2023-09-08T15:59:31,837 Created temporary directory: /tmp/pip-build-tracker-43vv50s6
2023-09-08T15:59:31,839 Initialized build tracking at /tmp/pip-build-tracker-43vv50s6
2023-09-08T15:59:31,839 Created build tracker: /tmp/pip-build-tracker-43vv50s6
2023-09-08T15:59:31,839 Entered build tracker: /tmp/pip-build-tracker-43vv50s6
2023-09-08T15:59:31,840 Created temporary directory: /tmp/pip-wheel-rgm7yiqf
2023-09-08T15:59:31,843 Created temporary directory: /tmp/pip-ephem-wheel-cache-koaxrmz_
2023-09-08T15:59:31,865 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-08T15:59:31,868 2 location(s) to search for versions of molvs:
2023-09-08T15:59:31,868 * https://pypi.org/simple/molvs/
2023-09-08T15:59:31,868 * https://www.piwheels.org/simple/molvs/
2023-09-08T15:59:31,869 Fetching project page and analyzing links: https://pypi.org/simple/molvs/
2023-09-08T15:59:31,870 Getting page https://pypi.org/simple/molvs/
2023-09-08T15:59:31,871 Found index url https://pypi.org/simple/
2023-09-08T15:59:32,083 Fetched page https://pypi.org/simple/molvs/ as application/vnd.pypi.simple.v1+json
2023-09-08T15:59:32,086   Found link https://files.pythonhosted.org/packages/c2/2a/43118c3ad01e60a5629ce18544cb3187f43cda6498394aab3bea4141d869/MolVS-0.0.1.tar.gz (from https://pypi.org/simple/molvs/), version: 0.0.1
2023-09-08T15:59:32,087   Found link https://files.pythonhosted.org/packages/be/bd/f3cdb135e4ab97e71a0cb0a0176ca4e717fea6adbfe399fb8881601f76df/MolVS-0.0.2.tar.gz (from https://pypi.org/simple/molvs/), version: 0.0.2
2023-09-08T15:59:32,087   Found link https://files.pythonhosted.org/packages/a5/a7/cc06afbdd709c8c24349cd94f8b50dd9ddf826757506771e1164f05a1433/MolVS-0.0.3.tar.gz (from https://pypi.org/simple/molvs/), version: 0.0.3
2023-09-08T15:59:32,088   Found link https://files.pythonhosted.org/packages/fc/ed/080ef596d4d6c73208b67ade04f6bc2e69da3b44301eacff41b48109191a/MolVS-0.0.4.tar.gz (from https://pypi.org/simple/molvs/), version: 0.0.4
2023-09-08T15:59:32,089   Found link https://files.pythonhosted.org/packages/c2/4e/6fcc28c733ddb669f3e15502477fd5bbbfa7ebd0fc93dd23b9d8ec8b316a/MolVS-0.0.5.tar.gz (from https://pypi.org/simple/molvs/), version: 0.0.5
2023-09-08T15:59:32,089   Found link https://files.pythonhosted.org/packages/3c/f0/8f43beb4ae8c3b7cbb95bd4b4f3e34dcbd25d7b525c5dbe37aa67af02ab3/MolVS-0.0.7.tar.gz (from https://pypi.org/simple/molvs/), version: 0.0.7
2023-09-08T15:59:32,090   Found link https://files.pythonhosted.org/packages/35/7b/914143629a24092d0e3b6b07b7f5a22d9e3e6e77fece9e2f66321e9e0ce4/MolVS-0.0.8.tar.gz (from https://pypi.org/simple/molvs/), version: 0.0.8
2023-09-08T15:59:32,091   Found link https://files.pythonhosted.org/packages/dd/64/550a35aed0c3c6e49ca762d9ac59a1a38db4e07b2b916d0820d1ca29ec9f/MolVS-0.0.9.tar.gz (from https://pypi.org/simple/molvs/), version: 0.0.9
2023-09-08T15:59:32,091   Found link https://files.pythonhosted.org/packages/fe/3c/14bdb547eaedab7b958a76f639ecb9a14e9786c1176344348c1e239deadc/MolVS-0.1.0.tar.gz (from https://pypi.org/simple/molvs/), version: 0.1.0
2023-09-08T15:59:32,092   Found link https://files.pythonhosted.org/packages/08/dc/d948e83b97f2c420cb6c7e2143ae349560d3b5b061945f1b2a4eefb0231c/MolVS-0.1.1.tar.gz (from https://pypi.org/simple/molvs/), version: 0.1.1
2023-09-08T15:59:32,093 Fetching project page and analyzing links: https://www.piwheels.org/simple/molvs/
2023-09-08T15:59:32,093 Getting page https://www.piwheels.org/simple/molvs/
2023-09-08T15:59:32,095 Found index url https://www.piwheels.org/simple/
2023-09-08T15:59:32,372 Fetched page https://www.piwheels.org/simple/molvs/ as text/html
