page https://www.piwheels.org/simple/neurots/ 2023-09-06T09:47:17,215 Found index url https://www.piwheels.org/simple/ 2023-09-06T09:47:17,425 Fetched page https://www.piwheels.org/simple/neurots/ as text/html 2023-09-06T09:47:17,428 Skipping link: No binaries permitted for neurots: https://www.piwheels.org/simple/neurots/NeuroTS-3.4.0-py3-none-any.whl#sha256=bc3465a74e57344c06b94e082e2dda5c4d8c31b34f6637744c32423bb6ef31ed (from https://www.piwheels.org/simple/neurots/) (requires-python:>=3.8) 2023-09-06T09:47:17,428 Skipping link: No binaries permitted for neurots: https://www.piwheels.org/simple/neurots/NeuroTS-3.3.2-py3-none-any.whl#sha256=fa8dee2de0a8354937ab4b680c06c70571b5c9e79f928e3e0a9a665f15661442 (from https://www.piwheels.org/simple/neurots/) (requires-python:>=3.8) 2023-09-06T09:47:17,428 Skipping link: No binaries permitted for neurots: https://www.piwheels.org/simple/neurots/NeuroTS-3.3.1-py3-none-any.whl#sha256=e79235baa9c72e9402f75328100109eacf2843cf262dfb3bff816d7c973d36ac (from https://www.piwheels.org/simple/neurots/) (requires-python:>=3.8) 2023-09-06T09:47:17,429 Skipping link: No binaries permitted for neurots: https://www.piwheels.org/simple/neurots/NeuroTS-3.3.0-py3-none-any.whl#sha256=3204a2d15217008e58f512c49fde440ebb0e31160d309f28370687be75a212c4 (from https://www.piwheels.org/simple/neurots/) (requires-python:>=3.8) 2023-09-06T09:47:17,429 Skipping link: No binaries permitted for neurots: https://www.piwheels.org/simple/neurots/NeuroTS-3.2.0-py3-none-any.whl#sha256=69e42ccc87719ea7556f6dd05a0943796b273aa1a0d522bffe714c337d1081b2 (from https://www.piwheels.org/simple/neurots/) (requires-python:>=3.8) 2023-09-06T09:47:17,429 Skipping link: No binaries permitted for neurots: https://www.piwheels.org/simple/neurots/NeuroTS-3.1.1-py3-none-any.whl#sha256=04633dc995b1fb5922d35e27bacd33b672dbe4639a87f944c3681902ab9e1afc (from https://www.piwheels.org/simple/neurots/) (requires-python:>=3.8) 2023-09-06T09:47:17,429 Skipping link: No binaries permitted for neurots: https://www.piwheels.org/simple/neurots/NeuroTS-3.1.0-py3-none-any.whl#sha256=d0597dc1730313a484557d046d2340677e3f7425ca268a601b323b7ba7f38b2f (from https://www.piwheels.org/simple/neurots/) (requires-python:>=3.8) 2023-09-06T09:47:17,429 Skipping link: No binaries permitted for neurots: https://www.piwheels.org/simple/neurots/neurots-0.1-py3-none-any.whl#sha256=a569526207bf4f39eed0305f67c2534c26aeee20ef01cdf68830112c97cc69c5 (from https://www.piwheels.org/simple/neurots/) 2023-09-06T09:47:17,429 Skipping link: not a file: https://www.piwheels.org/simple/neurots/ 2023-09-06T09:47:17,430 Skipping link: not a file: https://pypi.org/simple/neurots/ 2023-09-06T09:47:17,448 Given no hashes to check 1 links for project 'neurots': discarding no candidates 2023-09-06T09:47:17,465 Collecting neurots==3.4.1 2023-09-06T09:47:17,467 Created temporary directory: /tmp/pip-unpack-53qmp9qy 2023-09-06T09:47:17,610 Downloading NeuroTS-3.4.1.tar.gz (2.1 MB) 2023-09-06T09:47:18,417 Added neurots==3.4.1 from https://files.pythonhosted.org/packages/bd/60/8f8eaf46649ad30383e4fed951c53ccb22d682b92e64d152675092c2c916/NeuroTS-3.4.1.tar.gz to build tracker '/tmp/pip-build-tracker-4cd0ll7g' 2023-09-06T09:47:18,422 Created temporary