2023-09-08T23:59:30,990 Created temporary directory: /tmp/pip-build-tracker-5elzv90t
2023-09-08T23:59:30,991 Initialized build tracking at /tmp/pip-build-tracker-5elzv90t
2023-09-08T23:59:30,992 Created build tracker: /tmp/pip-build-tracker-5elzv90t
2023-09-08T23:59:30,992 Entered build tracker: /tmp/pip-build-tracker-5elzv90t
2023-09-08T23:59:30,993 Created temporary directory: /tmp/pip-wheel-o_ohww9l
2023-09-08T23:59:30,996 Created temporary directory: /tmp/pip-ephem-wheel-cache-jqop6jy0
2023-09-08T23:59:31,019 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-08T23:59:31,023 2 location(s) to search for versions of pybedtools:
2023-09-08T23:59:31,023 * https://pypi.org/simple/pybedtools/
2023-09-08T23:59:31,023 * https://www.piwheels.org/simple/pybedtools/
2023-09-08T23:59:31,024 Fetching project page and analyzing links: https://pypi.org/simple/pybedtools/
2023-09-08T23:59:31,025 Getting page https://pypi.org/simple/pybedtools/
2023-09-08T23:59:31,026 Found index url https://pypi.org/simple/
2023-09-08T23:59:31,244 Fetched page https://pypi.org/simple/pybedtools/ as application/vnd.pypi.simple.v1+json
2023-09-08T23:59:31,251   Found link https://files.pythonhosted.org/packages/00/d9/aca9636b3e5b29f232fd6f60859f07f3420ec3c0712b50cb25c734a02a1f/pybedtools-0.2.2dev.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.2.2dev
2023-09-08T23:59:31,251   Found link https://files.pythonhosted.org/packages/44/19/a9bebb9eccd8d64d58202d5b3a151de81ffc7703a47503161b7615554703/pybedtools-0.5dev.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.5dev
2023-09-08T23:59:31,252   Found link https://files.pythonhosted.org/packages/e4/2f/e842c6b1165d706ebc62c931c11d4dfffe60e6b045ecf80eef7ea78d7afc/pybedtools-0.5rc1.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.5rc1
2023-09-08T23:59:31,253   Found link https://files.pythonhosted.org/packages/85/17/c89028c00537638629ca21be7f1b84e963fc8b63c1e9a5fda9884f86fb90/pybedtools-0.5.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.5
2023-09-08T23:59:31,254   Found link https://files.pythonhosted.org/packages/e7/9b/f082d2db470a0c9ba777a0d661fd5a7292c367840880040940de4a705e1f/pybedtools-0.5.5.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.5.5
2023-09-08T23:59:31,254   Found link https://files.pythonhosted.org/packages/3c/e7/365015ec8104195329635cb75ef745bff45d905271cd165f5048efaf48e3/pybedtools-0.6rc1.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.6rc1
2023-09-08T23:59:31,255   Found link https://files.pythonhosted.org/packages/04/ce/0e1480725fe80eb9a401f59e1bcc28fce721f6c2c5d7be233894d0154551/pybedtools-0.6.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.6
2023-09-08T23:59:31,256   Found link https://files.pythonhosted.org/packages/ac/25/c971ba83c6df08cbd17626339ec637df57a0aa409ba3042408ff349dd710/pybedtools-0.6.1.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.6.1
2023-09-08T23:59:31,257   Found link https://files.pythonhosted.org/packages/3e/71/cb09c7b874a87803f9fb9a9b679d02a82879b9cadca4c93756e05e65a439/pybedtools-0.6.2.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.6.2
2023-09-08T23:59:31,257   Found link https://files.pythonhosted.org/packages/28/0b/15291a1aac0a2a1eb814a0c883ccebf2eebaebbef9923bfa0444df0cb3a8/pybedtools-0.6.3.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.6.3
2023-09-08T23:59:31,258   Found link https://files.pythonhosted.org/packages/7a/12/73027be04fc57dd3340e2120f0148c0aca569b16e62333f32a40b2b06ee0/pybedtools-0.6.4.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.6.4
2023-09-08T23:59:31,259   Found link https://files.pythonhosted.org/packages/a4/98/dab963ff44ddd40849a01b145b6d769158d9794b979fdbfd173728e06e5b/pybedtools-0.6.5.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.6.5
2023-09-08T23:59:31,259   Found link https://files.pythonhosted.org/packages/a3/91/02e900caea18ee909665440727222a9f37c9a532170c52684123f07d6e21/pybedtools-0.6.6.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.6.6
2023-09-08T23:59:31,260   Found link https://files.pythonhosted.org/packages/af/ff/7d488b19b8e4109bbaf7b7e4c5dc53207f2c4354d7729cf73f17a79fa104/pybedtools-0.6.7.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.6.7
2023-09-08T23:59:31,261   Found link https://files.pythonhosted.org/packages/aa/e9/c92a7e58326bf76534af1fbd4074def6999130b1838b4dcc51e9f3ba5e17/pybedtools-0.6.8.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.6.8
2023-09-08T23:59:31,262   Found link https://files.pythonhosted.org/packages/79/20/2a0861cc9ffc41043efd814cdf860828f4b2213573c82ea6138eb6cb221b/pybedtools-0.6.9.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.6.9
2023-09-08T23:59:31,262   Found link https://files.pythonhosted.org/packages/e6/8d/06beb4e8a9e9a4ce042af337a5b855a789da586072d0c418ed9cb9398628/pybedtools-0.7.0.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.7.0
2023-09-08T23:59:31,263   Found link https://files.pythonhosted.org/packages/b5/1c/1b7e66668105e5b84cc6224a54ce552c6a6113e9b34c980fc436140e6be1/pybedtools-0.7.1.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.7.1
2023-09-08T23:59:31,263   Found link https://files.pythonhosted.org/packages/a2/43/d80dbf32da421c78ea84a386402e1840dd06f3aba7e5fe73e8134e1ce50a/pybedtools-0.7.4.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.7.4
