2023-09-08T23:58:58,276 Created temporary directory: /tmp/pip-build-tracker-enaa55_f 2023-09-08T23:58:58,277 Initialized build tracking at /tmp/pip-build-tracker-enaa55_f 2023-09-08T23:58:58,277 Created build tracker: /tmp/pip-build-tracker-enaa55_f 2023-09-08T23:58:58,278 Entered build tracker: /tmp/pip-build-tracker-enaa55_f 2023-09-08T23:58:58,279 Created temporary directory: /tmp/pip-wheel-s2r0zudc 2023-09-08T23:58:58,281 Created temporary directory: /tmp/pip-ephem-wheel-cache-lb3ru54u 2023-09-08T23:58:58,303 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-08T23:58:58,306 2 location(s) to search for versions of uniprotmapper: 2023-09-08T23:58:58,306 * https://pypi.org/simple/uniprotmapper/ 2023-09-08T23:58:58,306 * https://www.piwheels.org/simple/uniprotmapper/ 2023-09-08T23:58:58,307 Fetching project page and analyzing links: https://pypi.org/simple/uniprotmapper/ 2023-09-08T23:58:58,308 Getting page https://pypi.org/simple/uniprotmapper/ 2023-09-08T23:58:58,309 Found index url https://pypi.org/simple/ 2023-09-08T23:58:58,450 Fetched page https://pypi.org/simple/uniprotmapper/ as application/vnd.pypi.simple.v1+json 2023-09-08T23:58:58,452 Found link https://files.pythonhosted.org/packages/f8/05/247ad1f674e35c290b1f56f4a8f4cb09a21df9109a734fc3017bb568e7af/uniprotmapper-0.0.3.dev0.tar.gz (from https://pypi.org/simple/uniprotmapper/), version: 0.0.3.dev0 2023-09-08T23:58:58,453 Found link https://files.pythonhosted.org/packages/1b/67/5e87968d4446daa9a535aee3b639c8c7d6a497499a25183a3a34b5aab856/uniprotmapper-0.0.4.dev0.tar.gz (from https://pypi.org/simple/uniprotmapper/), version: 0.0.4.dev0 2023-09-08T23:58:58,453 Found link https://files.pythonhosted.org/packages/34/74/e92073c6373779f15937b3afb796d9bacf25e6f6afd7c01d952aab560730/uniprotmapper-0.1.dev0.tar.gz (from https://pypi.org/simple/uniprotmapper/), version: 0.1.dev0 2023-09-08T23:58:58,454 Skipping link: unsupported archive format: .exe: https://files.pythonhosted.org/packages/db/17/7a27569f0832ad4fa8a6c93af4aab3eced324f2edd7d1345f30d2b31168d/uniprotmapper-0.2.dev0.macosx-10.11-intel.exe (from https://pypi.org/simple/uniprotmapper/) 2023-09-08T23:58:58,455 Found link https://files.pythonhosted.org/packages/44/75/31c6718890e8d5d1cbdb5ab3300e5f7de5defc73c57b5bcbedab64acbb61/uniprotmapper-0.2.dev0.tar.gz (from https://pypi.org/simple/uniprotmapper/), version: 0.2.dev0 2023-09-08T23:58:58,455 Found link https://files.pythonhosted.org/packages/bf/99/004f8c8190c5ca083d6d2d3c3d84bdb6b2b51de800919936503b6ba72723/uniprotmapper-0.3.dev0.tar.gz (from https://pypi.org/simple/uniprotmapper/), version: 0.3.dev0 2023-09-08T23:58:58,456 Fetching project page and analyzing links: https://www.piwheels.org/simple/uniprotmapper/ 2023-09-08T23:58:58,457 Getting page https://www.piwheels.org/simple/uniprotmapper/ 2023-09-08T23:58:58,458 Found index url https://www.piwheels.org/simple/ 2023-09-08T23:58:58,709 Fetched page https://www.piwheels.org/simple/uniprotmapper/ as text/html 2023-09-08T23:58:58,711 Skipping link: No binaries permitted for uniprotmapper: https://www.piwheels.org/simple/uniprotmapper/uniprotmapper-0.0.4.dev0-py3-none-any.whl#sha256=319e983fb3d079c442b379520044e25c2c1d78913bfa8d151db10f19f2afcc61 (from https://www.piwheels.org/simple/uniprotmapper/) 2023-09-08T23:58:58,712 Skipping link: No binaries permitted for uniprotmapper: https://www.piwheels.org/simple/uniprotmapper/uniprotmapper-0.3.dev0-py3-none-any.whl#sha256=a3b6002104169291b3afae42ff80ba44561f50c528c49142e6d8eed0792b6938 (from https://www.piwheels.org/simple/uniprotmapper/) 2023-09-08T23:58:58,713 Skipping link: not a file: https://www.piwheels.org/simple/uniprotmapper/ 2023-09-08T23:58:58,713 Skipping link: not a file: https://pypi.org/simple/uniprotmapper/ 2023-09-08T23:58:58,732 Given no hashes to check 1 links for project 'uniprotmapper': discarding no candidates 2023-09-08T23:58:58,750 Collecting uniprotmapper==0.2.dev0 2023-09-08T23:58:58,753 Created