2023-09-08T15:59:32,375   Skipping link: No binaries permitted for molvs: https://www.piwheels.org/simple/molvs/MolVS-0.0.2-py3-none-any.whl#sha256=70221bd36a8f23e451ae90ae942602fe528dae371cc9d382f307b95e6d4bbe5b (from https://www.piwheels.org/simple/molvs/)
2023-09-08T15:59:32,376   Skipping link: No binaries permitted for molvs: https://www.piwheels.org/simple/molvs/MolVS-0.0.3-py3-none-any.whl#sha256=cd24985e1977ec68535f18cb9b853ffbc43433c8a9aefb00f815cb480a728e70 (from https://www.piwheels.org/simple/molvs/)
2023-09-08T15:59:32,377   Skipping link: No binaries permitted for molvs: https://www.piwheels.org/simple/molvs/MolVS-0.0.4-py3-none-any.whl#sha256=4eb8733d8fded0064470361c4b1accfe821aa315cf443b50c4ee9419774894a9 (from https://www.piwheels.org/simple/molvs/)
2023-09-08T15:59:32,378   Skipping link: No binaries permitted for molvs: https://www.piwheels.org/simple/molvs/MolVS-0.0.5-py3-none-any.whl#sha256=3cd49b0cad18dea65267b5a331841970d5aa33f3230282586a7791c98204ed2c (from https://www.piwheels.org/simple/molvs/)
2023-09-08T15:59:32,378   Skipping link: No binaries permitted for molvs: https://www.piwheels.org/simple/molvs/MolVS-0.0.7-py3-none-any.whl#sha256=5182b2acc6549d922eead002605e341f5071aa0563acad333ae3b4eb524ae522 (from https://www.piwheels.org/simple/molvs/)
2023-09-08T15:59:32,379   Skipping link: No binaries permitted for molvs: https://www.piwheels.org/simple/molvs/MolVS-0.0.8-py3-none-any.whl#sha256=f7c4d275b7940446a459d4b7de60886275123d9976995365be53285d3fe2e536 (from https://www.piwheels.org/simple/molvs/)
2023-09-08T15:59:32,379   Skipping link: No binaries permitted for molvs: https://www.piwheels.org/simple/molvs/MolVS-0.0.9-py3-none-any.whl#sha256=6c462b8e6c14f68c4d65dd3a97357d4ded9d5b7f23eaecd1df9cd8f205668aca (from https://www.piwheels.org/simple/molvs/)
2023-09-08T15:59:32,380   Skipping link: No binaries permitted for molvs: https://www.piwheels.org/simple/molvs/MolVS-0.1.0-py3-none-any.whl#sha256=318cdfbc0df3323c7a830190d8c88e655fbbda60f93556bf79b4bedfa73c1b82 (from https://www.piwheels.org/simple/molvs/)
2023-09-08T15:59:32,380   Skipping link: No binaries permitted for molvs: https://www.piwheels.org/simple/molvs/MolVS-0.1.1-py3-none-any.whl#sha256=fc36dadab51c833f6f384cba2eae7604b2a495dac37bb372619d8cbf4501f093 (from https://www.piwheels.org/simple/molvs/)
2023-09-08T15:59:32,381 Skipping link: not a file: https://www.piwheels.org/simple/molvs/
2023-09-08T15:59:32,381 Skipping link: not a file: https://pypi.org/simple/molvs/
2023-09-08T15:59:32,400 Given no hashes to check 1 links for project 'molvs': discarding no candidates
2023-09-08T15:59:32,418 Collecting molvs==0.0.1
2023-09-08T15:59:32,421   Created temporary directory: /tmp/pip-unpack-pcy1tccc
2023-09-08T15:59:32,631   Downloading MolVS-0.0.1.tar.gz (18 kB)
2023-09-08T15:59:32,679   Added molvs==0.0.1 from https://files.pythonhosted.org/packages/c2/2a/43118c3ad01e60a5629ce18544cb3187f43cda6498394aab3bea4141d869/MolVS-0.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-43vv50s6'
2023-09-08T15:59:32,680   Running setup.py (path:/tmp/pip-wheel-rgm7yiqf/molvs_750d3457bc2a4b3fbe985d062e19cc2e/setup.py) egg_info for package molvs
2023-09-08T15:59:32,681   Created temporary directory: /tmp/pip-pip-egg-info-7k2srwqs
2023-09-08T15:59:32,682   Preparing metadata (setup.py): started
2023-09-08T15:59:32,683   Running command python setup.py egg_info
2023-09-08T15:59:33,133   Traceback (most recent call last):
2023-09-08T15:59:33,133     File "<string>", line 2, in <module>
2023-09-08T15:59:33,134     File "<pip-setuptools-caller>", line 34, in <module>
2023-09-08T15:59:33,134     File "/tmp/pip-wheel-rgm7yiqf/molvs_750d3457bc2a4b3fbe985d062e19cc2e/setup.py", line 7, in <module>
2023-09-08T15:59:33,135       import molvs
