2023-09-09T03:29:20,158 Created temporary directory: /tmp/pip-build-tracker-15z_8ca5
2023-09-09T03:29:20,159 Initialized build tracking at /tmp/pip-build-tracker-15z_8ca5
2023-09-09T03:29:20,160 Created build tracker: /tmp/pip-build-tracker-15z_8ca5
2023-09-09T03:29:20,160 Entered build tracker: /tmp/pip-build-tracker-15z_8ca5
2023-09-09T03:29:20,161 Created temporary directory: /tmp/pip-wheel-0f4t12za
2023-09-09T03:29:20,164 Created temporary directory: /tmp/pip-ephem-wheel-cache-h5uftfva
2023-09-09T03:29:20,185 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-09T03:29:20,189 2 location(s) to search for versions of affbio:
2023-09-09T03:29:20,189 * https://pypi.org/simple/affbio/
2023-09-09T03:29:20,189 * https://www.piwheels.org/simple/affbio/
2023-09-09T03:29:20,190 Fetching project page and analyzing links: https://pypi.org/simple/affbio/
2023-09-09T03:29:20,191 Getting page https://pypi.org/simple/affbio/
2023-09-09T03:29:20,192 Found index url https://pypi.org/simple/
2023-09-09T03:29:20,330 Fetched page https://pypi.org/simple/affbio/ as application/vnd.pypi.simple.v1+json
2023-09-09T03:29:20,332   Found link https://files.pythonhosted.org/packages/18/a8/de36ba94d594a5f0f6d31673cba284e544707208a8e45abf7d74e13c5774/affbio-0.0.1.tar.gz (from https://pypi.org/simple/affbio/), version: 0.0.1
2023-09-09T03:29:20,333   Found link https://files.pythonhosted.org/packages/fc/f4/92c21f110954b5ef8eaf04f20047d06c053c61b5361a83b6385d3dac1181/affbio-0.0.4.tar.gz (from https://pypi.org/simple/affbio/), version: 0.0.4
2023-09-09T03:29:20,333   Found link https://files.pythonhosted.org/packages/b0/25/6a45c3aae9b5a979d06113ece51c6be8c015e555649329908c47ac378ec8/affbio-0.0.4.1.tar.gz (from https://pypi.org/simple/affbio/), version: 0.0.4.1
2023-09-09T03:29:20,334   Found link https://files.pythonhosted.org/packages/60/8f/0af12541638eec7a6010ed98e7c8a517407fbdb75ee3a6905ce8214a767a/affbio-0.0.4.3.tar.gz (from https://pypi.org/simple/affbio/), version: 0.0.4.3
2023-09-09T03:29:20,335 Fetching project page and analyzing links: https://www.piwheels.org/simple/affbio/
2023-09-09T03:29:20,335 Getting page https://www.piwheels.org/simple/affbio/
2023-09-09T03:29:20,337 Found index url https://www.piwheels.org/simple/
2023-09-09T03:29:20,602 Fetched page https://www.piwheels.org/simple/affbio/ as text/html
2023-09-09T03:29:20,606   Skipping link: No binaries permitted for affbio: https://www.piwheels.org/simple/affbio/affbio-0.0.4-py2.py3-none-any.whl#sha256=60160a6c64a10e343e8aa388981d5f8243bd79967efed80f2cf9b310927811ee (from https://www.piwheels.org/simple/affbio/)
2023-09-09T03:29:20,607   Skipping link: No binaries permitted for affbio: https://www.piwheels.org/simple/affbio/affbio-0.0.4.1-cp34-cp34m-linux_armv6l.whl#sha256=cbe10787217cad7a8d199e27157ab8645ec0713d60b7b75dda7844ef3df3a3f7 (from https://www.piwheels.org/simple/affbio/)
2023-09-09T03:29:20,608   Skipping link: No binaries permitted for affbio: https://www.piwheels.org/simple/affbio/affbio-0.0.4.1-cp34-cp34m-linux_armv7l.whl#sha256=cbe10787217cad7a8d199e27157ab8645ec0713d60b7b75dda7844ef3df3a3f7 (from https://www.piwheels.org/simple/affbio/)
2023-09-09T03:29:20,608   Skipping link: No binaries permitted for affbio: https://www.piwheels.org/simple/affbio/affbio-0.0.4.1-cp35-cp35m-linux_armv6l.whl#sha256=39eb5d6373c7775a7cda825bc5ed4b0a0a9a7973651f50153e654f84818e518b (from https://www.piwheels.org/simple/affbio/)
