2023-09-08T14:59:33,468 Created temporary directory: /tmp/pip-build-tracker-nvthrbyz
2023-09-08T14:59:33,469 Initialized build tracking at /tmp/pip-build-tracker-nvthrbyz
2023-09-08T14:59:33,469 Created build tracker: /tmp/pip-build-tracker-nvthrbyz
2023-09-08T14:59:33,470 Entered build tracker: /tmp/pip-build-tracker-nvthrbyz
2023-09-08T14:59:33,470 Created temporary directory: /tmp/pip-wheel-gumt31n7
2023-09-08T14:59:33,473 Created temporary directory: /tmp/pip-ephem-wheel-cache-y34hkah0
2023-09-08T14:59:33,495 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-08T14:59:33,499 2 location(s) to search for versions of openbabel:
2023-09-08T14:59:33,499 * https://pypi.org/simple/openbabel/
2023-09-08T14:59:33,499 * https://www.piwheels.org/simple/openbabel/
2023-09-08T14:59:33,500 Fetching project page and analyzing links: https://pypi.org/simple/openbabel/
2023-09-08T14:59:33,500 Getting page https://pypi.org/simple/openbabel/
2023-09-08T14:59:33,502 Found index url https://pypi.org/simple/
2023-09-08T14:59:33,645 Fetched page https://pypi.org/simple/openbabel/ as application/vnd.pypi.simple.v1+json
2023-09-08T14:59:33,654   Found link https://files.pythonhosted.org/packages/12/52/bb5e38737d41df09d11818031aa8de58620cd2689e872c9d3127d9eb9e37/openbabel-1.8.tar.gz (from https://pypi.org/simple/openbabel/), version: 1.8
2023-09-08T14:59:33,655   Found link https://files.pythonhosted.org/packages/af/63/976ef92f2eb827b0def52a69f537c9fe27754533e1f98735d167448894b2/openbabel-1.8.1.tar.gz (from https://pypi.org/simple/openbabel/), version: 1.8.1
2023-09-08T14:59:33,655   Found link https://files.pythonhosted.org/packages/41/46/5572ceaf814ca86894cc7a0847da5e89fc359a2b0970a7015cb67163d64a/openbabel-1.8.2.tar.gz (from https://pypi.org/simple/openbabel/), version: 1.8.2
2023-09-08T14:59:33,656   Found link https://files.pythonhosted.org/packages/fe/82/63910e38f48178dc6287c07272e9b486b436940d34a4b237a42bf4f7d40f/openbabel-1.8.4.tar.gz (from https://pypi.org/simple/openbabel/), version: 1.8.4
2023-09-08T14:59:33,657   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/6c/7c/1767429d25a0356867951530f071dcbd6e5605312418f7f5bb14bd46a510/openbabel-2.4.0-cp27-cp27m-macosx_10_11_x86_64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,657   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/5a/37/942e55a00f80f2ebdab4c78c83f11445e1f98bf8914a28f3af195eab9a89/openbabel-2.4.0-cp27-cp27m-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,658   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/5a/1d/d88ae45ac4216ebc96ad06d9f38dc5d697265d818ab056f5586cb1625d85/openbabel-2.4.0-cp27-cp27m-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,659   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/0c/51/4708c4f562a64f7348becd2b72e1dcdc79a8a3ffd05f042bc8a999228549/openbabel-2.4.0-cp34-cp34m-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,659   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/25/45/3c028047d525e149f0b8404d7cdbe85521d8c84edc8479e1a9ef5818fcd7/openbabel-2.4.0-cp34-cp34m-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,660   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/02/27/ad7186bface39f076a2658ead15fea603101c40992524491f2f069f2d669/openbabel-2.4.0-cp35-cp35m-macosx_10_11_x86_64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,660   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/80/fd/48436d0c173c24ec584589f301037fffe6be4acd6b02fb303cc6f96ebbbd/openbabel-2.4.0-cp35-cp35m-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,661   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/e4/ac/5a232012b06c05f33ed0b09e736d6e93479491be6418e279d4d14c4aaa0d/openbabel-2.4.0-cp35-cp35m-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,661   Found link https://files.pythonhosted.org/packages/ae/af/647b526abc984b4dbb92c170fb8052330036f66f9188f01c7a6170772c26/openbabel-2.4.0.tar.gz (from https://pypi.org/simple/openbabel/), version: 2.4.0