directory: /tmp/pip-build-env-fyt1lhlo 2023-09-06T09:47:18,432 Installing build dependencies: started 2023-09-06T09:47:18,433 Running command pip subprocess to install build dependencies 2023-09-06T09:47:19,601 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2023-09-06T09:47:20,146 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-06T09:47:21,868 Collecting setuptools>=45 2023-09-06T09:47:21,933 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.1.2-py3-none-any.whl (805 kB) 2023-09-06T09:47:22,278 Collecting setuptools_scm[toml]>=6.2 2023-09-06T09:47:22,298 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.1.0-py3-none-any.whl (43 kB) 2023-09-06T09:47:22,661 Collecting packaging>=20.0 (from setuptools_scm[toml]>=6.2) 2023-09-06T09:47:22,678 Using cached https://www.piwheels.org/simple/packaging/packaging-23.1-py3-none-any.whl (48 kB) 2023-09-06T09:47:22,805 Collecting typing-extensions (from setuptools_scm[toml]>=6.2) 2023-09-06T09:47:22,821 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.7.1-py3-none-any.whl (33 kB) 2023-09-06T09:47:22,937 Collecting tomli>=1.0.0 (from setuptools_scm[toml]>=6.2) 2023-09-06T09:47:22,953 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2023-09-06T09:47:25,009 Installing collected packages: typing-extensions, tomli, setuptools, packaging, setuptools_scm 2023-09-06T09:47:27,520 Successfully installed packaging-23.1 setuptools-68.1.2 setuptools_scm-7.1.0 tomli-2.0.1 typing-extensions-4.7.1 2023-09-06T09:47:27,719 [notice] A new release of pip is available: 23.1.2 -> 23.2.1 2023-09-06T09:47:27,720 [notice] To update, run: python3 -m pip install --upgrade pip 2023-09-06T09:47:28,008 Installing build dependencies: finished with status 'done' 2023-09-06T09:47:28,014 Getting requirements to build wheel: started 2023-09-06T09:47:28,015 Running command Getting requirements to build wheel 2023-09-06T09:47:28,586 Getting requirements to build wheel: finished with status 'done' 2023-09-06T09:47:28,601 Installing backend dependencies: started 2023-09-06T09:47:28,602 Running command pip subprocess to install backend dependencies 2023-09-06T09:47:29,752 Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2023-09-06T09:47:30,294 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-06T09:47:30,730 Collecting wheel 2023-09-06T09:47:30,750 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-09-06T09:47:32,219 Installing collected packages: wheel 2023-09-06T09:47:32,445 Creating /tmp/pip-build-env-fyt1lhlo/normal/bin 2023-09-06T09:47:32,447 changing mode of /tmp/pip-build-env-fyt1lhlo/normal/bin/wheel to 755 2023-09-06T09:47:32,459 Successfully installed wheel-0.41.2 2023-09-06T09:47:32,657 [notice] A new release of pip is available: 23.1.2 -> 23.2.1 2023-09-06T09:47:32,657 [notice] To update, run: python3 -m pip install --upgrade pip 2023-09-06T09:47:32,877 Installing backend dependencies: finished with status 'done' 2023-09-06T09:47:32,879 Created temporary directory: /tmp/pip-modern-metadata-7kahhp9y 2023-09-06T09:47:32,882 Preparing metadata (pyproject.toml): started 2023-09-06T09:47:32,883 Running command Preparing metadata (pyproject.toml) 2023-09-06T09:47:33,482 running dist_info 2023-09-06T09:47:33,503 creating /tmp/pip-modern-metadata-7kahhp9y/NeuroTS.egg-info 2023-09-06T09:47:33,508 writing /tmp/pip-modern-metadata-7kahhp9y/NeuroTS.egg-info/PKG-INFO 2023-09-06T09:47:33,511 writing dependency_links to /tmp/pip-modern-metadata-7kahhp9y/NeuroTS.egg-info/dependency_links.txt 2023-09-06T09:47:33,513 writing requirements to /tmp/pip-modern-metadata-7kahhp9y/NeuroTS.egg-info/requires.txt 2023-09-06T09:47:33,514 writing top-level names to /tmp/pip-modern-metadata-7kahhp9y/NeuroTS.egg-info/top_level.txt 2023-09-06T09:47:33,515 writing manifest file '/tmp/pip-modern-metadata-7kahhp9y/NeuroTS.egg-info/SOURCES.txt' 2023-09-06T09:47:33,568 listing git files failed - pretending there aren't any 2023-09-06T09:47:33,577 reading manifest file '/tmp/pip-modern-metadata-7kahhp9y/NeuroTS.egg-info/SOURCES.txt' 2023-09-06T09:47:33,580 reading manifest template 'MANIFEST.in' 2023-09-06T09:47:33,582 warning: no previously-included files matching '*.py[co]' found anywhere in distribution 2023-09-06T09:47:33,583 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2023-09-06T09:47:33,584 adding license file 'LICENSE.txt' 2023-09-06T09:47:33,584 adding license file 'AUTHORS.md' 2023-09-06T09:47:33,588 writing manifest file '/tmp/pip-modern-metadata-7kahhp9y/NeuroTS.egg-info/SOURCES.txt' 2023-09-06T09:47:33,590 creating '/tmp/pip-modern-metadata-7kahhp9y/NeuroTS-3.4.1.dist-info' 2023-09-06T09:47:33,775 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-06T09:47:33,782 Source in /tmp/pip-wheel-an2clod6/neurots_1f1f112b667144d1ad76f0df3f9eaeb8 has version 3.4.1, which satisfies requirement neurots==3.4.1 from https://files.pythonhosted.org/packages/bd/60/8f8eaf46649ad30383e4fed951c53ccb22d682b92e64d152675092c2c916/NeuroTS-3.4.1.tar.gz 2023-09-06T09:47:33,783 Removed neurots==3.4.1 from https://files.pythonhosted.org/packages/bd/60/8f8eaf46649ad30383e4fed951c53ccb22d682b92e64d152675092c2c916/NeuroTS-3.4.1.tar.gz from build tracker '/tmp/pip-build-tracker-4cd0ll7g' 2023-09-06T09:47:33,790 Created temporary directory: /tmp/pip-unpack-siafsi4k 2023-09-06T09:47:33,791 Building wheels for collected packages: neurots 2023-09-06T09:47:33,795 Created temporary directory: /tmp/pip-wheel-3nknr_d8 2023-09-06T09:47:33,795 Destination directory: /tmp/pip-wheel-3nknr_d8 2023-09-06T09:47:33,798 Building wheel for neurots (pyproject.toml): started 2023-09-06T09:47:33,799 Running command Building wheel for neurots (pyproject.toml) 2023-09-06T09:47:34,444 running bdist_wheel 2023-09-06T09:47:34,501 running build 2023-09-06T09:47:34,501 running build_py 2023-09-06T09:47:34,511 creating build 2023-09-06T09:47:34,512 creating build/lib 2023-09-06T09:47:34,513 creating build/lib/neurots 2023-09-06T09:47:34,514 copying neurots/basic.py -> build/lib/neurots 2023-09-06T09:47:34,516 copying neurots/__init__.py -> build/lib/neurots 2023-09-06T09:47:34,518 copying neurots/validator.py -> build/lib/neurots 2023-09-06T09:47:34,520 copying neurots/utils.py -> build/lib/neurots 2023-09-06T09:47:34,523 creating build/lib/neurots/extract_input 2023-09-06T09:47:34,524 copying neurots/extract_input/input_parameters.py -> build/lib/neurots/extract_input 2023-09-06T09:47:34,526 copying neurots/extract_input/input_distributions.py -> build/lib/neurots/extract_input 2023-09-06T09:47:34,529 