2023-09-08T10:54:07,411 Created temporary directory: /tmp/pip-build-tracker-8s39kgpu 2023-09-08T10:54:07,412 Initialized build tracking at /tmp/pip-build-tracker-8s39kgpu 2023-09-08T10:54:07,413 Created build tracker: /tmp/pip-build-tracker-8s39kgpu 2023-09-08T10:54:07,413 Entered build tracker: /tmp/pip-build-tracker-8s39kgpu 2023-09-08T10:54:07,414 Created temporary directory: /tmp/pip-wheel-84eu9jsd 2023-09-08T10:54:07,417 Created temporary directory: /tmp/pip-ephem-wheel-cache-8yb06g_a 2023-09-08T10:54:07,439 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-08T10:54:07,443 2 location(s) to search for versions of biopython: 2023-09-08T10:54:07,443 * https://pypi.org/simple/biopython/ 2023-09-08T10:54:07,443 * https://www.piwheels.org/simple/biopython/ 2023-09-08T10:54:07,444 Fetching project page and analyzing links: https://pypi.org/simple/biopython/ 2023-09-08T10:54:07,445 Getting page https://pypi.org/simple/biopython/ 2023-09-08T10:54:07,446 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2023-09-08T10:54:07,720 Found link https://files.pythonhosted.org/packages/72/04/73a4bb22fed40eed26c7e1a673ab51778c577afc3d5dd6f1256424a62c35/biopython-1.70.tar.gz (from https://pypi.org/simple/biopython/), version: 1.70 2023-09-08T10:54:07,721 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/63/0e/321c84b1a21a9715455fdd7a9fc64558f4cd7013db22fae001cfbbdf0be1/biopython-1.71-cp27-cp27m-macosx_10_6_intel.macosx_10_9_intel.macosx_10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,721 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/21/be/11b1820bc9f3a7ada50008fa83c7b70ac1d44d6d890c539ea76ba44a7741/biopython-1.71-cp27-cp27m-manylinux1_i686.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,722 Skipping link: No binaries permitted for biopython: 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2023-09-08T10:54:07,725 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/1b/ef/f7cf92ae477994031a39d72f0a6314afaf1be96c6718dd0c7854b979e56c/biopython-1.71-cp27-cp27mu-manylinux1_x86_64.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,725 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/37/22/b6ebf283a70e5fe42265b63b9db4ed9a20e213de90c5bf25d1cf036493d4/biopython-1.71-cp34-cp34m-macosx_10_6_intel.macosx_10_9_intel.macosx_10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,726 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/fd/43/7510174e0f7b9842bc93a2324c35f2f84181498eb720a333c703d0ebf127/biopython-1.71-cp34-cp34m-manylinux1_i686.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,727 Skipping link: No binaries permitted for biopython: 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2023-09-08T10:54:07,735 Found link https://files.pythonhosted.org/packages/55/43/475388b2c27d7b1ae56cf7c7ff14e987ef7b41c2ebf78842493aad6799ac/biopython-1.71.tar.gz (from https://pypi.org/simple/biopython/), version: 1.71 2023-09-08T10:54:07,736 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/b3/a2/db0c332584cee4ab3438e2316be6e8b65785e202b41e44fc9af2452d0965/biopython-1.72-cp27-cp27m-macosx_10_6_intel.macosx_10_9_intel.macosx_10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,737 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/d8/0b/9bdcc0b19b6933cab67b2c3ac618470b5b14f72f0c1c5c4f2f8b68512723/biopython-1.72-cp27-cp27m-manylinux1_i686.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,738 Skipping link: No binaries permitted for biopython: 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2023-09-08T10:54:07,741 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/e5/3c/1aae19dc685dab77ccd0adfded6bba93821619ad6c57766b349d61cbe61b/biopython-1.72-cp27-cp27mu-manylinux1_x86_64.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,742 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/ee/d6/7559650c25ed92314a0c448f96845bcef7da7eeebf2db6997463f2a9597e/biopython-1.72-cp34-cp34m-macosx_10_6_intel.macosx_10_9_intel.macosx_10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,743 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/50/91/d08bf20a80fafcbd07721137559fe2899141d2260072c9c6b6693a5033e8/biopython-1.72-cp34-cp34m-manylinux1_i686.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,744 Skipping link: No binaries permitted for biopython: 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2023-09-08T10:54:07,752 Found link https://files.pythonhosted.org/packages/f0/3c/ab5783b5d2cb4ed566abcd9335e90b13ff57c4fcc93fd08bda5dfded2fdc/biopython-1.72.tar.gz (from https://pypi.org/simple/biopython/), version: 1.72 2023-09-08T10:54:07,752 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/a0/fd/6ccbfe72c6ba14c1dec3b93e0441228b650c82d74f0270e4b785600d66d4/biopython-1.73-cp27-cp27m-macosx_10_6_intel.macosx_10_9_intel.macosx_10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,753 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/0d/d1/3467dd6f15caf315a5819806373f213f0f7467d56ccd530de3a351a586eb/biopython-1.73-cp27-cp27m-manylinux1_i686.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,753 Skipping link: No binaries permitted for biopython: 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2023-09-08T10:54:07,756 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/19/4e/ac487da685e947c56fafd10b2a04c6a09f0051c2e7665a873263f5e303f2/biopython-1.73-cp27-cp27mu-manylinux1_x86_64.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,757 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/fc/43/2678e84db5d38db6e64dfd2ce581c485e036fa3c806f1d9f6c665dee7051/biopython-1.73-cp34-cp34m-macosx_10_6_intel.macosx_10_9_intel.macosx_10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,757 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/58/7c/11ddacbed90a200f60216e6b2abb22c8e462b5612243c6e3a0d816734f70/biopython-1.73-cp34-cp34m-manylinux1_i686.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,758 Skipping link: No binaries permitted for biopython: 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https://files.pythonhosted.org/packages/ce/3b/62b896d2803d261697657ed12181aed45323941bba58ddaa301e28f6871f/biopython-1.73-cp35-cp35m-macosx_10_6_intel.macosx_10_9_intel.macosx_10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,760 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/bd/ee/c3178788e51e3920ffec99cf1832fd3fd8cc46af86473bb5bc18a87c4112/biopython-1.73-cp35-cp35m-manylinux1_i686.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,760 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/3c/5a/05c29e3a75269e00e50779b28b60041d9783ee79054ce53a1d193e05deab/biopython-1.73-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,761 Skipping link: No binaries permitted for biopython: 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https://files.pythonhosted.org/packages/d7/98/22a7c422538013d0934ee63ffe3b6fbdb3981e2891545dee0febfbcc84cb/biopython-1.73-cp36-cp36m-manylinux1_i686.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,764 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/28/15/8ac646ff24cfa2588b4d5e5ea51e8d13f3d35806bd9498fbf40ef79026fd/biopython-1.73-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,764 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/67/50/191791d90b67e30c97cfb09e3544d7dff07daeb397bdbbabfdd4f45d0b2d/biopython-1.73-cp36-cp36m-win32.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,765 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/4f/cb/e27d6d2e71f1b1cea0be357aed599ad24d60a82263989b58a31d0f6cec15/biopython-1.73-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,766 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/f0/6f/388e730f61ca76dbc89885e102d6105124151c3291e8ac0a08be51410afd/biopython-1.73-cp37-cp37m-macosx_10_6_intel.macosx_10_9_intel.macosx_10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,766 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/d7/1f/9465253f01c77626a390814b239d1c4a8aed1c21f8cd5e6e5f439b6a92a4/biopython-1.73-cp37-cp37m-manylinux1_i686.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,767 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/d0/5d/8aedf28541f4936707d78997ebe6d9e25935ae6df6b8f7a045ce294df664/biopython-1.73-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,767 Skipping link: No binaries permitted for biopython: 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2023-09-08T10:54:07,786 Found link https://files.pythonhosted.org/packages/8c/ce/380b3ad1d6653bb7b31b51bb3d4fbe9cced3180fe168acfd9f4e932ab12c/biopython-1.74.tar.gz (from https://pypi.org/simple/biopython/), version: 1.74 2023-09-08T10:54:07,787 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/55/fe/3c1ecd4fa3a4ac1c981ebf948a189d702b77aa842bf879ab460eaaa934ce/biopython-1.75-cp27-cp27m-macosx_10_6_intel.macosx_10_9_intel.macosx_10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,787 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/6d/f6/fdecfb5a4982685b8583bad378406e7eae2c9404c8eb6b1ea70e445263ec/biopython-1.75-cp27-cp27m-manylinux1_i686.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,788 Skipping link: No binaries permitted for biopython: 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2023-09-08T10:54:07,829 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/c6/2b/664691d6d29d136e3442030609a0d1909f3e84698fdc3a423ccd0d585f37/biopython-1.77-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/biopython/) 2023-09-08T10:54:07,829 Found link https://files.pythonhosted.org/packages/3d/2f/d9df24de05d651c5e686ee8fea3afe3985c03ef9ca02f4cc1e7ea10aa31e/biopython-1.77.tar.gz (from https://pypi.org/simple/biopython/), version: 1.77 2023-09-08T10:54:07,830 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/e6/bf/aebd0a64f4f7da64eac8db016289f686fb60dce2e9434b5b9f3e2df6fef4/biopython-1.78-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,831 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/68/1a/07ffb681842e304755dc78abcd1d5d3eface4e7372d0e4c9a5d5de856901/biopython-1.78-cp36-cp36m-manylinux1_i686.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,831 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/76/02/8b606c4aa92ff61b5eda71d23b499ab1de57d5e818be33f77b01a6f435a8/biopython-1.78-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,832 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/aa/7f/1cb072f916999ed1e7393349b782041a3a0e19ce23493f50d0214a026d14/biopython-1.78-cp36-cp36m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,833 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/51/2a/1ec5e043239fdc62ec1eedf47c932458061d79f52ff296fdb0ec76b98fff/biopython-1.78-cp36-cp36m-win32.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,833 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/f5/8c/b0e9fb06f93647de52e0c2da28cbf56605c150e4511b1f963f1e5c889d51/biopython-1.78-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,834 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/19/d9/3d21749fd4cee79f2c1b12cd577ffba458d8c529e13553e7cca6ae6d47aa/biopython-1.78-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,834 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/af/6a/2296a07c1bc978defa6a0db848ac0ccdcbbbc9de2a3bcf8cd5b5864e8934/biopython-1.78-cp37-cp37m-manylinux1_i686.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,835 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/3a/cd/0098eaff841850c01da928c7f509b72fd3e1f51d77b772e24de9e2312471/biopython-1.78-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,835 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/9f/12/2d98ca31667a0cc600e1543604591711bfad9053d3dab2b31cb8bbf3b18d/biopython-1.78-cp37-cp37m-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,836 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/02/3f/8b153be6b4699ee2543b784f36fa8a34bd9160a2d00977a654d26d48f248/biopython-1.78-cp37-cp37m-win32.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,836 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/9d/18/2db178ac5dafad788f694454b57da0aa887aa93e470ee4e41e0099361cb3/biopython-1.78-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,837 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/08/96/587b53614470c2e9890b2dfef10104571cbfd4071cfc0f058f9bc35a9abf/biopython-1.78-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,838 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/01/54/7e7f7b8c30d50426cbdecbb509352278dd3f2c22d6228feab89f60d9e9e3/biopython-1.78-cp38-cp38-manylinux1_i686.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,838 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/58/aa/f9d680e588399a5ef03aaf36a909ad468981171dfb92628bee92c4b204a9/biopython-1.78-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,839 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/57/52/63be91fc9e646f6053db2323f6b3412ccf61a8fd49d64211b8c6a17c7d35/biopython-1.78-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,839 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/10/d9/54704c9186e3ca5c5a9b0bd8cb221b148ac5705cb02771c4c184361ac210/biopython-1.78-cp38-cp38-win32.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,840 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/4a/93/abbc0693692afe90e9f06dfc7b581b069326f7496c31bd0b211cb9cad79e/biopython-1.78-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,841 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/40/1f/37c83872959c6f1283d8589f2e999a10050d97deca37370308d901f118a4/biopython-1.78-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,841 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/01/16/86b2c0f57d3a1f866a58278d3558acdf0c671d77e1d0343b853299cf99e4/biopython-1.78-cp39-cp39-manylinux1_i686.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,842 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/d0/9b/cd1403f36882e69801903b8f945c1dc870a066219fecfec318930fb4aa2d/biopython-1.78-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,842 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/c8/ab/5588aa28bed0d1c9bea87d4a216dc92b5a221661b39304b1b0edf86d3b55/biopython-1.78-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,843 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/93/a5/75876009dec8338a53f492a3ac501e94473ef579ffdf6694579469a93689/biopython-1.78-cp39-cp39-win32.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,843 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/dc/fd/a5072d95fe4031e7c79a9bc91570670ae0991458b591bd66fc0bc23a2aeb/biopython-1.78-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,844 Found link https://files.pythonhosted.org/packages/89/c5/7fe326081276f74a4073f6d6b13cfa7a04ba322a3ff1d84027f4773980b8/biopython-1.78.tar.gz (from https://pypi.org/simple/biopython/) (requires-python:>=3.6), version: 1.78 2023-09-08T10:54:07,845 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/c9/e4/c16225bd0e97de886b4a8a5f1f032b1a8063cc83e151f9b2189f3c81ffa7/biopython-1.79-cp310-cp310-macosx_10_9_x86_64.whl (from 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binaries permitted for biopython: https://files.pythonhosted.org/packages/7a/4a/1c25dd77f9148a58243dfa7dcad92d6faa913d211e54df337394ffd4422f/biopython-1.79-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,848 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/b6/a6/6e73bfa0a297b9884a029d224a8841b44b8dec35f17ceb1ef279d2a7dc76/biopython-1.79-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,849 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/a2/46/b058c3372419edbea9ff0dad9a4ab7a359b360c8d356250326a9015b3c7d/biopython-1.79-cp311-cp311-win32.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,849 Skipping link: No binaries permitted for biopython: 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https://files.pythonhosted.org/packages/5d/57/dd1d704ac67dcf40433da6c97c9aa2b5842e99c26a5dd63ce542f7f00f14/biopython-1.79-cp36-cp36m-manylinux_2_5_i686.manylinux1_i686.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,851 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/ff/58/79e243f219d238441fffc648973731ef5fbdd7caab1a04f2ee4c09bea528/biopython-1.79-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,852 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/ab/dd/13d67536d2cccd2fd8165fd222c63c24e62152243b5965b81a280a1e51ef/biopython-1.79-cp36-cp36m-win32.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,853 Skipping link: No binaries permitted for biopython: 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https://files.pythonhosted.org/packages/4c/83/625b2161c17462c519299d70888ae46e3ec4d40ff7003703d99905d4b2a9/biopython-1.79-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,859 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/cf/ad/291179e20956f589774875e7bb1a80d680a9dd6661a7abb84eca80112815/biopython-1.79-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,859 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/c4/60/799615e4d9d6f514ada83156a74f08008738a635474684d6b2af9ae1cc66/biopython-1.79-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,860 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/d4/26/bd9b0762d4476614227ff909eeb95c1f9b8f126b387e1f41ecc8e895683b/biopython-1.79-cp38-cp38-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,861 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/5e/5d/323de430e020fd3db073502fc02d2db5e3711e7c2e082508d8fecc89e33b/biopython-1.79-cp38-cp38-manylinux_2_5_i686.manylinux1_i686.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,861 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/29/3b/a892a2782334544c379b89943b1d548b7b26b7bb4730561ceb942076b2a7/biopython-1.79-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,862 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/9c/61/dd680f0bada56f1bd4e022e98be912629e66af8994d1874299cc76932ebf/biopython-1.79-cp38-cp38-win32.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,862 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/3d/35/1584ea3e2067655d36f2e98b84704dcad2e91a52a7237fa2598c5cd8b485/biopython-1.79-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,863 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/32/d1/acb7461d41e404232c01ed8762c3807e195d7827787d854d750084dc095e/biopython-1.79-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,864 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/54/8c/275afd0b51d49ade65939de7b2ba40e8c4a37a63466bedf8d16aeb39ed4e/biopython-1.79-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,865 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/e6/e8/730466bd37501619ef0b55b10e98e007ce311e719dbe9c53fcf2b6f43579/biopython-1.79-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,865 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/22/cf/28a0e54dbef63ea356fbecc5c3256be3232fb4bb0a8575e0960aa56dfa09/biopython-1.79-cp39-cp39-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,865 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/c2/14/b1f15781c6ba3597fad6002c1a4999daea32c5fddc05a9ecb315e1fbb0d0/biopython-1.79-cp39-cp39-manylinux_2_5_i686.manylinux1_i686.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,866 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/10/4f/1369f4a2840fdd37402935a59455f0c86a5abfcfdfae37365d8be925661c/biopython-1.79-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,866 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/0b/33/3a6ab331068d831efaafaf056a192268c4f9ee9805d10101bc4e9462a929/biopython-1.79-cp39-cp39-win32.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,867 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/60/da/c67fef644a92c2e44743ad8c3f0321b140e226f2b55112f066a9415c9d91/biopython-1.79-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.6) 2023-09-08T10:54:07,868 Found link https://files.pythonhosted.org/packages/28/73/4d61169ce1f15c65ea49af89e534b2089375a44b608cb65062b58ff414de/biopython-1.79.tar.gz (from https://pypi.org/simple/biopython/) (requires-python:>=3.6), version: 1.79 2023-09-08T10:54:07,869 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/e4/f9/0a85df7917f6cd87d69983a10fc6dcdd090226ff71a15a7b086edea2acd7/biopython-1.80-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,869 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/66/ab/51ef468219008623e96202055949d0e8bb018bb12f5cbdc4f8da34d34765/biopython-1.80-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,870 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/6e/f2/ef58012529de1d3ea401bd3dfa87c5e5c9fb05aa611519ccc18ce6b17ce3/biopython-1.80-cp310-cp310-win32.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,871 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/06/ed/6fbab8be0b4868f5105d76f3ab8b202c1bffd23d43cd422ba485af374b71/biopython-1.80-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,871 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/c0/de/ca9324a7c4991b0d30cf7235d51985cf0efcc05bed6d4780bfe5170c9346/biopython-1.80-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,872 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/97/2c/249d8d97ef86b574147392afb5d53d8e801821bd2e1b84e3c4cab8571345/biopython-1.80-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,873 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/c6/85/2e8078cb2fc2bdaf340a3fa6bd85f53e68c3ce549dbc2e5535be85626888/biopython-1.80-cp311-cp311-win32.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,874 Skipping link: No binaries permitted for biopython: 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https://files.pythonhosted.org/packages/c8/43/c12d7d833e37e9e0e8dffa8710b0507656615932fc7f2d1dde55a13431d2/biopython-1.80-cp37-cp37m-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,876 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/68/a6/50dcd58b63a089c7b838c12c2958d5282488f97b6ce791629eec094f9057/biopython-1.80-cp37-cp37m-win32.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,876 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/f7/28/c2ffd63d61a02b2a61c6b683b969584613f5902cb01a548432667bff0774/biopython-1.80-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,877 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/33/5b/051faf29644418361adb87a424a7bf1e41f0b69d01c27514bc470b87f006/biopython-1.80-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,878 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/3c/1b/28a4c28e9e8fdfa88c7d9feacef5f2af85fe6a2d5fc81fe30f7d227793b5/biopython-1.80-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,878 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/62/06/8236a2f5950fc4a9e74657011e618b50916e29a0645d99881511294497a8/biopython-1.80-cp38-cp38-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,879 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/d9/49/bb2eea7f026fb99a408a94a2958fc6440efe0b85934acea03bc844bd7332/biopython-1.80-cp38-cp38-win32.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,880 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/c9/b9/ede0f39b32b6c0ab97899d5b1e3cd2a9e7dd75b84f6754e386b77945bc37/biopython-1.80-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,880 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/1e/ce/2ba63838f8489bac77b1dbc204eb17a5ef2df51ebbded2f3e2674ecc40c6/biopython-1.80-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,881 Skipping link: No binaries permitted for biopython: 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https://files.pythonhosted.org/packages/2e/f4/c45a5a00036f7bd147270a8bda3925a30cf947b09f9598e44919e0b2b17c/biopython-1.80-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,885 Found link https://files.pythonhosted.org/packages/cb/8d/7cd217252797f7088847d667101b490df5644f0ff5202441e444b2b620ba/biopython-1.80.tar.gz (from https://pypi.org/simple/biopython/) (requires-python:>=3.7), version: 1.80 2023-09-08T10:54:07,885 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/e0/c6/bec6fbc01dfa4157b51c2e3a3c6f253caceac61054c282444106764e9595/biopython-1.81-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,886 Skipping link: No binaries permitted for biopython: 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https://files.pythonhosted.org/packages/bb/39/423f35bf49d94e9a17c9f04a9fa81aa215ece3b2ca60b68febae60ec87aa/biopython-1.81-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,893 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/15/0c/fbc084480b5b4b7fa0734e65a1ed674c16b8629c74e41d246b7a0ea76343/biopython-1.81-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,894 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/88/01/d6dd8a34c3a1dc8e1c12f27a7aadb13f069f50c6458fcb69260772897f52/biopython-1.81-cp38-cp38-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,894 Skipping link: No binaries permitted for biopython: 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https://files.pythonhosted.org/packages/c7/f9/b617b085d3d54a44adebb611d54dad7a65ce9d215882f0a63d798cdf47a8/biopython-1.81-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,897 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/3d/99/be029ebd012340c32d16a2ebbadc6149c6192e5b359b0072a5f394e3a003/biopython-1.81-cp39-cp39-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,897 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/1c/db/10d3c1455692119c90999dab0fa63e234be314805cd61e4cd6efee933b98/biopython-1.81-cp39-cp39-win32.