2023-09-09T03:29:20,609   Skipping link: No binaries permitted for affbio: https://www.piwheels.org/simple/affbio/affbio-0.0.4.1-cp35-cp35m-linux_armv7l.whl#sha256=39eb5d6373c7775a7cda825bc5ed4b0a0a9a7973651f50153e654f84818e518b (from https://www.piwheels.org/simple/affbio/)
2023-09-09T03:29:20,609   Skipping link: No binaries permitted for affbio: https://www.piwheels.org/simple/affbio/affbio-0.0.4.3-cp35-cp35m-linux_armv6l.whl#sha256=904af0ad04b48fb6b4e1a899010edca1f22609a9eb0e8acd82c5866d4d629b71 (from https://www.piwheels.org/simple/affbio/)
2023-09-09T03:29:20,610   Skipping link: No binaries permitted for affbio: https://www.piwheels.org/simple/affbio/affbio-0.0.4.3-cp35-cp35m-linux_armv7l.whl#sha256=904af0ad04b48fb6b4e1a899010edca1f22609a9eb0e8acd82c5866d4d629b71 (from https://www.piwheels.org/simple/affbio/)
2023-09-09T03:29:20,611   Skipping link: No binaries permitted for affbio: https://www.piwheels.org/simple/affbio/affbio-0.0.4.3-cp37-cp37m-linux_armv6l.whl#sha256=1672418cd93f038acd8a641b20303cd9b2e293b2edebf4e25e886f0f271da996 (from https://www.piwheels.org/simple/affbio/)
2023-09-09T03:29:20,611   Skipping link: No binaries permitted for affbio: https://www.piwheels.org/simple/affbio/affbio-0.0.4.3-cp37-cp37m-linux_armv7l.whl#sha256=1672418cd93f038acd8a641b20303cd9b2e293b2edebf4e25e886f0f271da996 (from https://www.piwheels.org/simple/affbio/)
2023-09-09T03:29:20,612   Skipping link: No binaries permitted for affbio: https://www.piwheels.org/simple/affbio/affbio-0.0.4.3-cp39-cp39-linux_armv6l.whl#sha256=64f765bd007b7f470b35c6020422442d70703d36523aa2ef4eefeed19e6950b2 (from https://www.piwheels.org/simple/affbio/)
2023-09-09T03:29:20,612   Skipping link: No binaries permitted for affbio: https://www.piwheels.org/simple/affbio/affbio-0.0.4.3-cp39-cp39-linux_armv7l.whl#sha256=64f765bd007b7f470b35c6020422442d70703d36523aa2ef4eefeed19e6950b2 (from https://www.piwheels.org/simple/affbio/)
2023-09-09T03:29:20,613 Skipping link: not a file: https://www.piwheels.org/simple/affbio/
2023-09-09T03:29:20,613 Skipping link: not a file: https://pypi.org/simple/affbio/
2023-09-09T03:29:20,631 Given no hashes to check 1 links for project 'affbio': discarding no candidates
2023-09-09T03:29:20,649 Collecting affbio==0.0.4.1
2023-09-09T03:29:20,652   Created temporary directory: /tmp/pip-unpack-c2utyypu
2023-09-09T03:29:20,863   Downloading affbio-0.0.4.1.tar.gz (31 kB)
2023-09-09T03:29:20,929   Added affbio==0.0.4.1 from https://files.pythonhosted.org/packages/b0/25/6a45c3aae9b5a979d06113ece51c6be8c015e555649329908c47ac378ec8/affbio-0.0.4.1.tar.gz to build tracker '/tmp/pip-build-tracker-15z_8ca5'
2023-09-09T03:29:20,931   Running setup.py (path:/tmp/pip-wheel-0f4t12za/affbio_0751a9aefc134535867a40278c69f2a6/setup.py) egg_info for package affbio
2023-09-09T03:29:20,932   Created temporary directory: /tmp/pip-pip-egg-info-i5df7l7o
2023-09-09T03:29:20,932   Preparing metadata (setup.py): started
2023-09-09T03:29:20,934   Running command python setup.py egg_info

2023-09-09T03:29:23,215   Error compiling Cython file:
2023-09-09T03:29:23,216   ------------------------------------------------------------
2023-09-09T03:29:23,216   ...
