2023-09-07T19:12:22,955 Created temporary directory: /tmp/pip-build-tracker-_pevb18d 2023-09-07T19:12:22,956 Initialized build tracking at /tmp/pip-build-tracker-_pevb18d 2023-09-07T19:12:22,956 Created build tracker: /tmp/pip-build-tracker-_pevb18d 2023-09-07T19:12:22,956 Entered build tracker: /tmp/pip-build-tracker-_pevb18d 2023-09-07T19:12:22,957 Created temporary directory: /tmp/pip-wheel-mubqoydu 2023-09-07T19:12:22,961 Created temporary directory: /tmp/pip-ephem-wheel-cache-syuw9xn5 2023-09-07T19:12:22,985 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-07T19:12:22,988 2 location(s) to search for versions of ukat: 2023-09-07T19:12:22,988 * https://pypi.org/simple/ukat/ 2023-09-07T19:12:22,988 * https://www.piwheels.org/simple/ukat/ 2023-09-07T19:12:22,989 Fetching project page and analyzing links: https://pypi.org/simple/ukat/ 2023-09-07T19:12:22,989 Getting page https://pypi.org/simple/ukat/ 2023-09-07T19:12:22,991 Found index url https://pypi.org/simple/ 2023-09-07T19:12:23,044 Fetched page https://pypi.org/simple/ukat/ as application/vnd.pypi.simple.v1+json 2023-09-07T19:12:23,049 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/e2/17/e636a5c965c555fb1b44799974932f6a017c92e4fcdc9219c48fc786d31d/ukat-0.2.2-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-09-07T19:12:23,050 Found link https://files.pythonhosted.org/packages/22/53/a958fc50ec0ebefd577a91de3a8aef339e2031cc4c23eb2c9fcac30d1d61/ukat-0.2.2.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.2.2 2023-09-07T19:12:23,050 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/97/e2/f46b3aaaf3868bb93d8bbe0e978f4e357985cd266d8ad07af798148eb947/ukat-0.3.0rc1-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-09-07T19:12:23,051 Found link https://files.pythonhosted.org/packages/9f/f4/3ea611a5facc3bf586f9f6e25254b5be789e0eb3fee9ee900095566d6b8d/ukat-0.3.0rc1.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0rc1 2023-09-07T19:12:23,051 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/07/18/55b4246dcf95f9adf756e8b33f7f35ebd610860ae2a390b6a2903ec8ba67/ukat-0.3.0rc2-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-09-07T19:12:23,052 Found link https://files.pythonhosted.org/packages/87/c0/b51d733d00dfa0374ccdf51ef00fc37a4f287716d35296420caadcb201ab/ukat-0.3.0rc2.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0rc2 2023-09-07T19:12:23,052 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/75/3e/d5efff7dadb6aa91c239b7a8fe50f2f9290ef83c7f0a5aa7a61294e9e46e/ukat-0.3.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-09-07T19:12:23,053 Found link https://files.pythonhosted.org/packages/c9/7c/60d85dfa350e8b06deb7ad6304eae25b6546541dadce2f15677f034f477f/ukat-0.3.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0 2023-09-07T19:12:23,053 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/00/18/6a5221095c9bb0d6e168185eefca2e6af00d4f8e4f76c4337998cd780fa2/ukat-0.4.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-09-07T19:12:23,054 Found link https://files.pythonhosted.org/packages/c7/ff/bc77453bf46cc5184dbbf5b840243a0ae0941dc410a1d03b063d79aafb06/ukat-0.4.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.4.0 2023-09-07T19:12:23,054 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/49/f0/71b5c598d65f94ae4679d0dd9289610c9667ae5c652b47246df61a861f80/ukat-0.5.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4) 2023-09-07T19:12:23,055 Found link https://files.pythonhosted.org/packages/09/e0/d0bc4a72616c3147123a42f0f2df3d70f5c913f83e93a585818f5a3e485d/ukat-0.5.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4), version: 0.5.0 2023-09-07T19:12:23,055 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/75/2c/2a0af3be5b46d79ec35ddd9961662ecb9b5f501bbf5215bc4e7a6064b5bd/ukat-0.6.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4) 2023-09-07T19:12:23,056 Found link https://files.pythonhosted.org/packages/e7/60/e74811775704c302673cd28b3669efdbcb5cd35780d89c5b18069cdb387a/ukat-0.6.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4), version: 0.6.0 2023-09-07T19:12:23,056 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/4b/22/cc8a211608efaad7ee71fa6409ec13fc59ed8edf4c7d2d1a06dd2d70e036/ukat-0.6.1-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-09-07T19:12:23,057 Found link https://files.pythonhosted.org/packages/df/4b/9a3ab2bfa9ef5988e590b5ee6b31b18eab33a4ecc3c8aed091c6add6aacd/ukat-0.6.1.