2023-09-08T11:53:08,862 Created temporary directory: /tmp/pip-build-tracker-zdmn4y28
2023-09-08T11:53:08,863 Initialized build tracking at /tmp/pip-build-tracker-zdmn4y28
2023-09-08T11:53:08,864 Created build tracker: /tmp/pip-build-tracker-zdmn4y28
2023-09-08T11:53:08,864 Entered build tracker: /tmp/pip-build-tracker-zdmn4y28
2023-09-08T11:53:08,865 Created temporary directory: /tmp/pip-wheel-9ftxtjdc
2023-09-08T11:53:08,868 Created temporary directory: /tmp/pip-ephem-wheel-cache-b6hqy7g9
2023-09-08T11:53:08,891 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-08T11:53:08,895 2 location(s) to search for versions of ngs-plumbing:
2023-09-08T11:53:08,895 * https://pypi.org/simple/ngs-plumbing/
2023-09-08T11:53:08,895 * https://www.piwheels.org/simple/ngs-plumbing/
2023-09-08T11:53:08,896 Fetching project page and analyzing links: https://pypi.org/simple/ngs-plumbing/
2023-09-08T11:53:08,897 Getting page https://pypi.org/simple/ngs-plumbing/
2023-09-08T11:53:08,898 Found index url https://pypi.org/simple/
2023-09-08T11:53:09,041 Fetched page https://pypi.org/simple/ngs-plumbing/ as application/vnd.pypi.simple.v1+json
2023-09-08T11:53:09,047   Found link https://files.pythonhosted.org/packages/e2/b7/896169889e1a705a2db7fc237a9e6f4b6c39b9dd94d8671667cc3bc652d7/ngs_plumbing-0.5.1.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.5.1
2023-09-08T11:53:09,047   Found link https://files.pythonhosted.org/packages/17/3d/83ed952f2731054d91fcd64c58748c339c597d552ffec03922be97101240/ngs_plumbing-0.6.1.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.6.1
2023-09-08T11:53:09,048   Found link https://files.pythonhosted.org/packages/ac/f5/0d958a7591e7dfc436298e2d5902cca67e2d45634fa0d699153b1098195d/ngs_plumbing-0.6.2.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.6.2
2023-09-08T11:53:09,049   Found link https://files.pythonhosted.org/packages/a1/3e/24003dd7ed3790f9f9f89535a0ceea78c5f4d462986bf21fb30cd354bd58/ngs_plumbing-0.6.3.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.6.3
2023-09-08T11:53:09,049   Found link https://files.pythonhosted.org/packages/2e/52/d94a726f19fe9269ff371b20255c4de31de8c5c02cf59532813f4a18397a/ngs_plumbing-0.7.0.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.7.0
2023-09-08T11:53:09,050   Found link https://files.pythonhosted.org/packages/d1/ed/c91ca8009f59baffc67130f5bf50b570da150e3948598a9701448be0a2cd/ngs_plumbing-0.7.1.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.7.1
2023-09-08T11:53:09,050   Found link https://files.pythonhosted.org/packages/30/66/55853e0ec4f30f1828c1cce74f4b122847854f4aa089bacc2dc60bdaaa0f/ngs_plumbing-0.7.2.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.7.2
2023-09-08T11:53:09,051   Found link https://files.pythonhosted.org/packages/21/29/e2b6f24977d0d3f0d20643187bc9b46c51b6ac59cedd01f62f00bf3f1e5d/ngs_plumbing-0.7.3.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.7.3
2023-09-08T11:53:09,052   Found link https://files.pythonhosted.org/packages/70/39/24252c9bc4dc000d52145a2d4e791fe8b2565a4f462020465554733ba4b7/ngs_plumbing-0.7.4.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.7.4
2023-09-08T11:53:09,052   Found link https://files.pythonhosted.org/packages/b4/00/605467be81bb6cae9f9ae5a5228946e6215c2446ad9e131bb7737bffb7a1/ngs_plumbing-0.7.5.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.7.5
2023-09-08T11:53:09,053   Found link https://files.pythonhosted.org/packages/e8/5a/79b30734c953d9b024b52cb6ff7009fea49b775ac143e93bb7b0e52b15d9/ngs_plumbing-0.8.0.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.8.0
2023-09-08T11:53:09,054   Found link https://files.pythonhosted.org/packages/aa/2f/ea679e884acfd3cf0766ef7e150dcb26e8e2f5bba415c0b7317a8e514377/ngs_plumbing-0.8.1.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.8.1
2023-09-08T11:53:09,054   Found link https://files.pythonhosted.org/packages/49/b4/c14b0f4bb8d2e2c475093d83d9b2a52743953d99aa3b91290ac0422d8dff/ngs_plumbing-0.8.2.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.8.2
2023-09-08T11:53:09,055   Found link https://files.pythonhosted.org/packages/89/1d/5ff21faba6fb2ec2775eab5a7555163a3c4865705ba4d05e8507a1ce4398/ngs_plumbing-0.9.0.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.9.0
2023-09-08T11:53:09,056   Found link https://files.pythonhosted.org/packages/9b/49/7ff35e46900140f2d5b696e7240d19ac90913a4d7c3c9b0d4bab5e707d84/ngs_plumbing-0.10.0.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.10.0
2023-09-08T11:53:09,056   Found link https://files.pythonhosted.org/packages/ee/af/35e8bcebff8702993f25a6987a414dda927929c9fe39fc92af1ae2ca7668/ngs_plumbing-0.10.1.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.10.1
2023-09-08T11:53:09,057   Found link https://files.pythonhosted.org/packages/29/8e/5c1c762bc712b1d3897b92078955e71216e56d64416c76bac99e0db8880a/ngs_plumbing-0.10.2.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.10.2
2023-09-08T11:53:09,057   Found link https://files.pythonhosted.org/packages/9e/40/62af4356ba0ad2cc37d5adeafde4974a47f8df09fa5ca79a64c5ef7bffbb/ngs_plumbing-0.11.0.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.11.0
2023-09-08T11:53:09,058   Found link https://files.pythonhosted.org/packages/ff/c5/92ca8129b4f963f8dfb1812a34ba0ebd285d7b5daa81896a368b64a896a5/ngs_plumbing-0.11.1.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.11.1
