2023-09-08T19:54:51,407 Created temporary directory: /tmp/pip-build-tracker-irrlpnkp
2023-09-08T19:54:51,409 Initialized build tracking at /tmp/pip-build-tracker-irrlpnkp
2023-09-08T19:54:51,409 Created build tracker: /tmp/pip-build-tracker-irrlpnkp
2023-09-08T19:54:51,409 Entered build tracker: /tmp/pip-build-tracker-irrlpnkp
2023-09-08T19:54:51,410 Created temporary directory: /tmp/pip-wheel-vk8au8jr
2023-09-08T19:54:51,414 Created temporary directory: /tmp/pip-ephem-wheel-cache-hxahtcwv
2023-09-08T19:54:51,436 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-08T19:54:51,439 2 location(s) to search for versions of hla-genotyper:
2023-09-08T19:54:51,439 * https://pypi.org/simple/hla-genotyper/
2023-09-08T19:54:51,439 * https://www.piwheels.org/simple/hla-genotyper/
2023-09-08T19:54:51,440 Fetching project page and analyzing links: https://pypi.org/simple/hla-genotyper/
2023-09-08T19:54:51,441 Getting page https://pypi.org/simple/hla-genotyper/
2023-09-08T19:54:51,442 Found index url https://pypi.org/simple/
2023-09-08T19:54:51,658 Fetched page https://pypi.org/simple/hla-genotyper/ as application/vnd.pypi.simple.v1+json
2023-09-08T19:54:51,660   Found link https://files.pythonhosted.org/packages/fc/35/392f75f180b59dd207aa08201a6355ef7e499f0193333606c406a7ca7b5b/hla-genotyper-0.3.0b19.tar.gz (from https://pypi.org/simple/hla-genotyper/), version: 0.3.0b19
2023-09-08T19:54:51,661   Found link https://files.pythonhosted.org/packages/2c/2f/d55483a296af676a49a0e6d58454b1467adabb63068ab40bd047d80e44f8/hla-genotyper-0.4.0b1.tar.gz (from https://pypi.org/simple/hla-genotyper/), version: 0.4.0b1
2023-09-08T19:54:51,661   Found link https://files.pythonhosted.org/packages/9e/c4/2c7116c6d87c90e076bf577c72b461b0a6e205a839b4c8c8543a3e488390/hla-genotyper-0.4.1b1.linux-x86_64.tar.gz (from https://pypi.org/simple/hla-genotyper/), version: 0.4.1b1.linux-x86_64
2023-09-08T19:54:51,662   Found link https://files.pythonhosted.org/packages/04/10/442291c9d5b7b83523903dcaf1063d8f52d437c5b17aec9d96aec7c8938a/hla-genotyper-0.4.1b1.tar.gz (from https://pypi.org/simple/hla-genotyper/), version: 0.4.1b1
2023-09-08T19:54:51,663   Found link https://files.pythonhosted.org/packages/25/9d/c8d01a047076cfd2dc539565132df3bca67a368e7e96e811dacb2dced6ea/hla-genotyper-0.4.2b1.tar.gz (from https://pypi.org/simple/hla-genotyper/), version: 0.4.2b1
2023-09-08T19:54:51,664 Fetching project page and analyzing links: https://www.piwheels.org/simple/hla-genotyper/
2023-09-08T19:54:51,665 Getting page https://www.piwheels.org/simple/hla-genotyper/
2023-09-08T19:54:51,666 Found index url https://www.piwheels.org/simple/
2023-09-08T19:54:51,946 Fetched page https://www.piwheels.org/simple/hla-genotyper/ as text/html
2023-09-08T19:54:51,947 Skipping link: not a file: https://www.piwheels.org/simple/hla-genotyper/
2023-09-08T19:54:51,947 Skipping link: not a file: https://pypi.org/simple/hla-genotyper/
2023-09-08T19:54:51,966 Given no hashes to check 1 links for project 'hla-genotyper': discarding no candidates
2023-09-08T19:54:51,984 Collecting hla-genotyper==0.4.0b1
2023-09-08T19:54:51,986   Created temporary directory: /tmp/pip-unpack-7e84lp1m
2023-09-08T19:54:52,835   Downloading hla-genotyper-0.4.0b1.tar.gz (2.7 MB)
2023-09-08T19:54:54,161   Added hla-genotyper==0.4.0b1 from https://files.pythonhosted.org/packages/2c/2f/d55483a296af676a49a0e6d58454b1467adabb63068ab40bd047d80e44f8/hla-genotyper-0.4.0b1.tar.gz to build tracker '/tmp/pip-build-tracker-irrlpnkp'
2023-09-08T19:54:54,163   Running setup.py (path:/tmp/pip-wheel-vk8au8jr/hla-genotyper_2c2e865020264dc6ad0b53f6730bb8b7/setup.py) egg_info for package hla-genotyper
2023-09-08T19:54:54,164   Created temporary directory: /tmp/pip-pip-egg-info-as_r7cau
2023-09-08T19:54:54,164   Preparing metadata (setup.py): started