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.1 2023-09-07T19:12:23,057 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/be/62/a915276e1511bc65a0dc4180ef170962967e6f972c58a57a64e3ad0474e0/ukat-0.6.2-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-09-07T19:12:23,058 Found link https://files.pythonhosted.org/packages/ff/2a/19315dfeeebb202d6761e86e70a87752435eefd0b5d642b690629b64f704/ukat-0.6.2.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.2 2023-09-07T19:12:23,058 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/9c/71/e782f90624fa37a2d6c14a03f8fa69bac8e724c7b0e34b547a4969bc98fb/ukat-0.6.3-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-09-07T19:12:23,059 Found link https://files.pythonhosted.org/packages/4f/02/8b2f31c2be7d67a0d682629ed6cf9715855f729a6cc80d71af2821d0345d/ukat-0.6.3.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.3 2023-09-07T19:12:23,059 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/32/1a/f0534c14ceec33bfd8193b3f6b012db9c342757766e8890adf1970f2fd1b/ukat-0.6.4-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-09-07T19:12:23,059 Found link https://files.pythonhosted.org/packages/e3/40/86a511bc0a0b9c1de877fe30e3a2a8a760bc97d111c065e0fedea435f2d0/ukat-0.6.4.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.4 2023-09-07T19:12:23,060 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/f0/e2/dadfa3620b6febf2c497470fbe27c6347bea3a28df3304040f6909750c07/ukat-0.6.5-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-09-07T19:12:23,060 Found link https://files.pythonhosted.org/packages/ed/b7/9382a687dda7fc40a414bb2c8451459921af78da1d232ad4deb9477077cd/ukat-0.6.5.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.5 2023-09-07T19:12:23,061 Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/4c/83/45ee3964041d87898130cc8ac7e2fce356fdfa261b79778e8a46dfb674e2/ukat-0.7.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-09-07T19:12:23,061 Found link https://files.pythonhosted.org/packages/e4/8d/e33039e61e7e224ff6a164119d764dcf2def3f76181e9b7802871bc88849/ukat-0.7.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.7.0 2023-09-07T19:12:23,062 Fetching project page and analyzing links: https://www.piwheels.org/simple/ukat/ 2023-09-07T19:12:23,062 Getting page https://www.piwheels.org/simple/ukat/ 2023-09-07T19:12:23,063 Found index url https://www.piwheels.org/simple/ 2023-09-07T19:12:23,220 Fetched page https://www.piwheels.org/simple/ukat/ as text/html 2023-09-07T19:12:23,225 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.5-py3-none-any.whl#sha256=686daac8761ca477949cfeb3ac3c31c36a3aab6fe277893c09dccdfe04d25f0f (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-09-07T19:12:23,225 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.4-py3-none-any.whl#sha256=5009f9a41fa9e635b2b381e49387fbc0ebee0d9222ac9cb78f9e6ebeff8fc226 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-09-07T19:12:23,225 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.3-py3-none-any.whl#sha256=5ddc013291e2d74f3f64a22c888c300cdabbc893b6cf514d4c7bf97df8be14a6 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-09-07T19:12:23,226 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.2-py3-none-any.whl#sha256=a831cd11993de2b4c1c722e0294a13bb3e6d1da09b5ebe3c300307759d10cf02 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-09-07T19:12:23,226 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.1-py3-none-any.whl#sha256=7d16a51c8a1b641c0e66a07b621739800aeee67a63bca23aae04440ea692a180 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4) 2023-09-07T19:12:23,226 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.0-py3-none-any.whl#sha256=78508823e1a39cce9fafca7bf4ffafbb572a5e42dcaf146988e55f7baba8b6d9 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.7, <4) 2023-09-07T19:12:23,226 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.5.0-py3-none-any.whl#sha256=9e0351fe436360177b7b038d5bf70ed992a0bdeba76f9fb2208a78e6d2660e9a (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.7, <4) 2023-09-07T19:12:23,226 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.4.0-py3-none-any.whl#sha256=4439c434b8639dfd1a636d19d1e1ffabd28bebee6dfb40517215a1f794dd2e4f (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-09-07T19:12:23,227 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0-py3-none-any.whl#sha256=86022839d769d6086bb361a5b243063582b7f1a9c5a3a48dabd57d74c9777832 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-09-07T19:12:23,227 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0rc2-py3-none-any.whl#sha256=3c5b41e81cd4a6ca5e350db15e9f750e78fe1f480545fb2d403cdfcbe8047fc9 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-09-07T19:12:23,227 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0rc1-py3-none-any.whl#sha256=cc765ecd35f48365da5fc3ab75b324011d33ec523fd325bf72715951ea5e1140 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-09-07T19:12:23,227 Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.2.2-py3-none-any.whl#sha256=a15e3619c507894ee5d4801e5f059fbb21c89d110b6eaf5c7ec385d98cfc3f05 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4) 2023-09-07T19:12:23,227 Skipping link: not a file: https://www.piwheels.org/simple/ukat/ 2023-09-07T19:12:23,228 Skipping link: not a file: https://pypi.org/simple/ukat/ 2023-09-07T19:12:23,246 Given no hashes to check 1 links for project 'ukat': discarding no candidates 2023-09-07T19:12:23,263 Collecting ukat==0.7.0 2023-09-07T19:12:23,265 Created temporary directory: /tmp/pip-unpack-2_enkipo 2023-09-07T19:12:23,431 Downloading ukat-0.7.0.tar.gz (82 kB) 2023-09-07T19:12:23,631 Added ukat==0.7.0 from https://files.pythonhosted.org/packages/e4/8d/e33039e61e7e224ff6a164119d764dcf2def3f76181e9b7802871bc88849/ukat-0.7.0.tar.gz to build tracker '/tmp/pip-build-tracker-_pevb18d' 2023-09-07T19:12:23,633 Running setup.py (path:/tmp/pip-wheel-mubqoydu/ukat_e8a53ba37bc846019b76feb9a8eff9df/setup.py) egg_info for package ukat 2023-09-07T19:12:23,633 Created temporary directory: /tmp/pip-pip-egg-info-ts00yoav 2023-09-07T19:12:23,634 Preparing metadata (setup.py): started 2023-09-07T19:12:23,635 Running command python setup.py egg_info 2023-09-07T19:12:24,239 running egg_info 2023-09-07T19:12:24,240 creating /tmp/pip-pip-egg-info-ts00yoav/ukat.egg-info 2023-09-07T19:12:24,267 writing /tmp/pip-pip-egg-info-ts00yoav/ukat.egg-info/PKG-INFO 2023-09-07T19:12:24,269 writing dependency_links to /tmp/pip-pip-egg-info-ts00yoav/ukat.egg-info/dependency_links.txt 2023-09-07T19:12:24,271 writing requirements to /tmp/pip-pip-egg-info-ts00yoav/ukat.egg-info/requires.txt 2023-09-07T19:12:24,272 writing top-level names to /tmp/pip-pip-egg-info-ts00yoav/ukat.egg-info/top_level.txt 2023-09-07T19:12:24,273 writing manifest file '/tmp/pip-pip-egg-info-ts00yoav/ukat.egg-info/SOURCES.txt' 2023-09-07T19:12:24,359 reading manifest file '/tmp/pip-pip-egg-info-ts00yoav/ukat.egg-info/SOURCES.txt' 2023-09-07T19:12:24,361 reading manifest template 'MANIFEST.in' 2023-09-07T19:12:24,373 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2023-09-07T19:12:24,374 no previously-included directories found matching 'doc' 2023-09-07T19:12:24,375 no previously-included directories found matching 'experiments' 2023-09-07T19:12:24,375 adding license file 'LICENSE' 2023-09-07T19:12:24,378 writing manifest file '/tmp/pip-pip-egg-info-ts00yoav/ukat.egg-info/SOURCES.txt' 2023-09-07T19:12:24,438 Preparing metadata (setup.py): finished with status 'done' 2023-09-07T19:12:24,444 Source in /tmp/pip-wheel-mubqoydu/ukat_e8a53ba37bc846019b76feb9a8eff9df has version 0.7.0, which satisfies requirement ukat==0.7.0 from https://files.pythonhosted.org/packages/e4/8d/e33039e61e7e224ff6a164119d764dcf2def3f76181e9b7802871bc88849/ukat-0.7.0.tar.gz 2023-09-07T19:12:24,444 Removed ukat==0.7.0 from https://files.pythonhosted.org/packages/e4/8d/e33039e61e7e224ff6a164119d764dcf2def3f76181e9b7802871bc88849/ukat-0.7.0.tar.gz from build tracker '/tmp/pip-build-tracker-_pevb18d' 2023-09-07T19:12:24,451 Created temporary directory: /tmp/pip-unpack-nwx3bgrl 2023-09-07T19:12:24,452 Building wheels for collected packages: ukat 2023-09-07T19:12:24,456 Created temporary directory: /tmp/pip-wheel-u84ff8xk 2023-09-07T19:12:24,457 Building wheel for ukat (setup.py): started 2023-09-07T19:12:24,458 Destination directory: /tmp/pip-wheel-u84ff8xk 2023-09-07T19:12:24,458 Running command python setup.py bdist_wheel 2023-09-07T19:12:25,091 running bdist_wheel 2023-09-07T19:12:25,376 running build 2023-09-07T19:12:25,376 running build_py 