2023-09-08T15:59:33,136     File "/tmp/pip-wheel-rgm7yiqf/molvs_750d3457bc2a4b3fbe985d062e19cc2e/molvs/__init__.py", line 26, in <module>
2023-09-08T15:59:33,137       from .standardize import Standardizer, standardize_smiles
2023-09-08T15:59:33,138     File "/tmp/pip-wheel-rgm7yiqf/molvs_750d3457bc2a4b3fbe985d062e19cc2e/molvs/standardize.py", line 19, in <module>
2023-09-08T15:59:33,139       from rdkit import Chem
2023-09-08T15:59:33,140   ModuleNotFoundError: No module named 'rdkit'
2023-09-08T15:59:33,207   ERROR: [present-rich] python setup.py egg_info exited with 1
2023-09-08T15:59:33,220   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2023-09-08T15:59:33,220   exec(compile('"'"''"'"''"'"'
2023-09-08T15:59:33,220   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-08T15:59:33,220   #
2023-09-08T15:59:33,220   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-08T15:59:33,220   #   import from `distutils.core` to work with newer packaging standards.
2023-09-08T15:59:33,220   # - It provides a clear error message when setuptools is not installed.
2023-09-08T15:59:33,220   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-08T15:59:33,220   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-08T15:59:33,220   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-08T15:59:33,220   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-08T15:59:33,220   import os, sys, tokenize
2023-09-08T15:59:33,220   
2023-09-08T15:59:33,220   try:
2023-09-08T15:59:33,220       import setuptools
2023-09-08T15:59:33,220   except ImportError as error:
2023-09-08T15:59:33,220       print(
2023-09-08T15:59:33,220           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-08T15:59:33,220           "the build environment.",
2023-09-08T15:59:33,220           file=sys.stderr,
2023-09-08T15:59:33,220       )
2023-09-08T15:59:33,220       sys.exit(1)
2023-09-08T15:59:33,220   
2023-09-08T15:59:33,220   __file__ = %r
2023-09-08T15:59:33,220   sys.argv[0] = __file__
2023-09-08T15:59:33,220   
2023-09-08T15:59:33,220   if os.path.exists(__file__):
2023-09-08T15:59:33,220       filename = __file__
2023-09-08T15:59:33,220       with tokenize.open(__file__) as f:
2023-09-08T15:59:33,220           setup_py_code = f.read()
2023-09-08T15:59:33,220   else:
2023-09-08T15:59:33,220       filename = "<auto-generated setuptools caller>"
2023-09-08T15:59:33,220       setup_py_code = "from setuptools import setup; setup()"
2023-09-08T15:59:33,220   
2023-09-08T15:59:33,220   exec(compile(setup_py_code, filename, "exec"))
2023-09-08T15:59:33,220   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-rgm7yiqf/molvs_750d3457bc2a4b3fbe985d062e19cc2e/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-7k2srwqs[/]
2023-09-08T15:59:33,220   [bold magenta]cwd[/]: /tmp/pip-wheel-rgm7yiqf/molvs_750d3457bc2a4b3fbe985d062e19cc2e/
2023-09-08T15:59:33,221   Preparing metadata (setup.py): finished with status 'error'
2023-09-08T15:59:33,223 ERROR: [present-rich] metadata generation failed
2023-09-08T15:59:33,228 Exception information:
2023-09-08T15:59:33,228 Traceback (most recent call last):
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2023-09-08T15:59:33,228     call_subprocess(
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2023-09-08T15:59:33,228     raise error
2023-09-08T15:59:33,228 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2023-09-08T15:59:33,228 
2023-09-08T15:59:33,228 The above exception was the direct cause of the following exception:
2023-09-08T15:59:33,228 
2023-09-08T15:59:33,228 Traceback (most recent call last):
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-08T15:59:33,228     status = run_func(*args)
2023-09-08T15:59:33,228              ^^^^^^^^^^^^^^^