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,898 Skipping link: No binaries permitted for biopython: https://files.pythonhosted.org/packages/b7/1e/5fcdf870beec4591d79c82d691de22a2ea742abf282390d4bb386e89dbdb/biopython-1.81-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/biopython/) (requires-python:>=3.7) 2023-09-08T10:54:07,899 Found link https://files.pythonhosted.org/packages/ad/a4/237edd5f5e5b68d9543c79bcd695ef881e6317fbd0eae1b1e53e694f9d54/biopython-1.81.tar.gz (from https://pypi.org/simple/biopython/) (requires-python:>=3.7), version: 1.81 2023-09-08T10:54:07,899 Fetching project page and analyzing links: https://www.piwheels.org/simple/biopython/ 2023-09-08T10:54:07,900 Getting page https://www.piwheels.org/simple/biopython/ 2023-09-08T10:54:07,901 Found index url https://www.piwheels.org/simple/ 2023-09-08T10:54:08,237 Fetched page https://www.piwheels.org/simple/biopython/ as text/html 2023-09-08T10:54:08,275 Skipping link: No binaries permitted for biopython: 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https://www.piwheels.org/simple/biopython/biopython-1.59-cp35-cp35m-linux_armv7l.whl#sha256=374351adb4f000e660e7015a6818a58151f716deb195f15914df0652f502e454 (from https://www.piwheels.org/simple/biopython/) 2023-09-08T10:54:08,365 Skipping link: No binaries permitted for biopython: https://www.piwheels.org/simple/biopython/biopython-1.59-cp35-cp35m-linux_armv6l.whl#sha256=374351adb4f000e660e7015a6818a58151f716deb195f15914df0652f502e454 (from https://www.piwheels.org/simple/biopython/) 2023-09-08T10:54:08,366 Skipping link: No binaries permitted for biopython: https://www.piwheels.org/simple/biopython/biopython-1.58-cp39-cp39-linux_armv7l.whl#sha256=5dda7d88264a364a76b4e2d5ba4d9e11bdaa48eb771d468954720e522b24f7ae (from https://www.piwheels.org/simple/biopython/) 2023-09-08T10:54:08,366 Skipping link: No binaries permitted for biopython: https://www.piwheels.org/simple/biopython/biopython-1.58-cp39-cp39-linux_armv6l.whl#sha256=5dda7d88264a364a76b4e2d5ba4d9e11bdaa48eb771d468954720e522b24f7ae (from https://www.piwheels.org/simple/biopython/) 2023-09-08T10:54:08,367 Skipping link: not a file: https://www.piwheels.org/simple/biopython/ 2023-09-08T10:54:08,367 Skipping link: not a file: https://pypi.org/simple/biopython/ 2023-09-08T10:54:08,391 Given no hashes to check 1 links for project 'biopython': discarding no candidates 2023-09-08T10:54:08,412 Collecting biopython==1.61 2023-09-08T10:54:08,415 Created temporary directory: /tmp/pip-unpack-sdieos09 2023-09-08T10:54:09,066 Downloading biopython-1.61.tar.gz (10.6 MB) 2023-09-08T10:54:15,291 Added biopython==1.61 from https://files.pythonhosted.org/packages/4a/da/4bf81ee31f187553fd12381635dc47d14747817c9196e388cf56209f275e/biopython-1.61.tar.gz to build tracker '/tmp/pip-build-tracker-8s39kgpu' 2023-09-08T10:54:15,293 Running setup.py (path:/tmp/pip-wheel-84eu9jsd/biopython_9f392708bca64d7e8acf2f26c94e6aca/setup.py) egg_info for package biopython 2023-09-08T10:54:15,294 Created temporary directory: /tmp/pip-pip-egg-info-oe5corwc 2023-09-08T10:54:15,295 Preparing metadata (setup.py): started 2023-09-08T10:54:15,296 Running command python setup.py egg_info 2023-09-08T10:56:46,914 WARNING - Biopython does not yet officially support Python 3 2023-09-08T10:56:46,915 The 2to3 library will be called automatically now, 2023-09-08T10:56:46,916 and the converted files cached under build/py3.11 2023-09-08T10:56:46,916 Processing Bio 2023-09-08T10:56:46,917 Have 331 python files to convert 2023-09-08T10:56:46,917 Converting build/py3.11/Bio/MaxEntropy.py 2023-09-08T10:56:46,918 Converting build/py3.11/Bio/ParserSupport.py 2023-09-08T10:56:46,918 Converting build/py3.11/Bio/pairwise2.py 2023-09-08T10:56:46,919 Converting build/py3.11/Bio/SeqFeature.py 2023-09-08T10:56:46,920 Converting build/py3.11/Bio/LogisticRegression.py 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Converting build/py3.11/Bio/Align/Applications/_Mafft.py 2023-09-08T10:59:01,373 Converting build/py3.11/Bio/Align/Applications/_Prank.py 2023-09-08T10:59:01,373 Converting build/py3.11/Bio/Align/Applications/_Probcons.py 2023-09-08T10:59:01,373 Converting build/py3.11/Bio/Align/Applications/_Muscle.py 2023-09-08T10:59:01,374 Converting build/py3.11/Bio/Align/Applications/_Dialign.py 2023-09-08T10:59:01,374 Converting build/py3.11/Bio/Wise/psw.py 2023-09-08T10:59:01,375 Converting build/py3.11/Bio/Wise/__init__.py 2023-09-08T10:59:01,375 Converting build/py3.11/Bio/Wise/dnal.py 2023-09-08T10:59:01,376 Converting build/py3.11/Bio/SVDSuperimposer/__init__.py 2023-09-08T10:59:01,376 Converting build/py3.11/Bio/SVDSuperimposer/SVDSuperimposer.py 2023-09-08T10:59:01,376 Converting build/py3.11/Bio/Crystal/__init__.py 2023-09-08T10:59:01,377 Converting build/py3.11/Bio/SeqUtils/__init__.py 2023-09-08T10:59:01,377 Converting build/py3.11/Bio/SeqUtils/MeltingTemp.py 2023-09-08T10:59:01,378 Converting build/py3.11/Bio/SeqUtils/ProtParam.py 2023-09-08T10:59:01,378 Converting build/py3.11/Bio/SeqUtils/lcc.py 2023-09-08T10:59:01,379 Converting build/py3.11/Bio/SeqUtils/CodonUsageIndices.py 2023-09-08T10:59:01,379 Converting build/py3.11/Bio/SeqUtils/CodonUsage.py 2023-09-08T10:59:01,380 Converting build/py3.11/Bio/SeqUtils/CheckSum.py 2023-09-08T10:59:01,381 Converting build/py3.11/Bio/SeqUtils/IsoelectricPoint.py 2023-09-08T10:59:01,381 Converting build/py3.11/Bio/SeqUtils/ProtParamData.py 2023-09-08T10:59:01,382 Converting build/py3.11/Bio/Geo/__init__.py 2023-09-08T10:59:01,382 Converting build/py3.11/Bio/Geo/Record.py 2023-09-08T10:59:01,383 Converting build/py3.11/Bio/Sequencing/__init__.py 2023-09-08T10:59:01,383 Converting build/py3.11/Bio/Sequencing/Ace.py 2023-09-08T10:59:01,384 Converting build/py3.11/Bio/Sequencing/Phd.py 2023-09-08T10:59:01,385 Converting build/py3.11/Bio/Sequencing/Applications/__init__.py 2023-09-08T10:59:01,385 Converting build/py3.11/Bio/Sequencing/Applications/_Novoalign.py 2023-09-08T10:59:01,386 Converting build/py3.11/Bio/PDB/Model.py 2023-09-08T10:59:01,386 Converting build/py3.11/Bio/PDB/FragmentMapper.py 2023-09-08T10:59:01,387 Converting build/py3.11/Bio/PDB/PDBParser.py 2023-09-08T10:59:01,388 Converting build/py3.11/Bio/PDB/parse_pdb_header.py 2023-09-08T10:59:01,388 Converting build/py3.11/Bio/PDB/Polypeptide.py 2023-09-08T10:59:01,389 Converting build/py3.11/Bio/PDB/DSSP.py 2023-09-08T10:59:01,389 Converting build/py3.11/Bio/PDB/NACCESS.py 2023-09-08T10:59:01,390 Converting build/py3.11/Bio/PDB/NeighborSearch.py 2023-09-08T10:59:01,390 Converting build/py3.11/Bio/PDB/Dice.py 2023-09-08T10:59:01,391 Converting build/py3.11/Bio/PDB/__init__.py 2023-09-08T10:59:01,392 Converting build/py3.11/Bio/PDB/Entity.py 2023-09-08T10:59:01,392 Converting build/py3.11/Bio/PDB/ResidueDepth.py 2023-09-08T10:59:01,393 Converting build/py3.11/Bio/PDB/Selection.py 2023-09-08T10:59:01,393 Converting build/py3.11/Bio/PDB/Vector.py 2023-09-08T10:59:01,394 Converting build/py3.11/Bio/PDB/PDBIO.py 2023-09-08T10:59:01,395 Converting build/py3.11/Bio/PDB/PDBExceptions.py 2023-09-08T10:59:01,395 Converting build/py3.11/Bio/PDB/StructureAlignment.py 2023-09-08T10:59:01,396 Converting build/py3.11/Bio/PDB/Residue.py 2023-09-08T10:59:01,396 Converting build/py3.11/Bio/PDB/Chain.py 2023-09-08T10:59:01,397 Converting build/py3.11/Bio/PDB/PDBList.py 2023-09-08T10:59:01,398 Converting build/py3.11/Bio/PDB/Structure.py 2023-09-08T10:59:01,398 Converting build/py3.11/Bio/PDB/AbstractPropertyMap.py 2023-09-08T10:59:01,399 Converting build/py3.11/Bio/PDB/MMCIFParser.py 2023-09-08T10:59:01,399 Converting build/py3.11/Bio/PDB/MMCIF2Dict.py 2023-09-08T10:59:01,399 Converting build/py3.11/Bio/PDB/Atom.py 2023-09-08T10:59:01,400 Converting build/py3.11/Bio/PDB/Superimposer.py 2023-09-08T10:59:01,400 Converting build/py3.11/Bio/PDB/HSExposure.py 2023-09-08T10:59:01,401 Converting build/py3.11/Bio/PDB/PSEA.py 2023-09-08T10:59:01,401 Converting build/py3.11/Bio/PDB/StructureBuilder.py 2023-09-08T10:59:01,401 Converting build/py3.11/Bio/PDB/mmCIF/__init__.py 2023-09-08T10:59:01,402 Converting build/py3.11/Bio/Pathway/__init__.py 2023-09-08T10:59:01,402 Converting build/py3.11/Bio/Pathway/Rep/__init__.py 2023-09-08T10:59:01,403 Converting build/py3.11/Bio/Pathway/Rep/HashSet.py 2023-09-08T10:59:01,403 Converting build/py3.11/Bio/Pathway/Rep/Graph.py 2023-09-08T10:59:01,404 Converting build/py3.11/Bio/Pathway/Rep/MultiGraph.py 2023-09-08T10:59:01,404 Converting build/py3.11/Bio/NMR/__init__.py 2023-09-08T10:59:01,404 Converting build/py3.11/Bio/NMR/NOEtools.py 2023-09-08T10:59:01,405 Converting build/py3.11/Bio/NMR/xpktools.py 2023-09-08T10:59:01,405 Converting build/py3.11/Bio/FSSP/__init__.py 2023-09-08T10:59:01,406 Converting build/py3.11/Bio/FSSP/fssp_rec.py 2023-09-08T10:59:01,406 Converting build/py3.11/Bio/FSSP/FSSPTools.py 2023-09-08T10:59:01,407 Converting build/py3.11/Bio/TogoWS/__init__.py 2023-09-08T10:59:01,407 Converting build/py3.11/Bio/Statistics/__init__.py 2023-09-08T10:59:01,408 Converting build/py3.11/Bio/Statistics/lowess.py 2023-09-08T10:59:01,408 Converting build/py3.11/Bio/Phylo/_io.py 2023-09-08T10:59:01,409 Converting build/py3.11/Bio/Phylo/__init__.py 2023-09-08T10:59:01,409 Converting build/py3.11/Bio/Phylo/BaseTree.py 2023-09-08T10:59:01,410 Converting build/py3.11/Bio/Phylo/NexusIO.py 2023-09-08T10:59:01,410 Converting build/py3.11/Bio/Phylo/_utils.py 2023-09-08T10:59:01,411 Converting build/py3.11/Bio/Phylo/Newick.py 2023-09-08T10:59:01,412 Converting build/py3.11/Bio/Phylo/PhyloXML.py 2023-09-08T10:59:01,412 Converting build/py3.11/Bio/Phylo/PhyloXMLIO.py 2023-09-08T10:59:01,413 Converting build/py3.11/Bio/Phylo/NewickIO.py 2023-09-08T10:59:01,414 Converting build/py3.11/Bio/Phylo/PAML/_parse_yn00.py 2023-09-08T10:59:01,414 Converting build/py3.11/Bio/Phylo/PAML/__init__.py 2023-09-08T10:59:01,415 Converting build/py3.11/Bio/Phylo/PAML/codeml.py 2023-09-08T10:59:01,415 Converting build/py3.11/Bio/Phylo/PAML/baseml.py 2023-09-08T10:59:01,416 Converting build/py3.11/Bio/Phylo/PAML/_paml.py 2023-09-08T10:59:01,417 Converting build/py3.11/Bio/Phylo/PAML/yn00.py 2023-09-08T10:59:01,417 Converting build/py3.11/Bio/Phylo/PAML/_parse_codeml.py 2023-09-08T10:59:01,418 Converting build/py3.11/Bio/Phylo/PAML/_parse_baseml.py 2023-09-08T10:59:01,418 Converting build/py3.11/Bio/Phylo/PAML/chi2.py 2023-09-08T10:59:01,419 Converting build/py3.11/Bio/Phylo/Applications/_Raxml.py 2023-09-08T10:59:01,419 Converting build/py3.11/Bio/Phylo/Applications/__init__.py 2023-09-08T10:59:01,420 Converting build/py3.11/Bio/Phylo/Applications/_Phyml.py 2023-09-08T10:59:01,420 Converting build/py3.11/Bio/PopGen/__init__.py 2023-09-08T10:59:01,421 Converting build/py3.11/Bio/PopGen/Async/__init__.py 2023-09-08T10:59:01,421 Converting build/py3.11/Bio/PopGen/Async/Local.py 2023-09-08T10:59:01,422 Converting build/py3.11/Bio/PopGen/GenePop/__init__.py 2023-09-08T10:59:01,422 Converting build/py3.11/Bio/PopGen/GenePop/FileParser.py 2023-09-08T10:59:01,423 Converting build/py3.11/Bio/PopGen/GenePop/Utils.py 2023-09-08T10:59:01,424 Converting build/py3.11/Bio/PopGen/GenePop/EasyController.py 2023-09-08T10:59:01,424 Converting build/py3.11/Bio/PopGen/GenePop/Controller.py 2023-09-08T10:59:01,425 Converting build/py3.11/Bio/PopGen/GenePop/LargeFileParser.py 2023-09-08T10:59:01,425 Converting build/py3.11/Bio/PopGen/SimCoal/__init__.py 2023-09-08T10:59:01,426 Converting build/py3.11/Bio/PopGen/SimCoal/Template.py 2023-09-08T10:59:01,427 Converting build/py3.11/Bio/PopGen/SimCoal/Cache.py 2023-09-08T10:59:01,427 Converting build/py3.11/Bio/PopGen/SimCoal/Controller.py 2023-09-08T10:59:01,427 Converting build/py3.11/Bio/PopGen/SimCoal/Async.py 2023-09-08T10:59:01,428 Converting build/py3.11/Bio/PopGen/FDist/__init__.py 2023-09-08T10:59:01,428 Converting build/py3.11/Bio/PopGen/FDist/Utils.py 2023-09-08T10:59:01,429 Converting build/py3.11/Bio/PopGen/FDist/Controller.py 2023-09-08T10:59:01,429 Converting build/py3.11/Bio/PopGen/FDist/Async.py 2023-09-08T10:59:01,429 Converting build/py3.11/Bio/motifs/alignace.py 2023-09-08T10:59:01,430 Converting build/py3.11/Bio/motifs/mast.py 2023-09-08T10:59:01,430 Converting build/py3.11/Bio/motifs/__init__.py 2023-09-08T10:59:01,431 Converting build/py3.11/Bio/motifs/transfac.py 2023-09-08T10:59:01,431 Converting build/py3.11/Bio/motifs/meme.py 2023-09-08T10:59:01,431 Converting build/py3.11/Bio/motifs/thresholds.py 2023-09-08T10:59:01,432 Converting build/py3.11/Bio/motifs/matrix.py 2023-09-08T10:59:01,432 Converting build/py3.11/Bio/motifs/jaspar.py 2023-09-08T10:59:01,433 Converting build/py3.11/Bio/motifs/applications/_alignace.py 2023-09-08T10:59:01,433 Converting build/py3.11/Bio/motifs/applications/_xxmotif.py 2023-09-08T10:59:01,434 Converting build/py3.11/Bio/motifs/applications/__init__.py 2023-09-08T10:59:01,434 Converting build/py3.11/Bio/HMM/MarkovModel.py 2023-09-08T10:59:01,434 Converting build/py3.11/Bio/HMM/__init__.py 2023-09-08T10:59:01,435 Converting build/py3.11/Bio/HMM/DynamicProgramming.py 2023-09-08T10:59:01,435 Converting build/py3.11/Bio/HMM/Utilities.py 2023-09-08T10:59:01,436 Converting build/py3.11/Bio/HMM/Trainer.py 2023-09-08T10:59:01,436 Converting build/py3.11/Bio/Cluster/__init__.py 2023-09-08T10:59:01,437 Converting build/py3.11/Bio/Alphabet/__init__.py 2023-09-08T10:59:01,437 Converting build/py3.11/Bio/Alphabet/IUPAC.py 2023-09-08T10:59:01,438 Converting build/py3.11/Bio/Alphabet/Reduced.py 2023-09-08T10:59:01,438 Converting build/py3.11/Bio/SubsMat/__init__.py 2023-09-08T10:59:01,439 Converting build/py3.11/Bio/SubsMat/MatrixInfo.py 2023-09-08T10:59:01,439 Converting build/py3.11/Bio/SubsMat/FreqTable.py 2023-09-08T10:59:01,440 Converting build/py3.11/Bio/Motif/__init__.py 2023-09-08T10:59:01,441 Converting build/py3.11/Bio/Motif/_Motif.py 2023-09-08T10:59:01,441 Converting build/py3.11/Bio/Motif/Thresholds.py 2023-09-08T10:59:01,442 Converting build/py3.11/Bio/Motif/Parsers/MEME.py 2023-09-08T10:59:01,442 Converting build/py3.11/Bio/Motif/Parsers/__init__.py 2023-09-08T10:59:01,443 Converting build/py3.11/Bio/Motif/Parsers/MAST.py 2023-09-08T10:59:01,443 Converting build/py3.11/Bio/Motif/Parsers/AlignAce.py 2023-09-08T10:59:01,444 Converting build/py3.11/Bio/Motif/Applications/_AlignAce.py 2023-09-08T10:59:01,444 Converting build/py3.11/Bio/Motif/Applications/_XXmotif.py 2023-09-08T10:59:01,445 Converting build/py3.11/Bio/Motif/Applications/__init__.py 2023-09-08T10:59:01,445 Converting build/py3.11/Bio/Medline/__init__.py 2023-09-08T10:59:01,446 Converting build/py3.11/Bio/KDTree/__init__.py 2023-09-08T10:59:01,446 Converting build/py3.11/Bio/KDTree/KDTree.py 2023-09-08T11:02:28,318 Converting build/py3.11/Bio/ExPASy/Prodoc.py 2023-09-08T11:02:28,319 Converting build/py3.11/Bio/ExPASy/__init__.py 2023-09-08T11:02:28,320 Converting build/py3.11/Bio/ExPASy/ScanProsite.py 2023-09-08T11:02:28,320 Converting build/py3.11/Bio/ExPASy/Enzyme.py 2023-09-08T11:02:28,321 Converting build/py3.11/Bio/ExPASy/Prosite.py 2023-09-08T11:02:28,321 Converting build/py3.11/Bio/KEGG/__init__.py 2023-09-08T11:02:28,322 Converting build/py3.11/Bio/KEGG/Map/__init__.py 2023-09-08T11:02:28,323 Converting build/py3.11/Bio/KEGG/Compound/__init__.py 2023-09-08T11:02:28,323 Converting build/py3.11/Bio/KEGG/Enzyme/__init__.py 2023-09-08T11:02:28,324 Processing BioSQL 2023-09-08T11:02:28,325 Have 5 python files to convert 2023-09-08T11:02:28,325 Converting build/py3.11/BioSQL/BioSeq.py 2023-09-08T11:02:28,326 Converting build/py3.11/BioSQL/Loader.py 2023-09-08T11:02:28,326 Converting build/py3.11/BioSQL/__init__.py 2023-09-08T11:02:28,327 Converting build/py3.11/BioSQL/DBUtils.py 2023-09-08T11:02:28,327 Converting build/py3.11/BioSQL/BioSeqDatabase.py 2023-09-08T11:02:28,327 Processing Tests 2023-09-08T11:02:28,328 Have 166 python files to convert 2023-09-08T11:02:28,328 Converting build/py3.11/Tests/test_Chi2.py 2023-09-08T11:02:28,329 Converting build/py3.11/Tests/test_PopGen_DFDist.py 2023-09-08T11:02:28,329 Converting build/py3.11/Tests/test_geo.py 2023-09-08T11:02:28,329 Converting build/py3.11/Tests/test_motifs.py 2023-09-08T11:02:28,330 Converting build/py3.11/Tests/test_Motif.py 2023-09-08T11:02:28,330 Converting build/py3.11/Tests/test_GraphicsChromosome.py 2023-09-08T11:02:28,331 Converting build/py3.11/Tests/test_EmbossPhylipNew.py 2023-09-08T11:02:28,331 Converting build/py3.11/Tests/test_Medline.py 2023-09-08T11:02:28,331 Converting build/py3.11/Tests/test_TCoffee_tool.py 2023-09-08T11:02:28,332 Converting build/py3.11/Tests/seq_tests_common.py 2023-09-08T11:02:28,332 Converting build/py3.11/Tests/test_SCOP_Cla.py 2023-09-08T11:02:28,333 Converting build/py3.11/Tests/test_bgzf.py 2023-09-08T11:02:28,333 Converting build/py3.11/Tests/test_GARepair.py 2023-09-08T11:02:28,334 Converting build/py3.11/Tests/test_Mafft_tool.py 2023-09-08T11:02:28,334 Converting build/py3.11/Tests/test_File.py 2023-09-08T11:02:28,335 Converting build/py3.11/Tests/test_Cluster.py 2023-09-08T11:02:28,335 Converting build/py3.11/Tests/test_SubsMat.py 2023-09-08T11:02:28,336 Converting build/py3.11/Tests/test_SeqUtils.py 2023-09-08T11:02:28,336 Converting build/py3.11/Tests/test_NNExclusiveOr.py 2023-09-08T11:02:28,337 Converting build/py3.11/Tests/test_HMMGeneral.py 2023-09-08T11:02:28,338 Converting build/py3.11/Tests/run_tests.py 2023-09-08T11:02:28,338 Converting build/py3.11/Tests/test_SffIO.py 2023-09-08T11:02:28,339 Converting build/py3.11/Tests/test_NNGene.py 2023-09-08T11:02:28,340 Converting build/py3.11/Tests/test_SeqIO_index.py 2023-09-08T11:02:28,340 Converting build/py3.11/Tests/test_PDB.py 2023-09-08T11:02:28,341 Converting build/py3.11/Tests/test_SearchIO_hmmer3_text.py 2023-09-08T11:02:28,341 Converting build/py3.11/Tests/test_ClustalOmega_tool.py 2023-09-08T11:02:28,342 Converting build/py3.11/Tests/test_SwissProt.py 2023-09-08T11:02:28,343 Converting build/py3.11/Tests/test_SVDSuperimposer.py 2023-09-08T11:02:28,343 Converting build/py3.11/Tests/test_Entrez.py 2023-09-08T11:02:28,344 Converting build/py3.11/Tests/test_MMCIF.py 2023-09-08T11:02:28,345 Converting build/py3.11/Tests/test_trie.py 2023-09-08T11:02:28,345 Converting build/py3.11/Tests/test_SearchIO_exonerate_text_index.py 2023-09-08T11:02:28,346 Converting build/py3.11/Tests/test_HMMCasino.py 2023-09-08T11:02:28,347 Converting build/py3.11/Tests/test_SearchIO_fasta_m10_index.py 2023-09-08T11:02:28,347 Converting build/py3.11/Tests/common_BioSQL.py 2023-09-08T11:02:28,348 Converting build/py3.11/Tests/test_KeyWList.py 2023-09-08T11:02:28,349 Converting build/py3.11/Tests/test_SeqRecord.py 2023-09-08T11:02:28,349 Converting build/py3.11/Tests/test_AlignIO.py 2023-09-08T11:02:28,350 Converting build/py3.11/Tests/test_GraphicsDistribution.py 2023-09-08T11:02:28,350 Converting build/py3.11/Tests/requires_wise.py 2023-09-08T11:02:28,351 Converting build/py3.11/Tests/test_SearchIO_hmmer3_domtab_index.py 2023-09-08T11:02:28,352 Converting build/py3.11/Tests/test_FSSP.py 2023-09-08T11:02:28,352 Converting build/py3.11/Tests/test_AlignIO_convert.py 2023-09-08T11:02:28,353 Converting build/py3.11/Tests/test_SearchIO_hmmer3_tab_index.py 2023-09-08T11:02:28,353 Converting build/py3.11/Tests/test_Phylo.py 2023-09-08T11:02:28,354 Converting build/py3.11/Tests/test_py3k.py 2023-09-08T11:02:28,355 Converting build/py3.11/Tests/test_UniGene.py 2023-09-08T11:02:28,356 Converting build/py3.11/Tests/test_Nexus.py 2023-09-08T11:02:28,356 Converting build/py3.11/Tests/test_DocSQL.py 2023-09-08T11:02:28,356 Converting build/py3.11/Tests/test_SearchIO_blast_tab_index.py 2023-09-08T11:02:28,357 Converting build/py3.11/Tests/test_GAOrganism.py 2023-09-08T11:02:28,357 Converting build/py3.11/Tests/test_PopGen_GenePop.py 2023-09-08T11:02:28,358 Converting build/py3.11/Tests/test_SCOP_online.py 2023-09-08T11:02:28,358 Converting build/py3.11/Tests/test_SCOP_Dom.py 2023-09-08T11:02:28,358 Converting build/py3.11/Tests/test_GACrossover.py 2023-09-08T11:02:28,359 Converting build/py3.11/Tests/test_TogoWS.py 2023-09-08T11:02:28,359 Converting build/py3.11/Tests/requires_internet.py 2023-09-08T11:02:28,360 Converting build/py3.11/Tests/test_GAMutation.py 2023-09-08T11:02:28,360 Converting build/py3.11/Tests/test_Phd.py 2023-09-08T11:02:28,361 Converting build/py3.11/Tests/test_SCOP_Residues.py 2023-09-08T11:02:28,361 Converting build/py3.11/Tests/test_LogisticRegression.py 2023-09-08T11:02:28,361 Converting build/py3.11/Tests/test_PopGen_GenePop_nodepend.py 2023-09-08T11:02:28,362 Converting build/py3.11/Tests/test_GenomeDiagram.py 2023-09-08T11:02:28,362 Converting build/py3.11/Tests/test_NCBITextParser.py 2023-09-08T11:02:28,363 Converting build/py3.11/Tests/test_prodoc.py 2023-09-08T11:02:28,363 Converting build/py3.11/Tests/test_KEGG.py 2023-09-08T11:02:28,364 Converting build/py3.11/Tests/test_CodonTable.py 2023-09-08T11:02:28,364 Converting build/py3.11/Tests/test_prosite1.py 2023-09-08T11:02:28,365 Converting build/py3.11/Tests/test_Enzyme.py 2023-09-08T11:02:28,365 Converting build/py3.11/Tests/test_Compass.py 2023-09-08T11:02:28,366 Converting build/py3.11/Tests/test_SearchIO_blat_psl.py 2023-09-08T11:02:28,366 Converting build/py3.11/Tests/test_prosite2.py 2023-09-08T11:02:28,367 Converting build/py3.11/Tests/test_SCOP_Raf.py 2023-09-08T11:02:28,368 Converting build/py3.11/Tests/test_PhyloXML.py 2023-09-08T11:02:28,368 Converting build/py3.11/Tests/test_Pathway.py 2023-09-08T11:02:28,369 Converting build/py3.11/Tests/test_PopGen_FDist_nodepend.py 2023-09-08T11:02:28,369 Converting build/py3.11/Tests/test_PopGen_GenePop_EasyController.py 2023-09-08T11:02:28,370 Converting build/py3.11/Tests/test_SCOP_Des.py 2023-09-08T11:02:28,371 Converting build/py3.11/Tests/test_SeqIO_PdbIO.py 2023-09-08T11:02:28,371 Converting build/py3.11/Tests/test_SeqIO_SeqXML.py 2023-09-08T11:02:28,372 Converting build/py3.11/Tests/test_ColorSpiral.py 2023-09-08T11:02:28,372 Converting build/py3.11/Tests/test_SearchIO_blast_text.py 2023-09-08T11:02:28,373 Converting build/py3.11/Tests/test_SearchIO_model.py 2023-09-08T11:02:28,374 Converting build/py3.11/Tests/test_HotRand.py 2023-09-08T11:02:28,374 Converting build/py3.11/Tests/test_Wise.py 2023-09-08T11:02:28,375 Converting build/py3.11/Tests/test_GenBank.py 2023-09-08T11:02:28,375 Converting build/py3.11/Tests/test_Clustalw_tool.py 2023-09-08T11:02:28,376 Converting build/py3.11/Tests/test_align.py 2023-09-08T11:02:28,376 Converting build/py3.11/Tests/test_psw.py 2023-09-08T11:02:28,377 Converting build/py3.11/Tests/search_tests_common.py 2023-09-08T11:02:28,377 Converting build/py3.11/Tests/test_KDTree.py 2023-09-08T11:02:28,378 Converting build/py3.11/Tests/test_GAQueens.py 2023-09-08T11:02:28,378 Converting build/py3.11/Tests/test_Dialign_tool.py 2023-09-08T11:02:28,379 Converting build/py3.11/Tests/test_PAML_tools.py 2023-09-08T11:02:28,379 Converting build/py3.11/Tests/test_NCBIXML.py 2023-09-08T11:02:28,380 Converting build/py3.11/Tests/test_MarkovModel.py 2023-09-08T11:02:28,381 Converting build/py3.11/Tests/test_phyml_tool.py 2023-09-08T11:02:28,381 Converting build/py3.11/Tests/test_SearchIO_exonerate_vulgar_index.py 2023-09-08T11:02:28,382 Converting build/py3.11/Tests/test_SeqIO_FastaIO.py 2023-09-08T11:02:28,383 Converting build/py3.11/Tests/test_CodonUsage.py 2023-09-08T11:02:28,383 Converting build/py3.11/Tests/test_SeqIO_AbiIO.py 2023-09-08T11:02:28,384 Converting build/py3.11/Tests/test_XXmotif_tool.py 2023-09-08T11:02:28,385 Converting build/py3.11/Tests/test_SCOP_Hie.py 2023-09-08T11:02:28,385 Converting build/py3.11/Tests/test_SearchIO_blast_tab.py 2023-09-08T11:02:28,385 Converting build/py3.11/Tests/test_Ace.py 2023-09-08T11:02:28,386 Converting build/py3.11/Tests/test_Probcons_tool.py 2023-09-08T11:02:28,386 Converting build/py3.11/Tests/test_SeqIO_QualityIO.py 2023-09-08T11:02:28,387 Converting build/py3.11/Tests/test_SearchIO_hmmer3_domtab.py 2023-09-08T11:02:28,387 Converting build/py3.11/Tests/test_NCBI_qblast.py 2023-09-08T11:02:28,387 Converting build/py3.11/Tests/test_Crystal.py 2023-09-08T11:02:28,388 Converting build/py3.11/Tests/test_GASelection.py 2023-09-08T11:02:28,388 Converting build/py3.11/Tests/test_Tutorial.py 2023-09-08T11:02:28,389 Converting build/py3.11/Tests/test_AlignIO_FastaIO.py 2023-09-08T11:02:28,389 Converting build/py3.11/Tests/test_Prank_tool.py 2023-09-08T11:02:28,389 Converting build/py3.11/Tests/test_EmbossPrimer.py 2023-09-08T11:02:28,390 Converting build/py3.11/Tests/test_PAML_codeml.py 2023-09-08T11:02:28,390 Converting build/py3.11/Tests/test_SCOP_Astral.py 2023-09-08T11:02:28,391 Converting build/py3.11/Tests/test_Emboss.py 2023-09-08T11:02:28,391 Converting build/py3.11/Tests/test_GraphicsGeneral.py 2023-09-08T11:02:28,391 Converting build/py3.11/Tests/test_SearchIO_blat_psl_index.py 2023-09-08T11:02:28,392 Converting build/py3.11/Tests/test_NCBI_BLAST_tools.py 2023-09-08T11:02:28,392 Converting build/py3.11/Tests/test_NNGeneral.py 2023-09-08T11:02:28,393 Converting build/py3.11/Tests/test_SeqIO_convert.py 2023-09-08T11:02:28,393 Converting build/py3.11/Tests/test_Muscle_tool.py 2023-09-08T11:02:28,393 Converting build/py3.11/Tests/test_SeqIO_features.py 2023-09-08T11:02:28,394 Converting build/py3.11/Tests/test_Uniprot.py 2023-09-08T11:02:28,395 Converting build/py3.11/Tests/test_PopGen_SimCoal_nodepend.py 2023-09-08T11:02:28,395 Converting build/py3.11/Tests/test_seq.py 2023-09-08T11:02:28,396 Converting build/py3.11/Tests/test_pairwise2.py 2023-09-08T11:02:28,397 Converting build/py3.11/Tests/test_NCBIStandalone.py 2023-09-08T11:02:28,397 Converting build/py3.11/Tests/test_SeqIO.py 2023-09-08T11:02:28,398 Converting build/py3.11/Tests/test_lowess.py 2023-09-08T11:02:28,398 Converting build/py3.11/Tests/test_ParserSupport.py 2023-09-08T11:02:28,399 Converting build/py3.11/Tests/test_translate.py 