2023-09-07T19:12:25,405 creating build 2023-09-07T19:12:25,405 creating build/lib 2023-09-07T19:12:25,406 creating build/lib/ukat 2023-09-07T19:12:25,407 copying ukat/__init__.py -> build/lib/ukat 2023-09-07T19:12:25,409 creating build/lib/ukat/vessels 2023-09-07T19:12:25,410 copying ukat/vessels/__init__.py -> build/lib/ukat/vessels 2023-09-07T19:12:25,411 copying ukat/vessels/phase_contrast.py -> build/lib/ukat/vessels 2023-09-07T19:12:25,414 creating build/lib/ukat/utils 2023-09-07T19:12:25,415 copying ukat/utils/arraystats.py -> build/lib/ukat/utils 2023-09-07T19:12:25,418 copying ukat/utils/siemens.py -> build/lib/ukat/utils 2023-09-07T19:12:25,420 copying ukat/utils/tools.py -> build/lib/ukat/utils 2023-09-07T19:12:25,422 copying ukat/utils/ge.py -> build/lib/ukat/utils 2023-09-07T19:12:25,423 copying ukat/utils/__init__.py -> build/lib/ukat/utils 2023-09-07T19:12:25,425 creating build/lib/ukat/qa 2023-09-07T19:12:25,426 copying ukat/qa/snr.py -> build/lib/ukat/qa 2023-09-07T19:12:25,428 copying ukat/qa/__init__.py -> build/lib/ukat/qa 2023-09-07T19:12:25,430 creating build/lib/ukat/segmentation 2023-09-07T19:12:25,431 copying ukat/segmentation/__init__.py -> build/lib/ukat/segmentation 2023-09-07T19:12:25,433 copying ukat/segmentation/whole_kidney.py -> build/lib/ukat/segmentation 2023-09-07T19:12:25,435 creating build/lib/ukat/data 2023-09-07T19:12:25,436 copying ukat/data/fetch.py -> build/lib/ukat/data 2023-09-07T19:12:25,440 copying ukat/data/__init__.py -> build/lib/ukat/data 2023-09-07T19:12:25,442 creating build/lib/ukat/mapping 2023-09-07T19:12:25,443 copying ukat/mapping/diffusion.py -> build/lib/ukat/mapping 2023-09-07T19:12:25,446 copying ukat/mapping/t2_stimfit.py -> build/lib/ukat/mapping 2023-09-07T19:12:25,448 copying ukat/mapping/t1.py -> build/lib/ukat/mapping 2023-09-07T19:12:25,451 copying ukat/mapping/t2.py -> build/lib/ukat/mapping 2023-09-07T19:12:25,453 copying ukat/mapping/b0.py -> build/lib/ukat/mapping 2023-09-07T19:12:25,455 copying ukat/mapping/__init__.py -> build/lib/ukat/mapping 2023-09-07T19:12:25,456 copying ukat/mapping/t2star.py -> build/lib/ukat/mapping 2023-09-07T19:12:25,459 copying ukat/mapping/mtr.py -> build/lib/ukat/mapping 2023-09-07T19:12:25,461 creating build/lib/ukat/vessels/tests 2023-09-07T19:12:25,462 copying ukat/vessels/tests/test_phase_contrast.py -> build/lib/ukat/vessels/tests 2023-09-07T19:12:25,464 copying ukat/vessels/tests/__init__.py -> build/lib/ukat/vessels/tests 2023-09-07T19:12:25,466 creating build/lib/ukat/utils/tests 2023-09-07T19:12:25,467 copying ukat/utils/tests/test_tools.py -> build/lib/ukat/utils/tests 2023-09-07T19:12:25,469 copying ukat/utils/tests/test_ge.py -> build/lib/ukat/utils/tests 2023-09-07T19:12:25,471 copying ukat/utils/tests/__init__.py -> build/lib/ukat/utils/tests 2023-09-07T19:12:25,472 copying ukat/utils/tests/test_siemens.py -> build/lib/ukat/utils/tests 2023-09-07T19:12:25,474 copying ukat/utils/tests/test_arraystats.py -> build/lib/ukat/utils/tests 2023-09-07T19:12:25,476 creating build/lib/ukat/qa/tests 2023-09-07T19:12:25,477 copying ukat/qa/tests/test_snr.py -> build/lib/ukat/qa/tests 2023-09-07T19:12:25,480 copying ukat/qa/tests/__init__.py -> build/lib/ukat/qa/tests 2023-09-07T19:12:25,482 creating build/lib/ukat/segmentation/tests 2023-09-07T19:12:25,482 copying ukat/segmentation/tests/test_whole_kidney.py -> build/lib/ukat/segmentation/tests 2023-09-07T19:12:25,485 copying ukat/segmentation/tests/__init__.py -> build/lib/ukat/segmentation/tests 2023-09-07T19:12:25,487 creating build/lib/ukat/data/tests 2023-09-07T19:12:25,487 copying ukat/data/tests/__init__.py -> build/lib/ukat/data/tests 2023-09-07T19:12:25,489 copying ukat/data/tests/test_fetch.py -> build/lib/ukat/data/tests 2023-09-07T19:12:25,492 creating build/lib/ukat/mapping/tests 2023-09-07T19:12:25,493 copying ukat/mapping/tests/test_b0.py -> build/lib/ukat/mapping/tests 2023-09-07T19:12:25,495 copying ukat/mapping/tests/test_t1.py -> build/lib/ukat/mapping/tests 2023-09-07T19:12:25,497 copying ukat/mapping/tests/test_t2star.py -> build/lib/ukat/mapping/tests 2023-09-07T19:12:25,499 copying ukat/mapping/tests/test_mtr.py -> build/lib/ukat/mapping/tests 2023-09-07T19:12:25,501 copying ukat/mapping/tests/test_t2.py -> build/lib/ukat/mapping/tests 2023-09-07T19:12:25,504 