2023-09-08T18:14:52,865 Created temporary directory: /tmp/pip-build-tracker-hluwtd0s
2023-09-08T18:14:52,866 Initialized build tracking at /tmp/pip-build-tracker-hluwtd0s
2023-09-08T18:14:52,866 Created build tracker: /tmp/pip-build-tracker-hluwtd0s
2023-09-08T18:14:52,867 Entered build tracker: /tmp/pip-build-tracker-hluwtd0s
2023-09-08T18:14:52,867 Created temporary directory: /tmp/pip-wheel-r25ro6o7
2023-09-08T18:14:52,870 Created temporary directory: /tmp/pip-ephem-wheel-cache-0wadw16d
2023-09-08T18:14:52,892 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-08T18:14:52,896 2 location(s) to search for versions of hmmerclust:
2023-09-08T18:14:52,896 * https://pypi.org/simple/hmmerclust/
2023-09-08T18:14:52,896 * https://www.piwheels.org/simple/hmmerclust/
2023-09-08T18:14:52,896 Fetching project page and analyzing links: https://pypi.org/simple/hmmerclust/
2023-09-08T18:14:52,898 Getting page https://pypi.org/simple/hmmerclust/
2023-09-08T18:14:52,899 Found index url https://pypi.org/simple/
2023-09-08T18:14:53,037 Fetched page https://pypi.org/simple/hmmerclust/ as application/vnd.pypi.simple.v1+json
2023-09-08T18:14:53,040   Skipping link: No binaries permitted for hmmerclust: https://files.pythonhosted.org/packages/ba/2f/ae7fcf49d1468169d403ae7d47a010cbda4436edf3afdf6fdbe466018084/hmmerclust-0.0.1.dev1-py2-none-any.whl (from https://pypi.org/simple/hmmerclust/)
2023-09-08T18:14:53,040   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/7e/0f/25c384bee231991a77a341306dd28e2f0a12c1624de4f444406a5be189a0/hmmerclust-0.0.1.dev1-py2.7.egg (from https://pypi.org/simple/hmmerclust/)
2023-09-08T18:14:53,041   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/53/2c/a31e72a55345ac93ba1312302471efbdbd20e3dcf9cdf4d5b53a835409e3/hmmerclust-0.0.1.dev1-py3.4.egg (from https://pypi.org/simple/hmmerclust/)
2023-09-08T18:14:53,041   Found link https://files.pythonhosted.org/packages/df/69/20c573547efd11889053faec843babce75f4c3df39ec41b8dcdb15920cbf/hmmerclust-0.0.1.dev1.tar.gz (from https://pypi.org/simple/hmmerclust/), version: 0.0.1.dev1
2023-09-08T18:14:53,042   Skipping link: No binaries permitted for hmmerclust: https://files.pythonhosted.org/packages/5d/a1/b75c014ee8eb713b6472672c37dc1fc57bbc62b77d56ba2d578fc36422b1/hmmerclust-0.0.1.dev2-py2-none-any.whl (from https://pypi.org/simple/hmmerclust/)
2023-09-08T18:14:53,042   Found link https://files.pythonhosted.org/packages/79/46/cb88bae3df53fd222674c3a19d9981ff60918db20e2ff89fe24e12d791e4/hmmerclust-0.0.1.dev2.tar.gz (from https://pypi.org/simple/hmmerclust/), version: 0.0.1.dev2
2023-09-08T18:14:53,043   Skipping link: No binaries permitted for hmmerclust: https://files.pythonhosted.org/packages/88/10/82806f96a22347bd8de1226f016c369c8225f74278b810445409f047266a/hmmerclust-0.0.1.dev3-py2-none-any.whl (from https://pypi.org/simple/hmmerclust/)
2023-09-08T18:14:53,044   Found link https://files.pythonhosted.org/packages/5c/5d/47dc4e03b1ae405dc8a3d8637d1f47627b3e04a33f74da5303f5f4547431/hmmerclust-0.0.1.dev3.tar.gz (from https://pypi.org/simple/hmmerclust/), version: 0.0.1.dev3
2023-09-08T18:14:53,044   Skipping link: No binaries permitted for hmmerclust: https://files.pythonhosted.org/packages/66/87/7bea32389c9972060d8126499869f560ed3373299431b15154268dc125cd/hmmerclust-0.0.1.dev4-py2-none-any.whl (from https://pypi.org/simple/hmmerclust/)
