2023-09-08T20:00:41,988 Created temporary directory: /tmp/pip-build-tracker-cq5szs0m 2023-09-08T20:00:41,989 Initialized build tracking at /tmp/pip-build-tracker-cq5szs0m 2023-09-08T20:00:41,989 Created build tracker: /tmp/pip-build-tracker-cq5szs0m 2023-09-08T20:00:41,990 Entered build tracker: /tmp/pip-build-tracker-cq5szs0m 2023-09-08T20:00:41,990 Created temporary directory: /tmp/pip-wheel-utzit27w 2023-09-08T20:00:41,993 Created temporary directory: /tmp/pip-ephem-wheel-cache-k_81_fje 2023-09-08T20:00:42,015 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-08T20:00:42,018 2 location(s) to search for versions of pybigwig: 2023-09-08T20:00:42,018 * https://pypi.org/simple/pybigwig/ 2023-09-08T20:00:42,018 * https://www.piwheels.org/simple/pybigwig/ 2023-09-08T20:00:42,019 Fetching project page and analyzing links: https://pypi.org/simple/pybigwig/ 2023-09-08T20:00:42,020 Getting page https://pypi.org/simple/pybigwig/ 2023-09-08T20:00:42,021 Found 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https://files.pythonhosted.org/packages/7b/b7/e135efa69cd146d22920c196e4575d2ff5a0b19c8f3a29634f5b4c639764/pyBigWig-0.3.11.tar.gz (from https://pypi.org/simple/pybigwig/), version: 0.3.11 2023-09-08T20:00:42,193 Found link https://files.pythonhosted.org/packages/d5/0d/8e2a1edb9524790c6a4d0b70bc800a8e4afee1bc7bdd048c54b8d9cf1c32/pyBigWig-0.3.12.tar.gz (from https://pypi.org/simple/pybigwig/), version: 0.3.12 2023-09-08T20:00:42,193 Found link https://files.pythonhosted.org/packages/5c/9c/2e01d04b6fd31c1e09537c8f51410123c087da4974bdb0fcdb7ec25dab62/pyBigWig-0.3.13.tar.gz (from https://pypi.org/simple/pybigwig/), version: 0.3.13 2023-09-08T20:00:42,194 Found link https://files.pythonhosted.org/packages/b2/5f/31086a89f067e0f0ad3b5b039e1d99ed7f4e5e7bc0fe156aef724a45ed06/pyBigWig-0.3.14.tar.gz (from https://pypi.org/simple/pybigwig/), version: 0.3.14 2023-09-08T20:00:42,194 Found link 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https://files.pythonhosted.org/packages/9d/91/47d95d060d5525d21519132f27fa7c2a168255b497fdf4ff8b2dd0623558/pyBigWig-0.3.19.tar.gz (from https://pypi.org/simple/pybigwig/) (requires-python:>=3.7), version: 0.3.19 2023-09-08T20:00:42,198 Found link https://files.pythonhosted.org/packages/e2/18/eb175e8a15ae2822ffdab1e666dc8d081b1245e1064f2b36033af0076f3e/pyBigWig-0.3.20.tar.gz (from https://pypi.org/simple/pybigwig/) (requires-python:>=3.7), version: 0.3.20 2023-09-08T20:00:42,199 Skipping link: No binaries permitted for pybigwig: https://files.pythonhosted.org/packages/f4/4f/a86214d19e2f3c09d6de810716f2980a4f5dfab91b06136becfb655c705b/pyBigWig-0.3.21-cp37-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pybigwig/) (requires-python:>=3.7) 2023-09-08T20:00:42,200 Found link https://files.pythonhosted.org/packages/61/36/fdd88e5f84c2c0abe7b69470061766418112954cc7eae2a0d42921e65daa/pyBigWig-0.3.21.tar.gz (from https://pypi.org/simple/pybigwig/) (requires-python:>=3.7), version: 0.3.21 2023-09-08T20:00:42,200 Skipping link: No binaries permitted for pybigwig: https://files.pythonhosted.org/packages/3b/9c/b86f24903d39531876b98cb9b2bf17a3d4fcff5fa8a17dab9971bbe920f9/pyBigWig-0.3.22-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pybigwig/) (requires-python:>=3.7) 2023-09-08T20:00:42,201 Skipping link: No binaries permitted for pybigwig: https://files.pythonhosted.org/packages/33/39/a285068f210f7d96f6f7dc3eca814d555e9081e176158752d00883bf6175/pyBigWig-0.3.22-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pybigwig/) (requires-python:>=3.7) 