copying ukat/mapping/tests/test_diffusion.py -> build/lib/ukat/mapping/tests 2023-09-07T19:12:25,507 copying ukat/mapping/tests/test_t2_stimfit.py -> build/lib/ukat/mapping/tests 2023-09-07T19:12:25,509 copying ukat/mapping/tests/__init__.py -> build/lib/ukat/mapping/tests 2023-09-07T19:12:25,511 creating build/lib/ukat/mapping/fitting 2023-09-07T19:12:25,512 copying ukat/mapping/fitting/relaxation.py -> build/lib/ukat/mapping/fitting 2023-09-07T19:12:25,514 copying ukat/mapping/fitting/__init__.py -> build/lib/ukat/mapping/fitting 2023-09-07T19:12:25,516 creating build/lib/ukat/mapping/fitting/tests 2023-09-07T19:12:25,517 copying ukat/mapping/fitting/tests/test_relaxation.py -> build/lib/ukat/mapping/fitting/tests 2023-09-07T19:12:25,519 copying ukat/mapping/fitting/tests/__init__.py -> build/lib/ukat/mapping/fitting/tests 2023-09-07T19:12:25,520 running egg_info 2023-09-07T19:12:25,579 writing ukat.egg-info/PKG-INFO 2023-09-07T19:12:25,581 writing dependency_links to ukat.egg-info/dependency_links.txt 2023-09-07T19:12:25,583 writing requirements to ukat.egg-info/requires.txt 2023-09-07T19:12:25,584 writing top-level names to ukat.egg-info/top_level.txt 2023-09-07T19:12:25,619 reading manifest file 'ukat.egg-info/SOURCES.txt' 2023-09-07T19:12:25,621 reading manifest template 'MANIFEST.in' 2023-09-07T19:12:25,646 warning: no previously-included files matching '__pycache__' found anywhere in distribution 2023-09-07T19:12:25,646 no previously-included directories found matching 'doc' 2023-09-07T19:12:25,647 no previously-included directories found matching 'experiments' 2023-09-07T19:12:25,647 adding license file 'LICENSE' 2023-09-07T19:12:25,651 writing manifest file 'ukat.egg-info/SOURCES.txt' 2023-09-07T19:12:25,655 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'ukat.utils.tests.test_data' is absent from the `packages` configuration. 2023-09-07T19:12:25,655 !! 2023-09-07T19:12:25,656 ******************************************************************************** 2023-09-07T19:12:25,656 ############################ 2023-09-07T19:12:25,656 # Package would be ignored # 2023-09-07T19:12:25,656 ############################ 2023-09-07T19:12:25,656 Python recognizes 'ukat.utils.tests.test_data' as an importable package[^1], 2023-09-07T19:12:25,656 but it is absent from setuptools' `packages` configuration. 2023-09-07T19:12:25,657 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-07T19:12:25,657 package, please make sure that 'ukat.utils.tests.test_data' is explicitly added 2023-09-07T19:12:25,657 to the `packages` configuration field. 2023-09-07T19:12:25,657 Alternatively, you can also rely on setuptools' discovery methods 2023-09-07T19:12:25,657 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-07T19:12:25,657 instead of `find_packages(...)`/`find:`). 2023-09-07T19:12:25,658 You can read more about "package discovery" on setuptools documentation page: 2023-09-07T19:12:25,658 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-07T19:12:25,658 If you don't want 'ukat.utils.tests.test_data' to be distributed and are 2023-09-07T19:12:25,658 already explicitly excluding 'ukat.utils.tests.test_data' via 2023-09-07T19:12:25,658 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-07T19:12:25,658 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-07T19:12:25,659 combination with a more fine grained `package-data` configuration. 2023-09-07T19:12:25,659 You can read more about "package data files" on setuptools documentation page: 2023-09-07T19:12:25,659 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-07T19:12:25,660 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-07T19:12:25,660 even if it does not contain any `.py` files. 2023-09-07T19:12:25,660 On the other hand, currently there is no concept of package data 2023-09-07T19:12:25,660 directory, all directories are treated like packages. 2023-09-07T19:12:25,660 ******************************************************************************** 2023-09-07T19:12:25,660 !! 2023-09-07T19:12:25,660 check.warn(importable) 2023-09-07T19:12:25,661 creating build/lib/ukat/utils/tests/test_data 2023-09-07T19:12:25,661 copying ukat/utils/tests/test_data/diffusion_scheme.txt -> build/lib/ukat/utils/tests/test_data 2023-09-07T19:12:25,661 copying ukat/utils/tests/test_data/expected_from_str.dvs -> build/lib/ukat/utils/tests/test_data 2023-09-07T19:12:25,662 copying ukat/utils/tests/test_data/expected_from_txt.dvs -> build/lib/ukat/utils/tests/test_data 2023-09-07T19:12:25,699 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-09-07T19:12:25,700 !! 