copying neurots/extract_input/from_diameter.py -> build/lib/neurots/extract_input 2023-09-06T09:47:34,530 copying neurots/extract_input/__init__.py -> build/lib/neurots/extract_input 2023-09-06T09:47:34,532 copying neurots/extract_input/from_neurom.py -> build/lib/neurots/extract_input 2023-09-06T09:47:34,535 copying neurots/extract_input/from_TMD.py -> build/lib/neurots/extract_input 2023-09-06T09:47:34,537 creating build/lib/neurots/generate 2023-09-06T09:47:34,539 copying neurots/generate/tree.py -> build/lib/neurots/generate 2023-09-06T09:47:34,541 copying neurots/generate/diametrizer.py -> build/lib/neurots/generate 2023-09-06T09:47:34,544 copying neurots/generate/soma.py -> build/lib/neurots/generate 2023-09-06T09:47:34,546 copying neurots/generate/orientations.py -> build/lib/neurots/generate 2023-09-06T09:47:34,549 copying neurots/generate/__init__.py -> build/lib/neurots/generate 2023-09-06T09:47:34,551 copying neurots/generate/section.py -> build/lib/neurots/generate 2023-09-06T09:47:34,554 copying neurots/generate/grower.py -> build/lib/neurots/generate 2023-09-06T09:47:34,557 creating build/lib/neurots/preprocess 2023-09-06T09:47:34,558 copying neurots/preprocess/validity_checkers.py -> build/lib/neurots/preprocess 2023-09-06T09:47:34,560 copying neurots/preprocess/preprocessors.py -> build/lib/neurots/preprocess 2023-09-06T09:47:34,562 copying neurots/preprocess/exceptions.py -> build/lib/neurots/preprocess 2023-09-06T09:47:34,564 copying neurots/preprocess/__init__.py -> build/lib/neurots/preprocess 2023-09-06T09:47:34,566 copying neurots/preprocess/utils.py -> build/lib/neurots/preprocess 2023-09-06T09:47:34,568 copying neurots/preprocess/relevance_checkers.py -> build/lib/neurots/preprocess 2023-09-06T09:47:34,570 creating build/lib/neurots/astrocyte 2023-09-06T09:47:34,572 copying neurots/astrocyte/tmd_utils.py -> build/lib/neurots/astrocyte 2023-09-06T09:47:34,574 copying neurots/astrocyte/tree.py -> build/lib/neurots/astrocyte 2023-09-06T09:47:34,576 copying neurots/astrocyte/context.py -> build/lib/neurots/astrocyte 2023-09-06T09:47:34,578 copying neurots/astrocyte/space_colonization.py -> build/lib/neurots/astrocyte 2023-09-06T09:47:34,581 copying neurots/astrocyte/point_cloud.py -> build/lib/neurots/astrocyte 2023-09-06T09:47:34,584 copying neurots/astrocyte/__init__.py -> build/lib/neurots/astrocyte 2023-09-06T09:47:34,585 copying neurots/astrocyte/section.py -> build/lib/neurots/astrocyte 2023-09-06T09:47:34,588 copying neurots/astrocyte/grower.py -> build/lib/neurots/astrocyte 2023-09-06T09:47:34,591 creating build/lib/neurots/morphmath 2023-09-06T09:47:34,592 copying neurots/morphmath/point_array.py -> build/lib/neurots/morphmath 2023-09-06T09:47:34,594 copying neurots/morphmath/bifurcation.py -> build/lib/neurots/morphmath 2023-09-06T09:47:34,596 copying neurots/morphmath/__init__.py -> build/lib/neurots/morphmath 2023-09-06T09:47:34,598 copying neurots/morphmath/sample.py -> build/lib/neurots/morphmath 2023-09-06T09:47:34,600 copying neurots/morphmath/rotation.py -> build/lib/neurots/morphmath 2023-09-06T09:47:34,602 copying neurots/morphmath/utils.py -> build/lib/neurots/morphmath 2023-09-06T09:47:34,605 creating build/lib/neurots/generate/algorithms 