2023-09-08T11:53:09,059   Found link https://files.pythonhosted.org/packages/86/e6/e72c4b834909bc9c0412aab091fc05b0a091b9c6861a3a0d4a9edbbce822/ngs_plumbing-0.12.0.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.12.0
2023-09-08T11:53:09,059   Found link https://files.pythonhosted.org/packages/03/8a/9db89c482934552967bf5fef88f83d894cd98708c66571d7f0762cbac990/ngs_plumbing-0.12.2.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.12.2
2023-09-08T11:53:09,060   Found link https://files.pythonhosted.org/packages/03/0d/4c2d5c9ad4517970df0e2f6c8827d3c10f324883326a63c7e589042dbd17/ngs_plumbing-0.12.3.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.12.3
2023-09-08T11:53:09,060   Found link https://files.pythonhosted.org/packages/cf/95/92f0ce68a236e33d3b4be730d315d60c17fa1968d6b64a80c27001419363/ngs_plumbing-0.12.4.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.12.4
2023-09-08T11:53:09,061   Found link https://files.pythonhosted.org/packages/e8/69/8a0fba8c6a02c3e7a4cff43b6aa07e2942beae6eaeda732a05560dad0b8a/ngs_plumbing-0.13.0.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.13.0
2023-09-08T11:53:09,061   Found link https://files.pythonhosted.org/packages/e7/43/38c5059e87bbfc0ab7e3656de6144da6ae5df0832b2accf49f80a63abb22/ngs_plumbing-0.13.1.tar.gz (from https://pypi.org/simple/ngs-plumbing/), version: 0.13.1
2023-09-08T11:53:09,062 Fetching project page and analyzing links: https://www.piwheels.org/simple/ngs-plumbing/
2023-09-08T11:53:09,063 Getting page https://www.piwheels.org/simple/ngs-plumbing/
2023-09-08T11:53:09,064 Found index url https://www.piwheels.org/simple/
2023-09-08T11:53:09,601 Fetched page https://www.piwheels.org/simple/ngs-plumbing/ as text/html
2023-09-08T11:53:09,618   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.13.1-cp39-cp39-linux_armv7l.whl#sha256=e84e01c6ddece267d014d3bb98cfe473f0c04288da44fc037a163a28811a0ab2 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,619   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.13.1-cp39-cp39-linux_armv6l.whl#sha256=e84e01c6ddece267d014d3bb98cfe473f0c04288da44fc037a163a28811a0ab2 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,619   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.13.1-cp34-cp34m-linux_armv6l.whl#sha256=b3ca9c159349828d3a3d37dafce0c7dc63f24d2a4b37c215ddc7d7438cf779ec (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,620   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.13.1-cp34-cp34m-linux_armv7l.whl#sha256=b3ca9c159349828d3a3d37dafce0c7dc63f24d2a4b37c215ddc7d7438cf779ec (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,621   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.13.1-cp35-cp35m-linux_armv7l.whl#sha256=dda744a6d0c7dc31a0a569520b60d03a11c7ecf7b068a90ca8e4b21e66951371 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,621   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.13.1-cp35-cp35m-linux_armv6l.whl#sha256=dda744a6d0c7dc31a0a569520b60d03a11c7ecf7b068a90ca8e4b21e66951371 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,622   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.13.1-cp37-cp37m-linux_armv6l.whl#sha256=1fb108c8f4ea8011e99ee5d01f38a49a633726e2d8116eef6d99f0db932d9ff7 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,622   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.13.1-cp37-cp37m-linux_armv7l.whl#sha256=1fb108c8f4ea8011e99ee5d01f38a49a633726e2d8116eef6d99f0db932d9ff7 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,623   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.13.0-cp39-cp39-linux_armv7l.whl#sha256=ee4d1df5fd857bfaf61f191840fafa78c8ceeec4c7065f31d34736cf1cd5428e (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,623   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.13.0-cp39-cp39-linux_armv6l.whl#sha256=ee4d1df5fd857bfaf61f191840fafa78c8ceeec4c7065f31d34736cf1cd5428e (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,624   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.13.0-cp34-cp34m-linux_armv6l.whl#sha256=c32a1641dc947f29876b0737d417f4ab09c4c009b80abb14707833d9e3571f32 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,624   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.13.0-cp34-cp34m-linux_armv7l.whl#sha256=c32a1641dc947f29876b0737d417f4ab09c4c009b80abb14707833d9e3571f32 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,625   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.13.0-cp35-cp35m-linux_armv7l.whl#sha256=24d584f33d1586a359430711dc8b59dd1341c67beab065131017fe8d2b8aaddf (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,625   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.13.0-cp35-cp35m-linux_armv6l.whl#sha256=24d584f33d1586a359430711dc8b59dd1341c67beab065131017fe8d2b8aaddf (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,626   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.13.0-cp37-cp37m-linux_armv6l.whl#sha256=5c372ddbc7569a9be0689d05e0bcc85f5a52d48dfcf5334a44e141f909ed26ac (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,626   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.13.0-cp37-cp37m-linux_armv7l.whl#sha256=5c372ddbc7569a9be0689d05e0bcc85f5a52d48dfcf5334a44e141f909ed26ac (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,627   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.4-cp39-cp39-linux_armv7l.whl#sha256=8634420d0c9e212daa764c8f424749ae41978fe58b2bdf3e1cdabd101505bafd (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,628   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.4-cp39-cp39-linux_armv6l.whl#sha256=8634420d0c9e212daa764c8f424749ae41978fe58b2bdf3e1cdabd101505bafd (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,628   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.4-cp34-cp34m-linux_armv6l.whl#sha256=d6fd34014b34a01c8b31d6a01717776fc70c607e138f656d0e44291fde703a47 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,629   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.4-cp34-cp34m-linux_armv7l.whl#sha256=d6fd34014b34a01c8b31d6a01717776fc70c607e138f656d0e44291fde703a47 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,629   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.4-cp35-cp35m-linux_armv7l.whl#sha256=03045667cc3646cc2d1157bd995632e9e8e478a032233c8c3b51124d57f0b908 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,630   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.4-cp35-cp35m-linux_armv6l.whl#sha256=03045667cc3646cc2d1157bd995632e9e8e478a032233c8c3b51124d57f0b908 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,630   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.4-cp37-cp37m-linux_armv7l.whl#sha256=6bc87413889ec05cc47cd8d548f487273ca32e68157b777beaa8f54de0e13176 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,631   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.4-cp37-cp37m-linux_armv6l.whl#sha256=6bc87413889ec05cc47cd8d548f487273ca32e68157b777beaa8f54de0e13176 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,631   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.3-cp39-cp39-linux_armv7l.whl#sha256=2cf1330cfcf96b713b3c6ee1bf1c08eed14ba3b00b9a64225d4ed2262c7ffa94 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,632   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.3-cp39-cp39-linux_armv6l.whl#sha256=2cf1330cfcf96b713b3c6ee1bf1c08eed14ba3b00b9a64225d4ed2262c7ffa94 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,632   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.3-cp35-cp35m-linux_armv6l.whl#sha256=95f6544f7badb25ea332ba097995c549b2d15bb00879ce1e2bc669a47e268289 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,633   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.3-cp35-cp35m-linux_armv7l.whl#sha256=95f6544f7badb25ea332ba097995c549b2d15bb00879ce1e2bc669a47e268289 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,633   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.3-cp34-cp34m-linux_armv6l.whl#sha256=4f3a45f51eab3ea42bcd4de0cafacee05fa081c1f97a654b12896aaef0bc7498 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,634   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.3-cp34-cp34m-linux_armv7l.whl#sha256=4f3a45f51eab3ea42bcd4de0cafacee05fa081c1f97a654b12896aaef0bc7498 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,635   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.3-cp37-cp37m-linux_armv6l.whl#sha256=af9653b6afa851ee6299ecd42707a30e801eed33e6b77997a07fff47a4d2ca71 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,635   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.3-cp37-cp37m-linux_armv7l.whl#sha256=af9653b6afa851ee6299ecd42707a30e801eed33e6b77997a07fff47a4d2ca71 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,636   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.2-cp39-cp39-linux_armv7l.whl#sha256=80063979a82778aa29beeb1ca9067375ad17d7db60454d1f9ca68d2d7931b7d4 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,636   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.2-cp39-cp39-linux_armv6l.whl#sha256=80063979a82778aa29beeb1ca9067375ad17d7db60454d1f9ca68d2d7931b7d4 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,637   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.2-cp35-cp35m-linux_armv7l.whl#sha256=3138ee58300242a896789dcb0bcf028f800b32aba66cee5650bd0bd6bcdeba49 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,637   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.2-cp35-cp35m-linux_armv6l.whl#sha256=3138ee58300242a896789dcb0bcf028f800b32aba66cee5650bd0bd6bcdeba49 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,638   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.2-cp34-cp34m-linux_armv6l.whl#sha256=c19c72e84e395ab51a9271987b4481624274e72035060d4d2c8097105c197e87 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,638   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.2-cp34-cp34m-linux_armv7l.whl#sha256=c19c72e84e395ab51a9271987b4481624274e72035060d4d2c8097105c197e87 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,639   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.2-cp37-cp37m-linux_armv6l.whl#sha256=95477c9f8174f0fd1fee8e0bbe4d06c88134b5065fe14db7f310719d114ac44f (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,639   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.12.2-cp37-cp37m-linux_armv7l.whl#sha256=95477c9f8174f0fd1fee8e0bbe4d06c88134b5065fe14db7f310719d114ac44f (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,640   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.11.1-cp311-cp311-linux_armv7l.whl#sha256=6149942e92ec7dfcd454c67fdaa389d93457e06e0fd7ddd2e96bc6d42251091d (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,640   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.11.1-cp311-cp311-linux_armv6l.whl#sha256=6149942e92ec7dfcd454c67fdaa389d93457e06e0fd7ddd2e96bc6d42251091d (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,641   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.11.1-cp39-cp39-linux_armv7l.whl#sha256=c2ef4ba0608d84b79d7b807c77d090c815dd025262826cd7adb1a87c71646127 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,641   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.11.1-cp39-cp39-linux_armv6l.whl#sha256=c2ef4ba0608d84b79d7b807c77d090c815dd025262826cd7adb1a87c71646127 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,642   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.11.1-cp37-cp37m-linux_armv7l.whl#sha256=59a31efe3f92b6e3284520027aadae8a52db036aa2ff85b77df7a125e57c014a (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,642   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.11.1-cp37-cp37m-linux_armv6l.whl#sha256=59a31efe3f92b6e3284520027aadae8a52db036aa2ff85b77df7a125e57c014a (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,643   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.11.1-cp35-cp35m-linux_armv6l.whl#sha256=003a0d7b9263a019f2a570436ec9cc80ec1ec49c3be27366df494aaccf90247e (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,643   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.11.1-cp35-cp35m-linux_armv7l.whl#sha256=003a0d7b9263a019f2a570436ec9cc80ec1ec49c3be27366df494aaccf90247e (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,644   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.11.0-cp311-cp311-linux_armv7l.whl#sha256=496d808191c6caaea61b098098037eee726721ebbede8f0748c51c188d112b83 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,644   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.11.0-cp311-cp311-linux_armv6l.whl#sha256=496d808191c6caaea61b098098037eee726721ebbede8f0748c51c188d112b83 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,645   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.11.0-cp39-cp39-linux_armv7l.whl#sha256=cf0f84e93c37e45f16710db8ab2155eac9521fcd6c5a1ab04a1bcdf3e6181db4 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,645   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.11.0-cp39-cp39-linux_armv6l.whl#sha256=cf0f84e93c37e45f16710db8ab2155eac9521fcd6c5a1ab04a1bcdf3e6181db4 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,646   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.11.0-cp37-cp37m-linux_armv7l.whl#sha256=22e03ab06b064da0d834a64791b99cce4ee229fff085a72f4d3fba4ad28dd138 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,646   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.11.0-cp37-cp37m-linux_armv6l.whl#sha256=22e03ab06b064da0d834a64791b99cce4ee229fff085a72f4d3fba4ad28dd138 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,646   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.11.0-cp35-cp35m-linux_armv6l.whl#sha256=b022f7170e31e5ca6fe964c68e1c33a6ebfce93239846e10d7ed0ffcd2a614b0 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,647   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.11.0-cp35-cp35m-linux_armv7l.whl#sha256=b022f7170e31e5ca6fe964c68e1c33a6ebfce93239846e10d7ed0ffcd2a614b0 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,647   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.10.2-cp311-cp311-linux_armv7l.whl#sha256=3423c2c7f9f5d3505ccda1d223070089ededd194c3f5220a9cc25db3196a02e1 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,648   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.10.2-cp311-cp311-linux_armv6l.whl#sha256=3423c2c7f9f5d3505ccda1d223070089ededd194c3f5220a9cc25db3196a02e1 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,648   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.10.2-cp39-cp39-linux_armv7l.whl#sha256=023ec78da63d56760ec9dd11589bf98c1db83b3f8bc6d04e676b2b164c2d0529 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,649   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.10.2-cp39-cp39-linux_armv6l.whl#sha256=023ec78da63d56760ec9dd11589bf98c1db83b3f8bc6d04e676b2b164c2d0529 (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,649   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.10.2-cp37-cp37m-linux_armv6l.whl#sha256=ab0ae85a7b70a74a3ac35110b1b4f5bc6349c0da0e2f7c8775115864b328ed8b (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,650   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.10.2-cp37-cp37m-linux_armv7l.whl#sha256=ab0ae85a7b70a74a3ac35110b1b4f5bc6349c0da0e2f7c8775115864b328ed8b (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,650   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.10.2-cp35-cp35m-linux_armv7l.whl#sha256=f69b4c4dff49c2e1fd3f6df87126e5e3e9ad8df06fcec43351d5174558abceed (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,651   Skipping link: No binaries permitted for ngs-plumbing: https://www.piwheels.org/simple/ngs-plumbing/ngs_plumbing-0.10.2-cp35-cp35m-linux_armv6l.whl#sha256=f69b4c4dff49c2e1fd3f6df87126e5e3e9ad8df06fcec43351d5174558abceed (from https://www.piwheels.org/simple/ngs-plumbing/)
