2023-09-08T13:05:36,285 Created temporary directory: /tmp/pip-build-tracker-kpkdutcs 2023-09-08T13:05:36,287 Initialized build tracking at /tmp/pip-build-tracker-kpkdutcs 2023-09-08T13:05:36,287 Created build tracker: /tmp/pip-build-tracker-kpkdutcs 2023-09-08T13:05:36,288 Entered build tracker: /tmp/pip-build-tracker-kpkdutcs 2023-09-08T13:05:36,288 Created temporary directory: /tmp/pip-wheel-ufttz_q_ 2023-09-08T13:05:36,292 Created temporary directory: /tmp/pip-ephem-wheel-cache-hpdssvo3 2023-09-08T13:05:36,313 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-08T13:05:36,317 2 location(s) to search for versions of biofrills: 2023-09-08T13:05:36,317 * https://pypi.org/simple/biofrills/ 2023-09-08T13:05:36,317 * https://www.piwheels.org/simple/biofrills/ 2023-09-08T13:05:36,318 Fetching project page and analyzing links: https://pypi.org/simple/biofrills/ 2023-09-08T13:05:36,319 Getting page https://pypi.org/simple/biofrills/ 2023-09-08T13:05:36,320 Found index url https://pypi.org/simple/ 2023-09-08T13:05:36,462 Fetched page https://pypi.org/simple/biofrills/ as application/vnd.pypi.simple.v1+json 2023-09-08T13:05:36,464 Found link https://files.pythonhosted.org/packages/f7/ff/87dde3f9615bbf18440577363ca8a55e256f33187ad7ae5c4b23bcfd9d51/biofrills-0.1.0.tar.gz (from https://pypi.org/simple/biofrills/), version: 0.1.0 2023-09-08T13:05:36,465 Found link https://files.pythonhosted.org/packages/a4/dd/c9a6a17f04c249a322263175900d42b515f7e0dc28e77c81f7a0ac268930/biofrills-0.2.0.linux-x86_64.tar.gz (from https://pypi.org/simple/biofrills/), version: 0.2.0.linux-x86_64 2023-09-08T13:05:36,466 Found link https://files.pythonhosted.org/packages/2d/66/9527df165e5c76b95d7e2713216b58e8252f0ab9fc4bd572049428dda474/biofrills-0.2.0.tar.gz (from https://pypi.org/simple/biofrills/), version: 0.2.0 2023-09-08T13:05:36,466 Found link https://files.pythonhosted.org/packages/3f/b0/287f3a27448730c69af668d455f91f3827c6d350706a478d0848e086af0e/biofrills-0.3.linux-x86_64.tar.gz (from https://pypi.org/simple/biofrills/), version: 0.3.linux-x86_64 2023-09-08T13:05:36,467 Found link https://files.pythonhosted.org/packages/eb/67/2ec579007e4b04367bb1bfa9c7495e0ff86d8ed3a0c4fbd7085ee1154320/biofrills-0.3.linux-x86_64.zip (from https://pypi.org/simple/biofrills/), version: 0.3.linux-x86_64 2023-09-08T13:05:36,468 Found link https://files.pythonhosted.org/packages/fa/f7/349c76268474dc83125a3ab2bff829545953c70fdca749770da6b043e098/biofrills-0.3.tar.gz (from https://pypi.org/simple/biofrills/), version: 0.3 2023-09-08T13:05:36,469 Found link https://files.pythonhosted.org/packages/4e/e5/9fb7492efd804dfdf696e4d3348bda749269ad6efed94bf738ca0d96d5fa/biofrills-0.3.zip (from https://pypi.org/simple/biofrills/), version: 0.3 2023-09-08T13:05:36,469 Found link https://files.pythonhosted.org/packages/6d/95/2d5942738693741cd4258ad965e0bc7b63a4f4f97b3a2af0ae67915d5de8/biofrills-0.3.1.tar.gz (from https://pypi.org/simple/biofrills/), version: 0.3.1 2023-09-08T13:05:36,470 Fetching project page and analyzing links: https://www.piwheels.org/simple/biofrills/ 2023-09-08T13:05:36,471 Getting page https://www.piwheels.org/simple/biofrills/ 2023-09-08T13:05:36,472 Found index url https://www.piwheels.org/simple/ 2023-09-08T13:05:43,385 Fetched page https://www.piwheels.org/simple/biofrills/ as text/html 2023-09-08T13:05:43,404 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.3.1-cp39-cp39-linux_armv7l.whl#sha256=014ac6ebf220a7f0eaea654af3bd7be834ef6e6e80da4e86164d4cd6e2b0092c (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,405 