2023-09-08T14:59:33,662   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/d0/f7/c8d0e492ef43a384e711aee93fc33c57f20fddae9e177f5016251ee82197/openbabel-2.4.1-cp27-cp27m-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,663   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/f1/cc/c8aa7a2c1839ec8eac008f1aff677fe0e7a9c1fe335fcf6341ec8b639fbb/openbabel-2.4.1-cp27-cp27m-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,663   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/b4/9e/3f3e4fb99974a4c57a74b917c1962c3b85ece78276d539b3944a8f28e86e/openbabel-2.4.1-cp34-cp34m-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,664   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/f9/ff/ab0b9b62fe7702bb3cff21ab7181bc31904986776c444c1e2d9a522c7f87/openbabel-2.4.1-cp34-cp34m-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,664   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/ac/41/56090328ebc77c48ca3bc63867d9f0406a66b190091d5f9c2ac826d7076b/openbabel-2.4.1-cp35-cp35m-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,664   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/24/10/9b1519717a985ba77f733f8be8a53f61179562ad32f14b0b978f2321f46c/openbabel-2.4.1-cp35-cp35m-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,665   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/bc/fa/88f045c889f42272c829c7ecb57a45fba40e4e011186c69e3d3f97bf4487/openbabel-2.4.1-cp36-cp36m-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,665   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/b1/be/7d35e887a7b6c79aa6e658cddcf32430cea202bfe7301deff7addfee05e1/openbabel-2.4.1-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,666   Found link https://files.pythonhosted.org/packages/9c/30/eb9c3d3d3b86981f6c6a7b8eceb6f4a13b9a12673efbc842b7cebe0ce39a/openbabel-2.4.1.tar.gz (from https://pypi.org/simple/openbabel/), version: 2.4.1
2023-09-08T14:59:33,667   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/e0/af/2ddb13189563095a1ac917e8ba93ae5dd387487fa22fa2407f71c50788a2/openbabel-3.0.0a1-cp27-cp27m-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,667   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/08/5c/d89e561c86ff369159c5683b2bafbc63ad65759ffb4a076b99b7ed592f73/openbabel-3.0.0a1-cp27-cp27m-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,668   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/a8/50/6e3788ab2dcdb6bac56789cd064e17f3f39b2c23b3476826a6cae3b13ea6/openbabel-3.0.0a1-cp35-cp35m-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,669   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/85/07/461afd0234606736f3ff2c83b8f2de8956748505d1f87d9519fcbdafdd09/openbabel-3.0.0a1-cp35-cp35m-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,669   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/b2/80/33b2df12a8de30f352ebe164ce4c5edaca7416f6451e7ec3d259bd0a745d/openbabel-3.0.0a1-cp36-cp36m-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,670   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/45/cf/90cb228636c4e136f628e45b571f6c3232ffd3293d1c6e459cbe9f57d132/openbabel-3.0.0a1-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,670   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/20/83/658c9745dedf61d5670a0b381ae5c575f74764831d175b4b10d7cde9868e/openbabel-3.0.0a1-cp37-cp37m-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,671   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/11/07/76a50cd698820a62272dab11b0c825712dc896b29a75571581b9f9698e59/openbabel-3.0.0a1-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,671   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/7d/42/a64ad010f61916dcd1f965ee4a20218103eec70f61b3620b4de0160e1c37/openbabel-3.0.0a1-cp38-cp38-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,672   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/65/08/96d1404315da3ab3aff1c4558ba65bbd02e326d29af4b0947efb4f918c4b/openbabel-3.0.0a1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,672   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/33/49/9575b9637fe5e27a790c8a88a9fec28aa03bfd11e607eff2bf2d450f3bbf/openbabel-3.0.0-cp27-cp27m-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,673   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/51/cc/54b5b9f1c74dda56117cedebc68b6910300a802fc1904b7d2d6cecdcddb1/openbabel-3.0.0-cp27-cp27m-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,673   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/10/ae/df0ea01e56ae39ef7ba66642983334c77eb1cb4309e864252976149de68a/openbabel-3.0.0-cp35-cp35m-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,674   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/d0/bb/b2a95ca559f04b32cfb4aa26530aec978af4cc4204a3529925590fbb57ed/openbabel-3.0.0-cp35-cp35m-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,674   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/2f/db/0ab9172ad1be529d614189154566d7e4d6af96a9f3bc71b411d50efc13ba/openbabel-3.0.0-cp36-cp36m-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,675   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/66/5b/083b11614e9995ad7217b564e6532f85927c85f9052973754ae773b58b39/openbabel-3.0.0-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,675   