2023-09-08T11:53:09,651 Skipping link: not a file: https://www.piwheels.org/simple/ngs-plumbing/
2023-09-08T11:53:09,652 Skipping link: not a file: https://pypi.org/simple/ngs-plumbing/
2023-09-08T11:53:09,673 Given no hashes to check 1 links for project 'ngs-plumbing': discarding no candidates
2023-09-08T11:53:09,691 Collecting ngs-plumbing==0.12.3
2023-09-08T11:53:09,694   Created temporary directory: /tmp/pip-unpack-2udyg7xk
2023-09-08T11:53:10,570   Downloading ngs_plumbing-0.12.3.tar.gz (327 kB)
2023-09-08T11:53:10,833   Added ngs-plumbing==0.12.3 from https://files.pythonhosted.org/packages/03/0d/4c2d5c9ad4517970df0e2f6c8827d3c10f324883326a63c7e589042dbd17/ngs_plumbing-0.12.3.tar.gz to build tracker '/tmp/pip-build-tracker-zdmn4y28'
2023-09-08T11:53:10,835   Running setup.py (path:/tmp/pip-wheel-9ftxtjdc/ngs-plumbing_d87d788f9bbd4a229fa82a505fa991ee/setup.py) egg_info for package ngs-plumbing
2023-09-08T11:53:10,836   Created temporary directory: /tmp/pip-pip-egg-info-o4304ftr
2023-09-08T11:53:10,836   Preparing metadata (setup.py): started
2023-09-08T11:53:10,838   Running command python setup.py egg_info
2023-09-08T11:53:11,852   running egg_info
2023-09-08T11:53:11,853   creating /tmp/pip-pip-egg-info-o4304ftr/ngs_plumbing.egg-info
2023-09-08T11:53:11,877   writing /tmp/pip-pip-egg-info-o4304ftr/ngs_plumbing.egg-info/PKG-INFO
2023-09-08T11:53:11,880   writing dependency_links to /tmp/pip-pip-egg-info-o4304ftr/ngs_plumbing.egg-info/dependency_links.txt
2023-09-08T11:53:11,882   writing entry points to /tmp/pip-pip-egg-info-o4304ftr/ngs_plumbing.egg-info/entry_points.txt
2023-09-08T11:53:11,884   writing top-level names to /tmp/pip-pip-egg-info-o4304ftr/ngs_plumbing.egg-info/top_level.txt
2023-09-08T11:53:11,885   writing manifest file '/tmp/pip-pip-egg-info-o4304ftr/ngs_plumbing.egg-info/SOURCES.txt'
2023-09-08T11:53:11,984   reading manifest file '/tmp/pip-pip-egg-info-o4304ftr/ngs_plumbing.egg-info/SOURCES.txt'
2023-09-08T11:53:11,985   reading manifest template 'MANIFEST.in'
2023-09-08T11:53:11,988   adding license file 'COPYING'
2023-09-08T11:53:11,991   writing manifest file '/tmp/pip-pip-egg-info-o4304ftr/ngs_plumbing.egg-info/SOURCES.txt'

2023-09-08T11:53:11,993   Warning: The Python package 'h5py' cannot be imported.
2023-09-08T11:53:11,994   Without it, capabilities related to the XSQ format cannot be used.
2023-09-08T11:53:12,103   Preparing metadata (setup.py): finished with status 'done'
2023-09-08T11:53:12,107   Source in /tmp/pip-wheel-9ftxtjdc/ngs-plumbing_d87d788f9bbd4a229fa82a505fa991ee has version 0.12.3, which satisfies requirement ngs-plumbing==0.12.3 from https://files.pythonhosted.org/packages/03/0d/4c2d5c9ad4517970df0e2f6c8827d3c10f324883326a63c7e589042dbd17/ngs_plumbing-0.12.3.tar.gz
2023-09-08T11:53:12,108   Removed ngs-plumbing==0.12.3 from https://files.pythonhosted.org/packages/03/0d/4c2d5c9ad4517970df0e2f6c8827d3c10f324883326a63c7e589042dbd17/ngs_plumbing-0.12.3.tar.gz from build tracker '/tmp/pip-build-tracker-zdmn4y28'
2023-09-08T11:53:12,111 Created temporary directory: /tmp/pip-unpack-dcnjbdvz
2023-09-08T11:53:12,112 Created temporary directory: /tmp/pip-unpack-5qxx1iqo
2023-09-08T11:53:12,115 Building wheels for collected packages: ngs-plumbing
2023-09-08T11:53:12,119   Created temporary directory: /tmp/pip-wheel-lw6wcs07
2023-09-08T11:53:12,119   Building wheel for ngs-plumbing (setup.py): started
2023-09-08T11:53:12,121   Destination directory: /tmp/pip-wheel-lw6wcs07
2023-09-08T11:53:12,121   Running command python setup.py bdist_wheel
2023-09-08T11:53:13,117   running bdist_wheel
2023-09-08T11:53:13,211   running build
2023-09-08T11:53:13,211   running build_py
2023-09-08T11:53:13,239   creating build
2023-09-08T11:53:13,240   creating build/lib.linux-armv7l-cpython-311
2023-09-08T11:53:13,240   creating build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,241   copying src/report.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,244   copying src/_libdnaqual_test.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,245   copying src/fasta_test.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,247   copying src/dna.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,249   copying src/intervals_test.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,252   copying src/colorspace.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,254   copying src/tests.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,256   copying src/fasta.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,258   copying src/dnaqual_test.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,260   copying src/fastq_test.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,262   copying src/_libdna_test.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,264   copying src/xsq.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,267   copying src/_libxsq_test.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,269   copying src/kmers_test.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,270   copying src/kmers.