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.3.1-cp39-cp39-linux_armv6l.whl#sha256=014ac6ebf220a7f0eaea654af3bd7be834ef6e6e80da4e86164d4cd6e2b0092c (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,405 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.3.1-cp37-cp37m-linux_armv6l.whl#sha256=22ebb4abff26c8b4c775cc79f9556bca1882082ea4f91f963e6e16914c3e7a9a (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,406 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.3.1-cp37-cp37m-linux_armv7l.whl#sha256=22ebb4abff26c8b4c775cc79f9556bca1882082ea4f91f963e6e16914c3e7a9a (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,408 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.3.1-cp34-cp34m-linux_armv7l.whl#sha256=3eaa02992153b9d8a6434938c607c78d796d460963353dc3ad44b6176d28905d (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,408 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.3.1-cp34-cp34m-linux_armv6l.whl#sha256=3eaa02992153b9d8a6434938c607c78d796d460963353dc3ad44b6176d28905d (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,409 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.3.1-cp35-cp35m-linux_armv6l.whl#sha256=fe2de57175a0321e9f0f4af4f2d3287b3a85b40bad7ca6eec7cfffdd4a701e31 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,410 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.3.1-cp35-cp35m-linux_armv7l.whl#sha256=fe2de57175a0321e9f0f4af4f2d3287b3a85b40bad7ca6eec7cfffdd4a701e31 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,410 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.3-cp311-cp311-linux_armv7l.whl#sha256=0683afd5fb6de473287edad903d3ff14833082baab68730771a32487d687ea4b (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,411 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.3-cp311-cp311-linux_armv6l.whl#sha256=0683afd5fb6de473287edad903d3ff14833082baab68730771a32487d687ea4b (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,412 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.3-cp39-cp39-linux_armv7l.whl#sha256=ac17e7f588ea1ae02fc32705b8dfd34306f219d3971446d0d8745444ea100188 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,413 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.3-cp39-cp39-linux_armv6l.whl#sha256=ac17e7f588ea1ae02fc32705b8dfd34306f219d3971446d0d8745444ea100188 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,413 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.3-cp37-cp37m-linux_armv6l.whl#sha256=2dbc841f2e304bb9e721811dd4b77c9de07da7051e37dbba76a7d9b32b63e9de (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,414 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.3-cp37-cp37m-linux_armv7l.whl#sha256=2dbc841f2e304bb9e721811dd4b77c9de07da7051e37dbba76a7d9b32b63e9de (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,415 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.3-cp35-cp35m-linux_armv7l.whl#sha256=5991651df4b03524a8468d01f8953ed48748a4e770ba0e34b5f6b7c26c101012 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,416 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.3-cp35-cp35m-linux_armv6l.whl#sha256=5991651df4b03524a8468d01f8953ed48748a4e770ba0e34b5f6b7c26c101012 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,417 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.3-cp34-cp34m-linux_armv7l.whl#sha256=31634905b8a858f286835915c6a5f60783f5f76148b4fcbebe8f54013f8e2e91 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,418 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.3-cp34-cp34m-linux_armv6l.whl#sha256=31634905b8a858f286835915c6a5f60783f5f76148b4fcbebe8f54013f8e2e91 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,419 