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/2e/b7/faffc7a2f4cc2ab05dc99f3e1868b209a95215e052ddd1a0750564517819/openbabel-3.0.0-cp37-cp37m-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,676   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/3e/12/0c98c5871030100d645e59466399fd7072e60f201a6c4936abae49eaddb7/openbabel-3.0.0-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,677   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/4e/91/6a64f9a4bb6766f6d7d2e99ad8ccd0a40ba7ff004d594b69b92dd1982675/openbabel-3.1.1-cp27-cp27m-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,677   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/fc/83/70e05bd654e0e5cca1a22b31a434f3fc5ad9cee5dbef0dce44354fe413f5/openbabel-3.1.1-cp27-cp27m-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,678   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/83/af/1d8f8d1616b6d3f7ef3977d9848c4950766ccd8ce82858fa4259998f5754/openbabel-3.1.1-cp35-cp35m-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,678   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/89/26/226b4dd473df6e19c5e8ca8d1af4b85875d59ef571664639935686fcf611/openbabel-3.1.1-cp35-cp35m-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,679   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/31/05/7a11e23bd398c50c8df643dc0fca3a3faf6f144d0c6abf5b072d9d5103ca/openbabel-3.1.1-cp36-cp36m-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,679   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/60/d0/9dc7fcac9664546c5086d665a4df499b219238b610edf687a38d41d3bf5c/openbabel-3.1.1-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,680   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/35/ac/efa0326e86d44ca32e1e5772dcb6669c0c7e328b5cb6e78560e14dacda10/openbabel-3.1.1-cp37-cp37m-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,680   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/f9/33/d1cbfde28c463c53742415ab0f8173913f676ef34c5ab2b525b978c8a848/openbabel-3.1.1-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,681   Skipping link: No binaries permitted for openbabel: https://files.pythonhosted.org/packages/e2/98/17006b394fc7e3aa8b0607e6ab074b768644a217e7be17a13bc58cc31e9d/openbabel-3.1.1-cp38-cp38-win32.whl (from https://pypi.org/simple/openbabel/)
2023-09-08T14:59:33,681   Found link https://files.pythonhosted.org/packages/9d/3f/f08f5d1422d74ed0e1e612870b343bfcc26313bdf9efec9165c3ea4b3ae2/openbabel-3.1.1.1.tar.gz (from https://pypi.org/simple/openbabel/), version: 3.1.1.1
2023-09-08T14:59:33,682 Fetching project page and analyzing links: https://www.piwheels.org/simple/openbabel/
2023-09-08T14:59:33,683 Getting page https://www.piwheels.org/simple/openbabel/
2023-09-08T14:59:33,684 Found index url https://www.piwheels.org/simple/
2023-09-08T14:59:33,952 Fetched page https://www.piwheels.org/simple/openbabel/ as text/html
2023-09-08T14:59:33,953 Skipping link: not a file: https://www.piwheels.org/simple/openbabel/
2023-09-08T14:59:33,953 Skipping link: not a file: https://pypi.org/simple/openbabel/
2023-09-08T14:59:33,973 Given no hashes to check 1 links for project 'openbabel': discarding no candidates
2023-09-08T14:59:33,991 Collecting openbabel==1.8.1
2023-09-08T14:59:33,993   Created temporary directory: /tmp/pip-unpack-eic_o5sa
2023-09-08T14:59:34,208   Downloading openbabel-1.8.1.tar.gz (75 kB)
2023-09-08T14:59:34,322   Added openbabel==1.8.1 from https://files.pythonhosted.org/packages/af/63/976ef92f2eb827b0def52a69f537c9fe27754533e1f98735d167448894b2/openbabel-1.8.1.tar.gz to build tracker '/tmp/pip-build-tracker-nvthrbyz'
2023-09-08T14:59:34,324   Running setup.py (path:/tmp/pip-wheel-gumt31n7/openbabel_e6a83dab477b4cd8b5f169b9dba7a69e/setup.py) egg_info for package openbabel
2023-09-08T14:59:34,325   Created temporary directory: /tmp/pip-pip-egg-info-6gest7sd
2023-09-08T14:59:34,325   Preparing metadata (setup.py): started
2023-09-08T14:59:34,327   Running command python setup.py egg_info
2023-09-08T14:59:35,349   running egg_info
2023-09-08T14:59:35,351   creating /tmp/pip-pip-egg-info-6gest7sd/openbabel.egg-info
2023-09-08T14:59:35,374   writing /tmp/pip-pip-egg-info-6gest7sd/openbabel.egg-info/PKG-INFO
2023-09-08T14:59:35,379   writing dependency_links to /tmp/pip-pip-egg-info-6gest7sd/openbabel.egg-info/dependency_links.txt
2023-09-08T14:59:35,381   writing top-level names to /tmp/pip-pip-egg-info-6gest7sd/openbabel.egg-info/top_level.txt
2023-09-08T14:59:35,383   writing manifest file '/tmp/pip-pip-egg-info-6gest7sd/openbabel.egg-info/SOURCES.txt'
2023-09-08T14:59:35,411   file openbabel.py (for module openbabel) not found
2023-09-08T14:59:35,534   Warning: package openbabel-2.0 could not be found by pkg-config.