2023-09-08T11:02:28,400 Converting build/py3.11/Tests/test_Entrez_online.py 2023-09-08T11:02:28,400 Converting build/py3.11/Tests/test_SearchIO_hmmer3_tab.py 2023-09-08T11:02:28,401 Converting build/py3.11/Tests/test_PAML_yn00.py 2023-09-08T11:02:28,401 Converting build/py3.11/Tests/test_PDB_KDTree.py 2023-09-08T11:02:28,402 Converting build/py3.11/Tests/test_SearchIO_hmmer2_text.py 2023-09-08T11:02:28,402 Converting build/py3.11/Tests/test_Location.py 2023-09-08T11:02:28,403 Converting build/py3.11/Tests/test_Seq_objs.py 2023-09-08T11:02:28,403 Converting build/py3.11/Tests/test_SeqIO_online.py 2023-09-08T11:02:28,404 Converting build/py3.11/Tests/test_SearchIO_hmmer3_text_index.py 2023-09-08T11:02:28,404 Converting build/py3.11/Tests/test_Phylo_depend.py 2023-09-08T11:02:28,405 Converting build/py3.11/Tests/test_BioSQL_MySQLdb.py 2023-09-08T11:02:28,406 Converting build/py3.11/Tests/test_raxml_tool.py 2023-09-08T11:02:28,406 Converting build/py3.11/Tests/test_SeqIO_write.py 2023-09-08T11:03:13,865 Converting build/py3.11/Tests/test_PopGen_FDist.py 2023-09-08T11:03:13,865 Converting build/py3.11/Tests/test_kNN.py 2023-09-08T11:03:13,866 Converting build/py3.11/Tests/test_BioSQL_psycopg2.py 2023-09-08T11:03:13,867 Converting build/py3.11/Tests/test_Restriction.py 2023-09-08T11:03:13,869 Converting build/py3.11/Tests/test_CAPS.py 2023-09-08T11:03:13,870 Converting build/py3.11/Tests/test_SearchIO_hmmer2_text_index.py 2023-09-08T11:03:13,871 Converting build/py3.11/Tests/test_PopGen_SimCoal.py 2023-09-08T11:03:13,872 Converting build/py3.11/Tests/test_PAML_baseml.py 2023-09-08T11:03:13,872 Converting build/py3.11/Tests/test_SearchIO_blast_xml.py 2023-09-08T11:03:13,873 Converting build/py3.11/Tests/test_SCOP_Scop.py 2023-09-08T11:03:13,874 Converting build/py3.11/Tests/test_SearchIO_blast_xml_index.py 2023-09-08T11:03:13,875 Converting build/py3.11/Tests/test_SearchIO_write.py 2023-09-08T11:03:13,876 Converting build/py3.11/Tests/test_SearchIO_fasta_m10.py 2023-09-08T11:03:13,877 Converting build/py3.11/Tests/test_GraphicsBitmaps.py 2023-09-08T11:03:13,877 Converting build/py3.11/Tests/test_BioSQL_sqlite3.py 2023-09-08T11:03:13,878 Converting build/py3.11/Tests/test_SearchIO_exonerate.py 2023-09-08T11:03:13,879 Converting build/py3.11/Tests/test_ProtParam.py 2023-09-08T11:03:13,880 Converting build/py3.11/Tests/PAML/gen_results.py 2023-09-08T11:03:13,880 Processing Scripts 2023-09-08T11:03:13,881 Have 22 python files to convert 2023-09-08T11:03:13,882 Converting build/py3.11/Scripts/scop_pdb.py 2023-09-08T11:03:13,883 Converting build/py3.11/Scripts/query_pubmed.py 2023-09-08T11:03:13,883 Converting build/py3.11/Scripts/Restriction/rebase_update.py 2023-09-08T11:03:13,884 Converting build/py3.11/Scripts/Restriction/ranacompiler.py 2023-09-08T11:03:13,885 Converting build/py3.11/Scripts/GenBank/find_parser_problems.py 2023-09-08T11:03:13,886 Converting build/py3.11/Scripts/GenBank/check_output_simple.py 2023-09-08T11:03:13,886 Converting build/py3.11/Scripts/GenBank/check_output.py 2023-09-08T11:03:13,887 Converting build/py3.11/Scripts/Performance/biosql_performance_load.py 2023-09-08T11:03:13,888 Converting build/py3.11/Scripts/Performance/biosql_performance_read.py 2023-09-08T11:03:13,889 Converting build/py3.11/Scripts/debug/debug_blast_parser.py 2023-09-08T11:03:13,889 Converting build/py3.11/Scripts/PDB/generate_three_to_one_dict.py 2023-09-08T11:03:13,890 Converting build/py3.11/Scripts/SeqGui/SeqGui.py 2023-09-08T11:03:13,891 Converting build/py3.11/Scripts/xbbtools/xbb_widget.py 2023-09-08T11:03:13,892 Converting build/py3.11/Scripts/xbbtools/xbb_blastbg.py 2023-09-08T11:03:13,893 Converting build/py3.11/Scripts/xbbtools/xbb_help.py 2023-09-08T11:03:13,894 Converting build/py3.11/Scripts/xbbtools/xbb_search.py 2023-09-08T11:03:13,895 Converting build/py3.11/Scripts/xbbtools/xbb_blast.py 2023-09-08T11:03:13,896 Converting build/py3.11/Scripts/xbbtools/nextorf.py 2023-09-08T11:03:13,897 Converting build/py3.11/Scripts/xbbtools/xbb_translations.py 2023-09-08T11:03:13,898 Converting build/py3.11/Scripts/xbbtools/xbb_utils.py 2023-09-08T11:03:13,899 Converting build/py3.11/Scripts/xbbtools/xbbtools.py 2023-09-08T11:03:13,900 Converting build/py3.11/Scripts/xbbtools/xbb_sequence.py 2023-09-08T11:03:13,901 Processing Doc 2023-09-08T11:03:13,902 Have 11 python files to convert 2023-09-08T11:03:13,903 Converting build/py3.11/Doc/examples/ACT_example.py 2023-09-08T11:03:13,904 Converting build/py3.11/Doc/examples/local_blast.py 2023-09-08T11:03:13,905 Converting build/py3.11/Doc/examples/getgene.py 2023-09-08T11:03:13,905 Converting build/py3.11/Doc/examples/fasta_dictionary.py 2023-09-08T11:03:13,906 Converting build/py3.11/Doc/examples/make_subsmat.py 2023-09-08T11:03:13,907 Converting build/py3.11/Doc/examples/fasta_iterator.py 2023-09-08T11:03:13,908 Converting build/py3.11/Doc/examples/clustal_run.py 2023-09-08T11:03:13,909 Converting build/py3.11/Doc/examples/www_blast.py 2023-09-08T11:03:13,910 Converting build/py3.11/Doc/examples/Proux_et_al_2002_Figure_6.py 2023-09-08T11:03:13,911 Converting build/py3.11/Doc/examples/swissprot.py 2023-09-08T11:03:13,912 Converting build/py3.11/Doc/examples/nmr/simplepredict.py 2023-09-08T11:03:13,913 Python 2to3 processing done. 2023-09-08T11:03:14,002 Preparing metadata (setup.py): finished with status 'done' 2023-09-08T11:03:14,006 Source in /tmp/pip-wheel-84eu9jsd/biopython_9f392708bca64d7e8acf2f26c94e6aca has version 1.61, which satisfies requirement biopython==1.61 from https://files.pythonhosted.org/packages/4a/da/4bf81ee31f187553fd12381635dc47d14747817c9196e388cf56209f275e/biopython-1.61.tar.gz 2023-09-08T11:03:14,007 Removed biopython==1.61 from https://files.pythonhosted.org/packages/4a/da/4bf81ee31f187553fd12381635dc47d14747817c9196e388cf56209f275e/biopython-1.61.tar.gz from build tracker '/tmp/pip-build-tracker-8s39kgpu' 2023-09-08T11:03:14,011 Created temporary directory: /tmp/pip-unpack-8si2dxfe 2023-09-08T11:03:14,012 Created temporary directory: /tmp/pip-unpack-c6myq_hd 2023-09-08T11:03:14,014 Building wheels for collected packages: biopython 2023-09-08T11:03:14,018 Created temporary directory: /tmp/pip-wheel-9frkqqjb 2023-09-08T11:03:14,019 Building wheel for biopython (setup.py): started 2023-09-08T11:03:14,020 Destination directory: /tmp/pip-wheel-9frkqqjb 2023-09-08T11:03:14,020 Running command python setup.py bdist_wheel 2023-09-08T11:03:14,460 WARNING - Biopython does not yet officially support Python 3 2023-09-08T11:03:14,584 The 2to3 library will be called automatically now, 2023-09-08T11:03:14,585 and the converted files cached under build/py3.11 2023-09-08T11:03:14,585 Processing Bio 2023-09-08T11:03:14,745 Processing BioSQL 2023-09-08T11:03:14,746 Processing Tests 2023-09-08T11:03:15,050 Processing Scripts 2023-09-08T11:03:15,062 Processing Doc 2023-09-08T11:03:15,080 Python 2to3 processing done. 2023-09-08T11:03:15,622 running bdist_wheel 2023-09-08T11:03:15,681 running build 2023-09-08T11:03:15,681 running build_py 2023-09-08T11:03:15,683 creating build 2023-09-08T11:03:15,684 creating build/lib.linux-armv7l-cpython-311 2023-09-08T11:03:15,684 creating build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,686 copying Bio/MaxEntropy.py -> build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,688 copying Bio/ParserSupport.py -> build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,690 copying Bio/pairwise2.py -> build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,693 copying Bio/SeqFeature.py -> build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,695 copying Bio/LogisticRegression.py -> build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,697 copying Bio/MarkovModel.py -> build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,699 copying Bio/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,701 copying Bio/Index.py -> build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,703 copying Bio/triefind.py -> build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,705 copying Bio/Seq.py -> build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,708 copying Bio/File.py -> build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,710 copying Bio/kNN.py -> build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,712 copying Bio/NaiveBayes.py -> build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,714 copying Bio/Search.py -> build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,716 copying Bio/SeqRecord.py -> build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,719 copying Bio/_utils.py -> build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,721 copying Bio/HotRand.py -> build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,722 copying Bio/bgzf.py -> build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,725 copying Bio/DocSQL.py -> build/lib.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:15,727 creating build/lib.linux-armv7l-cpython-311/Bio/Align 2023-09-08T11:03:15,728 copying Bio/Align/Generic.py -> build/lib.linux-armv7l-cpython-311/Bio/Align 2023-09-08T11:03:15,731 copying Bio/Align/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Align 2023-09-08T11:03:15,733 copying Bio/Align/AlignInfo.py -> build/lib.linux-armv7l-cpython-311/Bio/Align 2023-09-08T11:03:15,736 creating build/lib.linux-armv7l-cpython-311/Bio/Align/Applications 2023-09-08T11:03:15,737 copying Bio/Align/Applications/_Clustalw.py -> build/lib.linux-armv7l-cpython-311/Bio/Align/Applications 2023-09-08T11:03:15,739 copying Bio/Align/Applications/_ClustalOmega.py -> build/lib.linux-armv7l-cpython-311/Bio/Align/Applications 2023-09-08T11:03:15,741 copying Bio/Align/Applications/_TCoffee.py -> build/lib.linux-armv7l-cpython-311/Bio/Align/Applications 2023-09-08T11:03:15,743 copying Bio/Align/Applications/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Align/Applications 2023-09-08T11:03:15,745 copying Bio/Align/Applications/_Mafft.py -> build/lib.linux-armv7l-cpython-311/Bio/Align/Applications 2023-09-08T11:03:15,747 copying Bio/Align/Applications/_Prank.py -> build/lib.linux-armv7l-cpython-311/Bio/Align/Applications 2023-09-08T11:03:15,749 copying Bio/Align/Applications/_Probcons.py -> build/lib.linux-armv7l-cpython-311/Bio/Align/Applications 2023-09-08T11:03:15,751 copying Bio/Align/Applications/_Muscle.py -> build/lib.linux-armv7l-cpython-311/Bio/Align/Applications 2023-09-08T11:03:15,753 copying Bio/Align/Applications/_Dialign.py -> build/lib.linux-armv7l-cpython-311/Bio/Align/Applications 2023-09-08T11:03:15,756 creating build/lib.linux-armv7l-cpython-311/Bio/AlignIO 2023-09-08T11:03:15,757 copying Bio/AlignIO/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/AlignIO 2023-09-08T11:03:15,759 copying Bio/AlignIO/ClustalIO.py -> build/lib.linux-armv7l-cpython-311/Bio/AlignIO 2023-09-08T11:03:15,761 copying Bio/AlignIO/EmbossIO.py -> build/lib.linux-armv7l-cpython-311/Bio/AlignIO 2023-09-08T11:03:15,764 copying Bio/AlignIO/PhylipIO.py -> build/lib.linux-armv7l-cpython-311/Bio/AlignIO 2023-09-08T11:03:15,766 copying Bio/AlignIO/NexusIO.py -> build/lib.linux-armv7l-cpython-311/Bio/AlignIO 2023-09-08T11:03:15,768 copying Bio/AlignIO/FastaIO.py -> build/lib.linux-armv7l-cpython-311/Bio/AlignIO 2023-09-08T11:03:15,770 copying Bio/AlignIO/StockholmIO.py -> build/lib.linux-armv7l-cpython-311/Bio/AlignIO 2023-09-08T11:03:15,773 copying Bio/AlignIO/Interfaces.py -> build/lib.linux-armv7l-cpython-311/Bio/AlignIO 2023-09-08T11:03:15,775 creating build/lib.linux-armv7l-cpython-311/Bio/Alphabet 2023-09-08T11:03:15,776 copying Bio/Alphabet/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Alphabet 2023-09-08T11:03:15,778 copying Bio/Alphabet/IUPAC.py -> build/lib.linux-armv7l-cpython-311/Bio/Alphabet 2023-09-08T11:03:15,780 copying Bio/Alphabet/Reduced.py -> build/lib.linux-armv7l-cpython-311/Bio/Alphabet 2023-09-08T11:03:15,782 creating build/lib.linux-armv7l-cpython-311/Bio/Application 2023-09-08T11:03:15,783 copying Bio/Application/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Application 2023-09-08T11:03:15,786 creating build/lib.linux-armv7l-cpython-311/Bio/Blast 2023-09-08T11:03:15,787 copying Bio/Blast/NCBIXML.py -> build/lib.linux-armv7l-cpython-311/Bio/Blast 2023-09-08T11:03:15,789 copying Bio/Blast/NCBIStandalone.py -> build/lib.linux-armv7l-cpython-311/Bio/Blast 2023-09-08T11:03:15,793 copying Bio/Blast/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Blast 2023-09-08T11:03:15,795 copying Bio/Blast/Applications.py -> build/lib.linux-armv7l-cpython-311/Bio/Blast 2023-09-08T11:03:15,797 copying Bio/Blast/NCBIWWW.py -> build/lib.linux-armv7l-cpython-311/Bio/Blast 2023-09-08T11:03:15,800 copying Bio/Blast/Record.py -> build/lib.linux-armv7l-cpython-311/Bio/Blast 2023-09-08T11:03:15,802 copying Bio/Blast/ParseBlastTable.py -> build/lib.linux-armv7l-cpython-311/Bio/Blast 2023-09-08T11:03:15,804 creating build/lib.linux-armv7l-cpython-311/Bio/CAPS 2023-09-08T11:03:15,805 copying Bio/CAPS/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/CAPS 2023-09-08T11:03:15,807 creating build/lib.linux-armv7l-cpython-311/Bio/Compass 2023-09-08T11:03:15,808 copying Bio/Compass/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Compass 2023-09-08T11:03:15,811 creating build/lib.linux-armv7l-cpython-311/Bio/Crystal 2023-09-08T11:03:15,812 copying Bio/Crystal/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Crystal 2023-09-08T11:03:15,814 creating build/lib.linux-armv7l-cpython-311/Bio/Data 2023-09-08T11:03:15,815 copying Bio/Data/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Data 2023-09-08T11:03:15,817 copying Bio/Data/IUPACData.py -> build/lib.linux-armv7l-cpython-311/Bio/Data 2023-09-08T11:03:15,819 copying Bio/Data/CodonTable.py -> build/lib.linux-armv7l-cpython-311/Bio/Data 2023-09-08T11:03:15,823 creating build/lib.linux-armv7l-cpython-311/Bio/Emboss 2023-09-08T11:03:15,824 copying Bio/Emboss/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Emboss 2023-09-08T11:03:15,827 copying Bio/Emboss/Applications.py -> build/lib.linux-armv7l-cpython-311/Bio/Emboss 2023-09-08T11:03:15,832 copying Bio/Emboss/PrimerSearch.py -> build/lib.linux-armv7l-cpython-311/Bio/Emboss 2023-09-08T11:03:15,837 copying Bio/Emboss/Primer3.py -> build/lib.linux-armv7l-cpython-311/Bio/Emboss 2023-09-08T11:03:15,841 creating build/lib.linux-armv7l-cpython-311/Bio/Entrez 2023-09-08T11:03:15,842 copying Bio/Entrez/Parser.py -> build/lib.linux-armv7l-cpython-311/Bio/Entrez 2023-09-08T11:03:15,844 copying Bio/Entrez/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Entrez 2023-09-08T11:03:15,847 creating build/lib.linux-armv7l-cpython-311/Bio/ExPASy 2023-09-08T11:03:15,848 copying Bio/ExPASy/Prodoc.py -> build/lib.linux-armv7l-cpython-311/Bio/ExPASy 2023-09-08T11:03:15,850 copying Bio/ExPASy/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/ExPASy 2023-09-08T11:03:15,852 copying Bio/ExPASy/ScanProsite.py -> build/lib.linux-armv7l-cpython-311/Bio/ExPASy 2023-09-08T11:03:15,853 copying Bio/ExPASy/Enzyme.py -> build/lib.linux-armv7l-cpython-311/Bio/ExPASy 2023-09-08T11:03:15,855 copying Bio/ExPASy/Prosite.py -> build/lib.linux-armv7l-cpython-311/Bio/ExPASy 2023-09-08T11:03:15,858 creating build/lib.linux-armv7l-cpython-311/Bio/FSSP 2023-09-08T11:03:15,858 copying Bio/FSSP/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/FSSP 2023-09-08T11:03:15,861 copying Bio/FSSP/fssp_rec.py -> build/lib.linux-armv7l-cpython-311/Bio/FSSP 2023-09-08T11:03:15,862 copying Bio/FSSP/FSSPTools.py -> build/lib.linux-armv7l-cpython-311/Bio/FSSP 2023-09-08T11:03:15,864 creating build/lib.linux-armv7l-cpython-311/Bio/GA 2023-09-08T11:03:15,865 copying Bio/GA/Organism.py -> build/lib.linux-armv7l-cpython-311/Bio/GA 2023-09-08T11:03:15,867 copying Bio/GA/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/GA 2023-09-08T11:03:15,869 copying Bio/GA/Evolver.py -> build/lib.linux-armv7l-cpython-311/Bio/GA 2023-09-08T11:03:15,871 creating build/lib.linux-armv7l-cpython-311/Bio/GA/Crossover 2023-09-08T11:03:15,872 copying Bio/GA/Crossover/TwoPoint.py -> build/lib.linux-armv7l-cpython-311/Bio/GA/Crossover 2023-09-08T11:03:15,874 copying Bio/GA/Crossover/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/GA/Crossover 2023-09-08T11:03:15,875 copying Bio/GA/Crossover/GeneralPoint.py -> build/lib.linux-armv7l-cpython-311/Bio/GA/Crossover 2023-09-08T11:03:15,877 copying Bio/GA/Crossover/Point.py -> build/lib.linux-armv7l-cpython-311/Bio/GA/Crossover 2023-09-08T11:03:15,879 copying Bio/GA/Crossover/Uniform.py -> build/lib.linux-armv7l-cpython-311/Bio/GA/Crossover 2023-09-08T11:03:15,881 copying Bio/GA/Crossover/General.py -> build/lib.linux-armv7l-cpython-311/Bio/GA/Crossover 2023-09-08T11:03:15,883 creating build/lib.linux-armv7l-cpython-311/Bio/GA/Mutation 2023-09-08T11:03:15,884 copying Bio/GA/Mutation/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/GA/Mutation 2023-09-08T11:03:15,886 copying Bio/GA/Mutation/Simple.py -> build/lib.linux-armv7l-cpython-311/Bio/GA/Mutation 2023-09-08T11:03:15,887 copying Bio/GA/Mutation/General.py -> build/lib.linux-armv7l-cpython-311/Bio/GA/Mutation 2023-09-08T11:03:15,889 creating build/lib.linux-armv7l-cpython-311/Bio/GA/Repair 2023-09-08T11:03:15,890 copying Bio/GA/Repair/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/GA/Repair 2023-09-08T11:03:15,892 copying Bio/GA/Repair/Stabilizing.py -> build/lib.linux-armv7l-cpython-311/Bio/GA/Repair 2023-09-08T11:03:15,894 creating build/lib.linux-armv7l-cpython-311/Bio/GA/Selection 2023-09-08T11:03:15,895 copying Bio/GA/Selection/Diversity.py -> build/lib.linux-armv7l-cpython-311/Bio/GA/Selection 2023-09-08T11:03:15,897 copying Bio/GA/Selection/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/GA/Selection 2023-09-08T11:03:15,899 copying Bio/GA/Selection/Abstract.py -> build/lib.linux-armv7l-cpython-311/Bio/GA/Selection 2023-09-08T11:03:15,900 copying Bio/GA/Selection/Tournament.py -> build/lib.linux-armv7l-cpython-311/Bio/GA/Selection 2023-09-08T11:03:15,902 copying Bio/GA/Selection/RouletteWheel.py -> build/lib.linux-armv7l-cpython-311/Bio/GA/Selection 2023-09-08T11:03:15,904 creating build/lib.linux-armv7l-cpython-311/Bio/GenBank 2023-09-08T11:03:15,905 copying Bio/GenBank/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/GenBank 2023-09-08T11:03:15,908 copying Bio/GenBank/Record.py -> build/lib.linux-armv7l-cpython-311/Bio/GenBank 2023-09-08T11:03:15,910 copying Bio/GenBank/utils.py -> build/lib.linux-armv7l-cpython-311/Bio/GenBank 2023-09-08T11:03:15,912 copying Bio/GenBank/Scanner.py -> build/lib.linux-armv7l-cpython-311/Bio/GenBank 2023-09-08T11:03:15,916 creating build/lib.linux-armv7l-cpython-311/Bio/Geo 2023-09-08T11:03:15,917 copying Bio/Geo/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Geo 2023-09-08T11:03:15,919 copying Bio/Geo/Record.py -> build/lib.linux-armv7l-cpython-311/Bio/Geo 2023-09-08T11:03:15,921 creating build/lib.linux-armv7l-cpython-311/Bio/Graphics 2023-09-08T11:03:15,922 copying Bio/Graphics/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Graphics 2023-09-08T11:03:15,925 copying Bio/Graphics/Distribution.py -> build/lib.linux-armv7l-cpython-311/Bio/Graphics 2023-09-08T11:03:15,927 copying Bio/Graphics/ColorSpiral.py -> build/lib.linux-armv7l-cpython-311/Bio/Graphics 2023-09-08T11:03:15,929 copying Bio/Graphics/Comparative.py -> build/lib.linux-armv7l-cpython-311/Bio/Graphics 2023-09-08T11:03:15,931 copying Bio/Graphics/BasicChromosome.py -> build/lib.linux-armv7l-cpython-311/Bio/Graphics 2023-09-08T11:03:15,933 copying Bio/Graphics/DisplayRepresentation.py -> build/lib.linux-armv7l-cpython-311/Bio/Graphics 2023-09-08T11:03:15,936 creating build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:15,937 copying Bio/Graphics/GenomeDiagram/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:15,939 copying Bio/Graphics/GenomeDiagram/_Feature.py -> build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:15,941 copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:15,943 copying Bio/Graphics/GenomeDiagram/_Graph.py -> build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:15,945 copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:15,948 copying Bio/Graphics/GenomeDiagram/_Track.py -> build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:15,950 copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:15,952 copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:15,954 copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:15,956 copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:15,959 copying Bio/Graphics/GenomeDiagram/_Colors.py -> build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:15,961 copying Bio/Graphics/GenomeDiagram/_Diagram.py -> build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:15,964 creating build/lib.linux-armv7l-cpython-311/Bio/HMM 2023-09-08T11:03:15,965 copying Bio/HMM/MarkovModel.py -> build/lib.linux-armv7l-cpython-311/Bio/HMM 2023-09-08T11:03:15,968 copying Bio/HMM/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/HMM 2023-09-08T11:03:15,969 copying Bio/HMM/DynamicProgramming.py -> build/lib.linux-armv7l-cpython-311/Bio/HMM 2023-09-08T11:03:15,971 copying Bio/HMM/Utilities.py -> build/lib.linux-armv7l-cpython-311/Bio/HMM 2023-09-08T11:03:15,973 copying Bio/HMM/Trainer.py -> build/lib.linux-armv7l-cpython-311/Bio/HMM 2023-09-08T11:03:15,975 creating build/lib.linux-armv7l-cpython-311/Bio/KEGG 2023-09-08T11:03:15,976 copying Bio/KEGG/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/KEGG 2023-09-08T11:03:15,978 creating build/lib.linux-armv7l-cpython-311/Bio/KEGG/Compound 2023-09-08T11:03:15,979 copying Bio/KEGG/Compound/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/KEGG/Compound 2023-09-08T11:03:15,981 creating build/lib.linux-armv7l-cpython-311/Bio/KEGG/Enzyme 2023-09-08T11:03:15,982 copying Bio/KEGG/Enzyme/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/KEGG/Enzyme 2023-09-08T11:03:15,985 creating build/lib.linux-armv7l-cpython-311/Bio/KEGG/Map 2023-09-08T11:03:15,986 copying Bio/KEGG/Map/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/KEGG/Map 2023-09-08T11:03:15,988 creating build/lib.linux-armv7l-cpython-311/Bio/Medline 2023-09-08T11:03:15,988 copying Bio/Medline/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Medline 2023-09-08T11:03:15,991 creating build/lib.linux-armv7l-cpython-311/Bio/Motif 2023-09-08T11:03:15,992 copying Bio/Motif/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Motif 2023-09-08T11:03:15,994 copying Bio/Motif/_Motif.py -> build/lib.linux-armv7l-cpython-311/Bio/Motif 2023-09-08T11:03:15,996 copying Bio/Motif/Thresholds.py -> build/lib.linux-armv7l-cpython-311/Bio/Motif 2023-09-08T11:03:15,998 creating build/lib.linux-armv7l-cpython-311/Bio/Motif/Parsers 2023-09-08T11:03:15,999 copying Bio/Motif/Parsers/MEME.py -> build/lib.linux-armv7l-cpython-311/Bio/Motif/Parsers 2023-09-08T11:03:16,001 copying Bio/Motif/Parsers/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Motif/Parsers 2023-09-08T11:03:16,002 copying Bio/Motif/Parsers/MAST.py -> build/lib.linux-armv7l-cpython-311/Bio/Motif/Parsers 2023-09-08T11:03:16,004 copying Bio/Motif/Parsers/AlignAce.py -> build/lib.linux-armv7l-cpython-311/Bio/Motif/Parsers 2023-09-08T11:03:16,007 creating build/lib.linux-armv7l-cpython-311/Bio/Motif/Applications 2023-09-08T11:03:16,007 copying Bio/Motif/Applications/_AlignAce.py -> build/lib.linux-armv7l-cpython-311/Bio/Motif/Applications 2023-09-08T11:03:16,010 copying Bio/Motif/Applications/_XXmotif.py -> build/lib.linux-armv7l-cpython-311/Bio/Motif/Applications 2023-09-08T11:03:16,012 copying Bio/Motif/Applications/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Motif/Applications 2023-09-08T11:03:16,015 creating build/lib.linux-armv7l-cpython-311/Bio/motifs 2023-09-08T11:03:16,016 copying Bio/motifs/alignace.py -> build/lib.linux-armv7l-cpython-311/Bio/motifs 2023-09-08T11:03:16,017 copying Bio/motifs/mast.py -> build/lib.linux-armv7l-cpython-311/Bio/motifs 2023-09-08T11:03:16,020 copying Bio/motifs/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/motifs 2023-09-08T11:03:16,022 copying Bio/motifs/transfac.py -> build/lib.linux-armv7l-cpython-311/Bio/motifs 2023-09-08T11:03:16,024 copying Bio/motifs/meme.py -> build/lib.linux-armv7l-cpython-311/Bio/motifs 2023-09-08T11:03:16,026 copying Bio/motifs/thresholds.py -> build/lib.linux-armv7l-cpython-311/Bio/motifs 2023-09-08T11:03:16,028 copying Bio/motifs/matrix.py -> build/lib.linux-armv7l-cpython-311/Bio/motifs 2023-09-08T11:03:16,030 copying Bio/motifs/jaspar.py -> build/lib.linux-armv7l-cpython-311/Bio/motifs 2023-09-08T11:03:16,032 creating build/lib.linux-armv7l-cpython-311/Bio/motifs/applications 2023-09-08T11:03:16,033 copying Bio/motifs/applications/_alignace.py -> build/lib.linux-armv7l-cpython-311/Bio/motifs/applications 2023-09-08T11:03:16,043 copying Bio/motifs/applications/_xxmotif.py -> build/lib.linux-armv7l-cpython-311/Bio/motifs/applications 2023-09-08T11:03:16,044 copying Bio/motifs/applications/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/motifs/applications 2023-09-08T11:03:16,047 creating build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork 2023-09-08T11:03:16,047 copying Bio/NeuralNetwork/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork 2023-09-08T11:03:16,049 copying Bio/NeuralNetwork/StopTraining.py -> build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork 2023-09-08T11:03:16,050 copying Bio/NeuralNetwork/Training.py -> build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork 2023-09-08T11:03:16,052 creating build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/BackPropagation 2023-09-08T11:03:16,053 copying Bio/NeuralNetwork/BackPropagation/Layer.py -> build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/BackPropagation 2023-09-08T11:03:16,055 copying Bio/NeuralNetwork/BackPropagation/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/BackPropagation 2023-09-08T11:03:16,057 copying Bio/NeuralNetwork/BackPropagation/Network.py -> build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/BackPropagation 2023-09-08T11:03:16,059 creating build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/Gene 2023-09-08T11:03:16,060 copying Bio/NeuralNetwork/Gene/Signature.py -> build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/Gene 2023-09-08T11:03:16,062 copying Bio/NeuralNetwork/Gene/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/Gene 2023-09-08T11:03:16,063 copying Bio/NeuralNetwork/Gene/Schema.py -> build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/Gene 2023-09-08T11:03:16,065 copying Bio/NeuralNetwork/Gene/Motif.py -> build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/Gene 2023-09-08T11:03:16,067 copying Bio/NeuralNetwork/Gene/Pattern.py -> build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/Gene 2023-09-08T11:03:16,070 creating build/lib.linux-armv7l-cpython-311/Bio/Nexus 2023-09-08T11:03:16,071 copying Bio/Nexus/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Nexus 2023-09-08T11:03:16,072 copying Bio/Nexus/Nexus.py -> build/lib.linux-armv7l-cpython-311/Bio/Nexus 2023-09-08T11:03:16,075 copying Bio/Nexus/Trees.py -> build/lib.linux-armv7l-cpython-311/Bio/Nexus 2023-09-08T11:03:16,078 copying Bio/Nexus/Nodes.py -> build/lib.linux-armv7l-cpython-311/Bio/Nexus 2023-09-08T11:03:16,080 creating build/lib.linux-armv7l-cpython-311/Bio/NMR 2023-09-08T11:03:16,081 copying Bio/NMR/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/NMR 2023-09-08T11:03:16,083 copying Bio/NMR/NOEtools.py -> build/lib.linux-armv7l-cpython-311/Bio/NMR 2023-09-08T11:03:16,084 copying Bio/NMR/xpktools.py -> build/lib.linux-armv7l-cpython-311/Bio/NMR 2023-09-08T11:03:16,086 creating build/lib.linux-armv7l-cpython-311/Bio/Pathway 2023-09-08T11:03:16,087 copying Bio/Pathway/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Pathway 2023-09-08T11:03:16,090 creating build/lib.linux-armv7l-cpython-311/Bio/Pathway/Rep 2023-09-08T11:03:16,091 copying Bio/Pathway/Rep/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Pathway/Rep 2023-09-08T11:03:16,092 copying Bio/Pathway/Rep/HashSet.py -> build/lib.linux-armv7l-cpython-311/Bio/Pathway/Rep 2023-09-08T11:03:16,094 copying Bio/Pathway/Rep/Graph.py -> build/lib.linux-armv7l-cpython-311/Bio/Pathway/Rep 2023-09-08T11:03:16,096 copying Bio/Pathway/Rep/MultiGraph.py -> build/lib.linux-armv7l-cpython-311/Bio/Pathway/Rep 2023-09-08T11:03:16,099 creating build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,100 copying Bio/PDB/Model.