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.2.0-cp311-cp311-linux_armv7l.whl#sha256=f84121dab9e03bcb77f182b582c926ea7197efff955c0ae00c0ebcc784c2b137 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,419 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.2.0-cp311-cp311-linux_armv6l.whl#sha256=f84121dab9e03bcb77f182b582c926ea7197efff955c0ae00c0ebcc784c2b137 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,420 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.2.0-cp39-cp39-linux_armv7l.whl#sha256=fb4234fb3a89023e500ace8e972f0967d6b874df4e25c07d7319fc483e83dde4 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,421 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.2.0-cp39-cp39-linux_armv6l.whl#sha256=fb4234fb3a89023e500ace8e972f0967d6b874df4e25c07d7319fc483e83dde4 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,421 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.2.0-cp37-cp37m-linux_armv7l.whl#sha256=8e60a669bc206ae761d2eae112033332a1efadbea7bd0f550a64591acf57b86c (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,422 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.2.0-cp37-cp37m-linux_armv6l.whl#sha256=8e60a669bc206ae761d2eae112033332a1efadbea7bd0f550a64591acf57b86c (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,423 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.2.0-cp34-cp34m-linux_armv7l.whl#sha256=48f4d534ead46160c81f7808e971d99ecf8eb1fe5e9309129b8f9b18e6538e94 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,423 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.2.0-cp34-cp34m-linux_armv6l.whl#sha256=48f4d534ead46160c81f7808e971d99ecf8eb1fe5e9309129b8f9b18e6538e94 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,424 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.2.0-cp35-cp35m-linux_armv7l.whl#sha256=304d0c8a8e062b0c47fe620ceb1bc9fef088a21cb19c44619219a3b613582a72 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,425 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.2.0-cp35-cp35m-linux_armv6l.whl#sha256=304d0c8a8e062b0c47fe620ceb1bc9fef088a21cb19c44619219a3b613582a72 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,426 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.1.0-cp311-cp311-linux_armv7l.whl#sha256=b3ccb189953d87d997f881f076bf89a2a6eca9512b080332354194adbe133cb7 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,427 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.1.0-cp311-cp311-linux_armv6l.whl#sha256=b3ccb189953d87d997f881f076bf89a2a6eca9512b080332354194adbe133cb7 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,428 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.1.0-cp39-cp39-linux_armv7l.whl#sha256=0213729dea54640b0ba1e393e7121ef763e6808d99ae74a1c8f2d3e47a5d54de (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,428 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.1.0-cp39-cp39-linux_armv6l.whl#sha256=0213729dea54640b0ba1e393e7121ef763e6808d99ae74a1c8f2d3e47a5d54de (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,429 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.1.0-cp37-cp37m-linux_armv6l.whl#sha256=eb9bbdcc22b54a7f0ff42a1d48565ddfb6970091386a8c40321aeb7e4ea61755 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,430 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.1.0-cp37-cp37m-linux_armv7l.whl#sha256=eb9bbdcc22b54a7f0ff42a1d48565ddfb6970091386a8c40321aeb7e4ea61755 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,431 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.1.0-cp35-cp35m-linux_armv6l.whl#sha256=8b1fc8ffee56128566f140c1ffe8889cd61cb48228c61ab66cdc7211a3f36be0 