2023-09-08T23:58:59,797 Created temporary directory: /tmp/pip-build-tracker-a0j6tbj4 2023-09-08T23:58:59,798 Initialized build tracking at /tmp/pip-build-tracker-a0j6tbj4 2023-09-08T23:58:59,799 Created build tracker: /tmp/pip-build-tracker-a0j6tbj4 2023-09-08T23:58:59,799 Entered build tracker: /tmp/pip-build-tracker-a0j6tbj4 2023-09-08T23:58:59,800 Created temporary directory: /tmp/pip-wheel-25nl_wks 2023-09-08T23:58:59,803 Created temporary directory: /tmp/pip-ephem-wheel-cache-5t922c6r 2023-09-08T23:58:59,824 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-08T23:58:59,828 2 location(s) to search for versions of uniprotmapper: 2023-09-08T23:58:59,828 * https://pypi.org/simple/uniprotmapper/ 2023-09-08T23:58:59,828 * https://www.piwheels.org/simple/uniprotmapper/ 2023-09-08T23:58:59,829 Fetching project page and analyzing links: https://pypi.org/simple/uniprotmapper/ 2023-09-08T23:58:59,829 Getting page https://pypi.org/simple/uniprotmapper/ 2023-09-08T23:58:59,831 Found index url https://pypi.org/simple/ 2023-09-08T23:58:59,973 Fetched page https://pypi.org/simple/uniprotmapper/ as application/vnd.pypi.simple.v1+json 2023-09-08T23:58:59,976 Found link https://files.pythonhosted.org/packages/f8/05/247ad1f674e35c290b1f56f4a8f4cb09a21df9109a734fc3017bb568e7af/uniprotmapper-0.0.3.dev0.tar.gz (from https://pypi.org/simple/uniprotmapper/), version: 0.0.3.dev0 2023-09-08T23:58:59,976 Found link https://files.pythonhosted.org/packages/1b/67/5e87968d4446daa9a535aee3b639c8c7d6a497499a25183a3a34b5aab856/uniprotmapper-0.0.4.dev0.tar.gz (from https://pypi.org/simple/uniprotmapper/), version: 0.0.4.dev0 2023-09-08T23:58:59,977 Found link https://files.pythonhosted.org/packages/34/74/e92073c6373779f15937b3afb796d9bacf25e6f6afd7c01d952aab560730/uniprotmapper-0.1.dev0.tar.gz (from https://pypi.org/simple/uniprotmapper/), version: 0.1.dev0 2023-09-08T23:58:59,977 Skipping link: unsupported archive format: .exe: https://files.pythonhosted.org/packages/db/17/7a27569f0832ad4fa8a6c93af4aab3eced324f2edd7d1345f30d2b31168d/uniprotmapper-0.2.dev0.macosx-10.11-intel.exe (from https://pypi.org/simple/uniprotmapper/) 2023-09-08T23:58:59,978 Found link https://files.pythonhosted.org/packages/44/75/31c6718890e8d5d1cbdb5ab3300e5f7de5defc73c57b5bcbedab64acbb61/uniprotmapper-0.2.dev0.tar.gz (from https://pypi.org/simple/uniprotmapper/), version: 0.2.dev0 2023-09-08T23:58:59,979 Found link https://files.pythonhosted.org/packages/bf/99/004f8c8190c5ca083d6d2d3c3d84bdb6b2b51de800919936503b6ba72723/uniprotmapper-0.3.dev0.tar.gz (from https://pypi.org/simple/uniprotmapper/), version: 0.3.dev0 2023-09-08T23:58:59,980 Fetching project page and analyzing links: https://www.piwheels.org/simple/uniprotmapper/ 2023-09-08T23:58:59,981 Getting page https://www.piwheels.org/simple/uniprotmapper/ 2023-09-08T23:58:59,982 Found index url https://www.piwheels.org/simple/ 2023-09-08T23:59:00,240 Fetched page https://www.piwheels.org/simple/uniprotmapper/ as text/html 2023-09-08T23:59:00,242 Skipping link: No binaries permitted for uniprotmapper: https://www.piwheels.org/simple/uniprotmapper/uniprotmapper-0.0.4.dev0-py3-none-any.whl#sha256=319e983fb3d079c442b379520044e25c2c1d78913bfa8d151db10f19f2afcc61 (from https://www.piwheels.org/simple/uniprotmapper/) 2023-09-08T23:59:00,243 Skipping link: No binaries permitted for uniprotmapper: https://www.piwheels.org/simple/uniprotmapper/uniprotmapper-0.3.dev0-py3-none-any.whl#sha256=a3b6002104169291b3afae42ff80ba44561f50c528c49142e6d8eed0792b6938 (from https://www.piwheels.org/simple/uniprotmapper/) 2023-09-08T23:59:00,243 Skipping link: not a file: https://www.piwheels.org/simple/uniprotmapper/ 2023-09-08T23:59:00,244 Skipping link: not a file: https://pypi.org/simple/uniprotmapper/ 2023-09-08T23:59:00,263 Given no hashes to check 1 links for project 'uniprotmapper': discarding no candidates 2023-09-08T23:59:00,281 Collecting uniprotmapper==0.0.3.dev0 2023-09-08T23:59:00,284 Created