2023-09-08T20:00:42,201 Skipping link: No binaries permitted for pybigwig: https://files.pythonhosted.org/packages/2b/b1/69afae16f08b9d63d0519d45fa64a96db19f637cdf25880974616889492f/pyBigWig-0.3.22-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pybigwig/) (requires-python:>=3.7) 2023-09-08T20:00:42,202 Skipping link: No binaries permitted for pybigwig: https://files.pythonhosted.org/packages/38/61/18c83ee35675f6ba26b1690347c7e9e378e0ad00a95f8b1c5fba9b867af0/pyBigWig-0.3.22-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pybigwig/) (requires-python:>=3.7) 2023-09-08T20:00:42,202 Skipping link: No binaries permitted for pybigwig: https://files.pythonhosted.org/packages/eb/6b/5524bb20b2c3f4914b0b4d2d5f255a844b4df4ba6853079ca30402f70c38/pyBigWig-0.3.22-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pybigwig/) (requires-python:>=3.7) 2023-09-08T20:00:42,203 Found link https://files.pythonhosted.org/packages/f0/57/334db9a75d6941876ef282cc7eb1885a24fe71d3c6522c19f717db4f8b73/pyBigWig-0.3.22.tar.gz (from https://pypi.org/simple/pybigwig/) (requires-python:>=3.7), version: 0.3.22 2023-09-08T20:00:42,204 Fetching project page and analyzing links: https://www.piwheels.org/simple/pybigwig/ 2023-09-08T20:00:42,204 Getting page https://www.piwheels.org/simple/pybigwig/ 2023-09-08T20:00:42,206 Found index url https://www.piwheels.org/simple/ 2023-09-08T20:00:42,749 Fetched page https://www.piwheels.org/simple/pybigwig/ as text/html 2023-09-08T20:00:42,806 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.3.22-cp39-cp39-linux_armv7l.whl#sha256=04ee7892b4901540ada8b22c8208135751d8107ee3c2b5b6a71f8924c011d53f (from https://www.piwheels.org/simple/pybigwig/) (requires-python:>=3.7) 2023-09-08T20:00:42,807 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.3.22-cp39-cp39-linux_armv6l.whl#sha256=04ee7892b4901540ada8b22c8208135751d8107ee3c2b5b6a71f8924c011d53f (from https://www.piwheels.org/simple/pybigwig/) (requires-python:>=3.7) 2023-09-08T20:00:42,808 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.3.22-cp37-cp37m-linux_armv7l.whl#sha256=c93bd6825ece1379643944297a4f9a33c010b3feb6e5a1c0311abcbe2775e707 (from https://www.piwheels.org/simple/pybigwig/) (requires-python:>=3.7) 2023-09-08T20:00:42,808 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.3.22-cp37-cp37m-linux_armv6l.whl#sha256=c93bd6825ece1379643944297a4f9a33c010b3feb6e5a1c0311abcbe2775e707 (from https://www.piwheels.org/simple/pybigwig/) (requires-python:>=3.7) 2023-09-08T20:00:42,809 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.3.21-cp37-abi3-linux_armv7l.whl#sha256=777e9e55c1ef9870fa2221f3ffe8904eea3dcba222b1278ac704bfffc4cd7c41 (from https://www.piwheels.org/simple/pybigwig/) (requires-python:>=3.7) 2023-09-08T20:00:42,810 Skipping link: No binaries permitted for pybigwig: 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https://www.piwheels.org/simple/pybigwig/pyBigWig-0.2.5-cp37-cp37m-linux_armv6l.whl#sha256=f5248b75bb2725f351abc496d556293e226e7c229d3232c2ee955b3291717cf3 (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,874 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.2.4-cp39-cp39-linux_armv7l.whl#sha256=f822b5409cb700dcc48fc5804a8f9611bc2c83b837389c2f1af261dabea8154f (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,874 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.2.4-cp39-cp39-linux_armv6l.whl#sha256=f822b5409cb700dcc48fc5804a8f9611bc2c83b837389c2f1af261dabea8154f (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,875 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.2.4-cp37-cp37m-linux_armv6l.whl#sha256=02ab2a553dc9eef3a0dea29260ed4249a9457277072140278e91ced28c26bb8f (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,875 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.2.4-cp37-cp37m-linux_armv7l.whl#sha256=02ab2a553dc9eef3a0dea29260ed4249a9457277072140278e91ced28c26bb8f (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,876 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.2.3-cp39-cp39-linux_armv7l.whl#sha256=6e5ea400e6a95bfa9a75a4533a8b19b811ad5148493e4921cba11447469f0b7c (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,876 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.2.3-cp39-cp39-linux_armv6l.whl#sha256=6e5ea400e6a95bfa9a75a4533a8b19b811ad5148493e4921cba11447469f0b7c (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,877 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.2.3-cp37-cp37m-linux_armv7l.whl#sha256=97c2dd8d2cac3ffb882103b4705a91de437a131d7a3f76540e3f9a04eaa98eff (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,878 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.2.3-cp37-cp37m-linux_armv6l.whl#sha256=97c2dd8d2cac3ffb882103b4705a91de437a131d7a3f76540e3f9a04eaa98eff (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,878 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.2.1-cp39-cp39-linux_armv7l.whl#sha256=3e7b6a14590b81fc0849054fc911db90993dbb401d0e60a0de9322644f864547 (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,879 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.2.1-cp39-cp39-linux_armv6l.whl#sha256=3e7b6a14590b81fc0849054fc911db90993dbb401d0e60a0de9322644f864547 (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,879 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.2.1-cp37-cp37m-linux_armv7l.whl#sha256=6771d6067a00918d24e4e1b640e5f9657c0ce682a06427af5078f8577ccd6e63 (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,879 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.2.1-cp37-cp37m-linux_armv6l.whl#sha256=6771d6067a00918d24e4e1b640e5f9657c0ce682a06427af5078f8577ccd6e63 (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,880 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.2.0-cp39-cp39-linux_armv7l.whl#sha256=834780f18dc7a2d64d89c5efa220d8488a49b40a414044990add6c428476b184 (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,880 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.2.0-cp39-cp39-linux_armv6l.whl#sha256=834780f18dc7a2d64d89c5efa220d8488a49b40a414044990add6c428476b184 (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,881 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.2.0-cp37-cp37m-linux_armv6l.whl#sha256=adfbfba3ddfe6fa3b8b5225ca0623bb589852afb229847e1be06544e5f5737a7 (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,881 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.2.0-cp37-cp37m-linux_armv7l.whl#sha256=adfbfba3ddfe6fa3b8b5225ca0623bb589852afb229847e1be06544e5f5737a7 (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,882 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.1.11-cp37-cp37m-linux_armv7l.whl#sha256=9b271b15d8f9c1a91a34f18e7723e44a16e8d6c2cabadc80413b0c685618f65e (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,883 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.1.11-cp37-cp37m-linux_armv6l.whl#sha256=9b271b15d8f9c1a91a34f18e7723e44a16e8d6c2cabadc80413b0c685618f65e (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,883 