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,432 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.1.0-cp35-cp35m-linux_armv7l.whl#sha256=8b1fc8ffee56128566f140c1ffe8889cd61cb48228c61ab66cdc7211a3f36be0 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,433 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.1.0-cp34-cp34m-linux_armv7l.whl#sha256=175222bc7bec1a045b144df40f80cc109043433c0c75062dcc01f51a96df3714 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,433 Skipping link: No binaries permitted for biofrills: https://www.piwheels.org/simple/biofrills/biofrills-0.1.0-cp34-cp34m-linux_armv6l.whl#sha256=175222bc7bec1a045b144df40f80cc109043433c0c75062dcc01f51a96df3714 (from https://www.piwheels.org/simple/biofrills/) 2023-09-08T13:05:43,434 Skipping link: not a file: https://www.piwheels.org/simple/biofrills/ 2023-09-08T13:05:43,435 Skipping link: not a file: https://pypi.org/simple/biofrills/ 2023-09-08T13:05:43,464 Given no hashes to check 1 links for project 'biofrills': discarding no candidates 2023-09-08T13:05:43,482 Collecting biofrills==0.3.1 2023-09-08T13:05:43,484 Created temporary directory: /tmp/pip-unpack-hjyog9jg 2023-09-08T13:05:43,700 Downloading biofrills-0.3.1.tar.gz (49 kB) 2023-09-08T13:05:43,780 Added biofrills==0.3.1 from https://files.pythonhosted.org/packages/6d/95/2d5942738693741cd4258ad965e0bc7b63a4f4f97b3a2af0ae67915d5de8/biofrills-0.3.1.tar.gz to build tracker '/tmp/pip-build-tracker-kpkdutcs' 2023-09-08T13:05:43,781 Running setup.py (path:/tmp/pip-wheel-ufttz_q_/biofrills_71a73003f4ef40738a1c33a58c6efd97/setup.py) egg_info for package biofrills 2023-09-08T13:05:43,782 Created temporary directory: /tmp/pip-pip-egg-info-rhxc3jl2 2023-09-08T13:05:43,783 Preparing metadata (setup.py): started 2023-09-08T13:05:43,784 Running command python setup.py egg_info 2023-09-08T13:05:44,779 running egg_info 2023-09-08T13:05:44,781 creating /tmp/pip-pip-egg-info-rhxc3jl2/biofrills.egg-info 2023-09-08T13:05:44,804 writing /tmp/pip-pip-egg-info-rhxc3jl2/biofrills.egg-info/PKG-INFO 2023-09-08T13:05:44,807 writing dependency_links to /tmp/pip-pip-egg-info-rhxc3jl2/biofrills.egg-info/dependency_links.txt 2023-09-08T13:05:44,809 writing requirements to /tmp/pip-pip-egg-info-rhxc3jl2/biofrills.egg-info/requires.txt 2023-09-08T13:05:44,810 writing top-level names to /tmp/pip-pip-egg-info-rhxc3jl2/biofrills.egg-info/top_level.txt 2023-09-08T13:05:44,811 writing manifest file '/tmp/pip-pip-egg-info-rhxc3jl2/biofrills.egg-info/SOURCES.txt' 2023-09-08T13:05:44,886 reading manifest file '/tmp/pip-pip-egg-info-rhxc3jl2/biofrills.egg-info/SOURCES.txt' 2023-09-08T13:05:44,889 writing manifest file '/tmp/pip-pip-egg-info-rhxc3jl2/biofrills.egg-info/SOURCES.txt' 2023-09-08T13:05:45,000 Preparing metadata (setup.py): finished with status 'done' 2023-09-08T13:05:45,004 Source in /tmp/pip-wheel-ufttz_q_/biofrills_71a73003f4ef40738a1c33a58c6efd97 has version 0.3.1, which satisfies requirement biofrills==0.3.1 from https://files.pythonhosted.org/packages/6d/95/2d5942738693741cd4258ad965e0bc7b63a4f4f97b3a2af0ae67915d5de8/biofrills-0.3.1.tar.gz 2023-09-08T13:05:45,006 Removed biofrills==0.3.1 from https://files.pythonhosted.org/packages/6d/95/2d5942738693741cd4258ad965e0bc7b63a4f4f97b3a2af0ae67915d5de8/biofrills-0.3.1.tar.gz from build tracker '/tmp/pip-build-tracker-kpkdutcs' 2023-09-08T13:05:45,010 Created temporary directory: /tmp/pip-unpack-2m3f7_gu 2023-09-08T13:05:45,011 Created temporary directory: /tmp/pip-unpack-8d9wmhkj 2023-09-08T13:05:45,015 Building wheels for collected packages: biofrills 2023-09-08T13:05:45,019 