2023-09-08T23:59:31,264   Found link https://files.pythonhosted.org/packages/ed/f1/2caa4dc57b62707f0df147c0820d1fc8565e439c5f5c86778df7a2fec59f/pybedtools-0.7.5.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.7.5
2023-09-08T23:59:31,264   Found link https://files.pythonhosted.org/packages/f4/49/ce7ccc0ad79189eb8b8eec170c350643e7a209f98e34dae239a954d6fdb0/pybedtools-0.7.6.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.7.6
2023-09-08T23:59:31,265   Found link https://files.pythonhosted.org/packages/c2/a6/29fd41e86b38e7ca39eb7818c422e927534f2bd324c34cfd411cfca203b0/pybedtools-0.7.7.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.7.7
2023-09-08T23:59:31,265   Found link https://files.pythonhosted.org/packages/2d/ee/aa19e50e03e06c817d00eadf8b56824b9e473da8c3e8ca3b33a11717ee6f/pybedtools-0.7.8.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.7.8
2023-09-08T23:59:31,266   Found link https://files.pythonhosted.org/packages/7c/66/8aecffd830eddbd05c1c3e737f87220cef9f2a8358f1d692f85b30269520/pybedtools-0.7.9.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.7.9
2023-09-08T23:59:31,266   Found link https://files.pythonhosted.org/packages/09/57/e7668e8644c60413be05b8cc9c23aaea3a0717b4025843d8c26b7c4822af/pybedtools-0.7.10.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.7.10
2023-09-08T23:59:31,267   Found link https://files.pythonhosted.org/packages/ca/b6/af143d5247cfe331e32c96ca92056293140eb8ce788d37842f6dcea734b4/pybedtools-0.8.0.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.8.0
2023-09-08T23:59:31,268   Found link https://files.pythonhosted.org/packages/bf/14/152220f39cda6b9b72810eeed103c6ec78422429adabe3aafc3eaf6feb40/pybedtools-0.8.1.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.8.1
2023-09-08T23:59:31,269   Found link https://files.pythonhosted.org/packages/5b/57/46e9c8135954550d1d3a05db5b0462a264239f7f71c78af304bb47c5c900/pybedtools-0.8.2.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.8.2
2023-09-08T23:59:31,269   Found link https://files.pythonhosted.org/packages/58/e2/410bb188b47582e2fd2f7176173b7b7bf46e122bb17fb4422552f4a6c604/pybedtools-0.9.0.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.9.0
2023-09-08T23:59:31,270   Found link https://files.pythonhosted.org/packages/38/00/f07c17e25f9cc8e2d22b30aace73733e275b1804196f744f0178012a0d16/pybedtools-0.9.1.tar.gz (from https://pypi.org/simple/pybedtools/), version: 0.9.1
2023-09-08T23:59:31,271 Fetching project page and analyzing links: https://www.piwheels.org/simple/pybedtools/
2023-09-08T23:59:31,271 Getting page https://www.piwheels.org/simple/pybedtools/
2023-09-08T23:59:31,273 Found index url https://www.piwheels.org/simple/
2023-09-08T23:59:31,549 Fetched page https://www.piwheels.org/simple/pybedtools/ as text/html
2023-09-08T23:59:31,574   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.9.1-cp39-cp39-linux_armv7l.whl#sha256=aac4ce2ebe92db07c21f083906878a68f16480f350569fd0e6765abad7cc0212 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,575   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.9.1-cp39-cp39-linux_armv6l.whl#sha256=aac4ce2ebe92db07c21f083906878a68f16480f350569fd0e6765abad7cc0212 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,576   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.9.1-cp37-cp37m-linux_armv7l.whl#sha256=c7f6b104f90209f3bba532c14d050fd36cf6dcb6a25866f1c57d2eb933853fd1 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,577   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.9.1-cp37-cp37m-linux_armv6l.whl#sha256=c7f6b104f90209f3bba532c14d050fd36cf6dcb6a25866f1c57d2eb933853fd1 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,577   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.9.0-cp39-cp39-linux_armv7l.whl#sha256=3c02b8607ef1c00a75a68c36b166b84888b4520947155806b468dee31f6fe065 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,578   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.9.0-cp39-cp39-linux_armv6l.whl#sha256=3c02b8607ef1c00a75a68c36b166b84888b4520947155806b468dee31f6fe065 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,578   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.9.0-cp37-cp37m-linux_armv7l.whl#sha256=79bc0a90018bbfd60276901e072ab165804d2ff5f8ad60fc24cd87fd4796ed32 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,579   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.9.0-cp37-cp37m-linux_armv6l.whl#sha256=79bc0a90018bbfd60276901e072ab165804d2ff5f8ad60fc24cd87fd4796ed32 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,580   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.9.0-cp35-cp35m-linux_armv7l.whl#sha256=eb4cf0816506d2cb8baec62d12acfce4105a47818e36316fc202cea4a1bebcff (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,580   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.9.0-cp35-cp35m-linux_armv6l.whl#sha256=eb4cf0816506d2cb8baec62d12acfce4105a47818e36316fc202cea4a1bebcff (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,581   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.2-cp39-cp39-linux_armv7l.whl#sha256=07a180e8ec94b79db1ecf18795ded10f9fafcb7586dd2ac3fc183059d9e20192 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,582   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.2-cp39-cp39-linux_armv6l.whl#sha256=07a180e8ec94b79db1ecf18795ded10f9fafcb7586dd2ac3fc183059d9e20192 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,583   