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-08T15:59:33,228     return func(self, options, args)
2023-09-08T15:59:33,228            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2023-09-08T15:59:33,228     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2023-09-08T15:59:33,228                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve
2023-09-08T15:59:33,228     result = self._result = resolver.resolve(
2023-09-08T15:59:33,228                             ^^^^^^^^^^^^^^^^^
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2023-09-08T15:59:33,228     state = resolution.resolve(requirements, max_rounds=max_rounds)
2023-09-08T15:59:33,228             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2023-09-08T15:59:33,228     self._add_to_criteria(self.state.criteria, r, parent=None)
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2023-09-08T15:59:33,228     if not criterion.candidates:
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2023-09-08T15:59:33,228     return bool(self._sequence)
2023-09-08T15:59:33,228            ^^^^^^^^^^^^^^^^^^^^
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2023-09-08T15:59:33,228     return any(self)
2023-09-08T15:59:33,228            ^^^^^^^^^
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2023-09-08T15:59:33,228     return (c for c in iterator if id(c) not in self._incompatible_ids)
2023-09-08T15:59:33,228            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2023-09-08T15:59:33,228     candidate = func()
2023-09-08T15:59:33,228                 ^^^^^^
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link
2023-09-08T15:59:33,228     self._link_candidate_cache[link] = LinkCandidate(
2023-09-08T15:59:33,228                                        ^^^^^^^^^^^^^^
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__
2023-09-08T15:59:33,228     super().__init__(
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
2023-09-08T15:59:33,228     self.dist = self._prepare()
2023-09-08T15:59:33,228                 ^^^^^^^^^^^^^^^
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare
2023-09-08T15:59:33,228     dist = self._prepare_distribution()
2023-09-08T15:59:33,228            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution
2023-09-08T15:59:33,228     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2023-09-08T15:59:33,228            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement
2023-09-08T15:59:33,228     return self._prepare_linked_requirement(req, parallel_builds)
2023-09-08T15:59:33,228            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement
2023-09-08T15:59:33,228     dist = _get_prepared_distribution(
2023-09-08T15:59:33,228            ^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution
2023-09-08T15:59:33,228     abstract_dist.prepare_distribution_metadata(
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata
2023-09-08T15:59:33,228     self.req.prepare_metadata()
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata
2023-09-08T15:59:33,228     self.metadata_directory = generate_metadata_legacy(
2023-09-08T15:59:33,228                               ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T15:59:33,228   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2023-09-08T15:59:33,228     raise MetadataGenerationFailed(package_details=details) from error
2023-09-08T15:59:33,228 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2023-09-08T15:59:33,240 Removed molvs==0.0.1 from https://files.pythonhosted.org/packages/c2/2a/43118c3ad01e60a5629ce18544cb3187f43cda6498394aab3bea4141d869/MolVS-0.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-43vv50s6'
2023-09-08T15:59:33,241 Removed build tracker: '/tmp/pip-build-tracker-43vv50s6'