temporary directory: /tmp/pip-unpack-8rqm_b28 2023-09-08T23:58:58,964 Downloading uniprotmapper-0.2.dev0.tar.gz (2.7 kB) 2023-09-08T23:58:58,984 Added uniprotmapper==0.2.dev0 from https://files.pythonhosted.org/packages/44/75/31c6718890e8d5d1cbdb5ab3300e5f7de5defc73c57b5bcbedab64acbb61/uniprotmapper-0.2.dev0.tar.gz to build tracker '/tmp/pip-build-tracker-enaa55_f' 2023-09-08T23:58:58,986 Running setup.py (path:/tmp/pip-wheel-s2r0zudc/uniprotmapper_d27e8916ef34403d81eda6881eef44de/setup.py) egg_info for package uniprotmapper 2023-09-08T23:58:58,986 Created temporary directory: /tmp/pip-pip-egg-info-ns72z6vw 2023-09-08T23:58:58,987 Preparing metadata (setup.py): started 2023-09-08T23:58:58,988 Running command python setup.py egg_info 2023-09-08T23:58:59,423 Traceback (most recent call last): 2023-09-08T23:58:59,423 File "", line 2, in 2023-09-08T23:58:59,424 File "", line 34, in 2023-09-08T23:58:59,425 File "/tmp/pip-wheel-s2r0zudc/uniprotmapper_d27e8916ef34403d81eda6881eef44de/setup.py", line 2, in 2023-09-08T23:58:59,426 f=open("README.md", "r") 2023-09-08T23:58:59,426 ^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:58:59,427 FileNotFoundError: [Errno 2] No such file or directory: 'README.md' 2023-09-08T23:58:59,495 ERROR: [present-rich] python setup.py egg_info exited with 1 2023-09-08T23:58:59,508 [bold magenta]full command[/]: [blue]/usr/bin/python3 -c ' 2023-09-08T23:58:59,508 exec(compile('"'"''"'"''"'"' 2023-09-08T23:58:59,508 # This is -- a caller that pip uses to run setup.py 2023-09-08T23:58:59,508 # 2023-09-08T23:58:59,508 # - It imports setuptools before invoking setup.py, to enable projects that directly 2023-09-08T23:58:59,508 # import from `distutils.core` to work with newer packaging standards. 2023-09-08T23:58:59,508 # - It provides a clear error message when setuptools is not installed. 2023-09-08T23:58:59,508 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2023-09-08T23:58:59,508 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2023-09-08T23:58:59,508 # manifest_maker: standard file '"'"'-c'"'"' not found". 2023-09-08T23:58:59,508 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2023-09-08T23:58:59,508 import os, sys, tokenize 2023-09-08T23:58:59,508 2023-09-08T23:58:59,508 try: 2023-09-08T23:58:59,508 import setuptools 2023-09-08T23:58:59,508 except ImportError as error: 2023-09-08T23:58:59,508 print( 2023-09-08T23:58:59,508 "ERROR: Can not execute `setup.py` since setuptools is not available in " 2023-09-08T23:58:59,508 "the build environment.", 2023-09-08T23:58:59,508 file=sys.stderr, 2023-09-08T23:58:59,508 ) 2023-09-08T23:58:59,508 sys.exit(1) 2023-09-08T23:58:59,508 2023-09-08T23:58:59,508 __file__ = %r 2023-09-08T23:58:59,508 sys.argv[0] = __file__ 2023-09-08T23:58:59,508 2023-09-08T23:58:59,508 if os.path.exists(__file__): 2023-09-08T23:58:59,508 filename = __file__ 2023-09-08T23:58:59,508 with tokenize.open(__file__) as f: 2023-09-08T23:58:59,508 setup_py_code = f.read() 2023-09-08T23:58:59,508 else: 2023-09-08T23:58:59,508 filename = "" 2023-09-08T23:58:59,508 setup_py_code = "from setuptools import setup; setup()" 2023-09-08T23:58:59,508 2023-09-08T23:58:59,508 exec(compile(setup_py_code, filename, "exec")) 2023-09-08T23:58:59,508 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-s2r0zudc/uniprotmapper_d27e8916ef34403d81eda6881eef44de/setup.py'"'"',), "", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-ns72z6vw[/] 2023-09-08T23:58:59,509 [bold magenta]cwd[/]: /tmp/pip-wheel-s2r0zudc/uniprotmapper_d27e8916ef34403d81eda6881eef44de/ 2023-09-08T23:58:59,509 Preparing metadata (setup.py): finished with status 'error' 2023-09-08T23:58:59,511 ERROR: [present-rich] metadata generation failed 2023-09-08T23:58:59,516 Exception information: 2023-09-08T23:58:59,516 Traceback (most recent call last): 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata 2023-09-08T23:58:59,516 call_subprocess( 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess 2023-09-08T23:58:59,516 raise error 2023-09-08T23:58:59,516 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1 2023-09-08T23:58:59,516 2023-09-08T23:58:59,516 The above exception was the direct cause of the following exception: 2023-09-08T23:58:59,516 2023-09-08T23:58:59,516 Traceback (most recent call last): 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-09-08T23:58:59,516 status = run_func(*args) 2023-09-08T23:58:59,516 ^^^^^^^^^^^^^^^ 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-09-08T23:58:59,516 return func(self, options, args) 2023-09-08T23:58:59,516 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2023-09-08T23:58:59,516 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2023-09-08T23:58:59,516 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve 2023-09-08T23:58:59,516 result = self._result = resolver.resolve( 2023-09-08T23:58:59,516 ^^^^^^^^^^^^^^^^^ 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve 2023-09-08T23:58:59,516 state = resolution.resolve(requirements, max_rounds=max_rounds) 2023-09-08T23:58:59,516 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve 2023-09-08T23:58:59,516 self._add_to_criteria(self.state.criteria, r, parent=None) 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria 2023-09-08T23:58:59,516 if not criterion.candidates: 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__ 2023-09-08T23:58:59,516 return bool(self._sequence) 2023-09-08T23:58:59,516 ^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__ 2023-09-08T23:58:59,516 return any(self) 2023-09-08T23:58:59,516 ^^^^^^^^^ 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in 2023-09-08T23:58:59,516 return (c for c in iterator if id(c) not in self._incompatible_ids) 2023-09-08T23:58:59,516 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built 2023-09-08T23:58:59,516 candidate = func() 2023-09-08T23:58:59,516 ^^^^^^ 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link 2023-09-08T23:58:59,516 self._link_candidate_cache[link] = LinkCandidate( 2023-09-08T23:58:59,516 ^^^^^^^^^^^^^^ 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__ 2023-09-08T23:58:59,516 super().__init__( 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__ 2023-09-08T23:58:59,516 self.dist = self._prepare() 2023-09-08T23:58:59,516 ^^^^^^^^^^^^^^^ 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare 2023-09-08T23:58:59,516 dist = self._prepare_distribution() 2023-09-08T23:58:59,516 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution 2023-09-08T23:58:59,516 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2023-09-08T23:58:59,516 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement 2023-09-08T23:58:59,516 return self._prepare_linked_requirement(req, parallel_builds) 2023-09-08T23:58:59,516 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement 2023-09-08T23:58:59,516 dist = _get_prepared_distribution( 2023-09-08T23:58:59,516 ^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution 2023-09-08T23:58:59,516 abstract_dist.prepare_distribution_metadata( 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata 2023-09-08T23:58:59,516 self.req.prepare_metadata() 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata 2023-09-08T23:58:59,516 self.metadata_directory = generate_metadata_legacy( 2023-09-08T23:58:59,516 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:58:59,516 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata 2023-09-08T23:58:59,516 raise MetadataGenerationFailed(package_details=details) from error 2023-09-08T23:58:59,516 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2023-09-08T23:58:59,529 Removed uniprotmapper==0.2.dev0 from https://files.pythonhosted.org/packages/44/75/31c6718890e8d5d1cbdb5ab3300e5f7de5defc73c57b5bcbedab64acbb61/uniprotmapper-0.2.dev0.tar.gz from build tracker '/tmp/pip-build-tracker-enaa55_f' 2023-09-08T23:58:59,530 Removed build tracker: '/tmp/pip-build-tracker-enaa55_f'