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.2-cp37-cp37m-linux_armv7l.whl#sha256=fe412d87eeebb9a05dbdae0f5730b7722874602038420cc1802a5f7bfd21aaa9 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,583   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.2-cp37-cp37m-linux_armv6l.whl#sha256=fe412d87eeebb9a05dbdae0f5730b7722874602038420cc1802a5f7bfd21aaa9 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,584   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.2-cp35-cp35m-linux_armv7l.whl#sha256=282cbbf8e41d74ce886483a369858d3a07dd0de1e195b0342f6b9a7312e3b43d (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,585   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.2-cp35-cp35m-linux_armv6l.whl#sha256=282cbbf8e41d74ce886483a369858d3a07dd0de1e195b0342f6b9a7312e3b43d (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,586   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.1-cp39-cp39-linux_armv7l.whl#sha256=3e7766b5993aa9ac36aceacfa1e80ef13e5d9fb9a3820c15f4c1680393929f1d (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,586   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.1-cp39-cp39-linux_armv6l.whl#sha256=3e7766b5993aa9ac36aceacfa1e80ef13e5d9fb9a3820c15f4c1680393929f1d (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,587   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.1-cp35-cp35m-linux_armv7l.whl#sha256=8c33ac79af076bf58483627cf7d7e4bb5d76b3214a695335c9e21156cdb13885 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,588   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.1-cp35-cp35m-linux_armv6l.whl#sha256=8c33ac79af076bf58483627cf7d7e4bb5d76b3214a695335c9e21156cdb13885 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,588   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.1-cp34-cp34m-linux_armv6l.whl#sha256=ea1a8e0e4aa20ad4cc2567ce39857ab0d8a90edb67031434d956ac52360f441f (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,589   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.1-cp34-cp34m-linux_armv7l.whl#sha256=ea1a8e0e4aa20ad4cc2567ce39857ab0d8a90edb67031434d956ac52360f441f (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,590   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.1-cp37-cp37m-linux_armv6l.whl#sha256=0ee5a5a105c113f529af8fd039abbf4775b35d007315becdd315645369270e6d (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,590   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.1-cp37-cp37m-linux_armv7l.whl#sha256=0ee5a5a105c113f529af8fd039abbf4775b35d007315becdd315645369270e6d (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,591   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.0-cp37-cp37m-linux_armv6l.whl#sha256=ee1a206c84220ca1b4d10294ea3f59da5c4d7f7c0538ec4af577c690512abe2b (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,592   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.0-cp37-cp37m-linux_armv7l.whl#sha256=ee1a206c84220ca1b4d10294ea3f59da5c4d7f7c0538ec4af577c690512abe2b (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,593   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.0-cp35-cp35m-linux_armv7l.whl#sha256=ca8ca8831458cc02917e93095ee6b3b80499f3d59ec1288a02b7f12a0b77f337 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,593   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.0-cp35-cp35m-linux_armv6l.whl#sha256=ca8ca8831458cc02917e93095ee6b3b80499f3d59ec1288a02b7f12a0b77f337 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,594   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.0-cp34-cp34m-linux_armv6l.whl#sha256=1763a047ae734a7fae71bd79eb1d176a88b3913c3697cfdfcae92957b28852fc (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,595   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.8.0-cp34-cp34m-linux_armv7l.whl#sha256=1763a047ae734a7fae71bd79eb1d176a88b3913c3697cfdfcae92957b28852fc (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,596   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.10-cp34-cp34m-linux_armv6l.whl#sha256=87e83e73a28fed346080668f2a477fb08a6ca8bf3802640775026de54323b23c (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,596   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.10-cp34-cp34m-linux_armv7l.whl#sha256=87e83e73a28fed346080668f2a477fb08a6ca8bf3802640775026de54323b23c (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,597   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.10-cp35-cp35m-linux_armv6l.whl#sha256=2aa333ce8f980896690a87a06480996253427b69909920d39f0e36cfcc80f63c (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,597   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.10-cp35-cp35m-linux_armv7l.whl#sha256=2aa333ce8f980896690a87a06480996253427b69909920d39f0e36cfcc80f63c (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,598   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.9-cp35-cp35m-linux_armv7l.whl#sha256=a9d5b8d91e54f6a17c043f9b94f8fbf1671ef2895d07adb0154774d0428c9ab7 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,598   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.9-cp35-cp35m-linux_armv6l.whl#sha256=a9d5b8d91e54f6a17c043f9b94f8fbf1671ef2895d07adb0154774d0428c9ab7 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,599   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.9-cp34-cp34m-linux_armv6l.whl#sha256=3575f3ae35b6f3ac0a2361eeae3e7503b6fd3f93a38a4b49a514c5f26950970a (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,600   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.9-cp34-cp34m-linux_armv7l.whl#sha256=3575f3ae35b6f3ac0a2361eeae3e7503b6fd3f93a38a4b49a514c5f26950970a (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,601   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.8-cp35-cp35m-linux_armv6l.whl#sha256=8ae0bc12b1cd71f9d8866c5ee397347c3d4bb8eaf9c96d603cab7b9aedc54157 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,601   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.8-cp35-cp35m-linux_armv7l.whl#sha256=8ae0bc12b1cd71f9d8866c5ee397347c3d4bb8eaf9c96d603cab7b9aedc54157 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,602   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.8-cp34-cp34m-linux_armv6l.whl#sha256=94c5dc7c26654dc605f452c971f5dc9dee38169c1c5bbb16e62144e7c6161c1e (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,603   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.8-cp34-cp34m-linux_armv7l.whl#sha256=94c5dc7c26654dc605f452c971f5dc9dee38169c1c5bbb16e62144e7c6161c1e (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,604   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.7-cp34-cp34m-linux_armv6l.whl#sha256=e6f833d45535fe8386fe0fda09bca022a7da6f04721964403d287539df5d92ce (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,604   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.7-cp34-cp34m-linux_armv7l.whl#sha256=e6f833d45535fe8386fe0fda09bca022a7da6f04721964403d287539df5d92ce (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,605   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.7-cp35-cp35m-linux_armv6l.whl#sha256=32650659afa40f4f78715fb0c14b3c4d90557472919b58c66c01936bccc3bee3 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,605   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.7-cp35-cp35m-linux_armv7l.whl#sha256=32650659afa40f4f78715fb0c14b3c4d90557472919b58c66c01936bccc3bee3 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,606   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.6-cp34-cp34m-linux_armv6l.whl#sha256=c6fd88b52227c586bc801675c6035ec0cb14b6a7c83270b093f9d15f8374ac59 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,607   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.6-cp34-cp34m-linux_armv7l.whl#sha256=c6fd88b52227c586bc801675c6035ec0cb14b6a7c83270b093f9d15f8374ac59 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,607   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.6-cp35-cp35m-linux_armv6l.whl#sha256=255524aca6fa274e0c1586973432ad374dd4b7f648ba77dc3ac86eaf09fb464a (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,608   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.6-cp35-cp35m-linux_armv7l.whl#sha256=255524aca6fa274e0c1586973432ad374dd4b7f648ba77dc3ac86eaf09fb464a (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,608   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.5-cp35-cp35m-linux_armv6l.whl#sha256=980037bc7c774a4c03315f85c5a22209dc79103113d282b9dd4998a596430afa (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,609   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.5-cp35-cp35m-linux_armv7l.whl#sha256=980037bc7c774a4c03315f85c5a22209dc79103113d282b9dd4998a596430afa (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,610   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.5-cp34-cp34m-linux_armv6l.whl#sha256=f4f69611f6e31072cd229ea44ce4f5a95085886d5ed43a61bc34a7675c11dc86 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,610   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.5-cp34-cp34m-linux_armv7l.whl#sha256=f4f69611f6e31072cd229ea44ce4f5a95085886d5ed43a61bc34a7675c11dc86 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,611   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.4-cp35-cp35m-linux_armv7l.whl#sha256=21d579f8dc8be0696fe5705e2d390a6967babfed8601a444a6698e18908a54bf (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,612   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.4-cp35-cp35m-linux_armv6l.whl#sha256=21d579f8dc8be0696fe5705e2d390a6967babfed8601a444a6698e18908a54bf (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,612   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.4-cp34-cp34m-linux_armv6l.whl#sha256=0c918e20eb5fd94e0d90ca921bd2c023be4c2cdd9b8f4320a09ca791931cc2f9 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,613   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.4-cp34-cp34m-linux_armv7l.whl#sha256=0c918e20eb5fd94e0d90ca921bd2c023be4c2cdd9b8f4320a09ca791931cc2f9 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,614   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.1-cp34-cp34m-linux_armv6l.whl#sha256=0e95d8fa061476ac4d6f466d79e75d81a3da01e7f6747fc6725c1275b6201d9d (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,614   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.1-cp34-cp34m-linux_armv7l.whl#sha256=0e95d8fa061476ac4d6f466d79e75d81a3da01e7f6747fc6725c1275b6201d9d (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,615   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.1-cp35-cp35m-linux_armv7l.whl#sha256=da9cb927034371755a7f7294f2498d49b63a6549d77a30f3b5dc91db13be8352 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,616   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.1-cp35-cp35m-linux_armv6l.whl#sha256=da9cb927034371755a7f7294f2498d49b63a6549d77a30f3b5dc91db13be8352 (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,616   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.0-cp34-cp34m-linux_armv6l.whl#sha256=1101dc6f2f0a800dec0dbddcc707d40429bf6b5dbe42842ff61bb5850a63cc6c (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,617   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.0-cp34-cp34m-linux_armv7l.whl#sha256=1101dc6f2f0a800dec0dbddcc707d40429bf6b5dbe42842ff61bb5850a63cc6c (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,617   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.0-cp35-cp35m-linux_armv7l.whl#sha256=4a8563d567bdbcc4ae26db720acf3980bc4c63af83effdb6ca5e72145e8ddc6f (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,618   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.7.0-cp35-cp35m-linux_armv6l.whl#sha256=4a8563d567bdbcc4ae26db720acf3980bc4c63af83effdb6ca5e72145e8ddc6f (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,619   Skipping link: No binaries permitted for pybedtools: https://www.piwheels.org/simple/pybedtools/pybedtools-0.2.2.dev0-py3-none-any.whl#sha256=37efef7ea02a872e8d60cd34e5a36bd3e480eaccf7121bd8ac67647dd4550efc (from https://www.piwheels.org/simple/pybedtools/)
2023-09-08T23:59:31,620 Skipping link: not a file: https://www.piwheels.org/simple/pybedtools/
2023-09-08T23:59:31,621 Skipping link: not a file: https://pypi.org/simple/pybedtools/
2023-09-08T23:59:31,652 Given no hashes to check 1 links for project 'pybedtools': discarding no candidates
2023-09-08T23:59:31,679 Collecting pybedtools==0.7.8
2023-09-08T23:59:31,682   Created temporary directory: /tmp/pip-unpack-7sk41n8l
2023-09-08T23:59:31,912   Downloading pybedtools-0.7.8.tar.gz (14.5 MB)
2023-09-08T23:59:37,361   Added pybedtools==0.7.8 from https://files.pythonhosted.org/packages/2d/ee/aa19e50e03e06c817d00eadf8b56824b9e473da8c3e8ca3b33a11717ee6f/pybedtools-0.7.8.tar.gz to build tracker '/tmp/pip-build-tracker-5elzv90t'
2023-09-08T23:59:37,363   Running setup.py (path:/tmp/pip-wheel-o_ohww9l/pybedtools_76bcd47e70064d52bd0b2986452ae751/setup.py) egg_info for package pybedtools
2023-09-08T23:59:37,363   Created temporary directory: /tmp/pip-pip-egg-info-03odgen3
2023-09-08T23:59:37,364   Preparing metadata (setup.py): started
2023-09-08T23:59:37,366   Running command python setup.py egg_info
2023-09-08T23:59:37,824   /tmp/pip-wheel-o_ohww9l/pybedtools_76bcd47e70064d52bd0b2986452ae751/setup.py:25: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html
2023-09-08T23:59:37,825     import pkg_resources
2023-09-08T23:59:38,438   running egg_info
2023-09-08T23:59:38,439   creating /tmp/pip-pip-egg-info-03odgen3/pybedtools.egg-info
2023-09-08T23:59:38,462   writing /tmp/pip-pip-egg-info-03odgen3/pybedtools.egg-info/PKG-INFO
2023-09-08T23:59:38,466   writing dependency_links to /tmp/pip-pip-egg-info-03odgen3/pybedtools.egg-info/dependency_links.txt
2023-09-08T23:59:38,467   writing requirements to /tmp/pip-pip-egg-info-03odgen3/pybedtools.egg-info/requires.txt
2023-09-08T23:59:38,469   writing top-level names to /tmp/pip-pip-egg-info-03odgen3/pybedtools.egg-info/top_level.txt
2023-09-08T23:59:38,470   writing manifest file '/tmp/pip-pip-egg-info-03odgen3/pybedtools.egg-info/SOURCES.txt'
2023-09-08T23:59:38,561   reading manifest file '/tmp/pip-pip-egg-info-03odgen3/pybedtools.egg-info/SOURCES.txt'
2023-09-08T23:59:38,563   reading manifest template 'MANIFEST.in'
2023-09-08T23:59:38,789   warning: no previously-included files matching '__pycache__' found under directory '*'
2023-09-08T23:59:38,790   warning: no previously-included files matching '*.py[co]' found under directory '*'
2023-09-08T23:59:38,791   adding license file 'LICENSE.txt'
2023-09-08T23:59:38,802   writing manifest file '/tmp/pip-pip-egg-info-03odgen3/pybedtools.egg-info/SOURCES.txt'
2023-09-08T23:59:38,917   Preparing metadata (setup.py): finished with status 'done'
2023-09-08T23:59:38,921   Source in /tmp/pip-wheel-o_ohww9l/pybedtools_76bcd47e70064d52bd0b2986452ae751 has version 0.7.8, which satisfies requirement pybedtools==0.7.8 from https://files.pythonhosted.org/packages/2d/ee/aa19e50e03e06c817d00eadf8b56824b9e473da8c3e8ca3b33a11717ee6f/pybedtools-0.7.8.tar.gz
2023-09-08T23:59:38,922   Removed pybedtools==0.7.8 from https://files.pythonhosted.org/packages/2d/ee/aa19e50e03e06c817d00eadf8b56824b9e473da8c3e8ca3b33a11717ee6f/pybedtools-0.7.8.tar.gz from build tracker '/tmp/pip-build-tracker-5elzv90t'
2023-09-08T23:59:38,926 Created temporary directory: /tmp/pip-unpack-yph_aeop
2023-09-08T23:59:38,927 Created temporary directory: /tmp/pip-unpack-06mtt0x9
2023-09-08T23:59:38,932 Building wheels for collected packages: pybedtools
2023-09-08T23:59:38,936   Created temporary directory: /tmp/pip-wheel-_8ay8jio
2023-09-08T23:59:38,937   Building wheel for pybedtools (setup.py): started
2023-09-08T23:59:38,938   Destination directory: /tmp/pip-wheel-_8ay8jio
2023-09-08T23:59:38,939   Running command python setup.py bdist_wheel
2023-09-08T23:59:39,423   /tmp/pip-wheel-o_ohww9l/pybedtools_76bcd47e70064d52bd0b2986452ae751/setup.py:25: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html
2023-09-08T23:59:39,423     import pkg_resources
2023-09-08T23:59:40,020   running bdist_wheel
2023-09-08T23:59:40,044   The [wheel] section is deprecated. Use [bdist_wheel] instead.