2023-09-07T19:12:25,700 ******************************************************************************** 2023-09-07T19:12:25,700 Please avoid running ``setup.py`` directly. 2023-09-07T19:12:25,700 Instead, use pypa/build, pypa/installer, pypa/build or 2023-09-07T19:12:25,700 other standards-based tools. 2023-09-07T19:12:25,700 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-09-07T19:12:25,701 ******************************************************************************** 2023-09-07T19:12:25,701 !! 2023-09-07T19:12:25,701 self.initialize_options() 2023-09-07T19:12:25,726 installing to build/bdist.linux-armv7l/wheel 2023-09-07T19:12:25,726 running install 2023-09-07T19:12:25,751 running install_lib 2023-09-07T19:12:25,777 creating build/bdist.linux-armv7l 2023-09-07T19:12:25,778 creating build/bdist.linux-armv7l/wheel 2023-09-07T19:12:25,779 creating build/bdist.linux-armv7l/wheel/ukat 2023-09-07T19:12:25,780 creating build/bdist.linux-armv7l/wheel/ukat/vessels 2023-09-07T19:12:25,781 creating build/bdist.linux-armv7l/wheel/ukat/vessels/tests 2023-09-07T19:12:25,782 copying build/lib/ukat/vessels/tests/test_phase_contrast.py -> build/bdist.linux-armv7l/wheel/ukat/vessels/tests 2023-09-07T19:12:25,785 copying build/lib/ukat/vessels/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/vessels/tests 2023-09-07T19:12:25,786 copying build/lib/ukat/vessels/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/vessels 2023-09-07T19:12:25,788 copying build/lib/ukat/vessels/phase_contrast.py -> build/bdist.linux-armv7l/wheel/ukat/vessels 2023-09-07T19:12:25,790 creating build/bdist.linux-armv7l/wheel/ukat/utils 2023-09-07T19:12:25,791 copying build/lib/ukat/utils/arraystats.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2023-09-07T19:12:25,793 copying build/lib/ukat/utils/siemens.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2023-09-07T19:12:25,796 creating build/bdist.linux-armv7l/wheel/ukat/utils/tests 2023-09-07T19:12:25,797 creating build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2023-09-07T19:12:25,798 copying build/lib/ukat/utils/tests/test_data/expected_from_str.dvs -> build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2023-09-07T19:12:25,800 copying build/lib/ukat/utils/tests/test_data/diffusion_scheme.txt -> build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2023-09-07T19:12:25,801 copying build/lib/ukat/utils/tests/test_data/expected_from_txt.dvs -> build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data 2023-09-07T19:12:25,803 copying build/lib/ukat/utils/tests/test_tools.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2023-09-07T19:12:25,805 copying build/lib/ukat/utils/tests/test_ge.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2023-09-07T19:12:25,807 copying build/lib/ukat/utils/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2023-09-07T19:12:25,809 copying build/lib/ukat/utils/tests/test_siemens.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2023-09-07T19:12:25,810 copying build/lib/ukat/utils/tests/test_arraystats.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests 2023-09-07T19:12:25,813 copying build/lib/ukat/utils/tools.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2023-09-07T19:12:25,815 copying build/lib/ukat/utils/ge.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2023-09-07T19:12:25,816 copying build/lib/ukat/utils/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/utils 2023-09-07T19:12:25,818 creating build/bdist.linux-armv7l/wheel/ukat/qa 2023-09-07T19:12:25,819 copying build/lib/ukat/qa/snr.py -> build/bdist.linux-armv7l/wheel/ukat/qa 2023-09-07T19:12:25,821 creating build/bdist.linux-armv7l/wheel/ukat/qa/tests 2023-09-07T19:12:25,822 copying build/lib/ukat/qa/tests/test_snr.py -> build/bdist.linux-armv7l/wheel/ukat/qa/tests 2023-09-07T19:12:25,824 copying build/lib/ukat/qa/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/qa/tests 2023-09-07T19:12:25,826 copying build/lib/ukat/qa/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/qa 2023-09-07T19:12:25,827 creating build/bdist.linux-armv7l/wheel/ukat/segmentation 2023-09-07T19:12:25,828 creating build/bdist.linux-armv7l/wheel/ukat/segmentation/tests 2023-09-07T19:12:25,829 copying build/lib/ukat/segmentation/tests/test_whole_kidney.