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,102 copying Bio/PDB/FragmentMapper.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,103 copying Bio/PDB/PDBParser.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,106 copying Bio/PDB/parse_pdb_header.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,107 copying Bio/PDB/Polypeptide.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,110 copying Bio/PDB/DSSP.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,112 copying Bio/PDB/NACCESS.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,114 copying Bio/PDB/NeighborSearch.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,116 copying Bio/PDB/Dice.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,117 copying Bio/PDB/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,119 copying Bio/PDB/Entity.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,121 copying Bio/PDB/ResidueDepth.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,123 copying Bio/PDB/Selection.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,124 copying Bio/PDB/Vector.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,126 copying Bio/PDB/PDBIO.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,128 copying Bio/PDB/PDBExceptions.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,129 copying Bio/PDB/StructureAlignment.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,131 copying Bio/PDB/Residue.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,132 copying Bio/PDB/Chain.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,134 copying Bio/PDB/PDBList.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,136 copying Bio/PDB/Structure.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,137 copying Bio/PDB/AbstractPropertyMap.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,139 copying Bio/PDB/MMCIFParser.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,140 copying Bio/PDB/MMCIF2Dict.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,142 copying Bio/PDB/Atom.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,144 copying Bio/PDB/Superimposer.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,146 copying Bio/PDB/HSExposure.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,148 copying Bio/PDB/PSEA.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,149 copying Bio/PDB/StructureBuilder.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB 2023-09-08T11:03:16,152 creating build/lib.linux-armv7l-cpython-311/Bio/PDB/mmCIF 2023-09-08T11:03:16,153 copying Bio/PDB/mmCIF/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/PDB/mmCIF 2023-09-08T11:03:16,155 creating build/lib.linux-armv7l-cpython-311/Bio/PopGen 2023-09-08T11:03:16,155 copying Bio/PopGen/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/PopGen 2023-09-08T11:03:16,157 creating build/lib.linux-armv7l-cpython-311/Bio/PopGen/Async 2023-09-08T11:03:16,158 copying Bio/PopGen/Async/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/Async 2023-09-08T11:03:16,160 copying Bio/PopGen/Async/Local.py -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/Async 2023-09-08T11:03:16,162 creating build/lib.linux-armv7l-cpython-311/Bio/PopGen/FDist 2023-09-08T11:03:16,163 copying Bio/PopGen/FDist/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/FDist 2023-09-08T11:03:16,165 copying Bio/PopGen/FDist/Utils.py -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/FDist 2023-09-08T11:03:16,167 copying Bio/PopGen/FDist/Controller.py -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/FDist 2023-09-08T11:03:16,169 copying Bio/PopGen/FDist/Async.py -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/FDist 2023-09-08T11:03:16,172 creating build/lib.linux-armv7l-cpython-311/Bio/PopGen/GenePop 2023-09-08T11:03:16,172 copying Bio/PopGen/GenePop/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/GenePop 2023-09-08T11:03:16,175 copying Bio/PopGen/GenePop/FileParser.py -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/GenePop 2023-09-08T11:03:16,177 copying Bio/PopGen/GenePop/Utils.py -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/GenePop 2023-09-08T11:03:16,178 copying Bio/PopGen/GenePop/EasyController.py -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/GenePop 2023-09-08T11:03:16,180 copying Bio/PopGen/GenePop/Controller.py -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/GenePop 2023-09-08T11:03:16,182 copying Bio/PopGen/GenePop/LargeFileParser.py -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/GenePop 2023-09-08T11:03:16,184 creating build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal 2023-09-08T11:03:16,185 copying Bio/PopGen/SimCoal/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal 2023-09-08T11:03:16,186 copying Bio/PopGen/SimCoal/Template.py -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal 2023-09-08T11:03:16,188 copying Bio/PopGen/SimCoal/Cache.py -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal 2023-09-08T11:03:16,190 copying Bio/PopGen/SimCoal/Controller.py -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal 2023-09-08T11:03:16,191 copying Bio/PopGen/SimCoal/Async.py -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal 2023-09-08T11:03:16,193 creating build/lib.linux-armv7l-cpython-311/Bio/Restriction 2023-09-08T11:03:16,194 copying Bio/Restriction/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Restriction 2023-09-08T11:03:16,196 copying Bio/Restriction/RanaConfig.py -> build/lib.linux-armv7l-cpython-311/Bio/Restriction 2023-09-08T11:03:16,198 copying Bio/Restriction/Restriction_Dictionary.py -> build/lib.linux-armv7l-cpython-311/Bio/Restriction 2023-09-08T11:03:16,208 copying Bio/Restriction/Restriction.py -> build/lib.linux-armv7l-cpython-311/Bio/Restriction 2023-09-08T11:03:16,211 copying Bio/Restriction/PrintFormat.py -> build/lib.linux-armv7l-cpython-311/Bio/Restriction 2023-09-08T11:03:16,213 creating build/lib.linux-armv7l-cpython-311/Bio/Restriction/_Update 2023-09-08T11:03:16,214 copying Bio/Restriction/_Update/RestrictionCompiler.py -> build/lib.linux-armv7l-cpython-311/Bio/Restriction/_Update 2023-09-08T11:03:16,217 copying Bio/Restriction/_Update/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Restriction/_Update 2023-09-08T11:03:16,218 copying Bio/Restriction/_Update/Update.py -> build/lib.linux-armv7l-cpython-311/Bio/Restriction/_Update 2023-09-08T11:03:16,220 creating build/lib.linux-armv7l-cpython-311/Bio/SCOP 2023-09-08T11:03:16,221 copying Bio/SCOP/Raf.py -> build/lib.linux-armv7l-cpython-311/Bio/SCOP 2023-09-08T11:03:16,223 copying Bio/SCOP/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/SCOP 2023-09-08T11:03:16,225 copying Bio/SCOP/Des.py -> build/lib.linux-armv7l-cpython-311/Bio/SCOP 2023-09-08T11:03:16,227 copying Bio/SCOP/Hie.py -> build/lib.linux-armv7l-cpython-311/Bio/SCOP 2023-09-08T11:03:16,228 copying Bio/SCOP/Cla.py -> build/lib.linux-armv7l-cpython-311/Bio/SCOP 2023-09-08T11:03:16,230 copying Bio/SCOP/three_to_one_dict.py -> build/lib.linux-armv7l-cpython-311/Bio/SCOP 2023-09-08T11:03:16,232 copying Bio/SCOP/Residues.py -> build/lib.linux-armv7l-cpython-311/Bio/SCOP 2023-09-08T11:03:16,234 copying Bio/SCOP/Dom.py -> build/lib.linux-armv7l-cpython-311/Bio/SCOP 2023-09-08T11:03:16,236 creating build/lib.linux-armv7l-cpython-311/Bio/SearchIO 2023-09-08T11:03:16,236 copying Bio/SearchIO/_index.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO 2023-09-08T11:03:16,238 copying Bio/SearchIO/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO 2023-09-08T11:03:16,240 copying Bio/SearchIO/BlatIO.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO 2023-09-08T11:03:16,243 copying Bio/SearchIO/_utils.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO 2023-09-08T11:03:16,245 copying Bio/SearchIO/FastaIO.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO 2023-09-08T11:03:16,248 creating build/lib.linux-armv7l-cpython-311/Bio/SearchIO/_model 2023-09-08T11:03:16,249 copying Bio/SearchIO/_model/query.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/_model 2023-09-08T11:03:16,251 copying Bio/SearchIO/_model/hsp.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/_model 2023-09-08T11:03:16,254 copying Bio/SearchIO/_model/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/_model 2023-09-08T11:03:16,255 copying Bio/SearchIO/_model/hit.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/_model 2023-09-08T11:03:16,257 copying Bio/SearchIO/_model/_base.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/_model 2023-09-08T11:03:16,259 creating build/lib.linux-armv7l-cpython-311/Bio/SearchIO/BlastIO 2023-09-08T11:03:16,260 copying Bio/SearchIO/BlastIO/blast_xml.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/BlastIO 2023-09-08T11:03:16,263 copying Bio/SearchIO/BlastIO/blast_tab.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/BlastIO 2023-09-08T11:03:16,265 copying Bio/SearchIO/BlastIO/blast_text.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/BlastIO 2023-09-08T11:03:16,267 copying Bio/SearchIO/BlastIO/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/BlastIO 2023-09-08T11:03:16,269 creating build/lib.linux-armv7l-cpython-311/Bio/SearchIO/HmmerIO 2023-09-08T11:03:16,270 copying Bio/SearchIO/HmmerIO/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/HmmerIO 2023-09-08T11:03:16,273 copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/HmmerIO 2023-09-08T11:03:16,275 copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/HmmerIO 2023-09-08T11:03:16,277 copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/HmmerIO 2023-09-08T11:03:16,279 copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/HmmerIO 2023-09-08T11:03:16,281 copying Bio/SearchIO/HmmerIO/_base.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/HmmerIO 2023-09-08T11:03:16,283 creating build/lib.linux-armv7l-cpython-311/Bio/SearchIO/ExonerateIO 2023-09-08T11:03:16,284 copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/ExonerateIO 2023-09-08T11:03:16,286 copying Bio/SearchIO/ExonerateIO/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/ExonerateIO 2023-09-08T11:03:16,288 copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/ExonerateIO 2023-09-08T11:03:16,290 copying Bio/SearchIO/ExonerateIO/_base.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/ExonerateIO 2023-09-08T11:03:16,292 copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/lib.linux-armv7l-cpython-311/Bio/SearchIO/ExonerateIO 2023-09-08T11:03:16,295 creating build/lib.linux-armv7l-cpython-311/Bio/SeqIO 2023-09-08T11:03:16,296 copying Bio/SeqIO/TabIO.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqIO 2023-09-08T11:03:16,298 copying Bio/SeqIO/_index.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqIO 2023-09-08T11:03:16,300 copying Bio/SeqIO/AceIO.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqIO 2023-09-08T11:03:16,302 copying Bio/SeqIO/PirIO.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqIO 2023-09-08T11:03:16,304 copying Bio/SeqIO/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqIO 2023-09-08T11:03:16,307 copying Bio/SeqIO/QualityIO.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqIO 2023-09-08T11:03:16,310 copying Bio/SeqIO/_convert.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqIO 2023-09-08T11:03:16,312 copying Bio/SeqIO/SwissIO.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqIO 2023-09-08T11:03:16,314 copying Bio/SeqIO/UniprotIO.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqIO 2023-09-08T11:03:16,316 copying Bio/SeqIO/SffIO.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqIO 2023-09-08T11:03:16,319 copying Bio/SeqIO/SeqXmlIO.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqIO 2023-09-08T11:03:16,321 copying Bio/SeqIO/IgIO.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqIO 2023-09-08T11:03:16,323 copying Bio/SeqIO/AbiIO.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqIO 2023-09-08T11:03:16,325 copying Bio/SeqIO/FastaIO.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqIO 2023-09-08T11:03:16,327 copying Bio/SeqIO/PhdIO.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqIO 2023-09-08T11:03:16,329 copying Bio/SeqIO/PdbIO.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqIO 2023-09-08T11:03:16,331 copying Bio/SeqIO/InsdcIO.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqIO 2023-09-08T11:03:16,334 copying Bio/SeqIO/Interfaces.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqIO 2023-09-08T11:03:16,336 creating build/lib.linux-armv7l-cpython-311/Bio/SeqUtils 2023-09-08T11:03:16,337 copying Bio/SeqUtils/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqUtils 2023-09-08T11:03:16,339 copying Bio/SeqUtils/MeltingTemp.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqUtils 2023-09-08T11:03:16,341 copying Bio/SeqUtils/ProtParam.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqUtils 2023-09-08T11:03:16,343 copying Bio/SeqUtils/lcc.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqUtils 2023-09-08T11:03:16,345 copying Bio/SeqUtils/CodonUsageIndices.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqUtils 2023-09-08T11:03:16,346 copying Bio/SeqUtils/CodonUsage.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqUtils 2023-09-08T11:03:16,348 copying Bio/SeqUtils/CheckSum.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqUtils 2023-09-08T11:03:16,349 copying Bio/SeqUtils/IsoelectricPoint.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqUtils 2023-09-08T11:03:16,351 copying Bio/SeqUtils/ProtParamData.py -> build/lib.linux-armv7l-cpython-311/Bio/SeqUtils 2023-09-08T11:03:16,353 creating build/lib.linux-armv7l-cpython-311/Bio/Sequencing 2023-09-08T11:03:16,354 copying Bio/Sequencing/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Sequencing 2023-09-08T11:03:16,356 copying Bio/Sequencing/Ace.py -> build/lib.linux-armv7l-cpython-311/Bio/Sequencing 2023-09-08T11:03:16,358 copying Bio/Sequencing/Phd.py -> build/lib.linux-armv7l-cpython-311/Bio/Sequencing 2023-09-08T11:03:16,360 creating build/lib.linux-armv7l-cpython-311/Bio/Sequencing/Applications 2023-09-08T11:03:16,361 copying Bio/Sequencing/Applications/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Sequencing/Applications 2023-09-08T11:03:16,363 copying Bio/Sequencing/Applications/_Novoalign.py -> build/lib.linux-armv7l-cpython-311/Bio/Sequencing/Applications 2023-09-08T11:03:16,365 creating build/lib.linux-armv7l-cpython-311/Bio/Statistics 2023-09-08T11:03:16,366 copying Bio/Statistics/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Statistics 2023-09-08T11:03:16,368 copying Bio/Statistics/lowess.py -> build/lib.linux-armv7l-cpython-311/Bio/Statistics 2023-09-08T11:03:16,370 creating build/lib.linux-armv7l-cpython-311/Bio/SubsMat 2023-09-08T11:03:16,371 copying Bio/SubsMat/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/SubsMat 2023-09-08T11:03:16,373 copying Bio/SubsMat/MatrixInfo.py -> build/lib.linux-armv7l-cpython-311/Bio/SubsMat 2023-09-08T11:03:16,377 copying Bio/SubsMat/FreqTable.py -> build/lib.linux-armv7l-cpython-311/Bio/SubsMat 2023-09-08T11:03:16,379 creating build/lib.linux-armv7l-cpython-311/Bio/SVDSuperimposer 2023-09-08T11:03:16,380 copying Bio/SVDSuperimposer/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/SVDSuperimposer 2023-09-08T11:03:16,382 copying Bio/SVDSuperimposer/SVDSuperimposer.py -> build/lib.linux-armv7l-cpython-311/Bio/SVDSuperimposer 2023-09-08T11:03:16,384 creating build/lib.linux-armv7l-cpython-311/Bio/SwissProt 2023-09-08T11:03:16,385 copying Bio/SwissProt/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/SwissProt 2023-09-08T11:03:16,388 copying Bio/SwissProt/KeyWList.py -> build/lib.linux-armv7l-cpython-311/Bio/SwissProt 2023-09-08T11:03:16,390 creating build/lib.linux-armv7l-cpython-311/Bio/TogoWS 2023-09-08T11:03:16,391 copying Bio/TogoWS/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/TogoWS 2023-09-08T11:03:16,394 creating build/lib.linux-armv7l-cpython-311/Bio/Phylo 2023-09-08T11:03:16,394 copying Bio/Phylo/_io.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo 2023-09-08T11:03:16,396 copying Bio/Phylo/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo 2023-09-08T11:03:16,398 copying Bio/Phylo/BaseTree.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo 2023-09-08T11:03:16,400 copying Bio/Phylo/NexusIO.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo 2023-09-08T11:03:16,402 copying Bio/Phylo/_utils.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo 2023-09-08T11:03:16,404 copying Bio/Phylo/Newick.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo 2023-09-08T11:03:16,406 copying Bio/Phylo/PhyloXML.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo 2023-09-08T11:03:16,408 copying Bio/Phylo/PhyloXMLIO.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo 2023-09-08T11:03:16,411 copying Bio/Phylo/NewickIO.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo 2023-09-08T11:03:16,414 creating build/lib.linux-armv7l-cpython-311/Bio/Phylo/Applications 2023-09-08T11:03:16,415 copying Bio/Phylo/Applications/_Raxml.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo/Applications 2023-09-08T11:03:16,417 copying Bio/Phylo/Applications/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo/Applications 2023-09-08T11:03:16,418 copying Bio/Phylo/Applications/_Phyml.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo/Applications 2023-09-08T11:03:16,421 creating build/lib.linux-armv7l-cpython-311/Bio/Phylo/PAML 2023-09-08T11:03:16,422 copying Bio/Phylo/PAML/_parse_yn00.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo/PAML 2023-09-08T11:03:16,424 copying Bio/Phylo/PAML/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo/PAML 2023-09-08T11:03:16,425 copying Bio/Phylo/PAML/codeml.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo/PAML 2023-09-08T11:03:16,427 copying Bio/Phylo/PAML/baseml.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo/PAML 2023-09-08T11:03:16,429 copying Bio/Phylo/PAML/_paml.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo/PAML 2023-09-08T11:03:16,431 copying Bio/Phylo/PAML/yn00.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo/PAML 2023-09-08T11:03:16,433 copying Bio/Phylo/PAML/_parse_codeml.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo/PAML 2023-09-08T11:03:16,436 copying Bio/Phylo/PAML/_parse_baseml.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo/PAML 2023-09-08T11:03:16,438 copying Bio/Phylo/PAML/chi2.py -> build/lib.linux-armv7l-cpython-311/Bio/Phylo/PAML 2023-09-08T11:03:16,440 creating build/lib.linux-armv7l-cpython-311/Bio/UniGene 2023-09-08T11:03:16,441 copying Bio/UniGene/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/UniGene 2023-09-08T11:03:16,443 copying Bio/UniGene/UniGene.py -> build/lib.linux-armv7l-cpython-311/Bio/UniGene 2023-09-08T11:03:16,445 creating build/lib.linux-armv7l-cpython-311/Bio/Wise 2023-09-08T11:03:16,446 copying Bio/Wise/psw.py -> build/lib.linux-armv7l-cpython-311/Bio/Wise 2023-09-08T11:03:16,448 copying Bio/Wise/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Wise 2023-09-08T11:03:16,450 copying Bio/Wise/dnal.py -> build/lib.linux-armv7l-cpython-311/Bio/Wise 2023-09-08T11:03:16,452 creating build/lib.linux-armv7l-cpython-311/Bio/_py3k 2023-09-08T11:03:16,453 copying Bio/_py3k/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/_py3k 2023-09-08T11:03:16,455 copying Bio/_py3k/_ordereddict.py -> build/lib.linux-armv7l-cpython-311/Bio/_py3k 2023-09-08T11:03:16,458 creating build/lib.linux-armv7l-cpython-311/BioSQL 2023-09-08T11:03:16,459 copying BioSQL/BioSeq.py -> build/lib.linux-armv7l-cpython-311/BioSQL 2023-09-08T11:03:16,461 copying BioSQL/Loader.py -> build/lib.linux-armv7l-cpython-311/BioSQL 2023-09-08T11:03:16,464 copying BioSQL/__init__.py -> build/lib.linux-armv7l-cpython-311/BioSQL 2023-09-08T11:03:16,465 copying BioSQL/DBUtils.py -> build/lib.linux-armv7l-cpython-311/BioSQL 2023-09-08T11:03:16,467 copying BioSQL/BioSeqDatabase.py -> build/lib.linux-armv7l-cpython-311/BioSQL 2023-09-08T11:03:16,470 creating build/lib.linux-armv7l-cpython-311/Bio/Affy 2023-09-08T11:03:16,471 copying Bio/Affy/CelFile.py -> build/lib.linux-armv7l-cpython-311/Bio/Affy 2023-09-08T11:03:16,473 copying Bio/Affy/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Affy 2023-09-08T11:03:16,475 creating build/lib.linux-armv7l-cpython-311/Bio/Cluster 2023-09-08T11:03:16,476 copying Bio/Cluster/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/Cluster 2023-09-08T11:03:16,479 creating build/lib.linux-armv7l-cpython-311/Bio/KDTree 2023-09-08T11:03:16,479 copying Bio/KDTree/__init__.py -> build/lib.linux-armv7l-cpython-311/Bio/KDTree 2023-09-08T11:03:16,481 copying Bio/KDTree/KDTree.py -> build/lib.linux-armv7l-cpython-311/Bio/KDTree 2023-09-08T11:03:16,498 creating build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,499 copying Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,501 copying Bio/Entrez/DTDs/HomoloGene.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,503 copying Bio/Entrez/DTDs/eSpell.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,505 copying Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,507 copying Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,510 copying Bio/Entrez/DTDs/egquery.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,512 copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,514 copying Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,517 copying Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,519 copying Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,521 copying Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,523 copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,526 copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,529 copying Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,531 copying Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,534 copying Bio/Entrez/DTDs/eInfo_020511.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,536 copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,538 copying Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,541 copying Bio/Entrez/DTDs/pubmed_120101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,543 copying Bio/Entrez/DTDs/archivearticle.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,546 copying Bio/Entrez/DTDs/ePost_020511.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,548 copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,550 copying Bio/Entrez/DTDs/elink_020122.