2023-09-06T09:47:34,606 copying neurots/generate/algorithms/basicgrower.py -> build/lib/neurots/generate/algorithms 2023-09-06T09:47:34,608 copying neurots/generate/algorithms/common.py -> build/lib/neurots/generate/algorithms 2023-09-06T09:47:34,610 copying neurots/generate/algorithms/__init__.py -> build/lib/neurots/generate/algorithms 2023-09-06T09:47:34,612 copying neurots/generate/algorithms/abstractgrower.py -> build/lib/neurots/generate/algorithms 2023-09-06T09:47:34,614 copying neurots/generate/algorithms/tmdgrower.py -> build/lib/neurots/generate/algorithms 2023-09-06T09:47:34,616 copying neurots/generate/algorithms/barcode.py -> build/lib/neurots/generate/algorithms 2023-09-06T09:47:34,618 running egg_info 2023-09-06T09:47:34,624 writing NeuroTS.egg-info/PKG-INFO 2023-09-06T09:47:34,626 writing dependency_links to NeuroTS.egg-info/dependency_links.txt 2023-09-06T09:47:34,629 writing requirements to NeuroTS.egg-info/requires.txt 2023-09-06T09:47:34,630 writing top-level names to NeuroTS.egg-info/top_level.txt 2023-09-06T09:47:34,670 listing git files failed - pretending there aren't any 2023-09-06T09:47:34,677 reading manifest file 'NeuroTS.egg-info/SOURCES.txt' 2023-09-06T09:47:34,700 reading manifest template 'MANIFEST.in' 2023-09-06T09:47:34,702 warning: no previously-included files matching '*.py[co]' found anywhere in distribution 2023-09-06T09:47:34,703 warning: no previously-included files matching '.DS_Store' found anywhere in distribution 2023-09-06T09:47:34,704 adding license file 'LICENSE.txt' 2023-09-06T09:47:34,704 adding license file 'AUTHORS.md' 2023-09-06T09:47:34,713 writing manifest file 'NeuroTS.egg-info/SOURCES.txt' 2023-09-06T09:47:34,721 creating build/lib/neurots/schemas 2023-09-06T09:47:34,723 copying neurots/schemas/distributions.json -> build/lib/neurots/schemas 2023-09-06T09:47:34,726 copying neurots/schemas/parameters.json -> build/lib/neurots/schemas 2023-09-06T09:47:34,755 installing to build/bdist.linux-armv7l/wheel 2023-09-06T09:47:34,755 running install 2023-09-06T09:47:34,783 running install_lib 2023-09-06T09:47:34,791 creating build/bdist.linux-armv7l 2023-09-06T09:47:34,791 creating build/bdist.linux-armv7l/wheel 2023-09-06T09:47:34,793 creating build/bdist.linux-armv7l/wheel/neurots 2023-09-06T09:47:34,794 creating build/bdist.linux-armv7l/wheel/neurots/schemas 2023-09-06T09:47:34,795 copying build/lib/neurots/schemas/distributions.json -> build/bdist.linux-armv7l/wheel/neurots/schemas 2023-09-06T09:47:34,797 copying build/lib/neurots/schemas/parameters.json -> build/bdist.linux-armv7l/wheel/neurots/schemas 2023-09-06T09:47:34,800 copying build/lib/neurots/basic.py -> build/bdist.linux-armv7l/wheel/neurots 2023-09-06T09:47:34,802 copying build/lib/neurots/__init__.py -> build/bdist.linux-armv7l/wheel/neurots 2023-09-06T09:47:34,803 copying build/lib/neurots/validator.py -> build/bdist.linux-armv7l/wheel/neurots 2023-09-06T09:47:34,805 creating build/bdist.linux-armv7l/wheel/neurots/extract_input 2023-09-06T09:47:34,806 copying build/lib/neurots/extract_input/input_parameters.py -> build/bdist.linux-armv7l/wheel/neurots/extract_input 2023-09-06T09:47:34,808 copying build/lib/neurots/extract_input/input_distributions.py -> build/bdist.linux-armv7l/wheel/neurots/extract_input 2023-09-06T09:47:34,810 copying build/lib/neurots/extract_input/from_diameter.py -> build/bdist.linux-armv7l/wheel/neurots/extract_input 2023-09-06T09:47:34,812 copying build/lib/neurots/extract_input/__init__.py -> build/bdist.linux-armv7l/wheel/neurots/extract_input 2023-09-06T09:47:34,814 copying build/lib/neurots/extract_input/from_neurom.py -> build/bdist.linux-armv7l/wheel/neurots/extract_input 2023-09-06T09:47:34,816 copying build/lib/neurots/extract_input/from_TMD.py -> build/bdist.linux-armv7l/wheel/neurots/extract_input 2023-09-06T09:47:34,818 creating build/bdist.linux-armv7l/wheel/neurots/generate 2023-09-06T09:47:34,819 copying build/lib/neurots/generate/tree.py -> build/bdist.linux-armv7l/wheel/neurots/generate 2023-09-06T09:47:34,821 creating build/bdist.linux-armv7l/wheel/neurots/generate/algorithms 2023-09-06T09:47:34,822 copying build/lib/neurots/generate/algorithms/basicgrower.py -> build/bdist.linux-armv7l/wheel/neurots/generate/algorithms 2023-09-06T09:47:34,824 copying build/lib/neurots/generate/algorithms/common.py -> build/bdist.linux-armv7l/wheel/neurots/generate/algorithms 2023-09-06T09:47:34,826 copying build/lib/neurots/generate/algorithms/__init__.py -> build/bdist.linux-armv7l/wheel/neurots/generate/algorithms 2023-09-06T09:47:34,828 copying build/lib/neurots/generate/algorithms/abstractgrower.py -> build/bdist.linux-armv7l/wheel/neurots/generate/algorithms 2023-09-06T09:47:34,829 copying build/lib/neurots/generate/algorithms/tmdgrower.py -> build/bdist.linux-armv7l/wheel/neurots/generate/algorithms 2023-09-06T09:47:34,832 copying build/lib/neurots/generate/algorithms/barcode.py -> build/bdist.linux-armv7l/wheel/neurots/generate/algorithms 2023-09-06T09:47:34,834 copying build/lib/neurots/generate/diametrizer.py -> build/bdist.linux-armv7l/wheel/neurots/generate 2023-09-06T09:47:34,836 copying build/lib/neurots/generate/soma.py -> build/bdist.linux-armv7l/wheel/neurots/generate 2023-09-06T09:47:34,838 copying build/lib/neurots/generate/orientations.py -> build/bdist.linux-armv7l/wheel/neurots/generate 2023-09-06T09:47:34,841 copying build/lib/neurots/generate/__init__.py -> build/bdist.linux-armv7l/wheel/neurots/generate 2023-09-06T09:47:34,843 copying build/lib/neurots/generate/section.py -> build/bdist.linux-armv7l/wheel/neurots/generate 2023-09-06T09:47:34,845 copying build/lib/neurots/generate/grower.py -> build/bdist.linux-armv7l/wheel/neurots/generate 2023-09-06T09:47:34,848 creating build/bdist.linux-armv7l/wheel/neurots/preprocess 2023-09-06T09:47:34,849 copying build/lib/neurots/preprocess/validity_checkers.py -> build/bdist.linux-armv7l/wheel/neurots/preprocess 2023-09-06T09:47:34,850 copying build/lib/neurots/preprocess/preprocessors.py -> build/bdist.linux-armv7l/wheel/neurots/preprocess 2023-09-06T09:47:34,852 copying build/lib/neurots/preprocess/exceptions.py -> build/bdist.linux-armv7l/wheel/neurots/preprocess 2023-09-06T09:47:34,854 copying build/lib/neurots/preprocess/__init__.py -> build/bdist.linux-armv7l/wheel/neurots/preprocess 2023-09-06T09:47:34,855 copying build/lib/neurots/preprocess/utils.py -> build/bdist.linux-armv7l/wheel/neurots/preprocess 2023-09-06T09:47:34,857 copying