2023-09-08T23:59:40,068   running build
2023-09-08T23:59:40,069   running build_py
2023-09-08T23:59:40,095   creating build
2023-09-08T23:59:40,096   creating build/lib.linux-armv7l-cpython-311
2023-09-08T23:59:40,096   creating build/lib.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,098   copying pybedtools/bedtool.py -> build/lib.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,102   copying pybedtools/stats.py -> build/lib.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,104   copying pybedtools/logger.py -> build/lib.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,106   copying pybedtools/settings.py -> build/lib.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,107   copying pybedtools/parallel.py -> build/lib.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,110   copying pybedtools/helpers.py -> build/lib.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,112   copying pybedtools/filenames.py -> build/lib.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,114   copying pybedtools/__main__.py -> build/lib.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,116   copying pybedtools/genome_registry.py -> build/lib.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,120   copying pybedtools/version.py -> build/lib.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,122   copying pybedtools/__init__.py -> build/lib.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,125   creating build/lib.linux-armv7l-cpython-311/pybedtools/test
2023-09-08T23:59:40,126   copying pybedtools/test/test_scripts.py -> build/lib.linux-armv7l-cpython-311/pybedtools/test
2023-09-08T23:59:40,128   copying pybedtools/test/test_gzip_support.py -> build/lib.linux-armv7l-cpython-311/pybedtools/test
2023-09-08T23:59:40,130   copying pybedtools/test/a.py -> build/lib.linux-armv7l-cpython-311/pybedtools/test
2023-09-08T23:59:40,132   copying pybedtools/test/tfuncs.py -> build/lib.linux-armv7l-cpython-311/pybedtools/test
2023-09-08T23:59:40,134   copying pybedtools/test/regression_tests.py -> build/lib.linux-armv7l-cpython-311/pybedtools/test
2023-09-08T23:59:40,136   copying pybedtools/test/test_contrib.py -> build/lib.linux-armv7l-cpython-311/pybedtools/test
2023-09-08T23:59:40,138   copying pybedtools/test/test_helpers.py -> build/lib.linux-armv7l-cpython-311/pybedtools/test
2023-09-08T23:59:40,140   copying pybedtools/test/test_cbedtools.py -> build/lib.linux-armv7l-cpython-311/pybedtools/test
2023-09-08T23:59:40,143   copying pybedtools/test/test_len_leak.py -> build/lib.linux-armv7l-cpython-311/pybedtools/test
2023-09-08T23:59:40,145   copying pybedtools/test/test1.py -> build/lib.linux-armv7l-cpython-311/pybedtools/test
2023-09-08T23:59:40,149   copying pybedtools/test/__init__.py -> build/lib.linux-armv7l-cpython-311/pybedtools/test
2023-09-08T23:59:40,151   copying pybedtools/test/test_iter.py -> build/lib.linux-armv7l-cpython-311/pybedtools/test
2023-09-08T23:59:40,154   creating build/lib.linux-armv7l-cpython-311/pybedtools/contrib
2023-09-08T23:59:40,155   copying pybedtools/contrib/intersection_matrix.py -> build/lib.linux-armv7l-cpython-311/pybedtools/contrib
2023-09-08T23:59:40,157   copying pybedtools/contrib/plotting.py -> build/lib.linux-armv7l-cpython-311/pybedtools/contrib
2023-09-08T23:59:40,160   copying pybedtools/contrib/venn_maker.py -> build/lib.linux-armv7l-cpython-311/pybedtools/contrib
2023-09-08T23:59:40,162   copying pybedtools/contrib/bigwig.py -> build/lib.linux-armv7l-cpython-311/pybedtools/contrib
2023-09-08T23:59:40,165   copying pybedtools/contrib/classifier.py -> build/lib.linux-armv7l-cpython-311/pybedtools/contrib
2023-09-08T23:59:40,167   copying pybedtools/contrib/bigbed.py -> build/lib.linux-armv7l-cpython-311/pybedtools/contrib
2023-09-08T23:59:40,169   copying pybedtools/contrib/long_range_interaction.py -> build/lib.linux-armv7l-cpython-311/pybedtools/contrib
2023-09-08T23:59:40,172   copying pybedtools/contrib/__init__.py -> build/lib.linux-armv7l-cpython-311/pybedtools/contrib
2023-09-08T23:59:40,175   creating build/lib.linux-armv7l-cpython-311/pybedtools/scripts
2023-09-08T23:59:40,176   copying pybedtools/scripts/intersection_matrix.py -> build/lib.linux-armv7l-cpython-311/pybedtools/scripts
2023-09-08T23:59:40,178   copying pybedtools/scripts/annotate.py -> build/lib.linux-armv7l-cpython-311/pybedtools/scripts
2023-09-08T23:59:40,181   copying pybedtools/scripts/intron_exon_reads.py -> build/lib.linux-armv7l-cpython-311/pybedtools/scripts
2023-09-08T23:59:40,183   copying pybedtools/scripts/venn_gchart.py -> build/lib.linux-armv7l-cpython-311/pybedtools/scripts
2023-09-08T23:59:40,185   copying pybedtools/scripts/peak_pie.py -> build/lib.linux-armv7l-cpython-311/pybedtools/scripts
2023-09-08T23:59:40,187   copying pybedtools/scripts/__init__.py -> build/lib.linux-armv7l-cpython-311/pybedtools/scripts
2023-09-08T23:59:40,189   copying pybedtools/scripts/venn_mpl.py -> build/lib.linux-armv7l-cpython-311/pybedtools/scripts
2023-09-08T23:59:40,192   copying pybedtools/scripts/py_ms_example.py -> build/lib.linux-armv7l-cpython-311/pybedtools/scripts
2023-09-08T23:59:40,194   creating build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,196   copying pybedtools/test/data/__init__.py -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,206   copying pybedtools/test/data/test.fa -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,208   copying pybedtools/test/data/test_peaks.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,210   copying pybedtools/test/data/Cp190_Mbn2_Bushey_2009.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,216   copying pybedtools/test/data/SuHw_Kc_Bushey_2009.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,220   copying pybedtools/test/data/reads.bam -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,222   copying pybedtools/test/data/1000genomes-example.vcf.gz -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,224   copying pybedtools/test/data/small.bam -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,227   copying pybedtools/test/data/small.fastq -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,229   copying pybedtools/test/data/rmsk.hg18.chr21.small.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,232   copying pybedtools/test/data/rmsk.hg18.chr21.small.bed.gz -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,235   copying pybedtools/test/data/BEAF_Mbn2_Bushey_2009.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,239   copying pybedtools/test/data/vcf-stderr-test.vcf -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,242   copying pybedtools/test/data/multibamcov_test.