2023-09-08T19:54:54,166   Running command python setup.py egg_info
2023-09-08T19:54:54,566   Traceback (most recent call last):
2023-09-08T19:54:54,567     File "<string>", line 2, in <module>
2023-09-08T19:54:54,567     File "<pip-setuptools-caller>", line 34, in <module>
2023-09-08T19:54:54,568     File "/tmp/pip-wheel-vk8au8jr/hla-genotyper_2c2e865020264dc6ad0b53f6730bb8b7/setup.py", line 18, in <module>
2023-09-08T19:54:54,570       execfile("hla/version.py")
2023-09-08T19:54:54,570       ^^^^^^^^
2023-09-08T19:54:54,571   NameError: name 'execfile' is not defined
2023-09-08T19:54:54,638   ERROR: [present-rich] python setup.py egg_info exited with 1
2023-09-08T19:54:54,651   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2023-09-08T19:54:54,651   exec(compile('"'"''"'"''"'"'
2023-09-08T19:54:54,651   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-08T19:54:54,651   #
2023-09-08T19:54:54,651   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-08T19:54:54,651   #   import from `distutils.core` to work with newer packaging standards.
2023-09-08T19:54:54,651   # - It provides a clear error message when setuptools is not installed.
2023-09-08T19:54:54,651   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-08T19:54:54,651   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-08T19:54:54,651   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-08T19:54:54,651   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-08T19:54:54,651   import os, sys, tokenize
2023-09-08T19:54:54,651   
2023-09-08T19:54:54,651   try:
2023-09-08T19:54:54,651       import setuptools
2023-09-08T19:54:54,651   except ImportError as error:
2023-09-08T19:54:54,651       print(
2023-09-08T19:54:54,651           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-08T19:54:54,651           "the build environment.",
2023-09-08T19:54:54,651           file=sys.stderr,
2023-09-08T19:54:54,651       )
2023-09-08T19:54:54,651       sys.exit(1)
2023-09-08T19:54:54,651   
2023-09-08T19:54:54,651   __file__ = %r
2023-09-08T19:54:54,651   sys.argv[0] = __file__
2023-09-08T19:54:54,651   
2023-09-08T19:54:54,651   if os.path.exists(__file__):
2023-09-08T19:54:54,651       filename = __file__
2023-09-08T19:54:54,651       with tokenize.open(__file__) as f:
2023-09-08T19:54:54,651           setup_py_code = f.read()
2023-09-08T19:54:54,651   else:
2023-09-08T19:54:54,651       filename = "<auto-generated setuptools caller>"
2023-09-08T19:54:54,651       setup_py_code = "from setuptools import setup; setup()"
2023-09-08T19:54:54,651   
2023-09-08T19:54:54,651   exec(compile(setup_py_code, filename, "exec"))
2023-09-08T19:54:54,651   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-vk8au8jr/hla-genotyper_2c2e865020264dc6ad0b53f6730bb8b7/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-as_r7cau[/]
2023-09-08T19:54:54,651   [bold magenta]cwd[/]: /tmp/pip-wheel-vk8au8jr/hla-genotyper_2c2e865020264dc6ad0b53f6730bb8b7/
2023-09-08T19:54:54,652   Preparing metadata (setup.py): finished with status 'error'
2023-09-08T19:54:54,653 ERROR: [present-rich] metadata generation failed
2023-09-08T19:54:54,659 Exception information:
2023-09-08T19:54:54,659 Traceback (most recent call last):
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2023-09-08T19:54:54,659     call_subprocess(
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2023-09-08T19:54:54,659     raise error
2023-09-08T19:54:54,659 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2023-09-08T19:54:54,659 
2023-09-08T19:54:54,659 The above exception was the direct cause of the following exception:
2023-09-08T19:54:54,659 
2023-09-08T19:54:54,659 Traceback (most recent call last):
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-08T19:54:54,659     status = run_func(*args)
2023-09-08T19:54:54,659              ^^^^^^^^^^^^^^^