Created temporary directory: /tmp/pip-wheel-06trf2pf 2023-09-08T13:05:45,019 Building wheel for biofrills (setup.py): started 2023-09-08T13:05:45,020 Destination directory: /tmp/pip-wheel-06trf2pf 2023-09-08T13:05:45,021 Running command python setup.py bdist_wheel 2023-09-08T13:05:46,011 running bdist_wheel 2023-09-08T13:05:46,079 running build 2023-09-08T13:05:46,080 running build_py 2023-09-08T13:05:46,106 creating build 2023-09-08T13:05:46,106 creating build/lib.linux-armv7l-cpython-311 2023-09-08T13:05:46,107 creating build/lib.linux-armv7l-cpython-311/biofrills 2023-09-08T13:05:46,108 copying biofrills/logoutils.py -> build/lib.linux-armv7l-cpython-311/biofrills 2023-09-08T13:05:46,110 copying biofrills/sequtils.py -> build/lib.linux-armv7l-cpython-311/biofrills 2023-09-08T13:05:46,112 copying biofrills/pairutils.py -> build/lib.linux-armv7l-cpython-311/biofrills 2023-09-08T13:05:46,114 copying biofrills/consensus.py -> build/lib.linux-armv7l-cpython-311/biofrills 2023-09-08T13:05:46,117 copying biofrills/__init__.py -> build/lib.linux-armv7l-cpython-311/biofrills 2023-09-08T13:05:46,118 copying biofrills/alnutils.py -> build/lib.linux-armv7l-cpython-311/biofrills 2023-09-08T13:05:46,121 creating build/lib.linux-armv7l-cpython-311/biofrills/stats 2023-09-08T13:05:46,122 copying biofrills/stats/chisq.py -> build/lib.linux-armv7l-cpython-311/biofrills/stats 2023-09-08T13:05:46,124 copying biofrills/stats/__init__.py -> build/lib.linux-armv7l-cpython-311/biofrills/stats 2023-09-08T13:05:46,126 running build_ext 2023-09-08T13:05:47,079 Compiling biofrills/cpairutils.pyx because it changed. 2023-09-08T13:05:47,080 [1/1] Cythonizing biofrills/cpairutils.pyx 2023-09-08T13:05:48,121 /usr/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-ufttz_q_/biofrills_71a73003f4ef40738a1c33a58c6efd97/biofrills/cpairutils.pyx 2023-09-08T13:05:48,121 tree = Parsing.p_module(s, pxd, full_module_name) 2023-09-08T13:05:50,185 building 'biofrills.cpairutils' extension 2023-09-08T13:05:50,186 creating build/temp.linux-armv7l-cpython-311 2023-09-08T13:05:50,186 creating build/temp.linux-armv7l-cpython-311/biofrills 2023-09-08T13:05:50,187 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c biofrills/cpairutils.c -o build/temp.linux-armv7l-cpython-311/biofrills/cpairutils.o 2023-09-08T13:05:59,662 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/biofrills/cpairutils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/biofrills/cpairutils.cpython-311-arm-linux-gnueabihf.so 2023-09-08T13:05:59,797 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-09-08T13:05:59,797 !! 2023-09-08T13:05:59,799 ******************************************************************************** 2023-09-08T13:05:59,799 Please avoid running ``setup.py`` directly. 2023-09-08T13:05:59,800 Instead, use pypa/build, pypa/installer or other 2023-09-08T13:05:59,800 standards-based tools. 2023-09-08T13:05:59,801 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-09-08T13:05:59,802 ******************************************************************************** 2023-09-08T13:05:59,803 !! 