2023-09-08T18:14:53,045   Found link https://files.pythonhosted.org/packages/19/58/01ee64c989c48313d83d3e7708fda60ad54b13e267c06d885b31330480b4/hmmerclust-0.0.1.dev4.tar.gz (from https://pypi.org/simple/hmmerclust/), version: 0.0.1.dev4
2023-09-08T18:14:53,045   Skipping link: No binaries permitted for hmmerclust: https://files.pythonhosted.org/packages/23/95/328295fd6f72a5906725da18f0481f5ab466625b8b04a570352af157447e/hmmerclust-0.0.1.dev5-py2-none-any.whl (from https://pypi.org/simple/hmmerclust/)
2023-09-08T18:14:53,046   Found link https://files.pythonhosted.org/packages/09/04/23a8aca6d4b3eaf66d007aa89d0695a7f1f4033bfbc1c4b8bbc3141224a8/hmmerclust-0.0.1.dev5.tar.gz (from https://pypi.org/simple/hmmerclust/), version: 0.0.1.dev5
2023-09-08T18:14:53,047 Fetching project page and analyzing links: https://www.piwheels.org/simple/hmmerclust/
2023-09-08T18:14:53,048 Getting page https://www.piwheels.org/simple/hmmerclust/
2023-09-08T18:14:53,049 Found index url https://www.piwheels.org/simple/
2023-09-08T18:14:53,300 Fetched page https://www.piwheels.org/simple/hmmerclust/ as text/html
2023-09-08T18:14:53,301 Skipping link: not a file: https://www.piwheels.org/simple/hmmerclust/
2023-09-08T18:14:53,301 Skipping link: not a file: https://pypi.org/simple/hmmerclust/
2023-09-08T18:14:53,320 Given no hashes to check 1 links for project 'hmmerclust': discarding no candidates
2023-09-08T18:14:53,338 Collecting hmmerclust==0.0.1.dev3
2023-09-08T18:14:53,340   Created temporary directory: /tmp/pip-unpack-5f5w9p9q
2023-09-08T18:14:53,922   Downloading hmmerclust-0.0.1.dev3.tar.gz (11 kB)
2023-09-08T18:14:53,951   Added hmmerclust==0.0.1.dev3 from https://files.pythonhosted.org/packages/5c/5d/47dc4e03b1ae405dc8a3d8637d1f47627b3e04a33f74da5303f5f4547431/hmmerclust-0.0.1.dev3.tar.gz to build tracker '/tmp/pip-build-tracker-hluwtd0s'
2023-09-08T18:14:53,953   Running setup.py (path:/tmp/pip-wheel-r25ro6o7/hmmerclust_2819ef69a5244ff29d4684581e7b258f/setup.py) egg_info for package hmmerclust
2023-09-08T18:14:53,954   Created temporary directory: /tmp/pip-pip-egg-info-lxkn_nja
2023-09-08T18:14:53,954   Preparing metadata (setup.py): started
2023-09-08T18:14:53,955   Running command python setup.py egg_info
2023-09-08T18:14:54,387   Traceback (most recent call last):
2023-09-08T18:14:54,387     File "<string>", line 2, in <module>
2023-09-08T18:14:54,388     File "<pip-setuptools-caller>", line 34, in <module>
2023-09-08T18:14:54,389     File "/tmp/pip-wheel-r25ro6o7/hmmerclust_2819ef69a5244ff29d4684581e7b258f/setup.py", line 16, in <module>
2023-09-08T18:14:54,390       with open(path.join(here, 'DESCRIPTION.rst'), encoding='utf-8') as f:
2023-09-08T18:14:54,390            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T18:14:54,391     File "<frozen codecs>", line 906, in open
2023-09-08T18:14:54,392   FileNotFoundError: [Errno 2] No such file or directory: '/tmp/pip-wheel-r25ro6o7/hmmerclust_2819ef69a5244ff29d4684581e7b258f/DESCRIPTION.rst'
2023-09-08T18:14:54,458   ERROR: [present-rich] python setup.py egg_info exited with 1
2023-09-08T18:14:54,471   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2023-09-08T18:14:54,471   exec(compile('"'"''"'"''"'"'
2023-09-08T18:14:54,471   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-08T18:14:54,471   #
2023-09-08T18:14:54,471   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-08T18:14:54,471   #   import from `distutils.core` to work with newer packaging standards.
2023-09-08T18:14:54,471   # - It provides a clear error message when setuptools is not installed.