2023-09-09T03:29:23,217   #
2023-09-09T03:29:23,217   ^
2023-09-09T03:29:23,218   ------------------------------------------------------------

2023-09-09T03:29:23,220   affbio/lvc.pyx:1:0: 'affbio/lvc' is not a valid module name
2023-09-09T03:29:23,221   Traceback (most recent call last):
2023-09-09T03:29:23,222     File "<string>", line 2, in <module>
2023-09-09T03:29:23,223     File "<pip-setuptools-caller>", line 34, in <module>
2023-09-09T03:29:23,224     File "/tmp/pip-wheel-0f4t12za/affbio_0751a9aefc134535867a40278c69f2a6/setup.py", line 119, in <module>
2023-09-09T03:29:23,225       ext_modules=cythonize(extensions),
2023-09-09T03:29:23,226                   ^^^^^^^^^^^^^^^^^^^^^
2023-09-09T03:29:23,227     File "/usr/local/lib/python3.11/dist-packages/Cython/Build/Dependencies.py", line 1134, in cythonize
2023-09-09T03:29:23,228       cythonize_one(*args)
2023-09-09T03:29:23,228     File "/usr/local/lib/python3.11/dist-packages/Cython/Build/Dependencies.py", line 1301, in cythonize_one
2023-09-09T03:29:23,229       raise CompileError(None, pyx_file)
2023-09-09T03:29:23,230   Cython.Compiler.Errors.CompileError: affbio/lvc.pyx
2023-09-09T03:29:23,231   Compiling affbio/lvc.pyx because it changed.
2023-09-09T03:29:23,232   [1/1] Cythonizing affbio/lvc.pyx
2023-09-09T03:29:23,428   ERROR: [present-rich] python setup.py egg_info exited with 1
2023-09-09T03:29:23,441   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2023-09-09T03:29:23,441   exec(compile('"'"''"'"''"'"'
2023-09-09T03:29:23,441   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-09T03:29:23,441   #
2023-09-09T03:29:23,441   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-09T03:29:23,441   #   import from `distutils.core` to work with newer packaging standards.
2023-09-09T03:29:23,441   # - It provides a clear error message when setuptools is not installed.