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,244   copying pybedtools/test/data/dm3-chr2L-5M-invalid.gff.gz -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,256   copying pybedtools/test/data/d.gff -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,258   copying pybedtools/test/data/mm9.bed12 -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,260   copying pybedtools/test/data/dm3 -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,263   copying pybedtools/test/data/gdc.bam -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,265   copying pybedtools/test/data/gdc.gff -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,267   copying pybedtools/test/data/gdc.sorted.bam -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,269   copying pybedtools/test/data/gdc.50.200.bam -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,272   copying pybedtools/test/data/hg38-base.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,274   copying pybedtools/test/data/y.bam -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,276   copying pybedtools/test/data/test.fa.fai -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,279   copying pybedtools/test/data/bedpe2.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,281   copying pybedtools/test/data/hg38-problem.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,283   copying pybedtools/test/data/gdc.50.200.bam.bai -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,286   copying pybedtools/test/data/x.bam -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,323   copying pybedtools/test/data/tag_test1.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,325   copying pybedtools/test/data/expand_test.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,327   copying pybedtools/test/data/vcf-stderr-test.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,329   copying pybedtools/test/data/gdc.1.100.bam -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,331   copying pybedtools/test/data/Cp190_Kc_Bushey_2009.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,336   copying pybedtools/test/data/gdc.1.100.bam.bai -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,338   copying pybedtools/test/data/democonfig.yaml -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,341   copying pybedtools/test/data/164.gtf -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,343   copying pybedtools/test/data/CTCF_Mbn2_Bushey_2009.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,346   copying pybedtools/test/data/gdc.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,348   copying pybedtools/test/data/SuHw_Mbn2_Bushey_2009.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,352   copying pybedtools/test/data/CTCF_Kc_Bushey_2009.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,355   copying pybedtools/test/data/b.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,357   copying pybedtools/test/data/m1.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,358   copying pybedtools/test/data/venn.b.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,361   copying pybedtools/test/data/snps.bed.gz -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,501   copying pybedtools/test/data/bedpe.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,503   copying pybedtools/test/data/exons.gff -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,505   copying pybedtools/test/data/issue_121.bam -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,507   copying pybedtools/test/data/gdc.gff.gz -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,509   copying pybedtools/test/data/a.igv_script -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,511   copying pybedtools/test/data/venn.c.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,513   copying pybedtools/test/data/dm3-chr2L-5M.gff.gz -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,521   copying pybedtools/test/data/x.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,559   copying pybedtools/test/data/1000genomes-example.vcf -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,561   copying pybedtools/test/data/a.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,563   copying pybedtools/test/data/v.vcf -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,565   copying pybedtools/test/data/hg19.gff -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,570   copying pybedtools/test/data/a.links.html -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,572   copying pybedtools/test/data/c.gff -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,575   copying pybedtools/test/data/test_tsses.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,577   copying pybedtools/test/data/gdc.sorted.bam.bai -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,579   copying pybedtools/test/data/BEAF_Kc_Bushey_2009.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,583   copying pybedtools/test/data/test_bedpe.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,585   copying pybedtools/test/data/tag_test2.bed -> build/lib.linux-armv7l-cpython-311/pybedtools/test/data
2023-09-08T23:59:40,587   copying pybedtools/_Window.pyx -> build/lib.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,589   copying pybedtools/cbedtools.pyx -> build/lib.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,592   copying pybedtools/featurefuncs.pyx -> build/lib.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,595   copying pybedtools/cbedtools.pxd -> build/lib.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,597   copying pybedtools/featurefuncs.cxx -> build/lib.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,605   copying pybedtools/cbedtools.cxx -> build/lib.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,622   copying pybedtools/_Window.c -> build/lib.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,631   running build_ext
2023-09-08T23:59:40,638   building 'pybedtools.cbedtools' extension
2023-09-08T23:59:40,638   creating build/temp.linux-armv7l-cpython-311
2023-09-08T23:59:40,639   creating build/temp.linux-armv7l-cpython-311/pybedtools
2023-09-08T23:59:40,640   creating build/temp.linux-armv7l-cpython-311/src
2023-09-08T23:59:40,640   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/ -I/usr/include/python3.11 -c pybedtools/cbedtools.cxx -o build/temp.linux-armv7l-cpython-311/pybedtools/cbedtools.o
2023-09-08T23:59:41,188   pybedtools/cbedtools.cxx:16304:12: fatal error: longintrepr.h: No such file or directory
2023-09-08T23:59:41,189   16304 |   #include "longintrepr.h"
2023-09-08T23:59:41,190         |            ^~~~~~~~~~~~~~~
2023-09-08T23:59:41,190   compilation terminated.