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.1.10-cp37-cp37m-linux_armv6l.whl#sha256=1dd741303efdb5abfd38d79f519c4910f3ef4a13c2e9406f3c07a9b2f3d4f871 (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,884 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.1.10-cp37-cp37m-linux_armv7l.whl#sha256=1dd741303efdb5abfd38d79f519c4910f3ef4a13c2e9406f3c07a9b2f3d4f871 (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,884 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.1.9-cp37-cp37m-linux_armv7l.whl#sha256=1343adcaf90f18cae142f1e989381b3f774f907f87ceb9abd11fd5bb4c2079a2 (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,885 Skipping link: No binaries permitted for pybigwig: https://www.piwheels.org/simple/pybigwig/pyBigWig-0.1.9-cp37-cp37m-linux_armv6l.whl#sha256=1343adcaf90f18cae142f1e989381b3f774f907f87ceb9abd11fd5bb4c2079a2 (from https://www.piwheels.org/simple/pybigwig/) 2023-09-08T20:00:42,885 Skipping link: not a file: https://www.piwheels.org/simple/pybigwig/ 2023-09-08T20:00:42,886 Skipping link: not a file: https://pypi.org/simple/pybigwig/ 2023-09-08T20:00:42,908 Given no hashes to check 1 links for project 'pybigwig': discarding no candidates 2023-09-08T20:00:42,926 Collecting pybigwig==0.2.1 2023-09-08T20:00:42,929 Created temporary directory: /tmp/pip-unpack-7p9a8bme 2023-09-08T20:00:43,149 Downloading pyBigWig-0.2.1.tar.gz (49 kB) 2023-09-08T20:00:43,246 Added pybigwig==0.2.1 from https://files.pythonhosted.org/packages/c7/93/b083cab6dcf79e5fc667eba2081ec2191cb0dd7801508eb377113479ce64/pyBigWig-0.2.1.tar.gz to build tracker '/tmp/pip-build-tracker-cq5szs0m' 2023-09-08T20:00:43,247 Running setup.py (path:/tmp/pip-wheel-utzit27w/pybigwig_703a824fef8f43e28bd57f7e2ada16fe/setup.py) egg_info for package pybigwig 2023-09-08T20:00:43,248 Created temporary directory: /tmp/pip-pip-egg-info-44sa8t6s 2023-09-08T20:00:43,249 Preparing metadata (setup.py): started 2023-09-08T20:00:43,250 Running command python setup.py egg_info 2023-09-08T20:00:43,818 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-09-08T20:00:43,818 !! 2023-09-08T20:00:43,819 ******************************************************************************** 2023-09-08T20:00:43,820 Usage of dash-separated 'description-file' will not be supported in future 2023-09-08T20:00:43,821 versions. Please use the underscore name 'description_file' instead. 2023-09-08T20:00:43,822 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-09-08T20:00:43,822 or your builds will no longer be supported. 2023-09-08T20:00:43,823 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-08T20:00:43,824 ******************************************************************************** 2023-09-08T20:00:43,825 !! 2023-09-08T20:00:43,825 opt = self.warn_dash_deprecation(opt, section) 2023-09-08T20:00:44,365 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-09-08T20:00:44,365 !! 2023-09-08T20:00:44,367 ******************************************************************************** 2023-09-08T20:00:44,367 Usage of dash-separated 'description-file' will not be supported in future 2023-09-08T20:00:44,368 versions. Please use the underscore name 'description_file' instead. 2023-09-08T20:00:44,369 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-09-08T20:00:44,369 or your builds will no longer be supported. 2023-09-08T20:00:44,371 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-08T20:00:44,371 ******************************************************************************** 2023-09-08T20:00:44,372 !! 