2023-09-08T14:59:35,534   Guessing Open Babel location:
2023-09-08T14:59:35,535   - include_dirs: /usr/local/include/openbabel-2.0
2023-09-08T14:59:35,535   - library_dirs: /usr/local/lib
2023-09-08T14:59:35,536   reading manifest file '/tmp/pip-pip-egg-info-6gest7sd/openbabel.egg-info/SOURCES.txt'
2023-09-08T14:59:35,536   reading manifest template 'MANIFEST.in'
2023-09-08T14:59:35,544   writing manifest file '/tmp/pip-pip-egg-info-6gest7sd/openbabel.egg-info/SOURCES.txt'
2023-09-08T14:59:35,656   Preparing metadata (setup.py): finished with status 'done'
2023-09-08T14:59:35,660   Source in /tmp/pip-wheel-gumt31n7/openbabel_e6a83dab477b4cd8b5f169b9dba7a69e has version 1.8.1, which satisfies requirement openbabel==1.8.1 from https://files.pythonhosted.org/packages/af/63/976ef92f2eb827b0def52a69f537c9fe27754533e1f98735d167448894b2/openbabel-1.8.1.tar.gz
2023-09-08T14:59:35,661   Removed openbabel==1.8.1 from https://files.pythonhosted.org/packages/af/63/976ef92f2eb827b0def52a69f537c9fe27754533e1f98735d167448894b2/openbabel-1.8.1.tar.gz from build tracker '/tmp/pip-build-tracker-nvthrbyz'
2023-09-08T14:59:35,665 Created temporary directory: /tmp/pip-unpack-7x3mxt07
2023-09-08T14:59:35,666 Created temporary directory: /tmp/pip-unpack-mk1cobe3
2023-09-08T14:59:35,669 Building wheels for collected packages: openbabel
2023-09-08T14:59:35,673   Created temporary directory: /tmp/pip-wheel-nre307i4
2023-09-08T14:59:35,674   Building wheel for openbabel (setup.py): started
2023-09-08T14:59:35,675   Destination directory: /tmp/pip-wheel-nre307i4
2023-09-08T14:59:35,675   Running command python setup.py bdist_wheel
2023-09-08T14:59:36,660   running bdist_wheel
2023-09-08T14:59:36,708   running build
2023-09-08T14:59:36,709   running build_ext
2023-09-08T14:59:36,795   Warning: package openbabel-2.0 could not be found by pkg-config.