2023-09-08T23:59:41,195   error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1
2023-09-08T23:59:41,310   ERROR: [present-rich] python setup.py bdist_wheel exited with 1
2023-09-08T23:59:41,323   [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c '
2023-09-08T23:59:41,323   exec(compile('"'"''"'"''"'"'
2023-09-08T23:59:41,323   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-08T23:59:41,323   #
2023-09-08T23:59:41,323   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-08T23:59:41,323   #   import from `distutils.core` to work with newer packaging standards.
2023-09-08T23:59:41,323   # - It provides a clear error message when setuptools is not installed.
2023-09-08T23:59:41,323   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-08T23:59:41,323   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-08T23:59:41,323   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-08T23:59:41,323   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-08T23:59:41,323   import os, sys, tokenize
2023-09-08T23:59:41,323   
2023-09-08T23:59:41,323   try:
2023-09-08T23:59:41,323       import setuptools
2023-09-08T23:59:41,323   except ImportError as error:
2023-09-08T23:59:41,323       print(
2023-09-08T23:59:41,323           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-08T23:59:41,323           "the build environment.",
2023-09-08T23:59:41,323           file=sys.stderr,
2023-09-08T23:59:41,323       )
2023-09-08T23:59:41,323       sys.exit(1)
2023-09-08T23:59:41,323   
2023-09-08T23:59:41,323   __file__ = %r
2023-09-08T23:59:41,323   sys.argv[0] = __file__
2023-09-08T23:59:41,323   
2023-09-08T23:59:41,323   if os.path.exists(__file__):
2023-09-08T23:59:41,323       filename = __file__
2023-09-08T23:59:41,323       with tokenize.open(__file__) as f:
2023-09-08T23:59:41,323           setup_py_code = f.read()
2023-09-08T23:59:41,323   else:
2023-09-08T23:59:41,323       filename = "<auto-generated setuptools caller>"
2023-09-08T23:59:41,323       setup_py_code = "from setuptools import setup; setup()"
2023-09-08T23:59:41,323   
2023-09-08T23:59:41,323   exec(compile(setup_py_code, filename, "exec"))
2023-09-08T23:59:41,323   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-o_ohww9l/pybedtools_76bcd47e70064d52bd0b2986452ae751/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' bdist_wheel -d /tmp/pip-wheel-_8ay8jio[/]
2023-09-08T23:59:41,323   [bold magenta]cwd[/]: /tmp/pip-wheel-o_ohww9l/pybedtools_76bcd47e70064d52bd0b2986452ae751/
2023-09-08T23:59:41,324   Building wheel for pybedtools (setup.py): finished with status 'error'
2023-09-08T23:59:41,325   ERROR: Failed building wheel for pybedtools
2023-09-08T23:59:41,327   Running setup.py clean for pybedtools
2023-09-08T23:59:41,328   Running command python setup.py clean
2023-09-08T23:59:41,793   /tmp/pip-wheel-o_ohww9l/pybedtools_76bcd47e70064d52bd0b2986452ae751/setup.py:25: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html
2023-09-08T23:59:41,793     import pkg_resources
2023-09-08T23:59:42,378   running clean
2023-09-08T23:59:42,528 Failed to build pybedtools
2023-09-08T23:59:42,530 ERROR: Failed to build one or more wheels
2023-09-08T23:59:42,531 Exception information:
2023-09-08T23:59:42,531 Traceback (most recent call last):
2023-09-08T23:59:42,531   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-08T23:59:42,531     status = run_func(*args)
2023-09-08T23:59:42,531              ^^^^^^^^^^^^^^^
2023-09-08T23:59:42,531   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-08T23:59:42,531     return func(self, options, args)
2023-09-08T23:59:42,531            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-08T23:59:42,531   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 181, in run
2023-09-08T23:59:42,531     raise CommandError("Failed to build one or more wheels")
2023-09-08T23:59:42,531 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2023-09-08T23:59:42,534 Removed build tracker: '/tmp/pip-build-tracker-5elzv90t'