2023-09-08T20:00:44,373 opt = self.warn_dash_deprecation(opt, section) 2023-09-08T20:00:44,407 running egg_info 2023-09-08T20:00:44,409 creating /tmp/pip-pip-egg-info-44sa8t6s/pyBigWig.egg-info 2023-09-08T20:00:44,434 writing /tmp/pip-pip-egg-info-44sa8t6s/pyBigWig.egg-info/PKG-INFO 2023-09-08T20:00:44,437 writing dependency_links to /tmp/pip-pip-egg-info-44sa8t6s/pyBigWig.egg-info/dependency_links.txt 2023-09-08T20:00:44,439 writing top-level names to /tmp/pip-pip-egg-info-44sa8t6s/pyBigWig.egg-info/top_level.txt 2023-09-08T20:00:44,440 writing manifest file '/tmp/pip-pip-egg-info-44sa8t6s/pyBigWig.egg-info/SOURCES.txt' 2023-09-08T20:00:44,539 reading manifest file '/tmp/pip-pip-egg-info-44sa8t6s/pyBigWig.egg-info/SOURCES.txt' 2023-09-08T20:00:44,544 reading manifest template 'MANIFEST.in' 2023-09-08T20:00:44,547 warning: no files found matching 'galaxy/*' 2023-09-08T20:00:44,550 warning: no previously-included files found matching 'pyBigWig.egg-info/*' 2023-09-08T20:00:44,551 adding license file 'LICENSE.txt' 2023-09-08T20:00:44,551 writing manifest file '/tmp/pip-pip-egg-info-44sa8t6s/pyBigWig.egg-info/SOURCES.txt' 2023-09-08T20:00:44,662 Preparing metadata (setup.py): finished with status 'done' 2023-09-08T20:00:44,665 Source in /tmp/pip-wheel-utzit27w/pybigwig_703a824fef8f43e28bd57f7e2ada16fe has version 0.2.1, which satisfies requirement pybigwig==0.2.1 from https://files.pythonhosted.org/packages/c7/93/b083cab6dcf79e5fc667eba2081ec2191cb0dd7801508eb377113479ce64/pyBigWig-0.2.1.tar.gz 2023-09-08T20:00:44,666 Removed pybigwig==0.2.1 from https://files.pythonhosted.org/packages/c7/93/b083cab6dcf79e5fc667eba2081ec2191cb0dd7801508eb377113479ce64/pyBigWig-0.2.1.tar.gz from build tracker '/tmp/pip-build-tracker-cq5szs0m' 2023-09-08T20:00:44,670 Created temporary directory: /tmp/pip-unpack-nqceztv5 2023-09-08T20:00:44,671 Created temporary directory: /tmp/pip-unpack-tdya5eab 2023-09-08T20:00:44,673 Building wheels for collected packages: pybigwig 2023-09-08T20:00:44,681 Created temporary directory: /tmp/pip-wheel-nq6f5gwn 2023-09-08T20:00:44,682 Building wheel for pybigwig (setup.py): started 2023-09-08T20:00:44,683 Destination directory: /tmp/pip-wheel-nq6f5gwn 2023-09-08T20:00:44,684 Running command python setup.py bdist_wheel 2023-09-08T20:00:45,166 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-09-08T20:00:45,166 !! 2023-09-08T20:00:45,167 ******************************************************************************** 2023-09-08T20:00:45,168 Usage of dash-separated 'description-file' will not be supported in future 2023-09-08T20:00:45,168 versions. Please use the underscore name 'description_file' instead. 2023-09-08T20:00:45,170 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-09-08T20:00:45,170 or your builds will no longer be supported. 2023-09-08T20:00:45,171 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-08T20:00:45,172 ******************************************************************************** 2023-09-08T20:00:45,173 !! 2023-09-08T20:00:45,174 opt = self.warn_dash_deprecation(opt, section) 2023-09-08T20:00:45,688 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-09-08T20:00:45,688 !! 2023-09-08T20:00:45,689 ******************************************************************************** 2023-09-08T20:00:45,690 Usage of dash-separated 'description-file' will not be supported in future 2023-09-08T20:00:45,690 versions. Please use the underscore name 'description_file' instead. 