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,553 copying Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,555 copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,557 copying Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,560 copying Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,562 copying Bio/Entrez/DTDs/bookdoc_110101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,565 copying Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,569 copying Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,573 copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,575 copying Bio/Entrez/DTDs/pubmed_110101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,578 copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,580 copying Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,583 copying Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,586 copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,588 copying Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,591 copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,594 copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,597 copying Bio/Entrez/DTDs/eLink_090910.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,599 copying Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,602 copying Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,605 copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,607 copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,610 copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,612 copying Bio/Entrez/DTDs/eLink_020511.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,615 copying Bio/Entrez/DTDs/pubmed_080101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,618 copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,621 copying Bio/Entrez/DTDs/SP_General.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,623 copying Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,626 copying Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,628 copying Bio/Entrez/DTDs/eSummary_041029.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,631 copying Bio/Entrez/DTDs/eSearch_020511.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,633 copying Bio/Entrez/DTDs/eLink_101123.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,636 copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,639 copying Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,642 copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,645 copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,647 copying Bio/Entrez/DTDs/pubmed_100101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,650 copying Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,653 copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,656 copying Bio/Entrez/DTDs/pubmed_020114.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,659 copying Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,661 copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,664 copying Bio/Entrez/DTDs/pubmed_090101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,666 copying Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,668 copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,670 copying Bio/Entrez/DTDs/mathml2.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,674 copying Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,676 copying Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,678 copying Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,680 copying Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,682 copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,684 copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,687 copying Bio/Entrez/DTDs/pmc-1.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,689 copying Bio/Entrez/DTDs/htmltable.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,692 copying Bio/Entrez/DTDs/taxon.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,694 copying Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,696 copying Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,698 copying Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,700 copying Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,702 copying Bio/Entrez/DTDs/pubmed_130101.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,704 copying Bio/Entrez/DTDs/pubmed_100301.dtd -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,706 copying Bio/Entrez/DTDs/isotech.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,708 copying Bio/Entrez/DTDs/isogrk1.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,710 copying Bio/Entrez/DTDs/chars.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,713 copying Bio/Entrez/DTDs/references.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,716 copying Bio/Entrez/DTDs/common.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,720 copying Bio/Entrez/DTDs/isoamso.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,723 copying Bio/Entrez/DTDs/isogrk2.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,725 copying Bio/Entrez/DTDs/math.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,727 copying Bio/Entrez/DTDs/XHTMLtablesetup.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,730 copying Bio/Entrez/DTDs/isoamsr.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,733 copying Bio/Entrez/DTDs/articlemeta.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,737 copying Bio/Entrez/DTDs/xmlspecchars.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,740 copying Bio/Entrez/DTDs/isolat1.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,742 copying Bio/Entrez/DTDs/isogrk3.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,744 copying Bio/Entrez/DTDs/isodia.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,746 copying Bio/Entrez/DTDs/format.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,749 copying Bio/Entrez/DTDs/archivecustom-modules.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,751 copying Bio/Entrez/DTDs/notat.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,754 copying Bio/Entrez/DTDs/para.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,756 copying Bio/Entrez/DTDs/isoamsn.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,759 copying Bio/Entrez/DTDs/isoamsa.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,761 copying Bio/Entrez/DTDs/isolat2.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,764 copying Bio/Entrez/DTDs/mmlextra.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,766 copying Bio/Entrez/DTDs/isomfrk.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,768 copying Bio/Entrez/DTDs/isomscr.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,771 copying Bio/Entrez/DTDs/default-classes.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,773 copying Bio/Entrez/DTDs/isopub.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,776 copying Bio/Entrez/DTDs/default-mixes.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,779 copying Bio/Entrez/DTDs/isoamsc.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,781 copying Bio/Entrez/DTDs/isoamsb.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,783 copying Bio/Entrez/DTDs/mmlalias.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,786 copying Bio/Entrez/DTDs/isobox.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,788 copying Bio/Entrez/DTDs/archivecustom-models.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,791 copying Bio/Entrez/DTDs/link.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,794 copying Bio/Entrez/DTDs/archivecustom-classes.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,797 copying Bio/Entrez/DTDs/section.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,799 copying Bio/Entrez/DTDs/backmatter.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,802 copying Bio/Entrez/DTDs/journalmeta.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,805 copying Bio/Entrez/DTDs/modules.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,808 copying Bio/Entrez/DTDs/isocyr1.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,810 copying Bio/Entrez/DTDs/isocyr2.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,812 copying Bio/Entrez/DTDs/isogrk4.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,815 copying Bio/Entrez/DTDs/display.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,819 copying Bio/Entrez/DTDs/isonum.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,821 copying Bio/Entrez/DTDs/isomopf.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,823 copying Bio/Entrez/DTDs/mathmlsetup.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,826 copying Bio/Entrez/DTDs/list.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,829 copying Bio/Entrez/DTDs/phrase.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,831 copying Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,834 copying Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs 2023-09-08T11:03:16,836 creating build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data 2023-09-08T11:03:16,837 copying Bio/PopGen/SimCoal/data/split_island.par -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data 2023-09-08T11:03:16,839 copying Bio/PopGen/SimCoal/data/simple.par -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data 2023-09-08T11:03:16,841 copying Bio/PopGen/SimCoal/data/island.par -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data 2023-09-08T11:03:16,843 copying Bio/PopGen/SimCoal/data/decline_lambda.par -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data 2023-09-08T11:03:16,845 copying Bio/PopGen/SimCoal/data/split_ssm_2d.par -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data 2023-09-08T11:03:16,847 copying Bio/PopGen/SimCoal/data/bottle.par -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data 2023-09-08T11:03:16,849 copying Bio/PopGen/SimCoal/data/split_ssm_1d.par -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data 2023-09-08T11:03:16,850 copying Bio/PopGen/SimCoal/data/ssm_1d.par -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data 2023-09-08T11:03:16,852 copying Bio/PopGen/SimCoal/data/decline_split.par -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data 2023-09-08T11:03:16,854 copying Bio/PopGen/SimCoal/data/ssm_2d.par -> build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data 2023-09-08T11:03:16,887 running build_ext 2023-09-08T11:03:16,894 building 'Bio.cpairwise2' extension 2023-09-08T11:03:16,895 creating build/temp.linux-armv7l-cpython-311 2023-09-08T11:03:16,896 creating build/temp.linux-armv7l-cpython-311/Bio 2023-09-08T11:03:16,896 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -IBio -I/usr/include/python3.11 -c Bio/cpairwise2module.c -o build/temp.linux-armv7l-cpython-311/Bio/cpairwise2module.o 2023-09-08T11:03:17,258 Bio/cpairwise2module.c: In function ‘_get_match_score’: 2023-09-08T11:03:17,258 Bio/cpairwise2module.c:181:5: warning: ‘PyEval_CallObjectWithKeywords’ is deprecated [-Wdeprecated-declarations] 2023-09-08T11:03:17,259 181 | if(!(py_result = PyEval_CallObject(py_match_fn, py_arglist))) 2023-09-08T11:03:17,260 | ^~ 2023-09-08T11:03:17,260 In file included from /usr/include/python3.11/Python.h:95, 2023-09-08T11:03:17,261 from Bio/cpairwise2module.c:12: 2023-09-08T11:03:17,262 /usr/include/python3.11/ceval.h:27:43: note: declared here 2023-09-08T11:03:17,262 27 | Py_DEPRECATED(3.9) PyAPI_FUNC(PyObject *) PyEval_CallObjectWithKeywords( 2023-09-08T11:03:17,263 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-08T11:03:18,117 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/Bio/cpairwise2module.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/Bio/cpairwise2.cpython-311-arm-linux-gnueabihf.so 2023-09-08T11:03:18,211 building 'Bio.Nexus.cnexus' extension 2023-09-08T11:03:18,212 creating build/temp.linux-armv7l-cpython-311/Bio/Nexus 2023-09-08T11:03:18,213 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c Bio/Nexus/cnexus.c -o build/temp.linux-armv7l-cpython-311/Bio/Nexus/cnexus.o 2023-09-08T11:03:18,681 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/Bio/Nexus/cnexus.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/Bio/Nexus/cnexus.cpython-311-arm-linux-gnueabihf.so 2023-09-08T11:03:18,774 building 'Bio.Cluster.cluster' extension 2023-09-08T11:03:18,775 creating build/temp.linux-armv7l-cpython-311/Bio/Cluster 2023-09-08T11:03:18,775 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c Bio/Cluster/cluster.c -o build/temp.linux-armv7l-cpython-311/Bio/Cluster/cluster.o 2023-09-08T11:03:26,082 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c Bio/Cluster/clustermodule.c -o build/temp.linux-armv7l-cpython-311/Bio/Cluster/clustermodule.o 2023-09-08T11:03:26,449 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, 2023-09-08T11:03:26,449 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-08T11:03:26,450 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-08T11:03:26,450 from Bio/Cluster/clustermodule.c:2: 2023-09-08T11:03:26,451 /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-08T11:03:26,451 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-08T11:03:26,452 | ^~~~~~~ 2023-09-08T11:03:26,474 Bio/Cluster/clustermodule.c: In function ‘distance_converter’: 2023-09-08T11:03:26,475 Bio/Cluster/clustermodule.c:35:7: warning: ‘PyUnicode_AS_DATA’ is deprecated [-Wdeprecated-declarations] 2023-09-08T11:03:26,476 35 | data = PyUnicode_AS_DATA(object); 2023-09-08T11:03:26,476 | ^~~~ 2023-09-08T11:03:26,477 In file included from /usr/include/python3.11/unicodeobject.h:1042, 2023-09-08T11:03:26,478 from /usr/include/python3.11/Python.h:51, 2023-09-08T11:03:26,479 from Bio/Cluster/clustermodule.c:1: 2023-09-08T11:03:26,480 /usr/include/python3.11/cpython/unicodeobject.h:702:27: note: declared here 2023-09-08T11:03:26,480 702 | static inline const char* PyUnicode_AS_DATA(PyObject *op) 2023-09-08T11:03:26,481 | ^~~~~~~~~~~~~~~~~ 2023-09-08T11:03:26,482 Bio/Cluster/clustermodule.c: In function ‘method_treecluster_converter’: 2023-09-08T11:03:26,483 Bio/Cluster/clustermodule.c:64:7: warning: ‘PyUnicode_AS_DATA’ is deprecated [-Wdeprecated-declarations] 2023-09-08T11:03:26,483 64 | data = PyUnicode_AS_DATA(object); 2023-09-08T11:03:26,484 | ^~~~ 2023-09-08T11:03:26,485 /usr/include/python3.11/cpython/unicodeobject.h:702:27: note: declared here 2023-09-08T11:03:26,485 702 | static inline const char* PyUnicode_AS_DATA(PyObject *op) 2023-09-08T11:03:26,486 | ^~~~~~~~~~~~~~~~~ 2023-09-08T11:03:26,487 Bio/Cluster/clustermodule.c: In function ‘method_kcluster_converter’: 2023-09-08T11:03:26,487 Bio/Cluster/clustermodule.c:93:7: warning: ‘PyUnicode_AS_DATA’ is deprecated [-Wdeprecated-declarations] 2023-09-08T11:03:26,488 93 | data = PyUnicode_AS_DATA(object); 2023-09-08T11:03:26,489 | ^~~~ 2023-09-08T11:03:26,490 /usr/include/python3.11/cpython/unicodeobject.h:702:27: note: declared here 2023-09-08T11:03:26,491 702 | static inline const char* PyUnicode_AS_DATA(PyObject *op) 2023-09-08T11:03:26,492 | ^~~~~~~~~~~~~~~~~ 2023-09-08T11:03:26,492 Bio/Cluster/clustermodule.c: In function ‘method_clusterdistance_converter’: 2023-09-08T11:03:26,493 Bio/Cluster/clustermodule.c:122:7: warning: ‘PyUnicode_AS_DATA’ is deprecated [-Wdeprecated-declarations] 2023-09-08T11:03:26,494 122 | data = PyUnicode_AS_DATA(object); 2023-09-08T11:03:26,494 | ^~~~ 2023-09-08T11:03:26,495 /usr/include/python3.11/cpython/unicodeobject.h:702:27: note: declared here 2023-09-08T11:03:26,495 702 | static inline const char* PyUnicode_AS_DATA(PyObject *op) 2023-09-08T11:03:26,496 | ^~~~~~~~~~~~~~~~~ 2023-09-08T11:03:26,496 Bio/Cluster/clustermodule.c: In function ‘parse_clusterid’: 2023-09-08T11:03:26,497 Bio/Cluster/clustermodule.c:531:28: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘npy_intp’ {aka ‘int’} [-Wsign-compare] 2023-09-08T11:03:26,497 531 | if (nitems!=1 && nitems!=PyArray_DIM(*array, 0)) 2023-09-08T11:03:26,498 | ^~ 2023-09-08T11:03:29,379 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/Bio/Cluster/cluster.o build/temp.linux-armv7l-cpython-311/Bio/Cluster/clustermodule.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/Bio/Cluster/cluster.cpython-311-arm-linux-gnueabihf.so 2023-09-08T11:03:29,487 building 'Bio.KDTree._CKDTree' extension 2023-09-08T11:03:29,487 creating build/temp.linux-armv7l-cpython-311/Bio/KDTree 2023-09-08T11:03:29,488 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c Bio/KDTree/KDTree.c -o build/temp.linux-armv7l-cpython-311/Bio/KDTree/KDTree.o 2023-09-08T11:03:30,747 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c Bio/KDTree/KDTreemodule.c -o build/temp.linux-armv7l-cpython-311/Bio/KDTree/KDTreemodule.o 2023-09-08T11:03:31,110 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, 2023-09-08T11:03:31,111 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-08T11:03:31,112 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-08T11:03:31,112 from Bio/KDTree/KDTreemodule.c:2: 2023-09-08T11:03:31,113 /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-08T11:03:31,114 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-08T11:03:31,114 | ^~~~~~~ 2023-09-08T11:03:31,687 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/Bio/KDTree/KDTree.o build/temp.linux-armv7l-cpython-311/Bio/KDTree/KDTreemodule.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/Bio/KDTree/_CKDTree.cpython-311-arm-linux-gnueabihf.so 2023-09-08T11:03:31,787 building 'Bio.Motif._pwm' extension 2023-09-08T11:03:31,788 creating build/temp.linux-armv7l-cpython-311/Bio/Motif 2023-09-08T11:03:31,788 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c Bio/Motif/_pwm.c -o build/temp.linux-armv7l-cpython-311/Bio/Motif/_pwm.o 2023-09-08T11:03:32,150 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, 2023-09-08T11:03:32,150 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-08T11:03:32,151 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-08T11:03:32,152 from Bio/Motif/_pwm.c:2: 2023-09-08T11:03:32,152 /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-08T11:03:32,153 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-08T11:03:32,153 | ^~~~~~~ 2023-09-08T11:03:32,373 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/Bio/Motif/_pwm.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/Bio/Motif/_pwm.cpython-311-arm-linux-gnueabihf.so 2023-09-08T11:03:32,465 building 'Bio.motifs._pwm' extension 2023-09-08T11:03:32,466 creating build/temp.linux-armv7l-cpython-311/Bio/motifs 2023-09-08T11:03:32,466 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c Bio/motifs/_pwm.c -o build/temp.linux-armv7l-cpython-311/Bio/motifs/_pwm.o 2023-09-08T11:03:32,830 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1940, 2023-09-08T11:03:32,831 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-08T11:03:32,831 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-08T11:03:32,832 from Bio/motifs/_pwm.c:2: 2023-09-08T11:03:32,832 /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-08T11:03:32,833 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-08T11:03:32,834 | ^~~~~~~ 2023-09-08T11:03:33,055 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/Bio/motifs/_pwm.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/Bio/motifs/_pwm.cpython-311-arm-linux-gnueabihf.so 2023-09-08T11:03:33,148 /tmp/pip-wheel-84eu9jsd/biopython_9f392708bca64d7e8acf2f26c94e6aca/setup.py:207: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-09-08T11:03:33,148 !! 2023-09-08T11:03:33,149 ******************************************************************************** 2023-09-08T11:03:33,150 Please avoid running ``setup.py`` directly. 2023-09-08T11:03:33,151 Instead, use pypa/build, pypa/installer or other 2023-09-08T11:03:33,151 standards-based tools. 2023-09-08T11:03:33,153 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-09-08T11:03:33,153 ******************************************************************************** 2023-09-08T11:03:33,154 !! 2023-09-08T11:03:33,155 install.initialize_options(self) 2023-09-08T11:03:33,169 installing to build/bdist.linux-armv7l/wheel 2023-09-08T11:03:33,170 running install 2023-09-08T11:03:33,193 running install_lib 2023-09-08T11:03:33,214 creating build/bdist.linux-armv7l 2023-09-08T11:03:33,214 creating build/bdist.linux-armv7l/wheel 2023-09-08T11:03:33,216 creating build/bdist.linux-armv7l/wheel/BioSQL 2023-09-08T11:03:33,217 copying build/lib.linux-armv7l-cpython-311/BioSQL/BioSeq.py -> build/bdist.linux-armv7l/wheel/BioSQL 2023-09-08T11:03:33,220 copying build/lib.linux-armv7l-cpython-311/BioSQL/Loader.py -> build/bdist.linux-armv7l/wheel/BioSQL 2023-09-08T11:03:33,223 copying build/lib.linux-armv7l-cpython-311/BioSQL/__init__.py -> build/bdist.linux-armv7l/wheel/BioSQL 2023-09-08T11:03:33,225 copying build/lib.linux-armv7l-cpython-311/BioSQL/DBUtils.py -> build/bdist.linux-armv7l/wheel/BioSQL 2023-09-08T11:03:33,227 copying build/lib.linux-armv7l-cpython-311/BioSQL/BioSeqDatabase.py -> build/bdist.linux-armv7l/wheel/BioSQL 2023-09-08T11:03:33,231 creating build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:33,232 creating build/bdist.linux-armv7l/wheel/Bio/Restriction 2023-09-08T11:03:33,233 copying build/lib.linux-armv7l-cpython-311/Bio/Restriction/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Restriction 2023-09-08T11:03:33,236 copying build/lib.linux-armv7l-cpython-311/Bio/Restriction/RanaConfig.py -> build/bdist.linux-armv7l/wheel/Bio/Restriction 2023-09-08T11:03:33,237 copying build/lib.linux-armv7l-cpython-311/Bio/Restriction/Restriction_Dictionary.py -> build/bdist.linux-armv7l/wheel/Bio/Restriction 2023-09-08T11:03:33,247 copying build/lib.linux-armv7l-cpython-311/Bio/Restriction/Restriction.py -> build/bdist.linux-armv7l/wheel/Bio/Restriction 2023-09-08T11:03:33,250 creating build/bdist.linux-armv7l/wheel/Bio/Restriction/_Update 2023-09-08T11:03:33,251 copying build/lib.linux-armv7l-cpython-311/Bio/Restriction/_Update/RestrictionCompiler.py -> build/bdist.linux-armv7l/wheel/Bio/Restriction/_Update 2023-09-08T11:03:33,254 copying build/lib.linux-armv7l-cpython-311/Bio/Restriction/_Update/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Restriction/_Update 2023-09-08T11:03:33,256 copying build/lib.linux-armv7l-cpython-311/Bio/Restriction/_Update/Update.py -> build/bdist.linux-armv7l/wheel/Bio/Restriction/_Update 2023-09-08T11:03:33,258 copying build/lib.linux-armv7l-cpython-311/Bio/Restriction/PrintFormat.py -> build/bdist.linux-armv7l/wheel/Bio/Restriction 2023-09-08T11:03:33,261 creating build/bdist.linux-armv7l/wheel/Bio/SCOP 2023-09-08T11:03:33,262 copying build/lib.linux-armv7l-cpython-311/Bio/SCOP/Raf.py -> build/bdist.linux-armv7l/wheel/Bio/SCOP 2023-09-08T11:03:33,264 copying build/lib.linux-armv7l-cpython-311/Bio/SCOP/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/SCOP 2023-09-08T11:03:33,267 copying build/lib.linux-armv7l-cpython-311/Bio/SCOP/Des.py -> build/bdist.linux-armv7l/wheel/Bio/SCOP 2023-09-08T11:03:33,269 copying build/lib.linux-armv7l-cpython-311/Bio/SCOP/Hie.py -> build/bdist.linux-armv7l/wheel/Bio/SCOP 2023-09-08T11:03:33,271 copying build/lib.linux-armv7l-cpython-311/Bio/SCOP/Cla.py -> build/bdist.linux-armv7l/wheel/Bio/SCOP 2023-09-08T11:03:33,273 copying build/lib.linux-armv7l-cpython-311/Bio/SCOP/three_to_one_dict.py -> build/bdist.linux-armv7l/wheel/Bio/SCOP 2023-09-08T11:03:33,275 copying build/lib.linux-armv7l-cpython-311/Bio/SCOP/Residues.py -> build/bdist.linux-armv7l/wheel/Bio/SCOP 2023-09-08T11:03:33,277 copying build/lib.linux-armv7l-cpython-311/Bio/SCOP/Dom.py -> build/bdist.linux-armv7l/wheel/Bio/SCOP 2023-09-08T11:03:33,280 creating build/bdist.linux-armv7l/wheel/Bio/SwissProt 2023-09-08T11:03:33,280 copying build/lib.linux-armv7l-cpython-311/Bio/SwissProt/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/SwissProt 2023-09-08T11:03:33,283 copying build/lib.linux-armv7l-cpython-311/Bio/SwissProt/KeyWList.py -> build/bdist.linux-armv7l/wheel/Bio/SwissProt 2023-09-08T11:03:33,286 creating build/bdist.linux-armv7l/wheel/Bio/Compass 2023-09-08T11:03:33,287 copying build/lib.linux-armv7l-cpython-311/Bio/Compass/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Compass 2023-09-08T11:03:33,290 creating build/bdist.linux-armv7l/wheel/Bio/Blast 2023-09-08T11:03:33,291 copying build/lib.linux-armv7l-cpython-311/Bio/Blast/NCBIXML.py -> build/bdist.linux-armv7l/wheel/Bio/Blast 2023-09-08T11:03:33,294 copying build/lib.linux-armv7l-cpython-311/Bio/Blast/NCBIStandalone.py -> build/bdist.linux-armv7l/wheel/Bio/Blast 2023-09-08T11:03:33,297 copying build/lib.linux-armv7l-cpython-311/Bio/Blast/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Blast 2023-09-08T11:03:33,299 copying build/lib.linux-armv7l-cpython-311/Bio/Blast/Applications.py -> build/bdist.linux-armv7l/wheel/Bio/Blast 2023-09-08T11:03:33,302 copying build/lib.linux-armv7l-cpython-311/Bio/Blast/NCBIWWW.py -> build/bdist.linux-armv7l/wheel/Bio/Blast 2023-09-08T11:03:33,305 copying build/lib.linux-armv7l-cpython-311/Bio/Blast/Record.py -> build/bdist.linux-armv7l/wheel/Bio/Blast 2023-09-08T11:03:33,307 copying build/lib.linux-armv7l-cpython-311/Bio/Blast/ParseBlastTable.py -> build/bdist.linux-armv7l/wheel/Bio/Blast 2023-09-08T11:03:33,309 creating build/bdist.linux-armv7l/wheel/Bio/GenBank 2023-09-08T11:03:33,310 copying build/lib.linux-armv7l-cpython-311/Bio/GenBank/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/GenBank 2023-09-08T11:03:33,313 copying build/lib.linux-armv7l-cpython-311/Bio/GenBank/Record.py -> build/bdist.linux-armv7l/wheel/Bio/GenBank 2023-09-08T11:03:33,315 copying build/lib.linux-armv7l-cpython-311/Bio/GenBank/utils.py -> build/bdist.linux-armv7l/wheel/Bio/GenBank 2023-09-08T11:03:33,317 copying build/lib.linux-armv7l-cpython-311/Bio/GenBank/Scanner.py -> build/bdist.linux-armv7l/wheel/Bio/GenBank 2023-09-08T11:03:33,321 creating build/bdist.linux-armv7l/wheel/Bio/Affy 2023-09-08T11:03:33,322 copying build/lib.linux-armv7l-cpython-311/Bio/Affy/CelFile.py -> build/bdist.linux-armv7l/wheel/Bio/Affy 2023-09-08T11:03:33,324 copying build/lib.linux-armv7l-cpython-311/Bio/Affy/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Affy 2023-09-08T11:03:33,326 copying build/lib.linux-armv7l-cpython-311/Bio/MaxEntropy.py -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:33,328 copying build/lib.linux-armv7l-cpython-311/Bio/ParserSupport.py -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:33,331 creating build/bdist.linux-armv7l/wheel/Bio/Graphics 2023-09-08T11:03:33,332 copying build/lib.linux-armv7l-cpython-311/Bio/Graphics/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Graphics 2023-09-08T11:03:33,335 creating build/bdist.linux-armv7l/wheel/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:33,336 copying build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:33,338 copying build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram/_Feature.py -> build/bdist.linux-armv7l/wheel/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:33,340 copying build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/bdist.linux-armv7l/wheel/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:33,343 copying build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram/_Graph.py -> build/bdist.linux-armv7l/wheel/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:33,345 copying build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/bdist.linux-armv7l/wheel/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:33,348 copying build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram/_Track.py -> build/bdist.linux-armv7l/wheel/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:33,351 copying build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/bdist.linux-armv7l/wheel/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:33,353 copying build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/bdist.linux-armv7l/wheel/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:33,355 copying build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/bdist.linux-armv7l/wheel/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:33,357 copying build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/bdist.linux-armv7l/wheel/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:33,360 copying build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram/_Colors.py -> build/bdist.linux-armv7l/wheel/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:33,363 copying build/lib.linux-armv7l-cpython-311/Bio/Graphics/GenomeDiagram/_Diagram.py -> build/bdist.linux-armv7l/wheel/Bio/Graphics/GenomeDiagram 2023-09-08T11:03:33,365 copying build/lib.linux-armv7l-cpython-311/Bio/Graphics/Distribution.py -> build/bdist.linux-armv7l/wheel/Bio/Graphics 2023-09-08T11:03:33,367 copying build/lib.linux-armv7l-cpython-311/Bio/Graphics/ColorSpiral.py -> build/bdist.linux-armv7l/wheel/Bio/Graphics 2023-09-08T11:03:33,370 copying build/lib.linux-armv7l-cpython-311/Bio/Graphics/Comparative.py -> build/bdist.linux-armv7l/wheel/Bio/Graphics 2023-09-08T11:03:33,371 copying build/lib.linux-armv7l-cpython-311/Bio/Graphics/BasicChromosome.py -> build/bdist.linux-armv7l/wheel/Bio/Graphics 2023-09-08T11:03:33,374 copying build/lib.linux-armv7l-cpython-311/Bio/Graphics/DisplayRepresentation.py -> build/bdist.linux-armv7l/wheel/Bio/Graphics 2023-09-08T11:03:33,376 creating build/bdist.linux-armv7l/wheel/Bio/Emboss 2023-09-08T11:03:33,377 copying build/lib.linux-armv7l-cpython-311/Bio/Emboss/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Emboss 2023-09-08T11:03:33,379 copying build/lib.linux-armv7l-cpython-311/Bio/Emboss/Applications.py -> build/bdist.linux-armv7l/wheel/Bio/Emboss 2023-09-08T11:03:33,382 copying build/lib.linux-armv7l-cpython-311/Bio/Emboss/PrimerSearch.py -> build/bdist.linux-armv7l/wheel/Bio/Emboss 2023-09-08T11:03:33,384 copying build/lib.linux-armv7l-cpython-311/Bio/Emboss/Primer3.py -> build/bdist.linux-armv7l/wheel/Bio/Emboss 2023-09-08T11:03:33,386 copying build/lib.linux-armv7l-cpython-311/Bio/pairwise2.py -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:33,388 copying build/lib.linux-armv7l-cpython-311/Bio/SeqFeature.py -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:33,391 copying build/lib.linux-armv7l-cpython-311/Bio/LogisticRegression.py -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:33,394 creating build/bdist.linux-armv7l/wheel/Bio/Entrez 2023-09-08T11:03:33,395 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/Parser.py -> build/bdist.linux-armv7l/wheel/Bio/Entrez 2023-09-08T11:03:33,398 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Entrez 2023-09-08T11:03:33,403 creating build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,404 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,406 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/HomoloGene.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,407 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/eSpell.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,409 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isotech.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,412 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,414 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,416 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isogrk1.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,418 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/chars.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,420 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/references.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,423 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/common.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,428 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isoamso.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,430 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/egquery.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,432 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isogrk2.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,434 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/math.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,436 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,439 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,441 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,443 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,445 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isoamsr.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,447 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,449 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,451 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/articlemeta.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,454 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,457 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/xmlspecchars.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,459 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,461 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,463 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isolat1.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,465 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,467 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/eInfo_020511.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,469 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isogrk3.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,471 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,473 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,475 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/pubmed_120101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,477 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/archivearticle.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,480 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/ePost_020511.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,482 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,484 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/elink_020122.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,486 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,488 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,490 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isodia.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,492 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/format.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,494 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,497 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/archivecustom-modules.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,499 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/notat.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,501 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/para.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,503 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,505 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/bookdoc_110101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,506 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,508 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isoamsn.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,510 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,512 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,514 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isoamsa.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,517 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/pubmed_110101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,518 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isolat2.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,520 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/mmlextra.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,522 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,524 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,526 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isomfrk.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,528 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,530 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,532 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,534 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,538 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isomscr.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,540 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/default-classes.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,543 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,545 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,547 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/eLink_090910.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,549 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,551 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isopub.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,553 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,555 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,556 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,558 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,560 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/default-mixes.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,562 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isoamsc.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,564 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isoamsb.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,566 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/eLink_020511.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,568 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/mmlalias.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,570 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isobox.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,572 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/pubmed_080101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,574 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,576 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/SP_General.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,577 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,579 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/archivecustom-models.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,582 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,584 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/link.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,586 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/eSummary_041029.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,588 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/archivecustom-classes.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,590 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/section.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,592 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/backmatter.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,595 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/eSearch_020511.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,597 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/eLink_101123.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,599 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,601 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/journalmeta.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,603 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,605 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,607 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/modules.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,610 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isocyr1.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,612 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,613 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/pubmed_100101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,615 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,617 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,619 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/pubmed_020114.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,621 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isocyr2.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,623 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isogrk4.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,624 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/display.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,628 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isonum.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,630 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/isomopf.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,631 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,633 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,635 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/pubmed_090101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,637 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/mathmlsetup.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,639 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,641 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,643 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/list.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,646 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/mathml2.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,649 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,651 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,653 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/phrase.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,655 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,657 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,659 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,662 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,664 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/pmc-1.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,666 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/htmltable.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,668 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/taxon.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,670 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,672 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,674 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,676 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,679 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,681 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/pubmed_130101.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,683 copying build/lib.linux-armv7l-cpython-311/Bio/Entrez/DTDs/pubmed_100301.dtd -> build/bdist.linux-armv7l/wheel/Bio/Entrez/DTDs 2023-09-08T11:03:33,686 copying build/lib.linux-armv7l-cpython-311/Bio/MarkovModel.py -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:33,689 copying build/lib.linux-armv7l-cpython-311/Bio/__init__.py -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:33,692 creating build/bdist.linux-armv7l/wheel/Bio/NeuralNetwork 2023-09-08T11:03:33,694 copying build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/NeuralNetwork 2023-09-08T11:03:33,697 creating build/bdist.linux-armv7l/wheel/Bio/NeuralNetwork/Gene 2023-09-08T11:03:33,698 copying build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/Gene/Signature.py -> build/bdist.linux-armv7l/wheel/Bio/NeuralNetwork/Gene 2023-09-08T11:03:33,701 copying build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/Gene/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/NeuralNetwork/Gene 2023-09-08T11:03:33,703 copying build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/Gene/Schema.py -> build/bdist.linux-armv7l/wheel/Bio/NeuralNetwork/Gene 2023-09-08T11:03:33,707 copying build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/Gene/Motif.py -> build/bdist.linux-armv7l/wheel/Bio/NeuralNetwork/Gene 2023-09-08T11:03:33,709 copying build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/Gene/Pattern.py -> build/bdist.linux-armv7l/wheel/Bio/NeuralNetwork/Gene 2023-09-08T11:03:33,713 creating build/bdist.linux-armv7l/wheel/Bio/NeuralNetwork/BackPropagation 2023-09-08T11:03:33,714 copying build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/BackPropagation/Layer.py -> build/bdist.linux-armv7l/wheel/Bio/NeuralNetwork/BackPropagation 2023-09-08T11:03:33,718 copying build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/BackPropagation/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/NeuralNetwork/BackPropagation 2023-09-08T11:03:33,720 copying build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/BackPropagation/Network.py -> build/bdist.linux-armv7l/wheel/Bio/NeuralNetwork/BackPropagation 2023-09-08T11:03:33,722 copying build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/StopTraining.py -> build/bdist.linux-armv7l/wheel/Bio/NeuralNetwork 2023-09-08T11:03:33,725 copying build/lib.linux-armv7l-cpython-311/Bio/NeuralNetwork/Training.py -> build/bdist.linux-armv7l/wheel/Bio/NeuralNetwork 2023-09-08T11:03:33,728 creating build/bdist.linux-armv7l/wheel/Bio/Nexus 2023-09-08T11:03:33,729 copying build/lib.linux-armv7l-cpython-311/Bio/Nexus/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Nexus 2023-09-08T11:03:33,731 copying build/lib.linux-armv7l-cpython-311/Bio/Nexus/Nexus.py -> build/bdist.linux-armv7l/wheel/Bio/Nexus 2023-09-08T11:03:33,736 copying build/lib.linux-armv7l-cpython-311/Bio/Nexus/Trees.py -> build/bdist.linux-armv7l/wheel/Bio/Nexus 2023-09-08T11:03:33,740 copying build/lib.linux-armv7l-cpython-311/Bio/Nexus/Nodes.py -> build/bdist.linux-armv7l/wheel/Bio/Nexus 2023-09-08T11:03:33,742 copying build/lib.linux-armv7l-cpython-311/Bio/Nexus/cnexus.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/Bio/Nexus 2023-09-08T11:03:33,746 creating build/bdist.linux-armv7l/wheel/Bio/UniGene 2023-09-08T11:03:33,747 copying build/lib.linux-armv7l-cpython-311/Bio/UniGene/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/UniGene 2023-09-08T11:03:33,750 copying build/lib.linux-armv7l-cpython-311/Bio/UniGene/UniGene.py -> build/bdist.linux-armv7l/wheel/Bio/UniGene 2023-09-08T11:03:33,753 creating build/bdist.linux-armv7l/wheel/Bio/Application 2023-09-08T11:03:33,754 copying build/lib.linux-armv7l-cpython-311/Bio/Application/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Application 2023-09-08T11:03:33,759 creating build/bdist.linux-armv7l/wheel/Bio/SeqIO 2023-09-08T11:03:33,760 copying build/lib.linux-armv7l-cpython-311/Bio/SeqIO/TabIO.py -> build/bdist.linux-armv7l/wheel/Bio/SeqIO 2023-09-08T11:03:33,762 copying build/lib.linux-armv7l-cpython-311/Bio/SeqIO/_index.py -> build/bdist.linux-armv7l/wheel/Bio/SeqIO 2023-09-08T11:03:33,766 copying build/lib.linux-armv7l-cpython-311/Bio/SeqIO/AceIO.py -> build/bdist.linux-armv7l/wheel/Bio/SeqIO 2023-09-08T11:03:33,768 copying build/lib.linux-armv7l-cpython-311/Bio/SeqIO/PirIO.py -> build/bdist.linux-armv7l/wheel/Bio/SeqIO 2023-09-08T11:03:33,771 copying build/lib.linux-armv7l-cpython-311/Bio/SeqIO/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/SeqIO 2023-09-08T11:03:33,775 copying build/lib.linux-armv7l-cpython-311/Bio/SeqIO/QualityIO.py -> build/bdist.linux-armv7l/wheel/Bio/SeqIO 2023-09-08T11:03:33,778 copying build/lib.linux-armv7l-cpython-311/Bio/SeqIO/_convert.py -> build/bdist.linux-armv7l/wheel/Bio/SeqIO 2023-09-08T11:03:33,781 copying build/lib.linux-armv7l-cpython-311/Bio/SeqIO/SwissIO.py -> build/bdist.linux-armv7l/wheel/Bio/SeqIO 2023-09-08T11:03:33,783 copying build/lib.linux-armv7l-cpython-311/Bio/SeqIO/UniprotIO.py -> build/bdist.linux-armv7l/wheel/Bio/SeqIO 2023-09-08T11:03:33,786 copying build/lib.linux-armv7l-cpython-311/Bio/SeqIO/SffIO.py -> build/bdist.linux-armv7l/wheel/Bio/SeqIO 2023-09-08T11:03:33,790 copying build/lib.linux-armv7l-cpython-311/Bio/SeqIO/SeqXmlIO.py -> build/bdist.linux-armv7l/wheel/Bio/SeqIO 2023-09-08T11:03:33,793 copying build/lib.linux-armv7l-cpython-311/Bio/SeqIO/IgIO.py -> build/bdist.linux-armv7l/wheel/Bio/SeqIO 2023-09-08T11:03:33,795 copying build/lib.linux-armv7l-cpython-311/Bio/SeqIO/AbiIO.py -> build/bdist.linux-armv7l/wheel/Bio/SeqIO 2023-09-08T11:03:33,798 copying build/lib.linux-armv7l-cpython-311/Bio/SeqIO/FastaIO.py -> build/bdist.linux-armv7l/wheel/Bio/SeqIO 2023-09-08T11:03:33,800 copying build/lib.linux-armv7l-cpython-311/Bio/SeqIO/PhdIO.py -> build/bdist.linux-armv7l/wheel/Bio/SeqIO 2023-09-08T11:03:33,803 copying build/lib.linux-armv7l-cpython-311/Bio/SeqIO/PdbIO.py -> build/bdist.linux-armv7l/wheel/Bio/SeqIO 2023-09-08T11:03:33,805 copying build/lib.linux-armv7l-cpython-311/Bio/SeqIO/InsdcIO.py -> build/bdist.linux-armv7l/wheel/Bio/SeqIO 2023-09-08T11:03:33,809 copying build/lib.linux-armv7l-cpython-311/Bio/SeqIO/Interfaces.py -> build/bdist.linux-armv7l/wheel/Bio/SeqIO 2023-09-08T11:03:33,812 creating build/bdist.linux-armv7l/wheel/Bio/SearchIO 2023-09-08T11:03:33,814 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/_index.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO 2023-09-08T11:03:33,816 creating build/bdist.linux-armv7l/wheel/Bio/SearchIO/ExonerateIO 2023-09-08T11:03:33,818 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/ExonerateIO 2023-09-08T11:03:33,820 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/ExonerateIO/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/ExonerateIO 2023-09-08T11:03:33,823 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/ExonerateIO 2023-09-08T11:03:33,825 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/ExonerateIO/_base.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/ExonerateIO 2023-09-08T11:03:33,828 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/ExonerateIO 2023-09-08T11:03:33,831 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO 2023-09-08T11:03:33,834 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/BlatIO.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO 2023-09-08T11:03:33,838 creating build/bdist.linux-armv7l/wheel/Bio/SearchIO/HmmerIO 2023-09-08T11:03:33,839 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/HmmerIO/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/HmmerIO 2023-09-08T11:03:33,842 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/HmmerIO 2023-09-08T11:03:33,845 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/HmmerIO 2023-09-08T11:03:33,847 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/HmmerIO 2023-09-08T11:03:33,850 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/HmmerIO 2023-09-08T11:03:33,853 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/HmmerIO/_base.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/HmmerIO 2023-09-08T11:03:33,856 creating build/bdist.linux-armv7l/wheel/Bio/SearchIO/BlastIO 2023-09-08T11:03:33,857 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/BlastIO/blast_xml.