2023-09-08T14:59:36,796   Guessing Open Babel location:
2023-09-08T14:59:36,796   - include_dirs: /usr/local/include/openbabel-2.0
2023-09-08T14:59:36,797   - library_dirs: /usr/local/lib
2023-09-08T14:59:37,304   building '_openbabel' extension
2023-09-08T14:59:37,305   swigging openbabel-python.i to openbabel-python_wrap.cpp
2023-09-08T14:59:37,306   swig -python -c++ -small -O -templatereduce -naturalvar -I/usr/local/include/openbabel-2.0 -I/usr/include/python3.11 -o openbabel-python_wrap.cpp openbabel-python.i
2023-09-08T14:59:37,829   openbabel-python.i:221: Error: Unable to find 'openbabel/babelconfig.h'
2023-09-08T14:59:37,830   openbabel-python.i:223: Error: Unable to find 'openbabel/data.h'
2023-09-08T14:59:37,830   openbabel-python.i:224: Error: Unable to find 'openbabel/rand.h'
2023-09-08T14:59:37,831   openbabel-python.i:225: Error: Unable to find 'openbabel/obutil.h'
2023-09-08T14:59:37,831   openbabel-python.i:226: Error: Unable to find 'openbabel/math/vector3.h'
2023-09-08T14:59:37,832   openbabel-python.i:228: Error: Unable to find 'openbabel/math/matrix3x3.h'
2023-09-08T14:59:37,832   openbabel-python.i:229: Error: Unable to find 'openbabel/math/transform3d.h'
2023-09-08T14:59:37,833   openbabel-python.i:230: Error: Unable to find 'openbabel/math/spacegroup.h'
2023-09-08T14:59:37,833   openbabel-python.i:232: Error: Unknown SWIG preprocessor directive: CloneData (if this is a block of target language code, delimit it with %{ and %})
2023-09-08T14:59:37,834   openbabel-python.i:234: Error: Unable to find 'openbabel/base.h'
2023-09-08T14:59:37,834   openbabel-python.i:236: Error: Unable to find 'openbabel/generic.h'
2023-09-08T14:59:37,835   openbabel-python.i:237: Error: Unable to find 'openbabel/griddata.h'
2023-09-08T14:59:37,835   openbabel-python.i:239: Error: Unable to find 'openbabel/chains.h'
2023-09-08T14:59:37,836   openbabel-python.i:240: Error: Unable to find 'openbabel/typer.h'
2023-09-08T14:59:37,837   openbabel-python.i:248: Error: Unable to find 'openbabel/plugin.h'
2023-09-08T14:59:37,837   openbabel-python.i:253: Error: Unable to find 'openbabel/oberror.h'
2023-09-08T14:59:37,838   openbabel-python.i:254: Error: Unable to find 'openbabel/format.h'
2023-09-08T14:59:37,838   openbabel-python.i:255: Error: Unable to find 'openbabel/obconversion.h'
2023-09-08T14:59:37,839   openbabel-python.i:256: Error: Unable to find 'openbabel/residue.h'
2023-09-08T14:59:37,839   openbabel-python.i:257: Error: Unable to find 'openbabel/internalcoord.h'
2023-09-08T14:59:37,840   openbabel-python.i:258: Error: Unable to find 'openbabel/atom.h'
2023-09-08T14:59:37,840   openbabel-python.i:259: Error: Unable to find 'openbabel/bond.h'
2023-09-08T14:59:37,841   openbabel-python.i:260: Error: Unable to find 'openbabel/reaction.h'
2023-09-08T14:59:37,841   openbabel-python.i:278: Error: Unable to find 'openbabel/mol.h'
2023-09-08T14:59:37,841   openbabel-python.i:285: Error: Unable to find 'openbabel/ring.h'
2023-09-08T14:59:37,842   openbabel-python.i:286: Error: Unable to find 'openbabel/parsmart.h'
2023-09-08T14:59:37,842   openbabel-python.i:287: Error: Unable to find 'openbabel/alias.h'
2023-09-08T14:59:37,843   openbabel-python.i:288: Error: Unable to find 'openbabel/atomclass.h'
2023-09-08T14:59:37,843   openbabel-python.i:290: Error: Unable to find 'openbabel/fingerprint.h'
2023-09-08T14:59:37,843   openbabel-python.i:292: Error: Unable to find 'openbabel/descriptor.h'
2023-09-08T14:59:37,844   openbabel-python.i:294: Error: Unknown SWIG preprocessor directive: Ignore (if this is a block of target language code, delimit it with %{ and %})
2023-09-08T14:59:37,844   openbabel-python.i:297: Error: Unable to find 'openbabel/forcefield.h'
2023-09-08T14:59:37,845   openbabel-python.i:299: Error: Unable to find 'openbabel/builder.h'
2023-09-08T14:59:37,845   openbabel-python.i:300: Error: Unable to find 'openbabel/op.h'
2023-09-08T14:59:37,846   openbabel-python.i:302: Error: Unable to find 'openbabel/chargemodel.h'