2023-09-08T20:00:45,691 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-09-08T20:00:45,692 or your builds will no longer be supported. 2023-09-08T20:00:45,693 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-08T20:00:45,693 ******************************************************************************** 2023-09-08T20:00:45,695 !! 2023-09-08T20:00:45,695 opt = self.warn_dash_deprecation(opt, section) 2023-09-08T20:00:45,720 running bdist_wheel 2023-09-08T20:00:45,811 running build 2023-09-08T20:00:45,812 running build_py 2023-09-08T20:00:45,838 creating build 2023-09-08T20:00:45,838 creating build/lib.linux-armv7l-cpython-311 2023-09-08T20:00:45,839 creating build/lib.linux-armv7l-cpython-311/pyBigWigTest 2023-09-08T20:00:45,840 copying pyBigWigTest/__init__.py -> build/lib.linux-armv7l-cpython-311/pyBigWigTest 2023-09-08T20:00:45,841 copying pyBigWigTest/test.py -> build/lib.linux-armv7l-cpython-311/pyBigWigTest 2023-09-08T20:00:45,843 running egg_info 2023-09-08T20:00:45,898 writing pyBigWig.egg-info/PKG-INFO 2023-09-08T20:00:45,901 writing dependency_links to pyBigWig.egg-info/dependency_links.txt 2023-09-08T20:00:45,902 writing top-level names to pyBigWig.egg-info/top_level.txt 2023-09-08T20:00:45,928 reading manifest file 'pyBigWig.egg-info/SOURCES.txt' 2023-09-08T20:00:45,930 reading manifest template 'MANIFEST.in' 2023-09-08T20:00:45,932 warning: no files found matching 'galaxy/*' 2023-09-08T20:00:45,933 adding license file 'LICENSE.txt' 2023-09-08T20:00:45,936 writing manifest file 'pyBigWig.egg-info/SOURCES.txt' 2023-09-08T20:00:45,937 copying pyBigWigTest/__init__.pyc -> build/lib.linux-armv7l-cpython-311/pyBigWigTest 2023-09-08T20:00:45,939 copying pyBigWigTest/test.bw -> build/lib.linux-armv7l-cpython-311/pyBigWigTest 2023-09-08T20:00:45,942 copying pyBigWigTest/test.pyc -> build/lib.linux-armv7l-cpython-311/pyBigWigTest 2023-09-08T20:00:45,944 running build_ext 2023-09-08T20:00:46,444 building 'pyBigWig' extension 2023-09-08T20:00:46,445 creating build/temp.linux-armv7l-cpython-311 2023-09-08T20:00:46,445 creating build/temp.linux-armv7l-cpython-311/libBigWig 2023-09-08T20:00:46,446 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -IlibBigWig -I/usr/include/python3.11 -I/usr/include/python3.11 -c libBigWig/bwRead.c -o build/temp.linux-armv7l-cpython-311/libBigWig/bwRead.o 2023-09-08T20:00:47,117 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -IlibBigWig -I/usr/include/python3.11 -I/usr/include/python3.11 -c libBigWig/bwStats.c -o build/temp.linux-armv7l-cpython-311/libBigWig/bwStats.o 2023-09-08T20:00:48,121 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -IlibBigWig -I/usr/include/python3.11 -I/usr/include/python3.11 -c libBigWig/bwValues.c -o build/temp.linux-armv7l-cpython-311/libBigWig/bwValues.o 2023-09-08T20:00:49,078 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -IlibBigWig -I/usr/include/python3.11 -I/usr/include/python3.11 -c libBigWig/bwWrite.c -o build/temp.linux-armv7l-cpython-311/libBigWig/bwWrite.o 2023-09-08T20:00:51,428 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -IlibBigWig -I/usr/include/python3.11 -I/usr/include/python3.11 -c libBigWig/io.c -o build/temp.linux-armv7l-cpython-311/libBigWig/io.o 2023-09-08T20:00:51,599 libBigWig/io.c: In function ‘getContentLength’: 2023-09-08T20:00:51,599 libBigWig/io.c:13:5: warning: ‘CURLINFO_CONTENT_LENGTH_DOWNLOAD’ is deprecated: since 7.55.0. Use CURLINFO_CONTENT_LENGTH_DOWNLOAD_T [-Wdeprecated-declarations] 2023-09-08T20:00:51,600 