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,272   copying src/ngsp_string.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,274   copying src/dna_test.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,276   copying src/__init__.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,278   copying src/intervals.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,280   copying src/dnaqual.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,282   copying src/xsq_test.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,284   copying src/scons.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,286   copying src/bam.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,288   copying src/xsqconvert.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,290   copying src/parsing.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,292   copying src/fastq.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,294   copying src/ngsp_string_test.py -> build/lib.linux-armv7l-cpython-311/ngs_plumbing
2023-09-08T11:53:13,296   creating build/lib.linux-armv7l-cpython-311/ngs_plumbing/data
2023-09-08T11:53:13,297   creating build/lib.linux-armv7l-cpython-311/ngs_plumbing/data/test_run
2023-09-08T11:53:13,297   creating build/lib.linux-armv7l-cpython-311/ngs_plumbing/data/test_run/test_run_2012_01_08_Prof_X
2023-09-08T11:53:13,298   creating build/lib.linux-armv7l-cpython-311/ngs_plumbing/data/test_run/test_run_2012_01_08_Prof_X/result
2023-09-08T11:53:13,299   creating build/lib.linux-armv7l-cpython-311/ngs_plumbing/data/test_run/test_run_2012_01_08_Prof_X/result/lane1
2023-09-08T11:53:13,300   copying src/data/test_run/test_run_2012_01_08_Prof_X/result/lane1/test_run_2012_01_08_Prof_X_01.xsq -> build/lib.linux-armv7l-cpython-311/ngs_plumbing/data/test_run/test_run_2012_01_08_Prof_X/result/lane1
2023-09-08T11:53:13,307   creating build/lib.linux-armv7l-cpython-311/ngs_plumbing/data/html
2023-09-08T11:53:13,307   creating build/lib.linux-armv7l-cpython-311/ngs_plumbing/data/html/templates
2023-09-08T11:53:13,308   copying src/data/html/templates/xsqlibreport.html -> build/lib.linux-armv7l-cpython-311/ngs_plumbing/data/html/templates
2023-09-08T11:53:13,311   copying src/data/html/readqual.js -> build/lib.linux-armv7l-cpython-311/ngs_plumbing/data/html
2023-09-08T11:53:13,313   copying src/data/reads.fq -> build/lib.linux-armv7l-cpython-311/ngs_plumbing/data
2023-09-08T11:53:13,317   running build_ext
2023-09-08T11:53:13,827   building 'ngs_plumbing._libxsq' extension
2023-09-08T11:53:13,827   creating build/temp.linux-armv7l-cpython-311
2023-09-08T11:53:13,828   creating build/temp.linux-armv7l-cpython-311/src
2023-09-08T11:53:13,829   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I. -I/usr/include/python3.11 -c src/_libxsq.c -o build/temp.linux-armv7l-cpython-311/src/_libxsq.o -Wall -O3 -funroll-loops
2023-09-08T11:53:14,200   src/_libxsq.c: In function ‘PyInit__libxsq’:
2023-09-08T11:53:14,201   src/_libxsq.c:352:17: warning: variable ‘d’ set but not used [-Wunused-but-set-variable]
2023-09-08T11:53:14,202     352 |   PyObject *m, *d;
2023-09-08T11:53:14,203         |                 ^
2023-09-08T11:53:14,804   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/_libxsq.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/ngs_plumbing/_libxsq.cpython-311-arm-linux-gnueabihf.so -g
2023-09-08T11:53:14,903   building 'ngs_plumbing._libdna' extension
2023-09-08T11:53:14,903   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I. -I/usr/include/python3.11 -c src/_libdna.c -o build/temp.linux-armv7l-cpython-311/src/_libdna.o -Wall -O3 -funroll-loops
2023-09-08T11:53:15,258   src/_libdna.c: In function ‘bytes_to_bit2’:
2023-09-08T11:53:15,259   src/_libdna.c:114:18: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-09-08T11:53:15,259     114 |       if (bitpos == -2) {
2023-09-08T11:53:15,260         |                  ^~
2023-09-08T11:53:16,930   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/_libdna.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/ngs_plumbing/_libdna.cpython-311-arm-linux-gnueabihf.so -g
2023-09-08T11:53:17,027   building 'ngs_plumbing._libdnaqual' extension
2023-09-08T11:53:17,027   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I. -I/usr/include/python3.11 -c src/_libdnaqual.c -o build/temp.linux-armv7l-cpython-311/src/_libdnaqual.o -Wall -O3 -funroll-loops
2023-09-08T11:53:17,496   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/_libdnaqual.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/ngs_plumbing/_libdnaqual.cpython-311-arm-linux-gnueabihf.so -g
2023-09-08T11:53:17,612   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-09-08T11:53:17,613   !!

2023-09-08T11:53:17,614           ********************************************************************************
2023-09-08T11:53:17,614           Please avoid running ``setup.py`` directly.
2023-09-08T11:53:17,615           Instead, use pypa/build, pypa/installer or other
2023-09-08T11:53:17,615           standards-based tools.

2023-09-08T11:53:17,616           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-09-08T11:53:17,616           ********************************************************************************

2023-09-08T11:53:17,617   !!