temporary directory: /tmp/pip-unpack-prbjgmoy 2023-09-08T23:59:00,497 Downloading uniprotmapper-0.0.3.dev0.tar.gz (2.7 kB) 2023-09-08T23:59:00,519 Added uniprotmapper==0.0.3.dev0 from https://files.pythonhosted.org/packages/f8/05/247ad1f674e35c290b1f56f4a8f4cb09a21df9109a734fc3017bb568e7af/uniprotmapper-0.0.3.dev0.tar.gz to build tracker '/tmp/pip-build-tracker-a0j6tbj4' 2023-09-08T23:59:00,521 Running setup.py (path:/tmp/pip-wheel-25nl_wks/uniprotmapper_9546e87b84a44859ac356b0899c7627f/setup.py) egg_info for package uniprotmapper 2023-09-08T23:59:00,521 Created temporary directory: /tmp/pip-pip-egg-info-fyndn1rq 2023-09-08T23:59:00,522 Preparing metadata (setup.py): started 2023-09-08T23:59:00,523 Running command python setup.py egg_info 2023-09-08T23:59:00,938 Traceback (most recent call last): 2023-09-08T23:59:00,939 File "", line 2, in 2023-09-08T23:59:00,940 File "", line 34, in 2023-09-08T23:59:00,941 File "/tmp/pip-wheel-25nl_wks/uniprotmapper_9546e87b84a44859ac356b0899c7627f/setup.py", line 2, in 2023-09-08T23:59:00,943 f=open("README.md", "r") 2023-09-08T23:59:00,944 ^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:59:00,944 FileNotFoundError: [Errno 2] No such file or directory: 'README.md' 2023-09-08T23:59:01,012 ERROR: [present-rich] python setup.py egg_info exited with 1 2023-09-08T23:59:01,025 [bold magenta]full command[/]: [blue]/usr/bin/python3 -c ' 2023-09-08T23:59:01,025 exec(compile('"'"''"'"''"'"' 2023-09-08T23:59:01,025 # This is -- a caller that pip uses to run setup.py 2023-09-08T23:59:01,025 # 2023-09-08T23:59:01,025 # - It imports setuptools before invoking setup.py, to enable projects that directly 2023-09-08T23:59:01,025 # import from `distutils.core` to work with newer packaging standards. 2023-09-08T23:59:01,025 # - It provides a clear error message when setuptools is not installed. 2023-09-08T23:59:01,025 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2023-09-08T23:59:01,025 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2023-09-08T23:59:01,025 # manifest_maker: standard file '"'"'-c'"'"' not found". 2023-09-08T23:59:01,025 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2023-09-08T23:59:01,025 import os, sys, tokenize 2023-09-08T23:59:01,025 2023-09-08T23:59:01,025 try: 2023-09-08T23:59:01,025 import setuptools 2023-09-08T23:59:01,025 except ImportError as error: 2023-09-08T23:59:01,025 print( 2023-09-08T23:59:01,025 "ERROR: Can not execute `setup.py` since setuptools is not available in " 2023-09-08T23:59:01,025 "the build environment.", 2023-09-08T23:59:01,025 file=sys.stderr, 2023-09-08T23:59:01,025 ) 2023-09-08T23:59:01,025 sys.exit(1) 2023-09-08T23:59:01,025 2023-09-08T23:59:01,025 __file__ = %r 2023-09-08T23:59:01,025 sys.argv[0] = __file__ 2023-09-08T23:59:01,025 2023-09-08T23:59:01,025 if os.path.exists(__file__): 2023-09-08T23:59:01,025 filename = __file__ 2023-09-08T23:59:01,025 with tokenize.open(__file__) as f: 2023-09-08T23:59:01,025 setup_py_code = f.read() 2023-09-08T23:59:01,025 else: 2023-09-08T23:59:01,025 filename = "" 2023-09-08T23:59:01,025 setup_py_code = "from setuptools import setup; setup()" 2023-09-08T23:59:01,025 2023-09-08T23:59:01,025 exec(compile(setup_py_code, filename, "exec")) 2023-09-08T23:59:01,025 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-25nl_wks/uniprotmapper_9546e87b84a44859ac356b0899c7627f/setup.py'"'"',), "", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-fyndn1rq[/] 2023-09-08T23:59:01,025 [bold magenta]cwd[/]: /tmp/pip-wheel-25nl_wks/uniprotmapper_9546e87b84a44859ac356b0899c7627f/ 2023-09-08T23:59:01,026 Preparing metadata (setup.py): finished with status 'error' 2023-09-08T23:59:01,028 ERROR: [present-rich] metadata generation failed 2023-09-08T23:59:01,033 Exception information: 2023-09-08T23:59:01,033 Traceback (most recent call last): 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata 2023-09-08T23:59:01,033 call_subprocess( 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess 2023-09-08T23:59:01,033 raise error 2023-09-08T23:59:01,033 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1 2023-09-08T23:59:01,033 2023-09-08T23:59:01,033 The above exception was the direct cause of the following exception: 2023-09-08T23:59:01,033 2023-09-08T23:59:01,033 Traceback (most recent call last): 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-09-08T23:59:01,033 status = run_func(*args) 2023-09-08T23:59:01,033 ^^^^^^^^^^^^^^^ 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-09-08T23:59:01,033 return func(self, options, args) 2023-09-08T23:59:01,033 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2023-09-08T23:59:01,033 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2023-09-08T23:59:01,033 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve 2023-09-08T23:59:01,033 result = self._result = resolver.resolve( 2023-09-08T23:59:01,033 ^^^^^^^^^^^^^^^^^ 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve 2023-09-08T23:59:01,033 state = resolution.resolve(requirements, max_rounds=max_rounds) 2023-09-08T23:59:01,033 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve 2023-09-08T23:59:01,033 self._add_to_criteria(self.state.criteria, r, parent=None) 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria 2023-09-08T23:59:01,033 if not criterion.candidates: 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__ 2023-09-08T23:59:01,033 return bool(self._sequence) 2023-09-08T23:59:01,033 ^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__ 2023-09-08T23:59:01,033 return any(self) 2023-09-08T23:59:01,033 ^^^^^^^^^ 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in 2023-09-08T23:59:01,033 return (c for c in iterator if id(c) not in self._incompatible_ids) 2023-09-08T23:59:01,033 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built 2023-09-08T23:59:01,033 candidate = func() 2023-09-08T23:59:01,033 ^^^^^^ 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link 2023-09-08T23:59:01,033 self._link_candidate_cache[link] = LinkCandidate( 2023-09-08T23:59:01,033 ^^^^^^^^^^^^^^ 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__ 2023-09-08T23:59:01,033 super().__init__( 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__ 2023-09-08T23:59:01,033 self.dist = self._prepare() 2023-09-08T23:59:01,033 ^^^^^^^^^^^^^^^ 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare 2023-09-08T23:59:01,033 dist = self._prepare_distribution() 2023-09-08T23:59:01,033 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution 2023-09-08T23:59:01,033 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2023-09-08T23:59:01,033 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement 2023-09-08T23:59:01,033 return self._prepare_linked_requirement(req, parallel_builds) 2023-09-08T23:59:01,033 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement 2023-09-08T23:59:01,033 dist = _get_prepared_distribution( 2023-09-08T23:59:01,033 ^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution 2023-09-08T23:59:01,033 abstract_dist.prepare_distribution_metadata( 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata 2023-09-08T23:59:01,033 self.req.prepare_metadata() 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata 2023-09-08T23:59:01,033 self.metadata_directory = generate_metadata_legacy( 2023-09-08T23:59:01,033 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T23:59:01,033 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata 2023-09-08T23:59:01,033 raise MetadataGenerationFailed(package_details=details) from error 2023-09-08T23:59:01,033 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2023-09-08T23:59:01,046 Removed uniprotmapper==0.0.3.dev0 from https://files.pythonhosted.org/packages/f8/05/247ad1f674e35c290b1f56f4a8f4cb09a21df9109a734fc3017bb568e7af/uniprotmapper-0.0.3.dev0.tar.gz from build tracker '/tmp/pip-build-tracker-a0j6tbj4' 2023-09-08T23:59:01,047 Removed build tracker: '/tmp/pip-build-tracker-a0j6tbj4'