13 | if(curl_easy_getinfo(URL->x.curl, CURLINFO_CONTENT_LENGTH_DOWNLOAD, &size) != CURLE_OK) { 2023-09-08T20:00:51,601 | ^~ 2023-09-08T20:00:51,601 In file included from libBigWig/io.c:1: 2023-09-08T20:00:51,602 /usr/include/arm-linux-gnueabihf/curl/curl.h:2858:3: note: declared here 2023-09-08T20:00:51,603 2858 | CURLINFO_CONTENT_LENGTH_DOWNLOAD 2023-09-08T20:00:51,603 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-08T20:00:51,604 libBigWig/io.c: In function ‘urlFetchData’: 2023-09-08T20:00:51,604 libBigWig/io.c:29:22: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2023-09-08T20:00:51,605 29 | sprintf(range,"%lu-%lu", URL->filePos, URL->filePos+bufSize-1); 2023-09-08T20:00:51,605 | ~~^ ~~~~~~~~~~~~ 2023-09-08T20:00:51,606 | | | 2023-09-08T20:00:51,606 | | size_t {aka unsigned int} 2023-09-08T20:00:51,607 | long unsigned int 2023-09-08T20:00:51,607 | %u 2023-09-08T20:00:51,614 libBigWig/io.c: In function ‘urlSeek’: 2023-09-08T20:00:51,614 libBigWig/io.c:121:30: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2023-09-08T20:00:51,615 121 | sprintf(range,"%lu-%lu", pos, pos+URL->bufSize-1); 2023-09-08T20:00:51,615 | ~~^ ~~~ 2023-09-08T20:00:51,616 | | | 2023-09-08T20:00:51,616 | | size_t {aka unsigned int} 2023-09-08T20:00:51,617 | long unsigned int 2023-09-08T20:00:51,617 | %u 2023-09-08T20:00:51,618 libBigWig/io.c:121:34: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2023-09-08T20:00:51,618 121 | sprintf(range,"%lu-%lu", pos, pos+URL->bufSize-1); 2023-09-08T20:00:51,619 | ~~^ ~~~~~~~~~~~~~~~~~~ 2023-09-08T20:00:51,619 | | | 2023-09-08T20:00:51,620 | long unsigned int size_t {aka unsigned int} 2023-09-08T20:00:51,620 | %u 2023-09-08T20:00:51,638 libBigWig/io.c: In function ‘urlOpen’: 2023-09-08T20:00:51,639 libBigWig/io.c:189:33: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 2023-09-08T20:00:51,639 189 | sprintf(range, "0-%lu", URL->bufSize-1); 2023-09-08T20:00:51,640 | ~~^ ~~~~~~~~~~~~~~ 2023-09-08T20:00:51,641 | | | 2023-09-08T20:00:51,641 | | size_t {aka unsigned int} 2023-09-08T20:00:51,642 | long unsigned int 2023-09-08T20:00:51,642 | %u 2023-09-08T20:00:51,988 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -IlibBigWig -I/usr/include/python3.11 -I/usr/include/python3.11 -c pyBigWig.c -o build/temp.linux-armv7l-cpython-311/pyBigWig.o 2023-09-08T20:00:52,462 pyBigWig.c: In function ‘Numeric2Uint’: 2023-09-08T20:00:52,463 pyBigWig.c:310:10: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘unsigned int’ [-Wsign-compare] 2023-09-08T20:00:52,464 310 | if(l > 0xFFFFFFFF) { 2023-09-08T20:00:52,465 | ^ 2023-09-08T20:00:52,466 pyBigWig.c: In function ‘pyBwAddHeader’: 2023-09-08T20:00:52,468 pyBigWig.c:390:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘unsigned int’ [-Wsign-compare] 2023-09-08T20:00:52,469 390 | if(zoomTmp > 0xFFFFFFFF) { 2023-09-08T20:00:52,470 | ^ 2023-09-08T20:00:53,687 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/libBigWig/bwRead.o build/temp.linux-armv7l-cpython-311/libBigWig/bwStats.o build/temp.linux-armv7l-cpython-311/libBigWig/bwValues.o build/temp.linux-armv7l-cpython-311/libBigWig/bwWrite.o build/temp.linux-armv7l-cpython-311/libBigWig/io.o build/temp.linux-armv7l-cpython-311/pyBigWig.o -L/usr/lib/arm-linux-gnueabihf -L/usr/lib/python3.11/config-3.11-arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lm -lz -lcurl -lpython3.11 -o build/lib.linux-armv7l-cpython-311/pyBigWig.cpython-311-arm-linux-gnueabihf.so 2023-09-08T20:00:53,888 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-09-08T20:00:53,888 !! 