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-08T19:54:54,659     return func(self, options, args)
2023-09-08T19:54:54,659            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2023-09-08T19:54:54,659     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2023-09-08T19:54:54,659                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve
2023-09-08T19:54:54,659     result = self._result = resolver.resolve(
2023-09-08T19:54:54,659                             ^^^^^^^^^^^^^^^^^
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2023-09-08T19:54:54,659     state = resolution.resolve(requirements, max_rounds=max_rounds)
2023-09-08T19:54:54,659             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2023-09-08T19:54:54,659     self._add_to_criteria(self.state.criteria, r, parent=None)
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2023-09-08T19:54:54,659     if not criterion.candidates:
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2023-09-08T19:54:54,659     return bool(self._sequence)
2023-09-08T19:54:54,659            ^^^^^^^^^^^^^^^^^^^^
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2023-09-08T19:54:54,659     return any(self)
2023-09-08T19:54:54,659            ^^^^^^^^^
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2023-09-08T19:54:54,659     return (c for c in iterator if id(c) not in self._incompatible_ids)
2023-09-08T19:54:54,659            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2023-09-08T19:54:54,659     candidate = func()
2023-09-08T19:54:54,659                 ^^^^^^
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link
2023-09-08T19:54:54,659     self._link_candidate_cache[link] = LinkCandidate(
2023-09-08T19:54:54,659                                        ^^^^^^^^^^^^^^
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__
2023-09-08T19:54:54,659     super().__init__(
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
2023-09-08T19:54:54,659     self.dist = self._prepare()
2023-09-08T19:54:54,659                 ^^^^^^^^^^^^^^^
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare
2023-09-08T19:54:54,659     dist = self._prepare_distribution()
2023-09-08T19:54:54,659            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution
2023-09-08T19:54:54,659     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2023-09-08T19:54:54,659            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement
2023-09-08T19:54:54,659     return self._prepare_linked_requirement(req, parallel_builds)
2023-09-08T19:54:54,659            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement
2023-09-08T19:54:54,659     dist = _get_prepared_distribution(
2023-09-08T19:54:54,659            ^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution
2023-09-08T19:54:54,659     abstract_dist.prepare_distribution_metadata(
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata
2023-09-08T19:54:54,659     self.req.prepare_metadata()
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata
2023-09-08T19:54:54,659     self.metadata_directory = generate_metadata_legacy(
2023-09-08T19:54:54,659                               ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T19:54:54,659   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2023-09-08T19:54:54,659     raise MetadataGenerationFailed(package_details=details) from error
2023-09-08T19:54:54,659 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2023-09-08T19:54:54,671 Removed hla-genotyper==0.4.0b1 from https://files.pythonhosted.org/packages/2c/2f/d55483a296af676a49a0e6d58454b1467adabb63068ab40bd047d80e44f8/hla-genotyper-0.4.0b1.tar.gz from build tracker '/tmp/pip-build-tracker-irrlpnkp'
2023-09-08T19:54:54,672 Removed build tracker: '/tmp/pip-build-tracker-irrlpnkp'