2023-09-08T14:59:37,846   openbabel-python.i:305: Error: Unable to find 'openbabel/phmodel.h'
2023-09-08T14:59:37,847   openbabel-python.i:306: Error: Unable to find 'openbabel/graphsym.h'
2023-09-08T14:59:37,848   openbabel-python.i:307: Error: Unable to find 'openbabel/isomorphism.h'
2023-09-08T14:59:37,849   openbabel-python.i:308: Error: Unable to find 'openbabel/query.h'
2023-09-08T14:59:37,850   openbabel-python.i:309: Error: Unable to find 'openbabel/canon.h'
2023-09-08T14:59:37,851   openbabel-python.i:311: Error: Unable to find 'openbabel/stereo/stereo.h'
2023-09-08T14:59:37,852   openbabel-python.i:314: Error: Unable to find 'openbabel/bitvec.h'
2023-09-08T14:59:37,852   openbabel-python.i:315: Error: Unknown SWIG preprocessor directive: Ignore (if this is a block of target language code, delimit it with %{ and %})
2023-09-08T14:59:37,853   openbabel-python.i:317: Error: Unable to find 'openbabel/rotor.h'
2023-09-08T14:59:37,854   openbabel-python.i:319: Error: Unable to find 'openbabel/rotamer.h'
2023-09-08T14:59:37,855   openbabel-python.i:320: Error: Unable to find 'openbabel/spectrophore.h'
2023-09-08T14:59:37,856   openbabel-python.i:326: Error: Unknown SWIG preprocessor directive: The (if this is a block of target language code, delimit it with %{ and %})
2023-09-08T14:59:37,857   openbabel-python.i:327: Error: Unknown SWIG preprocessor directive: This (if this is a block of target language code, delimit it with %{ and %})
2023-09-08T14:59:37,858   openbabel-python.i:328: Error: Unknown SWIG preprocessor directive: the (if this is a block of target language code, delimit it with %{ and %})
2023-09-08T14:59:37,858   openbabel-python.i:329: Error: Unknown SWIG preprocessor directive: the (if this is a block of target language code, delimit it with %{ and %})
2023-09-08T14:59:37,859   openbabel-python.i:330: Error: Unknown SWIG preprocessor directive: This (if this is a block of target language code, delimit it with %{ and %})
2023-09-08T14:59:37,860   openbabel-python.i:331: Error: Unknown SWIG preprocessor directive: pointers (if this is a block of target language code, delimit it with %{ and %})
2023-09-08T14:59:37,861   openbabel-python.i:332: Error: Unknown SWIG preprocessor directive: OBAtomIter (if this is a block of target language code, delimit it with %{ and %})
2023-09-08T14:59:37,862   openbabel-python.i:351: Error: Unknown SWIG preprocessor directive: These (if this is a block of target language code, delimit it with %{ and %})
2023-09-08T14:59:37,863   openbabel-python.i:352: Error: Unknown SWIG preprocessor directive: classes (if this is a block of target language code, delimit it with %{ and %})
2023-09-08T14:59:37,863   openbabel-python.i:370: Error: Unable to find 'openbabel/obiter.h'
2023-09-08T14:59:37,864   openbabel-python.i:372: Error: Unknown SWIG preprocessor directive: The (if this is a block of target language code, delimit it with %{ and %})
2023-09-08T14:59:37,865   openbabel-python.i:373: Error: Unknown SWIG preprocessor directive: equivalent (if this is a block of target language code, delimit it with %{ and %})
2023-09-08T14:59:37,865   openbabel-python.i:463: Error: Unknown SWIG preprocessor directive: Copy (if this is a block of target language code, delimit it with %{ and %})
2023-09-08T14:59:37,866   openbabel-python.i:474: Error: Unknown SWIG preprocessor directive: Functions (if this is a block of target language code, delimit it with %{ and %})
2023-09-08T14:59:37,867   stereo.i:1: Error: Unable to find 'openbabel/stereo/tetranonplanar.h'
2023-09-08T14:59:37,867   stereo.i:2: Error: Unable to find 'openbabel/stereo/tetraplanar.h'
2023-09-08T14:59:37,868   stereo.i:3: Error: Unable to find 'openbabel/stereo/tetrahedral.h'
2023-09-08T14:59:37,868   stereo.i:4: Error: Unable to find 'openbabel/stereo/cistrans.h'
2023-09-08T14:59:37,869   stereo.i:5: Error: Unable to find 'openbabel/stereo/squareplanar.h'
2023-09-08T14:59:37,870   stereo.i:6: Error: Unable to find 'openbabel/stereo/bindings.h'

2023-09-08T14:59:37,871   Error: SWIG failed. Is Open Babel installed?