2023-09-08T20:00:53,889 ******************************************************************************** 2023-09-08T20:00:53,889 Please avoid running ``setup.py`` directly. 2023-09-08T20:00:53,890 Instead, use pypa/build, pypa/installer or other 2023-09-08T20:00:53,890 standards-based tools. 2023-09-08T20:00:53,891 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-09-08T20:00:53,892 ******************************************************************************** 2023-09-08T20:00:53,893 !! 2023-09-08T20:00:53,893 self.initialize_options() 2023-09-08T20:00:53,911 installing to build/bdist.linux-armv7l/wheel 2023-09-08T20:00:53,912 running install 2023-09-08T20:00:53,935 running install_lib 2023-09-08T20:00:53,960 creating build/bdist.linux-armv7l 2023-09-08T20:00:53,960 creating build/bdist.linux-armv7l/wheel 2023-09-08T20:00:53,961 copying build/lib.linux-armv7l-cpython-311/pyBigWig.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2023-09-08T20:00:53,968 creating build/bdist.linux-armv7l/wheel/pyBigWigTest 2023-09-08T20:00:53,969 copying build/lib.linux-armv7l-cpython-311/pyBigWigTest/test.bw -> build/bdist.linux-armv7l/wheel/pyBigWigTest 2023-09-08T20:00:53,972 copying build/lib.linux-armv7l-cpython-311/pyBigWigTest/__init__.pyc -> build/bdist.linux-armv7l/wheel/pyBigWigTest 2023-09-08T20:00:53,974 copying build/lib.linux-armv7l-cpython-311/pyBigWigTest/__init__.py -> build/bdist.linux-armv7l/wheel/pyBigWigTest 2023-09-08T20:00:53,976 copying build/lib.linux-armv7l-cpython-311/pyBigWigTest/test.py -> build/bdist.linux-armv7l/wheel/pyBigWigTest 2023-09-08T20:00:53,978 copying build/lib.linux-armv7l-cpython-311/pyBigWigTest/test.pyc -> build/bdist.linux-armv7l/wheel/pyBigWigTest 2023-09-08T20:00:53,981 running install_egg_info 2023-09-08T20:00:54,011 Copying pyBigWig.egg-info to build/bdist.linux-armv7l/wheel/pyBigWig-0.2.1-py3.11.egg-info 2023-09-08T20:00:54,020 running install_scripts 2023-09-08T20:00:54,071 creating build/bdist.linux-armv7l/wheel/pyBigWig-0.2.1.dist-info/WHEEL 2023-09-08T20:00:54,074 creating '/tmp/pip-wheel-nq6f5gwn/pyBigWig-0.2.1-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-08T20:00:54,128 adding 'pyBigWig.cpython-311-arm-linux-gnueabihf.so' 2023-09-08T20:00:54,133 adding 'pyBigWigTest/__init__.py' 2023-09-08T20:00:54,135 adding 'pyBigWigTest/__init__.pyc' 2023-09-08T20:00:54,137 adding 'pyBigWigTest/test.bw' 2023-09-08T20:00:54,139 adding 'pyBigWigTest/test.py' 2023-09-08T20:00:54,141 adding 'pyBigWigTest/test.pyc' 2023-09-08T20:00:54,143 adding 'pyBigWig-0.2.1.dist-info/LICENSE.txt' 2023-09-08T20:00:54,144 adding 'pyBigWig-0.2.1.dist-info/METADATA' 2023-09-08T20:00:54,146 adding 'pyBigWig-0.2.1.dist-info/WHEEL' 2023-09-08T20:00:54,147 adding 'pyBigWig-0.2.1.dist-info/top_level.txt' 2023-09-08T20:00:54,148 adding 'pyBigWig-0.2.1.dist-info/RECORD' 2023-09-08T20:00:54,152 removing build/bdist.linux-armv7l/wheel 2023-09-08T20:00:54,304 Building wheel for pybigwig (setup.py): finished with status 'done' 2023-09-08T20:00:54,308 Created wheel for pybigwig: filename=pyBigWig-0.2.1-cp311-cp311-linux_armv7l.whl size=122820 sha256=757db9c6cbda85ac5f24f38d36e86e03bd1ce96f23a683ce02928e975db4c0b8 2023-09-08T20:00:54,309 Stored in directory: /tmp/pip-ephem-wheel-cache-k_81_fje/wheels/93/79/ec/2d14c10931c9ce30d9a7e1d3cbe5baa86fbc93bd0e198378dd 2023-09-08T20:00:54,318 Successfully built pybigwig 2023-09-08T20:00:54,326 Removed build tracker: '/tmp/pip-build-tracker-cq5szs0m'