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation/tests 2023-09-07T19:12:25,832 copying build/lib/ukat/segmentation/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation/tests 2023-09-07T19:12:25,833 copying build/lib/ukat/segmentation/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation 2023-09-07T19:12:25,835 copying build/lib/ukat/segmentation/whole_kidney.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation 2023-09-07T19:12:25,837 creating build/bdist.linux-armv7l/wheel/ukat/data 2023-09-07T19:12:25,838 creating build/bdist.linux-armv7l/wheel/ukat/data/tests 2023-09-07T19:12:25,839 copying build/lib/ukat/data/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/data/tests 2023-09-07T19:12:25,840 copying build/lib/ukat/data/tests/test_fetch.py -> build/bdist.linux-armv7l/wheel/ukat/data/tests 2023-09-07T19:12:25,843 copying build/lib/ukat/data/fetch.py -> build/bdist.linux-armv7l/wheel/ukat/data 2023-09-07T19:12:25,846 copying build/lib/ukat/data/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/data 2023-09-07T19:12:25,847 copying build/lib/ukat/__init__.py -> build/bdist.linux-armv7l/wheel/ukat 2023-09-07T19:12:25,849 creating build/bdist.linux-armv7l/wheel/ukat/mapping 2023-09-07T19:12:25,850 copying build/lib/ukat/mapping/diffusion.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2023-09-07T19:12:25,852 copying build/lib/ukat/mapping/t2_stimfit.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2023-09-07T19:12:25,855 creating build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2023-09-07T19:12:25,856 copying build/lib/ukat/mapping/tests/test_b0.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2023-09-07T19:12:25,858 copying build/lib/ukat/mapping/tests/test_t1.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2023-09-07T19:12:25,861 copying build/lib/ukat/mapping/tests/test_t2star.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2023-09-07T19:12:25,863 copying build/lib/ukat/mapping/tests/test_mtr.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2023-09-07T19:12:25,865 copying build/lib/ukat/mapping/tests/test_t2.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2023-09-07T19:12:25,867 copying build/lib/ukat/mapping/tests/test_diffusion.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2023-09-07T19:12:25,870 copying build/lib/ukat/mapping/tests/test_t2_stimfit.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2023-09-07T19:12:25,872 copying build/lib/ukat/mapping/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests 2023-09-07T19:12:25,873 copying build/lib/ukat/mapping/t1.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2023-09-07T19:12:25,876 copying build/lib/ukat/mapping/t2.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2023-09-07T19:12:25,878 copying build/lib/ukat/mapping/b0.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2023-09-07T19:12:25,880 creating build/bdist.linux-armv7l/wheel/ukat/mapping/fitting 2023-09-07T19:12:25,881 copying build/lib/ukat/mapping/fitting/relaxation.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/fitting 2023-09-07T19:12:25,883 creating build/bdist.linux-armv7l/wheel/ukat/mapping/fitting/tests 2023-09-07T19:12:25,884 copying build/lib/ukat/mapping/fitting/tests/test_relaxation.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/fitting/tests 2023-09-07T19:12:25,886 copying build/lib/ukat/mapping/fitting/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/fitting/tests 2023-09-07T19:12:25,888 copying build/lib/ukat/mapping/fitting/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/fitting 2023-09-07T19:12:25,889 copying build/lib/ukat/mapping/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2023-09-07T19:12:25,891 copying build/lib/ukat/mapping/t2star.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2023-09-07T19:12:25,893 copying build/lib/ukat/mapping/mtr.py -> build/bdist.linux-armv7l/wheel/ukat/mapping 2023-09-07T19:12:25,895 running install_egg_info 2023-09-07T19:12:25,925 Copying ukat.egg-info to build/bdist.linux-armv7l/wheel/ukat-0.7.0-py3.9.egg-info 2023-09-07T19:12:25,934 running install_scripts 2023-09-07T19:12:25,953 creating build/bdist.linux-armv7l/wheel/ukat-0.7.0.dist-info/WHEEL 2023-09-07T19:12:25,956 creating '/tmp/pip-wheel-u84ff8xk/ukat-0.7.