2023-09-08T11:53:17,618     self.initialize_options()
2023-09-08T11:53:17,640   installing to build/bdist.linux-armv7l/wheel
2023-09-08T11:53:17,640   running install
2023-09-08T11:53:17,665   running install_lib
2023-09-08T11:53:17,688   creating build/bdist.linux-armv7l
2023-09-08T11:53:17,689   creating build/bdist.linux-armv7l/wheel
2023-09-08T11:53:17,691   creating build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,692   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/report.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,694   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/_libdnaqual_test.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,695   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/fasta_test.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,697   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/dna.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,699   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/intervals_test.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,701   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/colorspace.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,703   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/_libxsq.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,706   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/tests.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,708   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/_libdna.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,712   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/fasta.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,714   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/dnaqual_test.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,716   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/fastq_test.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,717   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/_libdna_test.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,719   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/xsq.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,722   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/_libxsq_test.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,724   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/kmers_test.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,726   creating build/bdist.linux-armv7l/wheel/ngs_plumbing/data
2023-09-08T11:53:17,728   creating build/bdist.linux-armv7l/wheel/ngs_plumbing/data/html
2023-09-08T11:53:17,729   creating build/bdist.linux-armv7l/wheel/ngs_plumbing/data/html/templates
2023-09-08T11:53:17,730   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/data/html/templates/xsqlibreport.html -> build/bdist.linux-armv7l/wheel/ngs_plumbing/data/html/templates
2023-09-08T11:53:17,732   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/data/html/readqual.js -> build/bdist.linux-armv7l/wheel/ngs_plumbing/data/html
2023-09-08T11:53:17,734   creating build/bdist.linux-armv7l/wheel/ngs_plumbing/data/test_run
2023-09-08T11:53:17,736   creating build/bdist.linux-armv7l/wheel/ngs_plumbing/data/test_run/test_run_2012_01_08_Prof_X
2023-09-08T11:53:17,737   creating build/bdist.linux-armv7l/wheel/ngs_plumbing/data/test_run/test_run_2012_01_08_Prof_X/result
2023-09-08T11:53:17,738   creating build/bdist.linux-armv7l/wheel/ngs_plumbing/data/test_run/test_run_2012_01_08_Prof_X/result/lane1
2023-09-08T11:53:17,739   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/data/test_run/test_run_2012_01_08_Prof_X/result/lane1/test_run_2012_01_08_Prof_X_01.xsq -> build/bdist.linux-armv7l/wheel/ngs_plumbing/data/test_run/test_run_2012_01_08_Prof_X/result/lane1
2023-09-08T11:53:17,747   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/data/reads.fq -> build/bdist.linux-armv7l/wheel/ngs_plumbing/data
2023-09-08T11:53:17,750   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/kmers.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,752   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/ngsp_string.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,753   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/_libdnaqual.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,756   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/dna_test.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,757   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/__init__.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,759   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/intervals.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,761   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/dnaqual.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,763   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/xsq_test.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,765   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/scons.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,767   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/bam.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,769   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/xsqconvert.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,771   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/parsing.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,772   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/fastq.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,775   copying build/lib.linux-armv7l-cpython-311/ngs_plumbing/ngsp_string_test.py -> build/bdist.linux-armv7l/wheel/ngs_plumbing