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/BlastIO 2023-09-08T11:03:33,860 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/BlastIO/blast_tab.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/BlastIO 2023-09-08T11:03:33,863 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/BlastIO/blast_text.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/BlastIO 2023-09-08T11:03:33,866 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/BlastIO/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/BlastIO 2023-09-08T11:03:33,869 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/_utils.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO 2023-09-08T11:03:33,871 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/FastaIO.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO 2023-09-08T11:03:33,875 creating build/bdist.linux-armv7l/wheel/Bio/SearchIO/_model 2023-09-08T11:03:33,876 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/_model/query.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/_model 2023-09-08T11:03:33,879 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/_model/hsp.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/_model 2023-09-08T11:03:33,883 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/_model/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/_model 2023-09-08T11:03:33,885 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/_model/hit.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/_model 2023-09-08T11:03:33,888 copying build/lib.linux-armv7l-cpython-311/Bio/SearchIO/_model/_base.py -> build/bdist.linux-armv7l/wheel/Bio/SearchIO/_model 2023-09-08T11:03:33,890 creating build/bdist.linux-armv7l/wheel/Bio/CAPS 2023-09-08T11:03:33,892 copying build/lib.linux-armv7l-cpython-311/Bio/CAPS/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/CAPS 2023-09-08T11:03:33,894 copying build/lib.linux-armv7l-cpython-311/Bio/Index.py -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:33,897 creating build/bdist.linux-armv7l/wheel/Bio/Data 2023-09-08T11:03:33,898 copying build/lib.linux-armv7l-cpython-311/Bio/Data/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Data 2023-09-08T11:03:33,900 copying build/lib.linux-armv7l-cpython-311/Bio/Data/IUPACData.py -> build/bdist.linux-armv7l/wheel/Bio/Data 2023-09-08T11:03:33,903 copying build/lib.linux-armv7l-cpython-311/Bio/Data/CodonTable.py -> build/bdist.linux-armv7l/wheel/Bio/Data 2023-09-08T11:03:33,906 creating build/bdist.linux-armv7l/wheel/Bio/AlignIO 2023-09-08T11:03:33,908 copying build/lib.linux-armv7l-cpython-311/Bio/AlignIO/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/AlignIO 2023-09-08T11:03:33,911 copying build/lib.linux-armv7l-cpython-311/Bio/AlignIO/ClustalIO.py -> build/bdist.linux-armv7l/wheel/Bio/AlignIO 2023-09-08T11:03:33,913 copying build/lib.linux-armv7l-cpython-311/Bio/AlignIO/EmbossIO.py -> build/bdist.linux-armv7l/wheel/Bio/AlignIO 2023-09-08T11:03:33,916 copying build/lib.linux-armv7l-cpython-311/Bio/AlignIO/PhylipIO.py -> build/bdist.linux-armv7l/wheel/Bio/AlignIO 2023-09-08T11:03:33,919 copying build/lib.linux-armv7l-cpython-311/Bio/AlignIO/NexusIO.py -> build/bdist.linux-armv7l/wheel/Bio/AlignIO 2023-09-08T11:03:33,921 copying build/lib.linux-armv7l-cpython-311/Bio/AlignIO/FastaIO.py -> build/bdist.linux-armv7l/wheel/Bio/AlignIO 2023-09-08T11:03:33,923 copying build/lib.linux-armv7l-cpython-311/Bio/AlignIO/StockholmIO.py -> build/bdist.linux-armv7l/wheel/Bio/AlignIO 2023-09-08T11:03:33,926 copying build/lib.linux-armv7l-cpython-311/Bio/AlignIO/Interfaces.py -> build/bdist.linux-armv7l/wheel/Bio/AlignIO 2023-09-08T11:03:33,928 creating build/bdist.linux-armv7l/wheel/Bio/_py3k 2023-09-08T11:03:33,929 copying build/lib.linux-armv7l-cpython-311/Bio/_py3k/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/_py3k 2023-09-08T11:03:33,931 copying build/lib.linux-armv7l-cpython-311/Bio/_py3k/_ordereddict.py -> build/bdist.linux-armv7l/wheel/Bio/_py3k 2023-09-08T11:03:33,933 copying build/lib.linux-armv7l-cpython-311/Bio/triefind.py -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:33,935 copying build/lib.linux-armv7l-cpython-311/Bio/Seq.py -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:33,939 creating build/bdist.linux-armv7l/wheel/Bio/GA 2023-09-08T11:03:33,940 copying build/lib.linux-armv7l-cpython-311/Bio/GA/Organism.py -> build/bdist.linux-armv7l/wheel/Bio/GA 2023-09-08T11:03:33,943 creating build/bdist.linux-armv7l/wheel/Bio/GA/Selection 2023-09-08T11:03:33,943 copying build/lib.linux-armv7l-cpython-311/Bio/GA/Selection/Diversity.py -> build/bdist.linux-armv7l/wheel/Bio/GA/Selection 2023-09-08T11:03:33,945 copying build/lib.linux-armv7l-cpython-311/Bio/GA/Selection/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/GA/Selection 2023-09-08T11:03:33,947 copying build/lib.linux-armv7l-cpython-311/Bio/GA/Selection/Abstract.py -> build/bdist.linux-armv7l/wheel/Bio/GA/Selection 2023-09-08T11:03:33,949 copying build/lib.linux-armv7l-cpython-311/Bio/GA/Selection/Tournament.py -> build/bdist.linux-armv7l/wheel/Bio/GA/Selection 2023-09-08T11:03:33,951 copying build/lib.linux-armv7l-cpython-311/Bio/GA/Selection/RouletteWheel.py -> build/bdist.linux-armv7l/wheel/Bio/GA/Selection 2023-09-08T11:03:33,953 copying build/lib.linux-armv7l-cpython-311/Bio/GA/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/GA 2023-09-08T11:03:33,956 creating build/bdist.linux-armv7l/wheel/Bio/GA/Mutation 2023-09-08T11:03:33,957 copying build/lib.linux-armv7l-cpython-311/Bio/GA/Mutation/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/GA/Mutation 2023-09-08T11:03:33,958 copying build/lib.linux-armv7l-cpython-311/Bio/GA/Mutation/Simple.py -> build/bdist.linux-armv7l/wheel/Bio/GA/Mutation 2023-09-08T11:03:33,960 copying build/lib.linux-armv7l-cpython-311/Bio/GA/Mutation/General.py -> build/bdist.linux-armv7l/wheel/Bio/GA/Mutation 2023-09-08T11:03:33,963 creating build/bdist.linux-armv7l/wheel/Bio/GA/Repair 2023-09-08T11:03:33,963 copying build/lib.linux-armv7l-cpython-311/Bio/GA/Repair/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/GA/Repair 2023-09-08T11:03:33,965 copying build/lib.linux-armv7l-cpython-311/Bio/GA/Repair/Stabilizing.py -> build/bdist.linux-armv7l/wheel/Bio/GA/Repair 2023-09-08T11:03:33,967 copying build/lib.linux-armv7l-cpython-311/Bio/GA/Evolver.py -> build/bdist.linux-armv7l/wheel/Bio/GA 2023-09-08T11:03:33,969 creating build/bdist.linux-armv7l/wheel/Bio/GA/Crossover 2023-09-08T11:03:33,970 copying build/lib.linux-armv7l-cpython-311/Bio/GA/Crossover/TwoPoint.py -> build/bdist.linux-armv7l/wheel/Bio/GA/Crossover 2023-09-08T11:03:33,972 copying build/lib.linux-armv7l-cpython-311/Bio/GA/Crossover/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/GA/Crossover 2023-09-08T11:03:33,973 copying build/lib.linux-armv7l-cpython-311/Bio/GA/Crossover/GeneralPoint.py -> build/bdist.linux-armv7l/wheel/Bio/GA/Crossover 2023-09-08T11:03:33,975 copying build/lib.linux-armv7l-cpython-311/Bio/GA/Crossover/Point.py -> build/bdist.linux-armv7l/wheel/Bio/GA/Crossover 2023-09-08T11:03:33,977 copying build/lib.linux-armv7l-cpython-311/Bio/GA/Crossover/Uniform.py -> build/bdist.linux-armv7l/wheel/Bio/GA/Crossover 2023-09-08T11:03:33,979 copying build/lib.linux-armv7l-cpython-311/Bio/GA/Crossover/General.py -> build/bdist.linux-armv7l/wheel/Bio/GA/Crossover 2023-09-08T11:03:33,981 copying build/lib.linux-armv7l-cpython-311/Bio/File.py -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:33,983 creating build/bdist.linux-armv7l/wheel/Bio/Align 2023-09-08T11:03:33,984 copying build/lib.linux-armv7l-cpython-311/Bio/Align/Generic.py -> build/bdist.linux-armv7l/wheel/Bio/Align 2023-09-08T11:03:33,987 copying build/lib.linux-armv7l-cpython-311/Bio/Align/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Align 2023-09-08T11:03:33,989 copying build/lib.linux-armv7l-cpython-311/Bio/Align/AlignInfo.py -> build/bdist.linux-armv7l/wheel/Bio/Align 2023-09-08T11:03:33,992 creating build/bdist.linux-armv7l/wheel/Bio/Align/Applications 2023-09-08T11:03:33,993 copying build/lib.linux-armv7l-cpython-311/Bio/Align/Applications/_Clustalw.py -> build/bdist.linux-armv7l/wheel/Bio/Align/Applications 2023-09-08T11:03:33,996 copying build/lib.linux-armv7l-cpython-311/Bio/Align/Applications/_ClustalOmega.py -> build/bdist.linux-armv7l/wheel/Bio/Align/Applications 2023-09-08T11:03:33,998 copying build/lib.linux-armv7l-cpython-311/Bio/Align/Applications/_TCoffee.py -> build/bdist.linux-armv7l/wheel/Bio/Align/Applications 2023-09-08T11:03:34,000 copying build/lib.linux-armv7l-cpython-311/Bio/Align/Applications/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Align/Applications 2023-09-08T11:03:34,002 copying build/lib.linux-armv7l-cpython-311/Bio/Align/Applications/_Mafft.py -> build/bdist.linux-armv7l/wheel/Bio/Align/Applications 2023-09-08T11:03:34,005 copying build/lib.linux-armv7l-cpython-311/Bio/Align/Applications/_Prank.py -> build/bdist.linux-armv7l/wheel/Bio/Align/Applications 2023-09-08T11:03:34,007 copying build/lib.linux-armv7l-cpython-311/Bio/Align/Applications/_Probcons.py -> build/bdist.linux-armv7l/wheel/Bio/Align/Applications 2023-09-08T11:03:34,009 copying build/lib.linux-armv7l-cpython-311/Bio/Align/Applications/_Muscle.py -> build/bdist.linux-armv7l/wheel/Bio/Align/Applications 2023-09-08T11:03:34,012 copying build/lib.linux-armv7l-cpython-311/Bio/Align/Applications/_Dialign.py -> build/bdist.linux-armv7l/wheel/Bio/Align/Applications 2023-09-08T11:03:34,014 creating build/bdist.linux-armv7l/wheel/Bio/Wise 2023-09-08T11:03:34,015 copying build/lib.linux-armv7l-cpython-311/Bio/Wise/psw.py -> build/bdist.linux-armv7l/wheel/Bio/Wise 2023-09-08T11:03:34,017 copying build/lib.linux-armv7l-cpython-311/Bio/Wise/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Wise 2023-09-08T11:03:34,019 copying build/lib.linux-armv7l-cpython-311/Bio/Wise/dnal.py -> build/bdist.linux-armv7l/wheel/Bio/Wise 2023-09-08T11:03:34,022 copying build/lib.linux-armv7l-cpython-311/Bio/kNN.py -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:34,024 creating build/bdist.linux-armv7l/wheel/Bio/SVDSuperimposer 2023-09-08T11:03:34,025 copying build/lib.linux-armv7l-cpython-311/Bio/SVDSuperimposer/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/SVDSuperimposer 2023-09-08T11:03:34,027 copying build/lib.linux-armv7l-cpython-311/Bio/SVDSuperimposer/SVDSuperimposer.py -> build/bdist.linux-armv7l/wheel/Bio/SVDSuperimposer 2023-09-08T11:03:34,029 creating build/bdist.linux-armv7l/wheel/Bio/Crystal 2023-09-08T11:03:34,030 copying build/lib.linux-armv7l-cpython-311/Bio/Crystal/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Crystal 2023-09-08T11:03:34,033 creating build/bdist.linux-armv7l/wheel/Bio/SeqUtils 2023-09-08T11:03:34,033 copying build/lib.linux-armv7l-cpython-311/Bio/SeqUtils/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/SeqUtils 2023-09-08T11:03:34,036 copying build/lib.linux-armv7l-cpython-311/Bio/SeqUtils/MeltingTemp.py -> build/bdist.linux-armv7l/wheel/Bio/SeqUtils 2023-09-08T11:03:34,038 copying build/lib.linux-armv7l-cpython-311/Bio/SeqUtils/ProtParam.py -> build/bdist.linux-armv7l/wheel/Bio/SeqUtils 2023-09-08T11:03:34,041 copying build/lib.linux-armv7l-cpython-311/Bio/SeqUtils/lcc.py -> build/bdist.linux-armv7l/wheel/Bio/SeqUtils 2023-09-08T11:03:34,044 copying build/lib.linux-armv7l-cpython-311/Bio/SeqUtils/CodonUsageIndices.py -> build/bdist.linux-armv7l/wheel/Bio/SeqUtils 2023-09-08T11:03:34,046 copying build/lib.linux-armv7l-cpython-311/Bio/SeqUtils/CodonUsage.py -> build/bdist.linux-armv7l/wheel/Bio/SeqUtils 2023-09-08T11:03:34,049 copying build/lib.linux-armv7l-cpython-311/Bio/SeqUtils/CheckSum.py -> build/bdist.linux-armv7l/wheel/Bio/SeqUtils 2023-09-08T11:03:34,051 copying build/lib.linux-armv7l-cpython-311/Bio/SeqUtils/IsoelectricPoint.py -> build/bdist.linux-armv7l/wheel/Bio/SeqUtils 2023-09-08T11:03:34,053 copying build/lib.linux-armv7l-cpython-311/Bio/SeqUtils/ProtParamData.py -> build/bdist.linux-armv7l/wheel/Bio/SeqUtils 2023-09-08T11:03:34,055 copying build/lib.linux-armv7l-cpython-311/Bio/NaiveBayes.py -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:34,058 creating build/bdist.linux-armv7l/wheel/Bio/Geo 2023-09-08T11:03:34,060 copying build/lib.linux-armv7l-cpython-311/Bio/Geo/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Geo 2023-09-08T11:03:34,062 copying build/lib.linux-armv7l-cpython-311/Bio/Geo/Record.py -> build/bdist.linux-armv7l/wheel/Bio/Geo 2023-09-08T11:03:34,065 creating build/bdist.linux-armv7l/wheel/Bio/Sequencing 2023-09-08T11:03:34,066 copying build/lib.linux-armv7l-cpython-311/Bio/Sequencing/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Sequencing 2023-09-08T11:03:34,068 copying build/lib.linux-armv7l-cpython-311/Bio/Sequencing/Ace.py -> build/bdist.linux-armv7l/wheel/Bio/Sequencing 2023-09-08T11:03:34,071 copying build/lib.linux-armv7l-cpython-311/Bio/Sequencing/Phd.py -> build/bdist.linux-armv7l/wheel/Bio/Sequencing 2023-09-08T11:03:34,074 creating build/bdist.linux-armv7l/wheel/Bio/Sequencing/Applications 2023-09-08T11:03:34,075 copying build/lib.linux-armv7l-cpython-311/Bio/Sequencing/Applications/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Sequencing/Applications 2023-09-08T11:03:34,077 copying build/lib.linux-armv7l-cpython-311/Bio/Sequencing/Applications/_Novoalign.py -> build/bdist.linux-armv7l/wheel/Bio/Sequencing/Applications 2023-09-08T11:03:34,080 copying build/lib.linux-armv7l-cpython-311/Bio/Search.py -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:34,083 copying build/lib.linux-armv7l-cpython-311/Bio/SeqRecord.py -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:34,087 creating build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,088 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/Model.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,090 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/FragmentMapper.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,093 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/PDBParser.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,095 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/parse_pdb_header.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,098 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/Polypeptide.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,101 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/DSSP.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,103 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/NACCESS.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,106 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/NeighborSearch.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,108 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/Dice.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,110 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,112 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/Entity.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,115 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/ResidueDepth.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,117 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/Selection.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,119 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/Vector.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,122 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/PDBIO.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,124 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/PDBExceptions.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,126 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/StructureAlignment.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,129 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/Residue.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,132 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/Chain.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,134 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/PDBList.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,137 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/Structure.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,139 creating build/bdist.linux-armv7l/wheel/Bio/PDB/mmCIF 2023-09-08T11:03:34,140 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/mmCIF/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/PDB/mmCIF 2023-09-08T11:03:34,142 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/AbstractPropertyMap.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,144 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/MMCIFParser.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,147 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/MMCIF2Dict.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,149 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/Atom.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,152 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/Superimposer.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,154 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/HSExposure.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,157 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/PSEA.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,159 copying build/lib.linux-armv7l-cpython-311/Bio/PDB/StructureBuilder.py -> build/bdist.linux-armv7l/wheel/Bio/PDB 2023-09-08T11:03:34,162 creating build/bdist.linux-armv7l/wheel/Bio/Pathway 2023-09-08T11:03:34,163 creating build/bdist.linux-armv7l/wheel/Bio/Pathway/Rep 2023-09-08T11:03:34,165 copying build/lib.linux-armv7l-cpython-311/Bio/Pathway/Rep/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Pathway/Rep 2023-09-08T11:03:34,167 copying build/lib.linux-armv7l-cpython-311/Bio/Pathway/Rep/HashSet.py -> build/bdist.linux-armv7l/wheel/Bio/Pathway/Rep 2023-09-08T11:03:34,169 copying build/lib.linux-armv7l-cpython-311/Bio/Pathway/Rep/Graph.py -> build/bdist.linux-armv7l/wheel/Bio/Pathway/Rep 2023-09-08T11:03:34,172 copying build/lib.linux-armv7l-cpython-311/Bio/Pathway/Rep/MultiGraph.py -> build/bdist.linux-armv7l/wheel/Bio/Pathway/Rep 2023-09-08T11:03:34,174 copying build/lib.linux-armv7l-cpython-311/Bio/Pathway/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Pathway 2023-09-08T11:03:34,177 creating build/bdist.linux-armv7l/wheel/Bio/NMR 2023-09-08T11:03:34,178 copying build/lib.linux-armv7l-cpython-311/Bio/NMR/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/NMR 2023-09-08T11:03:34,181 copying build/lib.linux-armv7l-cpython-311/Bio/NMR/NOEtools.py -> build/bdist.linux-armv7l/wheel/Bio/NMR 2023-09-08T11:03:34,183 copying build/lib.linux-armv7l-cpython-311/Bio/NMR/xpktools.py -> build/bdist.linux-armv7l/wheel/Bio/NMR 2023-09-08T11:03:34,185 copying build/lib.linux-armv7l-cpython-311/Bio/cpairwise2.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:34,189 creating build/bdist.linux-armv7l/wheel/Bio/FSSP 2023-09-08T11:03:34,190 copying build/lib.linux-armv7l-cpython-311/Bio/FSSP/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/FSSP 2023-09-08T11:03:34,193 copying build/lib.linux-armv7l-cpython-311/Bio/FSSP/fssp_rec.py -> build/bdist.linux-armv7l/wheel/Bio/FSSP 2023-09-08T11:03:34,195 copying build/lib.linux-armv7l-cpython-311/Bio/FSSP/FSSPTools.py -> build/bdist.linux-armv7l/wheel/Bio/FSSP 2023-09-08T11:03:34,197 copying build/lib.linux-armv7l-cpython-311/Bio/_utils.py -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:34,199 copying build/lib.linux-armv7l-cpython-311/Bio/HotRand.py -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:34,202 creating build/bdist.linux-armv7l/wheel/Bio/TogoWS 2023-09-08T11:03:34,203 copying build/lib.linux-armv7l-cpython-311/Bio/TogoWS/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/TogoWS 2023-09-08T11:03:34,206 creating build/bdist.linux-armv7l/wheel/Bio/Statistics 2023-09-08T11:03:34,208 copying build/lib.linux-armv7l-cpython-311/Bio/Statistics/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Statistics 2023-09-08T11:03:34,210 copying build/lib.linux-armv7l-cpython-311/Bio/Statistics/lowess.py -> build/bdist.linux-armv7l/wheel/Bio/Statistics 2023-09-08T11:03:34,213 creating build/bdist.linux-armv7l/wheel/Bio/Phylo 2023-09-08T11:03:34,214 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/_io.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo 2023-09-08T11:03:34,217 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo 2023-09-08T11:03:34,219 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/BaseTree.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo 2023-09-08T11:03:34,222 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/NexusIO.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo 2023-09-08T11:03:34,225 creating build/bdist.linux-armv7l/wheel/Bio/Phylo/PAML 2023-09-08T11:03:34,226 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/PAML/_parse_yn00.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo/PAML 2023-09-08T11:03:34,229 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/PAML/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo/PAML 2023-09-08T11:03:34,231 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/PAML/codeml.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo/PAML 2023-09-08T11:03:34,234 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/PAML/baseml.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo/PAML 2023-09-08T11:03:34,237 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/PAML/_paml.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo/PAML 2023-09-08T11:03:34,239 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/PAML/yn00.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo/PAML 2023-09-08T11:03:34,242 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/PAML/_parse_codeml.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo/PAML 2023-09-08T11:03:34,245 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/PAML/_parse_baseml.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo/PAML 2023-09-08T11:03:34,248 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/PAML/chi2.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo/PAML 2023-09-08T11:03:34,250 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/_utils.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo 2023-09-08T11:03:34,252 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/Newick.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo 2023-09-08T11:03:34,254 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/PhyloXML.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo 2023-09-08T11:03:34,256 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/PhyloXMLIO.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo 2023-09-08T11:03:34,259 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/NewickIO.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo 2023-09-08T11:03:34,262 creating build/bdist.linux-armv7l/wheel/Bio/Phylo/Applications 2023-09-08T11:03:34,262 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/Applications/_Raxml.