2023-09-08T13:05:59,803 self.initialize_options() 2023-09-08T13:05:59,823 installing to build/bdist.linux-armv7l/wheel 2023-09-08T13:05:59,823 running install 2023-09-08T13:05:59,847 running install_lib 2023-09-08T13:05:59,876 creating build/bdist.linux-armv7l 2023-09-08T13:05:59,877 creating build/bdist.linux-armv7l/wheel 2023-09-08T13:05:59,878 creating build/bdist.linux-armv7l/wheel/biofrills 2023-09-08T13:05:59,879 copying build/lib.linux-armv7l-cpython-311/biofrills/logoutils.py -> build/bdist.linux-armv7l/wheel/biofrills 2023-09-08T13:05:59,881 copying build/lib.linux-armv7l-cpython-311/biofrills/sequtils.py -> build/bdist.linux-armv7l/wheel/biofrills 2023-09-08T13:05:59,883 creating build/bdist.linux-armv7l/wheel/biofrills/stats 2023-09-08T13:05:59,884 copying build/lib.linux-armv7l-cpython-311/biofrills/stats/chisq.py -> build/bdist.linux-armv7l/wheel/biofrills/stats 2023-09-08T13:05:59,886 copying build/lib.linux-armv7l-cpython-311/biofrills/stats/__init__.py -> build/bdist.linux-armv7l/wheel/biofrills/stats 2023-09-08T13:05:59,888 copying build/lib.linux-armv7l-cpython-311/biofrills/pairutils.py -> build/bdist.linux-armv7l/wheel/biofrills 2023-09-08T13:05:59,890 copying build/lib.linux-armv7l-cpython-311/biofrills/cpairutils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/biofrills 2023-09-08T13:05:59,898 copying build/lib.linux-armv7l-cpython-311/biofrills/consensus.py -> build/bdist.linux-armv7l/wheel/biofrills 2023-09-08T13:05:59,900 copying build/lib.linux-armv7l-cpython-311/biofrills/__init__.py -> build/bdist.linux-armv7l/wheel/biofrills 2023-09-08T13:05:59,901 copying build/lib.linux-armv7l-cpython-311/biofrills/alnutils.py -> build/bdist.linux-armv7l/wheel/biofrills 2023-09-08T13:05:59,904 running install_egg_info 2023-09-08T13:06:00,042 running egg_info 2023-09-08T13:06:00,064 writing biofrills.egg-info/PKG-INFO 2023-09-08T13:06:00,067 writing dependency_links to biofrills.egg-info/dependency_links.txt 2023-09-08T13:06:00,069 writing requirements to biofrills.egg-info/requires.txt 2023-09-08T13:06:00,070 writing top-level names to biofrills.egg-info/top_level.txt 2023-09-08T13:06:00,097 reading manifest file 'biofrills.egg-info/SOURCES.txt' 2023-09-08T13:06:00,101 writing manifest file 'biofrills.egg-info/SOURCES.txt' 2023-09-08T13:06:00,102 Copying biofrills.egg-info to build/bdist.linux-armv7l/wheel/biofrills-0.3.1-py3.11.egg-info 2023-09-08T13:06:00,111 running install_scripts 2023-09-08T13:06:00,160 creating build/bdist.linux-armv7l/wheel/biofrills-0.3.1.dist-info/WHEEL 2023-09-08T13:06:00,162 creating '/tmp/pip-wheel-06trf2pf/biofrills-0.3.1-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-08T13:06:00,164 adding 'biofrills/__init__.py' 2023-09-08T13:06:00,166 adding 'biofrills/alnutils.py' 2023-09-08T13:06:00,168 adding 'biofrills/consensus.py' 2023-09-08T13:06:00,240 adding 'biofrills/cpairutils.cpython-311-arm-linux-gnueabihf.so' 2023-09-08T13:06:00,244 adding 'biofrills/logoutils.py' 2023-09-08T13:06:00,246 adding 'biofrills/pairutils.py' 2023-09-08T13:06:00,248 adding 'biofrills/sequtils.py' 2023-09-08T13:06:00,249 adding 'biofrills/stats/__init__.py' 2023-09-08T13:06:00,251 adding 'biofrills/stats/chisq.py' 2023-09-08T13:06:00,253 adding 'biofrills-0.3.1.dist-info/METADATA' 2023-09-08T13:06:00,254 adding 'biofrills-0.3.1.dist-info/WHEEL' 2023-09-08T13:06:00,255 adding 'biofrills-0.3.1.dist-info/top_level.txt' 2023-09-08T13:06:00,255 adding 'biofrills-0.3.1.dist-info/RECORD' 2023-09-08T13:06:00,258 removing build/bdist.linux-armv7l/wheel 2023-09-08T13:06:00,547 Building wheel for biofrills (setup.py): finished with status 'done' 2023-09-08T13:06:00,552 Created wheel for biofrills: filename=biofrills-0.3.1-cp311-cp311-linux_armv7l.whl size=161544 sha256=151ac627de37327d6e3e0b8c0f2f2f2f3e6bdcdb358878c19f341f2f61219740 2023-09-08T13:06:00,553 Stored in directory: /tmp/pip-ephem-wheel-cache-hpdssvo3/wheels/b9/fd/a0/a3007919722bf5b58a17471404bd686fc6340314924b5e92b1 2023-09-08T13:06:00,562 Successfully built biofrills 2023-09-08T13:06:00,571 Removed build tracker: '/tmp/pip-build-tracker-kpkdutcs'