2023-09-08T14:59:37,872   You may need to manually specify the location of Open Babel include and library directories. For example:
2023-09-08T14:59:37,872     python setup.py build_ext -I/usr/local/include/openbabel-2.0 -L/usr/local/lib
2023-09-08T14:59:37,873     python setup.py install
2023-09-08T14:59:37,997   ERROR: [present-rich] python setup.py bdist_wheel exited with 1
2023-09-08T14:59:38,010   [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c '
2023-09-08T14:59:38,010   exec(compile('"'"''"'"''"'"'
2023-09-08T14:59:38,010   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-08T14:59:38,010   #
2023-09-08T14:59:38,010   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-08T14:59:38,010   #   import from `distutils.core` to work with newer packaging standards.
2023-09-08T14:59:38,010   # - It provides a clear error message when setuptools is not installed.
2023-09-08T14:59:38,010   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-08T14:59:38,010   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-08T14:59:38,010   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-08T14:59:38,010   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-08T14:59:38,010   import os, sys, tokenize
2023-09-08T14:59:38,010   
2023-09-08T14:59:38,010   try:
2023-09-08T14:59:38,010       import setuptools
2023-09-08T14:59:38,010   except ImportError as error:
2023-09-08T14:59:38,010       print(
2023-09-08T14:59:38,010           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-08T14:59:38,010           "the build environment.",
2023-09-08T14:59:38,010           file=sys.stderr,
2023-09-08T14:59:38,010       )
2023-09-08T14:59:38,010       sys.exit(1)
2023-09-08T14:59:38,010   
2023-09-08T14:59:38,010   __file__ = %r
2023-09-08T14:59:38,010   sys.argv[0] = __file__
2023-09-08T14:59:38,010   
2023-09-08T14:59:38,010   if os.path.exists(__file__):
2023-09-08T14:59:38,010       filename = __file__
2023-09-08T14:59:38,010       with tokenize.open(__file__) as f:
2023-09-08T14:59:38,010           setup_py_code = f.read()
2023-09-08T14:59:38,010   else:
2023-09-08T14:59:38,010       filename = "<auto-generated setuptools caller>"
2023-09-08T14:59:38,010       setup_py_code = "from setuptools import setup; setup()"
2023-09-08T14:59:38,010   
2023-09-08T14:59:38,010   exec(compile(setup_py_code, filename, "exec"))
2023-09-08T14:59:38,010   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-gumt31n7/openbabel_e6a83dab477b4cd8b5f169b9dba7a69e/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' bdist_wheel -d /tmp/pip-wheel-nre307i4[/]
2023-09-08T14:59:38,010   [bold magenta]cwd[/]: /tmp/pip-wheel-gumt31n7/openbabel_e6a83dab477b4cd8b5f169b9dba7a69e/
2023-09-08T14:59:38,011   Building wheel for openbabel (setup.py): finished with status 'error'
2023-09-08T14:59:38,012   ERROR: Failed building wheel for openbabel
2023-09-08T14:59:38,014   Running setup.py clean for openbabel
2023-09-08T14:59:38,015   Running command python setup.py clean
2023-09-08T14:59:39,220   running clean
2023-09-08T14:59:39,243   'build/lib.linux-armv7l-cpython-311' does not exist -- can't clean it
2023-09-08T14:59:39,243   'build/bdist.linux-armv7l' does not exist -- can't clean it
2023-09-08T14:59:39,244   'build/scripts-3.11' does not exist -- can't clean it
2023-09-08T14:59:39,353 Failed to build openbabel
2023-09-08T14:59:39,354 ERROR: Failed to build one or more wheels
2023-09-08T14:59:39,355 Exception information:
2023-09-08T14:59:39,355 Traceback (most recent call last):
2023-09-08T14:59:39,355   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-08T14:59:39,355     status = run_func(*args)
2023-09-08T14:59:39,355              ^^^^^^^^^^^^^^^
2023-09-08T14:59:39,355   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-08T14:59:39,355     return func(self, options, args)
2023-09-08T14:59:39,355            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T14:59:39,355   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 181, in run
2023-09-08T14:59:39,355     raise CommandError("Failed to build one or more wheels")
2023-09-08T14:59:39,355 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2023-09-08T14:59:39,358 Removed build tracker: '/tmp/pip-build-tracker-nvthrbyz'