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo/Applications 2023-09-08T11:03:34,265 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/Applications/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo/Applications 2023-09-08T11:03:34,267 copying build/lib.linux-armv7l-cpython-311/Bio/Phylo/Applications/_Phyml.py -> build/bdist.linux-armv7l/wheel/Bio/Phylo/Applications 2023-09-08T11:03:34,269 creating build/bdist.linux-armv7l/wheel/Bio/PopGen 2023-09-08T11:03:34,271 creating build/bdist.linux-armv7l/wheel/Bio/PopGen/Async 2023-09-08T11:03:34,272 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/Async/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/PopGen/Async 2023-09-08T11:03:34,274 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/Async/Local.py -> build/bdist.linux-armv7l/wheel/Bio/PopGen/Async 2023-09-08T11:03:34,276 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/PopGen 2023-09-08T11:03:34,278 creating build/bdist.linux-armv7l/wheel/Bio/PopGen/GenePop 2023-09-08T11:03:34,279 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/GenePop/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/PopGen/GenePop 2023-09-08T11:03:34,281 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/GenePop/FileParser.py -> build/bdist.linux-armv7l/wheel/Bio/PopGen/GenePop 2023-09-08T11:03:34,283 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/GenePop/Utils.py -> build/bdist.linux-armv7l/wheel/Bio/PopGen/GenePop 2023-09-08T11:03:34,285 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/GenePop/EasyController.py -> build/bdist.linux-armv7l/wheel/Bio/PopGen/GenePop 2023-09-08T11:03:34,287 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/GenePop/Controller.py -> build/bdist.linux-armv7l/wheel/Bio/PopGen/GenePop 2023-09-08T11:03:34,290 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/GenePop/LargeFileParser.py -> build/bdist.linux-armv7l/wheel/Bio/PopGen/GenePop 2023-09-08T11:03:34,292 creating build/bdist.linux-armv7l/wheel/Bio/PopGen/SimCoal 2023-09-08T11:03:34,293 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/PopGen/SimCoal 2023-09-08T11:03:34,295 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/Template.py -> build/bdist.linux-armv7l/wheel/Bio/PopGen/SimCoal 2023-09-08T11:03:34,298 creating build/bdist.linux-armv7l/wheel/Bio/PopGen/SimCoal/data 2023-09-08T11:03:34,299 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data/split_island.par -> build/bdist.linux-armv7l/wheel/Bio/PopGen/SimCoal/data 2023-09-08T11:03:34,301 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data/simple.par -> build/bdist.linux-armv7l/wheel/Bio/PopGen/SimCoal/data 2023-09-08T11:03:34,303 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data/island.par -> build/bdist.linux-armv7l/wheel/Bio/PopGen/SimCoal/data 2023-09-08T11:03:34,304 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data/decline_lambda.par -> build/bdist.linux-armv7l/wheel/Bio/PopGen/SimCoal/data 2023-09-08T11:03:34,306 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data/split_ssm_2d.par -> build/bdist.linux-armv7l/wheel/Bio/PopGen/SimCoal/data 2023-09-08T11:03:34,308 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data/bottle.par -> build/bdist.linux-armv7l/wheel/Bio/PopGen/SimCoal/data 2023-09-08T11:03:34,310 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data/split_ssm_1d.par -> build/bdist.linux-armv7l/wheel/Bio/PopGen/SimCoal/data 2023-09-08T11:03:34,311 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data/ssm_1d.par -> build/bdist.linux-armv7l/wheel/Bio/PopGen/SimCoal/data 2023-09-08T11:03:34,313 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data/decline_split.par -> build/bdist.linux-armv7l/wheel/Bio/PopGen/SimCoal/data 2023-09-08T11:03:34,315 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/data/ssm_2d.par -> build/bdist.linux-armv7l/wheel/Bio/PopGen/SimCoal/data 2023-09-08T11:03:34,316 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/Cache.py -> build/bdist.linux-armv7l/wheel/Bio/PopGen/SimCoal 2023-09-08T11:03:34,318 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/Controller.py -> build/bdist.linux-armv7l/wheel/Bio/PopGen/SimCoal 2023-09-08T11:03:34,320 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/SimCoal/Async.py -> build/bdist.linux-armv7l/wheel/Bio/PopGen/SimCoal 2023-09-08T11:03:34,323 creating build/bdist.linux-armv7l/wheel/Bio/PopGen/FDist 2023-09-08T11:03:34,323 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/FDist/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/PopGen/FDist 2023-09-08T11:03:34,325 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/FDist/Utils.py -> build/bdist.linux-armv7l/wheel/Bio/PopGen/FDist 2023-09-08T11:03:34,327 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/FDist/Controller.py -> build/bdist.linux-armv7l/wheel/Bio/PopGen/FDist 2023-09-08T11:03:34,329 copying build/lib.linux-armv7l-cpython-311/Bio/PopGen/FDist/Async.py -> build/bdist.linux-armv7l/wheel/Bio/PopGen/FDist 2023-09-08T11:03:34,332 creating build/bdist.linux-armv7l/wheel/Bio/motifs 2023-09-08T11:03:34,333 copying build/lib.linux-armv7l-cpython-311/Bio/motifs/alignace.py -> build/bdist.linux-armv7l/wheel/Bio/motifs 2023-09-08T11:03:34,335 copying build/lib.linux-armv7l-cpython-311/Bio/motifs/mast.py -> build/bdist.linux-armv7l/wheel/Bio/motifs 2023-09-08T11:03:34,338 creating build/bdist.linux-armv7l/wheel/Bio/motifs/applications 2023-09-08T11:03:34,339 copying build/lib.linux-armv7l-cpython-311/Bio/motifs/applications/_alignace.py -> build/bdist.linux-armv7l/wheel/Bio/motifs/applications 2023-09-08T11:03:34,341 copying build/lib.linux-armv7l-cpython-311/Bio/motifs/applications/_xxmotif.py -> build/bdist.linux-armv7l/wheel/Bio/motifs/applications 2023-09-08T11:03:34,344 copying build/lib.linux-armv7l-cpython-311/Bio/motifs/applications/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/motifs/applications 2023-09-08T11:03:34,345 copying build/lib.linux-armv7l-cpython-311/Bio/motifs/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/motifs 2023-09-08T11:03:34,348 copying build/lib.linux-armv7l-cpython-311/Bio/motifs/transfac.py -> build/bdist.linux-armv7l/wheel/Bio/motifs 2023-09-08T11:03:34,350 copying build/lib.linux-armv7l-cpython-311/Bio/motifs/meme.py -> build/bdist.linux-armv7l/wheel/Bio/motifs 2023-09-08T11:03:34,352 copying build/lib.linux-armv7l-cpython-311/Bio/motifs/_pwm.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/Bio/motifs 2023-09-08T11:03:34,355 copying build/lib.linux-armv7l-cpython-311/Bio/motifs/thresholds.py -> build/bdist.linux-armv7l/wheel/Bio/motifs 2023-09-08T11:03:34,357 copying build/lib.linux-armv7l-cpython-311/Bio/motifs/matrix.py -> build/bdist.linux-armv7l/wheel/Bio/motifs 2023-09-08T11:03:34,360 copying build/lib.linux-armv7l-cpython-311/Bio/motifs/jaspar.py -> build/bdist.linux-armv7l/wheel/Bio/motifs 2023-09-08T11:03:34,361 copying build/lib.linux-armv7l-cpython-311/Bio/bgzf.py -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:34,365 creating build/bdist.linux-armv7l/wheel/Bio/HMM 2023-09-08T11:03:34,366 copying build/lib.linux-armv7l-cpython-311/Bio/HMM/MarkovModel.py -> build/bdist.linux-armv7l/wheel/Bio/HMM 2023-09-08T11:03:34,368 copying build/lib.linux-armv7l-cpython-311/Bio/HMM/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/HMM 2023-09-08T11:03:34,370 copying build/lib.linux-armv7l-cpython-311/Bio/HMM/DynamicProgramming.py -> build/bdist.linux-armv7l/wheel/Bio/HMM 2023-09-08T11:03:34,372 copying build/lib.linux-armv7l-cpython-311/Bio/HMM/Utilities.py -> build/bdist.linux-armv7l/wheel/Bio/HMM 2023-09-08T11:03:34,374 copying build/lib.linux-armv7l-cpython-311/Bio/HMM/Trainer.py -> build/bdist.linux-armv7l/wheel/Bio/HMM 2023-09-08T11:03:34,377 creating build/bdist.linux-armv7l/wheel/Bio/Cluster 2023-09-08T11:03:34,378 copying build/lib.linux-armv7l-cpython-311/Bio/Cluster/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Cluster 2023-09-08T11:03:34,381 copying build/lib.linux-armv7l-cpython-311/Bio/Cluster/cluster.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/Bio/Cluster 2023-09-08T11:03:34,388 creating build/bdist.linux-armv7l/wheel/Bio/Alphabet 2023-09-08T11:03:34,388 copying build/lib.linux-armv7l-cpython-311/Bio/Alphabet/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Alphabet 2023-09-08T11:03:34,391 copying build/lib.linux-armv7l-cpython-311/Bio/Alphabet/IUPAC.py -> build/bdist.linux-armv7l/wheel/Bio/Alphabet 2023-09-08T11:03:34,393 copying build/lib.linux-armv7l-cpython-311/Bio/Alphabet/Reduced.py -> build/bdist.linux-armv7l/wheel/Bio/Alphabet 2023-09-08T11:03:34,396 creating build/bdist.linux-armv7l/wheel/Bio/SubsMat 2023-09-08T11:03:34,397 copying build/lib.linux-armv7l-cpython-311/Bio/SubsMat/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/SubsMat 2023-09-08T11:03:34,407 copying build/lib.linux-armv7l-cpython-311/Bio/SubsMat/MatrixInfo.py -> build/bdist.linux-armv7l/wheel/Bio/SubsMat 2023-09-08T11:03:34,412 copying build/lib.linux-armv7l-cpython-311/Bio/SubsMat/FreqTable.py -> build/bdist.linux-armv7l/wheel/Bio/SubsMat 2023-09-08T11:03:34,414 copying build/lib.linux-armv7l-cpython-311/Bio/DocSQL.py -> build/bdist.linux-armv7l/wheel/Bio 2023-09-08T11:03:34,417 creating build/bdist.linux-armv7l/wheel/Bio/Motif 2023-09-08T11:03:34,418 copying build/lib.linux-armv7l-cpython-311/Bio/Motif/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Motif 2023-09-08T11:03:34,421 copying build/lib.linux-armv7l-cpython-311/Bio/Motif/_pwm.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/Bio/Motif 2023-09-08T11:03:34,425 creating build/bdist.linux-armv7l/wheel/Bio/Motif/Parsers 2023-09-08T11:03:34,426 copying build/lib.linux-armv7l-cpython-311/Bio/Motif/Parsers/MEME.py -> build/bdist.linux-armv7l/wheel/Bio/Motif/Parsers 2023-09-08T11:03:34,429 copying build/lib.linux-armv7l-cpython-311/Bio/Motif/Parsers/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Motif/Parsers 2023-09-08T11:03:34,431 copying build/lib.linux-armv7l-cpython-311/Bio/Motif/Parsers/MAST.py -> build/bdist.linux-armv7l/wheel/Bio/Motif/Parsers 2023-09-08T11:03:34,434 copying build/lib.linux-armv7l-cpython-311/Bio/Motif/Parsers/AlignAce.py -> build/bdist.linux-armv7l/wheel/Bio/Motif/Parsers 2023-09-08T11:03:34,436 copying build/lib.linux-armv7l-cpython-311/Bio/Motif/_Motif.py -> build/bdist.linux-armv7l/wheel/Bio/Motif 2023-09-08T11:03:34,439 copying build/lib.linux-armv7l-cpython-311/Bio/Motif/Thresholds.py -> build/bdist.linux-armv7l/wheel/Bio/Motif 2023-09-08T11:03:34,442 creating build/bdist.linux-armv7l/wheel/Bio/Motif/Applications 2023-09-08T11:03:34,443 copying build/lib.linux-armv7l-cpython-311/Bio/Motif/Applications/_AlignAce.py -> build/bdist.linux-armv7l/wheel/Bio/Motif/Applications 2023-09-08T11:03:34,446 copying build/lib.linux-armv7l-cpython-311/Bio/Motif/Applications/_XXmotif.py -> build/bdist.linux-armv7l/wheel/Bio/Motif/Applications 2023-09-08T11:03:34,448 copying build/lib.linux-armv7l-cpython-311/Bio/Motif/Applications/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Motif/Applications 2023-09-08T11:03:34,451 creating build/bdist.linux-armv7l/wheel/Bio/Medline 2023-09-08T11:03:34,452 copying build/lib.linux-armv7l-cpython-311/Bio/Medline/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/Medline 2023-09-08T11:03:34,455 creating build/bdist.linux-armv7l/wheel/Bio/KDTree 2023-09-08T11:03:34,456 copying build/lib.linux-armv7l-cpython-311/Bio/KDTree/_CKDTree.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/Bio/KDTree 2023-09-08T11:03:34,460 copying build/lib.linux-armv7l-cpython-311/Bio/KDTree/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/KDTree 2023-09-08T11:03:34,463 copying build/lib.linux-armv7l-cpython-311/Bio/KDTree/KDTree.py -> build/bdist.linux-armv7l/wheel/Bio/KDTree 2023-09-08T11:03:34,466 creating build/bdist.linux-armv7l/wheel/Bio/ExPASy 2023-09-08T11:03:34,467 copying build/lib.linux-armv7l-cpython-311/Bio/ExPASy/Prodoc.py -> build/bdist.linux-armv7l/wheel/Bio/ExPASy 2023-09-08T11:03:34,469 copying build/lib.linux-armv7l-cpython-311/Bio/ExPASy/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/ExPASy 2023-09-08T11:03:34,471 copying build/lib.linux-armv7l-cpython-311/Bio/ExPASy/ScanProsite.py -> build/bdist.linux-armv7l/wheel/Bio/ExPASy 2023-09-08T11:03:34,473 copying build/lib.linux-armv7l-cpython-311/Bio/ExPASy/Enzyme.py -> build/bdist.linux-armv7l/wheel/Bio/ExPASy 2023-09-08T11:03:34,475 copying build/lib.linux-armv7l-cpython-311/Bio/ExPASy/Prosite.py -> build/bdist.linux-armv7l/wheel/Bio/ExPASy 2023-09-08T11:03:34,478 creating build/bdist.linux-armv7l/wheel/Bio/KEGG 2023-09-08T11:03:34,479 copying build/lib.linux-armv7l-cpython-311/Bio/KEGG/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/KEGG 2023-09-08T11:03:34,482 creating build/bdist.linux-armv7l/wheel/Bio/KEGG/Map 2023-09-08T11:03:34,483 copying build/lib.linux-armv7l-cpython-311/Bio/KEGG/Map/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/KEGG/Map 2023-09-08T11:03:34,485 creating build/bdist.linux-armv7l/wheel/Bio/KEGG/Compound 2023-09-08T11:03:34,486 copying build/lib.linux-armv7l-cpython-311/Bio/KEGG/Compound/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/KEGG/Compound 2023-09-08T11:03:34,842 creating build/bdist.linux-armv7l/wheel/Bio/KEGG/Enzyme 2023-09-08T11:03:34,843 copying build/lib.linux-armv7l-cpython-311/Bio/KEGG/Enzyme/__init__.py -> build/bdist.linux-armv7l/wheel/Bio/KEGG/Enzyme 2023-09-08T11:03:34,847 running install_egg_info 2023-09-08T11:03:34,916 running egg_info 2023-09-08T11:03:34,917 creating biopython.egg-info 2023-09-08T11:03:34,939 writing biopython.egg-info/PKG-INFO 2023-09-08T11:03:34,941 writing dependency_links to biopython.egg-info/dependency_links.txt 2023-09-08T11:03:34,943 writing top-level names to biopython.egg-info/top_level.txt 2023-09-08T11:03:34,944 writing manifest file 'biopython.egg-info/SOURCES.txt' 2023-09-08T11:03:37,364 reading manifest file 'biopython.egg-info/SOURCES.txt' 2023-09-08T11:03:37,397 writing manifest file 'biopython.egg-info/SOURCES.txt' 2023-09-08T11:03:38,171 Copying biopython.egg-info to build/bdist.linux-armv7l/wheel/biopython-1.61-py3.11.egg-info 2023-09-08T11:03:39,194 running install_scripts 2023-09-08T11:03:39,290 creating build/bdist.linux-armv7l/wheel/biopython-1.61.dist-info/WHEEL 2023-09-08T11:03:39,292 creating '/tmp/pip-wheel-9frkqqjb/biopython-1.61-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-08T11:03:39,296 adding 'Bio/DocSQL.py' 2023-09-08T11:03:39,300 adding 'Bio/File.py' 2023-09-08T11:03:39,301 adding 'Bio/HotRand.py' 2023-09-08T11:03:39,303 adding 'Bio/Index.py' 2023-09-08T11:03:39,304 adding 'Bio/LogisticRegression.py' 2023-09-08T11:03:39,308 adding 'Bio/MarkovModel.py' 2023-09-08T11:03:39,310 adding 'Bio/MaxEntropy.py' 2023-09-08T11:03:39,312 adding 'Bio/NaiveBayes.py' 2023-09-08T11:03:39,315 adding 'Bio/ParserSupport.py' 2023-09-08T11:03:39,316 adding 'Bio/Search.py' 2023-09-08T11:03:39,325 adding 'Bio/Seq.py' 2023-09-08T11:03:39,330 adding 'Bio/SeqFeature.py' 2023-09-08T11:03:39,336 adding 'Bio/SeqRecord.py' 2023-09-08T11:03:39,337 adding 'Bio/__init__.py' 2023-09-08T11:03:39,340 adding 'Bio/_utils.py' 2023-09-08T11:03:39,344 adding 'Bio/bgzf.py' 2023-09-08T11:03:39,352 adding 'Bio/cpairwise2.cpython-311-arm-linux-gnueabihf.so' 2023-09-08T11:03:39,354 adding 'Bio/kNN.py' 2023-09-08T11:03:39,358 adding 'Bio/pairwise2.py' 2023-09-08T11:03:39,359 adding 'Bio/triefind.py' 2023-09-08T11:03:39,361 adding 'Bio/Affy/CelFile.py' 2023-09-08T11:03:39,363 adding 'Bio/Affy/__init__.py' 2023-09-08T11:03:39,367 adding 'Bio/Align/AlignInfo.py' 2023-09-08T11:03:39,369 adding 'Bio/Align/Generic.py' 2023-09-08T11:03:39,372 adding 'Bio/Align/__init__.py' 2023-09-08T11:03:39,375 adding 'Bio/Align/Applications/_ClustalOmega.py' 2023-09-08T11:03:39,377 adding 'Bio/Align/Applications/_Clustalw.py' 2023-09-08T11:03:39,379 adding 'Bio/Align/Applications/_Dialign.py' 2023-09-08T11:03:39,381 adding 'Bio/Align/Applications/_Mafft.py' 2023-09-08T11:03:39,384 adding 'Bio/Align/Applications/_Muscle.py' 2023-09-08T11:03:39,386 adding 'Bio/Align/Applications/_Prank.py' 2023-09-08T11:03:39,387 adding 'Bio/Align/Applications/_Probcons.py' 2023-09-08T11:03:39,389 adding 'Bio/Align/Applications/_TCoffee.py' 2023-09-08T11:03:39,390 adding 'Bio/Align/Applications/__init__.py' 2023-09-08T11:03:39,394 adding 'Bio/AlignIO/ClustalIO.py' 2023-09-08T11:03:39,397 adding 'Bio/AlignIO/EmbossIO.py' 2023-09-08T11:03:39,399 adding 'Bio/AlignIO/FastaIO.py' 2023-09-08T11:03:39,401 adding 'Bio/AlignIO/Interfaces.py' 2023-09-08T11:03:39,403 adding 'Bio/AlignIO/NexusIO.py' 2023-09-08T11:03:39,406 adding 'Bio/AlignIO/PhylipIO.py' 2023-09-08T11:03:39,409 adding 'Bio/AlignIO/StockholmIO.py' 2023-09-08T11:03:39,412 adding 'Bio/AlignIO/__init__.py' 2023-09-08T11:03:39,414 adding 'Bio/Alphabet/IUPAC.py' 2023-09-08T11:03:39,415 adding 'Bio/Alphabet/Reduced.py' 2023-09-08T11:03:39,417 adding 'Bio/Alphabet/__init__.py' 2023-09-08T11:03:39,421 adding 'Bio/Application/__init__.py' 2023-09-08T11:03:39,429 adding 'Bio/Blast/Applications.py' 2023-09-08T11:03:39,439 adding 'Bio/Blast/NCBIStandalone.py' 2023-09-08T11:03:39,442 adding 'Bio/Blast/NCBIWWW.py' 2023-09-08T11:03:39,445 adding 'Bio/Blast/NCBIXML.py' 2023-09-08T11:03:39,447 adding 'Bio/Blast/ParseBlastTable.py' 2023-09-08T11:03:39,449 adding 'Bio/Blast/Record.py' 2023-09-08T11:03:39,450 adding 'Bio/Blast/__init__.py' 2023-09-08T11:03:39,452 adding 'Bio/CAPS/__init__.py' 2023-09-08T11:03:39,455 adding 'Bio/Cluster/__init__.py' 2023-09-08T11:03:39,517 adding 'Bio/Cluster/cluster.cpython-311-arm-linux-gnueabihf.so' 2023-09-08T11:03:39,522 adding 'Bio/Compass/__init__.py' 2023-09-08T11:03:39,524 adding 'Bio/Crystal/__init__.py' 2023-09-08T11:03:39,528 adding 'Bio/Data/CodonTable.py' 2023-09-08T11:03:39,531 adding 'Bio/Data/IUPACData.py' 2023-09-08T11:03:39,532 adding 'Bio/Data/__init__.py' 2023-09-08T11:03:39,538 adding 'Bio/Emboss/Applications.py' 2023-09-08T11:03:39,539 adding 'Bio/Emboss/Primer3.py' 2023-09-08T11:03:39,541 adding 'Bio/Emboss/PrimerSearch.py' 2023-09-08T11:03:39,542 adding 'Bio/Emboss/__init__.py' 2023-09-08T11:03:39,546 adding 'Bio/Entrez/Parser.py' 2023-09-08T11:03:39,548 adding 'Bio/Entrez/__init__.py' 2023-09-08T11:03:39,554 adding 'Bio/Entrez/DTDs/EMBL_General.mod.dtd' 2023-09-08T11:03:39,555 adding 'Bio/Entrez/DTDs/GenBank_General.mod.dtd' 2023-09-08T11:03:39,556 adding 'Bio/Entrez/DTDs/HomoloGene.dtd' 2023-09-08T11:03:39,558 adding 'Bio/Entrez/DTDs/HomoloGene.mod.dtd' 2023-09-08T11:03:39,560 adding 'Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd' 2023-09-08T11:03:39,562 adding 'Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd' 2023-09-08T11:03:39,563 adding 'Bio/Entrez/DTDs/NCBI_BlastOutput.dtd' 2023-09-08T11:03:39,564 adding 'Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd' 2023-09-08T11:03:39,565 adding 'Bio/Entrez/DTDs/NCBI_Entity.mod.dtd' 2023-09-08T11:03:39,567 adding 'Bio/Entrez/DTDs/NCBI_Entrezgene.dtd' 2023-09-08T11:03:39,568 adding 'Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd' 2023-09-08T11:03:39,570 adding 'Bio/Entrez/DTDs/NCBI_GBSeq.dtd' 2023-09-08T11:03:39,572 adding 'Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd' 2023-09-08T11:03:39,573 adding 'Bio/Entrez/DTDs/NCBI_Gene.mod.dtd' 2023-09-08T11:03:39,575 adding 'Bio/Entrez/DTDs/NCBI_General.mod.dtd' 2023-09-08T11:03:39,577 adding 'Bio/Entrez/DTDs/NCBI_Medline.mod.dtd' 2023-09-08T11:03:39,578 adding 'Bio/Entrez/DTDs/NCBI_Mim.dtd' 2023-09-08T11:03:39,580 adding 'Bio/Entrez/DTDs/NCBI_Mim.mod.dtd' 2023-09-08T11:03:39,581 adding 'Bio/Entrez/DTDs/NCBI_Organism.mod.dtd' 2023-09-08T11:03:39,583 adding 'Bio/Entrez/DTDs/NCBI_Protein.mod.dtd' 2023-09-08T11:03:39,584 adding 'Bio/Entrez/DTDs/NCBI_Pub.mod.dtd' 2023-09-08T11:03:39,586 adding 'Bio/Entrez/DTDs/NCBI_RNA.mod.dtd' 2023-09-08T11:03:39,587 adding 'Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd' 2023-09-08T11:03:39,588 adding 'Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd' 2023-09-08T11:03:39,591 adding 'Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd' 2023-09-08T11:03:39,593 adding 'Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd' 2023-09-08T11:03:39,595 adding 'Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd' 2023-09-08T11:03:39,596 adding 'Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd' 2023-09-08T11:03:39,597 adding 'Bio/Entrez/DTDs/NCBI_Seqset.dtd' 2023-09-08T11:03:39,599 adding 'Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd' 2023-09-08T11:03:39,602 adding 'Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd' 2023-09-08T11:03:39,603 adding 'Bio/Entrez/DTDs/NCBI_TSeq.dtd' 2023-09-08T11:03:39,605 adding 'Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd' 2023-09-08T11:03:39,606 adding 'Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd' 2023-09-08T11:03:39,607 adding 'Bio/Entrez/DTDs/PDB_General.mod.dtd' 2023-09-08T11:03:39,609 adding 'Bio/Entrez/DTDs/PIR_General.mod.dtd' 2023-09-08T11:03:39,610 adding 'Bio/Entrez/DTDs/PRF_General.mod.dtd' 2023-09-08T11:03:39,611 adding 'Bio/Entrez/DTDs/SP_General.mod.dtd' 2023-09-08T11:03:39,613 adding 'Bio/Entrez/DTDs/XHTMLtablesetup.ent' 2023-09-08T11:03:39,618 adding 'Bio/Entrez/DTDs/archivearticle.dtd' 2023-09-08T11:03:39,620 adding 'Bio/Entrez/DTDs/archivecustom-classes.ent' 2023-09-08T11:03:39,623 adding 'Bio/Entrez/DTDs/archivecustom-mixes.ent' 2023-09-08T11:03:39,626 adding 'Bio/Entrez/DTDs/archivecustom-models.ent' 2023-09-08T11:03:39,628 adding 'Bio/Entrez/DTDs/archivecustom-modules.ent' 2023-09-08T11:03:39,637 adding 'Bio/Entrez/DTDs/articlemeta.ent' 2023-09-08T11:03:39,639 adding 'Bio/Entrez/DTDs/backmatter.ent' 2023-09-08T11:03:39,641 adding 'Bio/Entrez/DTDs/bookdoc_100301.dtd' 2023-09-08T11:03:39,642 adding 'Bio/Entrez/DTDs/bookdoc_110101.dtd' 2023-09-08T11:03:39,644 adding 'Bio/Entrez/DTDs/bookdoc_120101.dtd' 2023-09-08T11:03:39,647 adding 'Bio/Entrez/DTDs/chars.ent' 2023-09-08T11:03:39,660 adding 'Bio/Entrez/DTDs/common.ent' 2023-09-08T11:03:39,665 adding 'Bio/Entrez/DTDs/default-classes.ent' 2023-09-08T11:03:39,692 adding 'Bio/Entrez/DTDs/default-mixes.ent' 2023-09-08T11:03:40,235 adding 'Bio/Entrez/DTDs/display.ent' 2023-09-08T11:03:41,013 adding 'Bio/Entrez/DTDs/eInfo_020511.dtd' 2023-09-08T11:03:41,017 adding 'Bio/Entrez/DTDs/eLink_020511.dtd' 2023-09-08T11:03:41,464 adding 'Bio/Entrez/DTDs/eLink_090910.dtd' 2023-09-08T11:03:41,468 adding 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2023-09-08T11:03:43,898 adding 'Bio/PDB/Residue.py' 2023-09-08T11:03:43,900 adding 'Bio/PDB/ResidueDepth.py' 2023-09-08T11:03:43,901 adding 'Bio/PDB/Selection.py' 2023-09-08T11:03:43,903 adding 'Bio/PDB/Structure.py' 2023-09-08T11:03:43,904 adding 'Bio/PDB/StructureAlignment.py' 2023-09-08T11:03:43,906 adding 'Bio/PDB/StructureBuilder.py' 2023-09-08T11:03:43,908 adding 'Bio/PDB/Superimposer.py' 2023-09-08T11:03:43,909 adding 'Bio/PDB/Vector.py' 2023-09-08T11:03:43,911 adding 'Bio/PDB/__init__.py' 2023-09-08T11:03:43,913 adding 'Bio/PDB/parse_pdb_header.py' 2023-09-08T11:03:43,914 adding 'Bio/PDB/mmCIF/__init__.py' 2023-09-08T11:03:43,917 adding 'Bio/Pathway/__init__.py' 2023-09-08T11:03:43,919 adding 'Bio/Pathway/Rep/Graph.py' 2023-09-08T11:03:43,920 adding 'Bio/Pathway/Rep/HashSet.py' 2023-09-08T11:03:43,922 adding 'Bio/Pathway/Rep/MultiGraph.py' 2023-09-08T11:03:43,923 adding 'Bio/Pathway/Rep/__init__.py' 2023-09-08T11:03:43,930 adding 'Bio/Phylo/BaseTree.py' 2023-09-08T11:03:43,931 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adding 'Bio/SeqIO/InsdcIO.py' 2023-09-08T11:03:44,163 adding 'Bio/SeqIO/Interfaces.py' 2023-09-08T11:03:44,165 adding 'Bio/SeqIO/PdbIO.py' 2023-09-08T11:03:44,166 adding 'Bio/SeqIO/PhdIO.py' 2023-09-08T11:03:44,168 adding 'Bio/SeqIO/PirIO.py' 2023-09-08T11:03:44,176 adding 'Bio/SeqIO/QualityIO.py' 2023-09-08T11:03:44,180 adding 'Bio/SeqIO/SeqXmlIO.py' 2023-09-08T11:03:44,189 adding 'Bio/SeqIO/SffIO.py' 2023-09-08T11:03:44,192 adding 'Bio/SeqIO/SwissIO.py' 2023-09-08T11:03:44,194 adding 'Bio/SeqIO/TabIO.py' 2023-09-08T11:03:44,197 adding 'Bio/SeqIO/UniprotIO.py' 2023-09-08T11:03:44,205 adding 'Bio/SeqIO/__init__.py' 2023-09-08T11:03:44,207 adding 'Bio/SeqIO/_convert.py' 2023-09-08T11:03:44,211 adding 'Bio/SeqIO/_index.py' 2023-09-08T11:03:44,214 adding 'Bio/SeqUtils/CheckSum.py' 2023-09-08T11:03:44,216 adding 'Bio/SeqUtils/CodonUsage.py' 2023-09-08T11:03:44,218 adding 'Bio/SeqUtils/CodonUsageIndices.py' 2023-09-08T11:03:44,220 adding 'Bio/SeqUtils/IsoelectricPoint.py' 2023-09-08T11:03:44,222 adding 'Bio/SeqUtils/MeltingTemp.py' 2023-09-08T11:03:44,225 adding 'Bio/SeqUtils/ProtParam.py' 2023-09-08T11:03:44,228 adding 'Bio/SeqUtils/ProtParamData.py' 2023-09-08T11:03:44,231 adding 'Bio/SeqUtils/__init__.py' 2023-09-08T11:03:44,233 adding 'Bio/SeqUtils/lcc.py' 2023-09-08T11:03:44,237 adding 'Bio/Sequencing/Ace.py' 2023-09-08T11:03:44,240 adding 'Bio/Sequencing/Phd.py' 2023-09-08T11:03:44,241 adding 'Bio/Sequencing/__init__.py' 2023-09-08T11:03:44,244 adding 'Bio/Sequencing/Applications/_Novoalign.py' 2023-09-08T11:03:44,245 adding 'Bio/Sequencing/Applications/__init__.py' 2023-09-08T11:03:44,247 adding 'Bio/Statistics/__init__.py' 2023-09-08T11:03:44,249 adding 'Bio/Statistics/lowess.py' 2023-09-08T11:03:44,251 adding 'Bio/SubsMat/FreqTable.py' 2023-09-08T11:03:44,285 adding 'Bio/SubsMat/MatrixInfo.py' 2023-09-08T11:03:44,290 adding 'Bio/SubsMat/__init__.py' 2023-09-08T11:03:44,292 adding 'Bio/SwissProt/KeyWList.py' 2023-09-08T11:03:44,294 adding 'Bio/SwissProt/__init__.py' 2023-09-08T11:03:44,297 adding 'Bio/TogoWS/__init__.py' 2023-09-08T11:03:44,299 adding 'Bio/UniGene/UniGene.py' 2023-09-08T11:03:44,301 adding 'Bio/UniGene/__init__.py' 2023-09-08T11:03:44,303 adding 'Bio/Wise/__init__.py' 2023-09-08T11:03:44,305 adding 'Bio/Wise/dnal.py' 2023-09-08T11:03:44,306 adding 'Bio/Wise/psw.py' 2023-09-08T11:03:44,308 adding 'Bio/_py3k/__init__.py' 2023-09-08T11:03:44,310 adding 'Bio/_py3k/_ordereddict.py' 2023-09-08T11:03:44,313 adding 'Bio/motifs/__init__.py' 2023-09-08T11:03:44,318 adding 'Bio/motifs/_pwm.cpython-311-arm-linux-gnueabihf.so' 2023-09-08T11:03:44,319 adding 'Bio/motifs/alignace.py' 2023-09-08T11:03:44,320 adding 'Bio/motifs/jaspar.py' 2023-09-08T11:03:44,322 adding 'Bio/motifs/mast.py' 2023-09-08T11:03:44,324 adding 'Bio/motifs/matrix.py' 2023-09-08T11:03:44,326 adding 'Bio/motifs/meme.py' 2023-09-08T11:03:44,327 adding 'Bio/motifs/thresholds.py' 2023-09-08T11:03:44,329 adding 'Bio/motifs/transfac.py' 2023-09-08T11:03:44,331 adding 'Bio/motifs/applications/__init__.py' 2023-09-08T11:03:44,333 adding 'Bio/motifs/applications/_alignace.py' 2023-09-08T11:03:44,334 adding 'Bio/motifs/applications/_xxmotif.py' 2023-09-08T11:03:44,338 adding 'BioSQL/BioSeq.py' 2023-09-08T11:03:44,341 adding 'BioSQL/BioSeqDatabase.py' 2023-09-08T11:03:44,342 adding 'BioSQL/DBUtils.py' 2023-09-08T11:03:44,348 adding 'BioSQL/Loader.py' 2023-09-08T11:03:44,349 adding 'BioSQL/__init__.py' 2023-09-08T11:03:44,351 adding 'biopython-1.61.dist-info/METADATA' 2023-09-08T11:03:44,352 adding 'biopython-1.61.dist-info/WHEEL' 2023-09-08T11:03:44,353 adding 'biopython-1.61.dist-info/top_level.txt' 2023-09-08T11:03:44,361 adding 'biopython-1.61.dist-info/RECORD' 2023-09-08T11:03:44,385 removing build/bdist.linux-armv7l/wheel 2023-09-08T11:03:44,668 Building wheel for biopython (setup.py): finished with status 'done' 2023-09-08T11:03:44,692 Created wheel for biopython: filename=biopython-1.61-cp311-cp311-linux_armv7l.whl size=1778721 sha256=85e0c68936fcce9a81a42e9243cd9c16d7788b1e9dd95eb0367cc76a5f10b477 2023-09-08T11:03:44,693 Stored in directory: /tmp/pip-ephem-wheel-cache-8yb06g_a/wheels/4d/35/0b/22836b6bc001c39b754a3af6321f98043a1b5cf62c0abcba27 2023-09-08T11:03:44,716 Successfully built biopython 2023-09-08T11:03:44,778 Removed build tracker: '/tmp/pip-build-tracker-8s39kgpu'