build/lib/neurots/preprocess/relevance_checkers.py -> build/bdist.linux-armv7l/wheel/neurots/preprocess 2023-09-06T09:47:34,859 creating build/bdist.linux-armv7l/wheel/neurots/astrocyte 2023-09-06T09:47:34,860 copying build/lib/neurots/astrocyte/tmd_utils.py -> build/bdist.linux-armv7l/wheel/neurots/astrocyte 2023-09-06T09:47:34,862 copying build/lib/neurots/astrocyte/tree.py -> build/bdist.linux-armv7l/wheel/neurots/astrocyte 2023-09-06T09:47:34,863 copying build/lib/neurots/astrocyte/context.py -> build/bdist.linux-armv7l/wheel/neurots/astrocyte 2023-09-06T09:47:34,865 copying build/lib/neurots/astrocyte/space_colonization.py -> build/bdist.linux-armv7l/wheel/neurots/astrocyte 2023-09-06T09:47:34,868 copying build/lib/neurots/astrocyte/point_cloud.py -> build/bdist.linux-armv7l/wheel/neurots/astrocyte 2023-09-06T09:47:34,870 copying build/lib/neurots/astrocyte/__init__.py -> build/bdist.linux-armv7l/wheel/neurots/astrocyte 2023-09-06T09:47:34,872 copying build/lib/neurots/astrocyte/section.py -> build/bdist.linux-armv7l/wheel/neurots/astrocyte 2023-09-06T09:47:34,874 copying build/lib/neurots/astrocyte/grower.py -> build/bdist.linux-armv7l/wheel/neurots/astrocyte 2023-09-06T09:47:34,876 copying build/lib/neurots/utils.py -> build/bdist.linux-armv7l/wheel/neurots 2023-09-06T09:47:34,878 creating build/bdist.linux-armv7l/wheel/neurots/morphmath 2023-09-06T09:47:34,879 copying build/lib/neurots/morphmath/point_array.py -> build/bdist.linux-armv7l/wheel/neurots/morphmath 2023-09-06T09:47:34,881 copying build/lib/neurots/morphmath/bifurcation.py -> build/bdist.linux-armv7l/wheel/neurots/morphmath 2023-09-06T09:47:34,882 copying build/lib/neurots/morphmath/__init__.py -> build/bdist.linux-armv7l/wheel/neurots/morphmath 2023-09-06T09:47:34,884 copying build/lib/neurots/morphmath/sample.py -> build/bdist.linux-armv7l/wheel/neurots/morphmath 2023-09-06T09:47:34,886 copying build/lib/neurots/morphmath/rotation.py -> build/bdist.linux-armv7l/wheel/neurots/morphmath 2023-09-06T09:47:34,888 copying build/lib/neurots/morphmath/utils.py -> build/bdist.linux-armv7l/wheel/neurots/morphmath 2023-09-06T09:47:34,889 running install_egg_info 2023-09-06T09:47:34,898 Copying NeuroTS.egg-info to build/bdist.linux-armv7l/wheel/NeuroTS-3.4.1-py3.9.egg-info 2023-09-06T09:47:34,907 running install_scripts 2023-09-06T09:47:34,930 creating build/bdist.linux-armv7l/wheel/NeuroTS-3.4.1.dist-info/WHEEL 2023-09-06T09:47:34,933 creating '/tmp/pip-wheel-3nknr_d8/.tmp-niyvh1v3/NeuroTS-3.4.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-06T09:47:34,936 adding 'neurots/__init__.py' 2023-09-06T09:47:34,938 adding 'neurots/basic.py' 2023-09-06T09:47:34,939 adding 'neurots/utils.py' 2023-09-06T09:47:34,940 adding 'neurots/validator.py' 2023-09-06T09:47:34,942 adding 'neurots/astrocyte/__init__.py' 2023-09-06T09:47:34,944 adding 'neurots/astrocyte/context.py' 2023-09-06T09:47:34,946 adding 'neurots/astrocyte/grower.py' 2023-09-06T09:47:34,948 adding 'neurots/astrocyte/point_cloud.py' 2023-09-06T09:47:34,950 adding 'neurots/astrocyte/section.py' 2023-09-06T09:47:34,952 adding 'neurots/astrocyte/space_colonization.py' 2023-09-06T09:47:34,954 adding 'neurots/astrocyte/tmd_utils.py' 2023-09-06T09:47:34,955 adding 'neurots/astrocyte/tree.py' 