2023-09-08T18:14:54,471   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-08T18:14:54,471   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-08T18:14:54,471   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-08T18:14:54,471   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-08T18:14:54,471   import os, sys, tokenize
2023-09-08T18:14:54,471   
2023-09-08T18:14:54,471   try:
2023-09-08T18:14:54,471       import setuptools
2023-09-08T18:14:54,471   except ImportError as error:
2023-09-08T18:14:54,471       print(
2023-09-08T18:14:54,471           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-08T18:14:54,471           "the build environment.",
2023-09-08T18:14:54,471           file=sys.stderr,
2023-09-08T18:14:54,471       )
2023-09-08T18:14:54,471       sys.exit(1)
2023-09-08T18:14:54,471   
2023-09-08T18:14:54,471   __file__ = %r
2023-09-08T18:14:54,471   sys.argv[0] = __file__
2023-09-08T18:14:54,471   
2023-09-08T18:14:54,471   if os.path.exists(__file__):
2023-09-08T18:14:54,471       filename = __file__
2023-09-08T18:14:54,471       with tokenize.open(__file__) as f:
2023-09-08T18:14:54,471           setup_py_code = f.read()
2023-09-08T18:14:54,471   else:
2023-09-08T18:14:54,471       filename = "<auto-generated setuptools caller>"
2023-09-08T18:14:54,471       setup_py_code = "from setuptools import setup; setup()"
2023-09-08T18:14:54,471   
2023-09-08T18:14:54,471   exec(compile(setup_py_code, filename, "exec"))
2023-09-08T18:14:54,471   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-r25ro6o7/hmmerclust_2819ef69a5244ff29d4684581e7b258f/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-lxkn_nja[/]
2023-09-08T18:14:54,472   [bold magenta]cwd[/]: /tmp/pip-wheel-r25ro6o7/hmmerclust_2819ef69a5244ff29d4684581e7b258f/
2023-09-08T18:14:54,473   Preparing metadata (setup.py): finished with status 'error'
2023-09-08T18:14:54,474 ERROR: [present-rich] metadata generation failed
2023-09-08T18:14:54,480 Exception information:
2023-09-08T18:14:54,480 Traceback (most recent call last):
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2023-09-08T18:14:54,480     call_subprocess(
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2023-09-08T18:14:54,480     raise error
2023-09-08T18:14:54,480 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2023-09-08T18:14:54,480 
2023-09-08T18:14:54,480 The above exception was the direct cause of the following exception:
2023-09-08T18:14:54,480 
2023-09-08T18:14:54,480 Traceback (most recent call last):
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-08T18:14:54,480     status = run_func(*args)
2023-09-08T18:14:54,480              ^^^^^^^^^^^^^^^
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-08T18:14:54,480     return func(self, options, args)
2023-09-08T18:14:54,480            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2023-09-08T18:14:54,480     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2023-09-08T18:14:54,480                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve
2023-09-08T18:14:54,480     result = self._result = resolver.resolve(
2023-09-08T18:14:54,480                             ^^^^^^^^^^^^^^^^^
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2023-09-08T18:14:54,480     state = resolution.resolve(requirements, max_rounds=max_rounds)
2023-09-08T18:14:54,480             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2023-09-08T18:14:54,480     self._add_to_criteria(self.state.criteria, r, parent=None)
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2023-09-08T18:14:54,480     if not criterion.candidates:
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2023-09-08T18:14:54,480     return bool(self._sequence)
2023-09-08T18:14:54,480            ^^^^^^^^^^^^^^^^^^^^
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2023-09-08T18:14:54,480     return any(self)
2023-09-08T18:14:54,480            ^^^^^^^^^
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2023-09-08T18:14:54,480     return (c for c in iterator if id(c) not in self._incompatible_ids)
2023-09-08T18:14:54,480            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2023-09-08T18:14:54,480     candidate = func()
2023-09-08T18:14:54,480                 ^^^^^^
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link
2023-09-08T18:14:54,480     self._link_candidate_cache[link] = LinkCandidate(
2023-09-08T18:14:54,480                                        ^^^^^^^^^^^^^^
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__
2023-09-08T18:14:54,480     super().__init__(
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
2023-09-08T18:14:54,480     self.dist = self._prepare()
2023-09-08T18:14:54,480                 ^^^^^^^^^^^^^^^
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare
2023-09-08T18:14:54,480     dist = self._prepare_distribution()
2023-09-08T18:14:54,480            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution
2023-09-08T18:14:54,480     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2023-09-08T18:14:54,480            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement
2023-09-08T18:14:54,480     return self._prepare_linked_requirement(req, parallel_builds)
2023-09-08T18:14:54,480            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement
2023-09-08T18:14:54,480     dist = _get_prepared_distribution(
2023-09-08T18:14:54,480            ^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution
2023-09-08T18:14:54,480     abstract_dist.prepare_distribution_metadata(
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata
2023-09-08T18:14:54,480     self.req.prepare_metadata()
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata
2023-09-08T18:14:54,480     self.metadata_directory = generate_metadata_legacy(
2023-09-08T18:14:54,480                               ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T18:14:54,480   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2023-09-08T18:14:54,480     raise MetadataGenerationFailed(package_details=details) from error
2023-09-08T18:14:54,480 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2023-09-08T18:14:54,492 Removed hmmerclust==0.0.1.dev3 from https://files.pythonhosted.org/packages/5c/5d/47dc4e03b1ae405dc8a3d8637d1f47627b3e04a33f74da5303f5f4547431/hmmerclust-0.0.1.dev3.tar.gz from build tracker '/tmp/pip-build-tracker-hluwtd0s'
2023-09-08T18:14:54,493 Removed build tracker: '/tmp/pip-build-tracker-hluwtd0s'