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-07T19:12:25,958 adding 'ukat/__init__.py' 2023-09-07T19:12:25,959 adding 'ukat/data/__init__.py' 2023-09-07T19:12:25,963 adding 'ukat/data/fetch.py' 2023-09-07T19:12:25,965 adding 'ukat/data/tests/__init__.py' 2023-09-07T19:12:25,967 adding 'ukat/data/tests/test_fetch.py' 2023-09-07T19:12:25,968 adding 'ukat/mapping/__init__.py' 2023-09-07T19:12:25,970 adding 'ukat/mapping/b0.py' 2023-09-07T19:12:25,972 adding 'ukat/mapping/diffusion.py' 2023-09-07T19:12:25,974 adding 'ukat/mapping/mtr.py' 2023-09-07T19:12:25,977 adding 'ukat/mapping/t1.py' 2023-09-07T19:12:25,978 adding 'ukat/mapping/t2.py' 2023-09-07T19:12:25,982 adding 'ukat/mapping/t2_stimfit.py' 2023-09-07T19:12:25,984 adding 'ukat/mapping/t2star.py' 2023-09-07T19:12:25,986 adding 'ukat/mapping/fitting/__init__.py' 2023-09-07T19:12:25,987 adding 'ukat/mapping/fitting/relaxation.py' 2023-09-07T19:12:25,989 adding 'ukat/mapping/fitting/tests/__init__.py' 2023-09-07T19:12:25,990 adding 'ukat/mapping/fitting/tests/test_relaxation.py' 2023-09-07T19:12:25,992 adding 'ukat/mapping/tests/__init__.py' 2023-09-07T19:12:25,994 adding 'ukat/mapping/tests/test_b0.py' 2023-09-07T19:12:25,995 adding 'ukat/mapping/tests/test_diffusion.py' 2023-09-07T19:12:25,997 adding 'ukat/mapping/tests/test_mtr.py' 2023-09-07T19:12:25,999 adding 'ukat/mapping/tests/test_t1.py' 2023-09-07T19:12:26,001 adding 'ukat/mapping/tests/test_t2.py' 2023-09-07T19:12:26,002 adding 'ukat/mapping/tests/test_t2_stimfit.py' 2023-09-07T19:12:26,004 adding 'ukat/mapping/tests/test_t2star.py' 2023-09-07T19:12:26,006 adding 'ukat/qa/__init__.py' 2023-09-07T19:12:26,007 adding 'ukat/qa/snr.py' 2023-09-07T19:12:26,009 adding 'ukat/qa/tests/__init__.py' 2023-09-07T19:12:26,010 adding 'ukat/qa/tests/test_snr.py' 2023-09-07T19:12:26,012 adding 'ukat/segmentation/__init__.py' 2023-09-07T19:12:26,013 adding 'ukat/segmentation/whole_kidney.py' 2023-09-07T19:12:26,015 adding 'ukat/segmentation/tests/__init__.py' 2023-09-07T19:12:26,016 adding 'ukat/segmentation/tests/test_whole_kidney.py' 2023-09-07T19:12:26,018 adding 'ukat/utils/__init__.py' 2023-09-07T19:12:26,020 adding 'ukat/utils/arraystats.py' 2023-09-07T19:12:26,021 adding 'ukat/utils/ge.py' 2023-09-07T19:12:26,023 adding 'ukat/utils/siemens.py' 2023-09-07T19:12:26,024 adding 'ukat/utils/tools.py' 2023-09-07T19:12:26,026 adding 'ukat/utils/tests/__init__.py' 2023-09-07T19:12:26,028 adding 'ukat/utils/tests/test_arraystats.py' 2023-09-07T19:12:26,029 adding 'ukat/utils/tests/test_ge.py' 2023-09-07T19:12:26,030 adding 'ukat/utils/tests/test_siemens.py' 2023-09-07T19:12:26,032 adding 'ukat/utils/tests/test_tools.py' 2023-09-07T19:12:26,033 adding 'ukat/utils/tests/test_data/diffusion_scheme.txt' 2023-09-07T19:12:26,035 adding 'ukat/utils/tests/test_data/expected_from_str.dvs' 2023-09-07T19:12:26,036 adding 'ukat/utils/tests/test_data/expected_from_txt.dvs' 2023-09-07T19:12:26,037 adding 'ukat/vessels/__init__.py' 2023-09-07T19:12:26,039 adding 'ukat/vessels/phase_contrast.py' 2023-09-07T19:12:26,041 adding 'ukat/vessels/tests/__init__.py' 2023-09-07T19:12:26,043 adding 'ukat/vessels/tests/test_phase_contrast.py' 2023-09-07T19:12:26,049 adding 'ukat-0.7.0.dist-info/LICENSE' 2023-09-07T19:12:26,051 adding 'ukat-0.7.0.dist-info/METADATA' 2023-09-07T19:12:26,052 adding 'ukat-0.7.0.dist-info/WHEEL' 2023-09-07T19:12:26,053 adding 'ukat-0.7.0.dist-info/top_level.txt' 2023-09-07T19:12:26,054 adding 'ukat-0.7.0.dist-info/RECORD' 2023-09-07T19:12:26,057 removing build/bdist.linux-armv7l/wheel 2023-09-07T19:12:26,154 Building wheel for ukat (setup.py): finished with status 'done' 2023-09-07T19:12:26,158 Created wheel for ukat: filename=ukat-0.7.0-py3-none-any.whl size=101877 sha256=0b9e53fa4cf8f414352932c0314514ec12c48d386396aa1e43bb7a00a6e991ad 2023-09-07T19:12:26,159 Stored in directory: /tmp/pip-ephem-wheel-cache-syuw9xn5/wheels/c1/da/a5/f8f3212ceb7170ae93d112ff4916758c5bf22bdc5f865fa004 2023-09-07T19:12:26,172 Successfully built ukat 2023-09-07T19:12:26,178 Removed build tracker: '/tmp/pip-build-tracker-_pevb18d'