2023-09-06T09:47:34,957 adding 'neurots/extract_input/__init__.py' 2023-09-06T09:47:34,958 adding 'neurots/extract_input/from_TMD.py' 2023-09-06T09:47:34,960 adding 'neurots/extract_input/from_diameter.py' 2023-09-06T09:47:34,962 adding 'neurots/extract_input/from_neurom.py' 2023-09-06T09:47:34,963 adding 'neurots/extract_input/input_distributions.py' 2023-09-06T09:47:34,965 adding 'neurots/extract_input/input_parameters.py' 2023-09-06T09:47:34,967 adding 'neurots/generate/__init__.py' 2023-09-06T09:47:34,969 adding 'neurots/generate/diametrizer.py' 2023-09-06T09:47:34,972 adding 'neurots/generate/grower.py' 2023-09-06T09:47:34,975 adding 'neurots/generate/orientations.py' 2023-09-06T09:47:34,977 adding 'neurots/generate/section.py' 2023-09-06T09:47:34,979 adding 'neurots/generate/soma.py' 2023-09-06T09:47:34,981 adding 'neurots/generate/tree.py' 2023-09-06T09:47:34,983 adding 'neurots/generate/algorithms/__init__.py' 2023-09-06T09:47:34,984 adding 'neurots/generate/algorithms/abstractgrower.py' 2023-09-06T09:47:34,986 adding 'neurots/generate/algorithms/barcode.py' 2023-09-06T09:47:34,987 adding 'neurots/generate/algorithms/basicgrower.py' 2023-09-06T09:47:34,989 adding 'neurots/generate/algorithms/common.py' 2023-09-06T09:47:34,991 adding 'neurots/generate/algorithms/tmdgrower.py' 2023-09-06T09:47:34,993 adding 'neurots/morphmath/__init__.py' 2023-09-06T09:47:34,994 adding 'neurots/morphmath/bifurcation.py' 2023-09-06T09:47:34,995 adding 'neurots/morphmath/point_array.py' 2023-09-06T09:47:34,997 adding 'neurots/morphmath/rotation.py' 2023-09-06T09:47:34,998 adding 'neurots/morphmath/sample.py' 2023-09-06T09:47:35,000 adding 'neurots/morphmath/utils.py' 2023-09-06T09:47:35,001 adding 'neurots/preprocess/__init__.py' 2023-09-06T09:47:35,003 adding 'neurots/preprocess/exceptions.py' 2023-09-06T09:47:35,004 adding 'neurots/preprocess/preprocessors.py' 2023-09-06T09:47:35,005 adding 'neurots/preprocess/relevance_checkers.py' 2023-09-06T09:47:35,006 adding 'neurots/preprocess/utils.py' 2023-09-06T09:47:35,008 adding 'neurots/preprocess/validity_checkers.py' 2023-09-06T09:47:35,010 adding 'neurots/schemas/distributions.json' 2023-09-06T09:47:35,012 adding 'neurots/schemas/parameters.json' 2023-09-06T09:47:35,013 adding 'NeuroTS-3.4.1.dist-info/AUTHORS.md' 2023-09-06T09:47:35,019 adding 'NeuroTS-3.4.1.dist-info/LICENSE.txt' 2023-09-06T09:47:35,021 adding 'NeuroTS-3.4.1.dist-info/METADATA' 2023-09-06T09:47:35,022 adding 'NeuroTS-3.4.1.dist-info/WHEEL' 2023-09-06T09:47:35,022 adding 'NeuroTS-3.4.1.dist-info/top_level.txt' 2023-09-06T09:47:35,024 adding 'NeuroTS-3.4.1.dist-info/RECORD' 2023-09-06T09:47:35,027 removing build/bdist.linux-armv7l/wheel 2023-09-06T09:47:35,124 Building wheel for neurots (pyproject.toml): finished with status 'done' 2023-09-06T09:47:35,132 Created wheel for neurots: filename=NeuroTS-3.4.1-py3-none-any.whl size=105177 sha256=1c51f191d52f7ea07648d22c147077443e5a01192f6e8379d1619ede845746ae 2023-09-06T09:47:35,133 Stored in directory: /tmp/pip-ephem-wheel-cache-mksccu1h/wheels/f0/9f/b8/51e64bd79d96e2359728997c8563f6faf02724043685169d81 2023-09-06T09:47:35,146 Successfully built neurots 2023-09-06T09:47:35,152 Removed build tracker: '/tmp/pip-build-tracker-4cd0ll7g'