2023-09-08T11:53:17,776   running install_headers
2023-09-08T11:53:17,801   creating build/bdist.linux-armv7l/wheel/ngs_plumbing-0.12.3.data
2023-09-08T11:53:17,801   creating build/bdist.linux-armv7l/wheel/ngs_plumbing-0.12.3.data/headers
2023-09-08T11:53:17,802   copying src/_libdna.h -> build/bdist.linux-armv7l/wheel/ngs_plumbing-0.12.3.data/headers
2023-09-08T11:53:17,804   copying src/bitpack.h -> build/bdist.linux-armv7l/wheel/ngs_plumbing-0.12.3.data/headers
2023-09-08T11:53:17,805   running install_egg_info
2023-09-08T11:53:17,865   running egg_info
2023-09-08T11:53:17,889   writing ngs_plumbing.egg-info/PKG-INFO
2023-09-08T11:53:17,892   writing dependency_links to ngs_plumbing.egg-info/dependency_links.txt
2023-09-08T11:53:17,894   writing entry points to ngs_plumbing.egg-info/entry_points.txt
2023-09-08T11:53:17,896   writing top-level names to ngs_plumbing.egg-info/top_level.txt
2023-09-08T11:53:17,942   reading manifest file 'ngs_plumbing.egg-info/SOURCES.txt'
2023-09-08T11:53:17,945   reading manifest template 'MANIFEST.in'
2023-09-08T11:53:17,949   adding license file 'COPYING'
2023-09-08T11:53:17,954   writing manifest file 'ngs_plumbing.egg-info/SOURCES.txt'
2023-09-08T11:53:17,956   Copying ngs_plumbing.egg-info to build/bdist.linux-armv7l/wheel/ngs_plumbing-0.12.3-py3.11.egg-info
2023-09-08T11:53:17,969   running install_scripts
2023-09-08T11:53:18,030   creating build/bdist.linux-armv7l/wheel/ngs_plumbing-0.12.3.dist-info/WHEEL
2023-09-08T11:53:18,032   creating '/tmp/pip-wheel-lw6wcs07/ngs_plumbing-0.12.3-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-09-08T11:53:18,034   adding 'ngs_plumbing/__init__.py'
2023-09-08T11:53:18,048   adding 'ngs_plumbing/_libdna.cpython-311-arm-linux-gnueabihf.so'
2023-09-08T11:53:18,050   adding 'ngs_plumbing/_libdna_test.py'
2023-09-08T11:53:18,054   adding 'ngs_plumbing/_libdnaqual.cpython-311-arm-linux-gnueabihf.so'
2023-09-08T11:53:18,056   adding 'ngs_plumbing/_libdnaqual_test.py'
2023-09-08T11:53:18,063   adding 'ngs_plumbing/_libxsq.cpython-311-arm-linux-gnueabihf.so'
2023-09-08T11:53:18,065   adding 'ngs_plumbing/_libxsq_test.py'
2023-09-08T11:53:18,066   adding 'ngs_plumbing/bam.py'
2023-09-08T11:53:18,068   adding 'ngs_plumbing/colorspace.py'
2023-09-08T11:53:18,069   adding 'ngs_plumbing/dna.py'
2023-09-08T11:53:18,071   adding 'ngs_plumbing/dna_test.py'
2023-09-08T11:53:18,072   adding 'ngs_plumbing/dnaqual.py'
2023-09-08T11:53:18,073   adding 'ngs_plumbing/dnaqual_test.py'
2023-09-08T11:53:18,075   adding 'ngs_plumbing/fasta.py'
2023-09-08T11:53:18,076   adding 'ngs_plumbing/fasta_test.py'
2023-09-08T11:53:18,078   adding 'ngs_plumbing/fastq.py'
2023-09-08T11:53:18,080   adding 'ngs_plumbing/fastq_test.py'
2023-09-08T11:53:18,081   adding 'ngs_plumbing/intervals.py'
2023-09-08T11:53:18,083   adding 'ngs_plumbing/intervals_test.py'
2023-09-08T11:53:18,084   adding 'ngs_plumbing/kmers.py'
2023-09-08T11:53:18,086   adding 'ngs_plumbing/kmers_test.py'
2023-09-08T11:53:18,087   adding 'ngs_plumbing/ngsp_string.py'
2023-09-08T11:53:18,089   adding 'ngs_plumbing/ngsp_string_test.py'
2023-09-08T11:53:18,090   adding 'ngs_plumbing/parsing.py'
2023-09-08T11:53:18,091   adding 'ngs_plumbing/report.py'
2023-09-08T11:53:18,093   adding 'ngs_plumbing/scons.py'
2023-09-08T11:53:18,094   adding 'ngs_plumbing/tests.py'
2023-09-08T11:53:18,098   adding 'ngs_plumbing/xsq.py'
2023-09-08T11:53:18,100   adding 'ngs_plumbing/xsq_test.py'
2023-09-08T11:53:18,102   adding 'ngs_plumbing/xsqconvert.py'
2023-09-08T11:53:18,108   adding 'ngs_plumbing/data/reads.fq'
2023-09-08T11:53:18,110   adding 'ngs_plumbing/data/html/readqual.js'
2023-09-08T11:53:18,112   adding 'ngs_plumbing/data/html/templates/xsqlibreport.html'
2023-09-08T11:53:18,152   adding 'ngs_plumbing/data/test_run/test_run_2012_01_08_Prof_X/result/lane1/test_run_2012_01_08_Prof_X_01.xsq'
2023-09-08T11:53:18,157   adding 'ngs_plumbing-0.12.3.data/headers/_libdna.h'
2023-09-08T11:53:18,158   adding 'ngs_plumbing-0.12.3.data/headers/bitpack.h'
2023-09-08T11:53:18,165   adding 'ngs_plumbing-0.12.3.dist-info/COPYING'
2023-09-08T11:53:18,166   adding 'ngs_plumbing-0.12.3.dist-info/METADATA'
2023-09-08T11:53:18,167   adding 'ngs_plumbing-0.12.3.dist-info/WHEEL'
2023-09-08T11:53:18,168   adding 'ngs_plumbing-0.12.3.dist-info/entry_points.txt'
2023-09-08T11:53:18,169   adding 'ngs_plumbing-0.12.3.dist-info/top_level.txt'
2023-09-08T11:53:18,170   adding 'ngs_plumbing-0.12.3.dist-info/RECORD'
2023-09-08T11:53:18,175   removing build/bdist.linux-armv7l/wheel

2023-09-08T11:53:18,188   Warning: The Python package 'h5py' cannot be imported.
2023-09-08T11:53:18,189   Without it, capabilities related to the XSQ format cannot be used.
2023-09-08T11:53:18,336   Building wheel for ngs-plumbing (setup.py): finished with status 'done'
2023-09-08T11:53:18,343   Created wheel for ngs-plumbing: filename=ngs_plumbing-0.12.3-cp311-cp311-linux_armv7l.whl size=377278 sha256=29951f863ccf4aa848ddc09041d2cb4afd9a53218d7a963a9912763393b4a8cb
2023-09-08T11:53:18,345   Stored in directory: /tmp/pip-ephem-wheel-cache-b6hqy7g9/wheels/4d/88/93/487755c3f4c513ccd546906f608eef8a24d9bb012518bfdbd9
2023-09-08T11:53:18,357 Successfully built ngs-plumbing
2023-09-08T11:53:18,369 Removed build tracker: '/tmp/pip-build-tracker-zdmn4y28'