2023-09-09T03:29:23,441   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-09T03:29:23,441   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-09T03:29:23,441   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-09T03:29:23,441   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-09T03:29:23,441   import os, sys, tokenize
2023-09-09T03:29:23,441   
2023-09-09T03:29:23,441   try:
2023-09-09T03:29:23,441       import setuptools
2023-09-09T03:29:23,441   except ImportError as error:
2023-09-09T03:29:23,441       print(
2023-09-09T03:29:23,441           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-09T03:29:23,441           "the build environment.",
2023-09-09T03:29:23,441           file=sys.stderr,
2023-09-09T03:29:23,441       )
2023-09-09T03:29:23,441       sys.exit(1)
2023-09-09T03:29:23,441   
2023-09-09T03:29:23,441   __file__ = %r
2023-09-09T03:29:23,441   sys.argv[0] = __file__
2023-09-09T03:29:23,441   
2023-09-09T03:29:23,441   if os.path.exists(__file__):
2023-09-09T03:29:23,441       filename = __file__
2023-09-09T03:29:23,441       with tokenize.open(__file__) as f:
2023-09-09T03:29:23,441           setup_py_code = f.read()
2023-09-09T03:29:23,441   else:
2023-09-09T03:29:23,441       filename = "<auto-generated setuptools caller>"
2023-09-09T03:29:23,441       setup_py_code = "from setuptools import setup; setup()"
2023-09-09T03:29:23,441   
2023-09-09T03:29:23,441   exec(compile(setup_py_code, filename, "exec"))
2023-09-09T03:29:23,441   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-0f4t12za/affbio_0751a9aefc134535867a40278c69f2a6/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-i5df7l7o[/]
2023-09-09T03:29:23,442   [bold magenta]cwd[/]: /tmp/pip-wheel-0f4t12za/affbio_0751a9aefc134535867a40278c69f2a6/
2023-09-09T03:29:23,443   Preparing metadata (setup.py): finished with status 'error'
2023-09-09T03:29:23,444 ERROR: [present-rich] metadata generation failed
2023-09-09T03:29:23,450 Exception information:
2023-09-09T03:29:23,450 Traceback (most recent call last):
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2023-09-09T03:29:23,450     call_subprocess(
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2023-09-09T03:29:23,450     raise error
2023-09-09T03:29:23,450 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2023-09-09T03:29:23,450 
2023-09-09T03:29:23,450 The above exception was the direct cause of the following exception:
2023-09-09T03:29:23,450 
2023-09-09T03:29:23,450 Traceback (most recent call last):
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-09T03:29:23,450     status = run_func(*args)
2023-09-09T03:29:23,450              ^^^^^^^^^^^^^^^
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-09T03:29:23,450     return func(self, options, args)
2023-09-09T03:29:23,450            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2023-09-09T03:29:23,450     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2023-09-09T03:29:23,450                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve
2023-09-09T03:29:23,450     result = self._result = resolver.resolve(
2023-09-09T03:29:23,450                             ^^^^^^^^^^^^^^^^^
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2023-09-09T03:29:23,450     state = resolution.resolve(requirements, max_rounds=max_rounds)
2023-09-09T03:29:23,450             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2023-09-09T03:29:23,450     self._add_to_criteria(self.state.criteria, r, parent=None)
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2023-09-09T03:29:23,450     if not criterion.candidates:
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2023-09-09T03:29:23,450     return bool(self._sequence)
2023-09-09T03:29:23,450            ^^^^^^^^^^^^^^^^^^^^
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2023-09-09T03:29:23,450     return any(self)
2023-09-09T03:29:23,450            ^^^^^^^^^
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2023-09-09T03:29:23,450     return (c for c in iterator if id(c) not in self._incompatible_ids)
2023-09-09T03:29:23,450            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2023-09-09T03:29:23,450     candidate = func()
2023-09-09T03:29:23,450                 ^^^^^^
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link
2023-09-09T03:29:23,450     self._link_candidate_cache[link] = LinkCandidate(
2023-09-09T03:29:23,450                                        ^^^^^^^^^^^^^^
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__
2023-09-09T03:29:23,450     super().__init__(
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
2023-09-09T03:29:23,450     self.dist = self._prepare()
2023-09-09T03:29:23,450                 ^^^^^^^^^^^^^^^
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare
2023-09-09T03:29:23,450     dist = self._prepare_distribution()
2023-09-09T03:29:23,450            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution
2023-09-09T03:29:23,450     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2023-09-09T03:29:23,450            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement
2023-09-09T03:29:23,450     return self._prepare_linked_requirement(req, parallel_builds)
2023-09-09T03:29:23,450            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement
2023-09-09T03:29:23,450     dist = _get_prepared_distribution(
2023-09-09T03:29:23,450            ^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution
2023-09-09T03:29:23,450     abstract_dist.prepare_distribution_metadata(
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata
2023-09-09T03:29:23,450     self.req.prepare_metadata()
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata
2023-09-09T03:29:23,450     self.metadata_directory = generate_metadata_legacy(
2023-09-09T03:29:23,450                               ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T03:29:23,450   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2023-09-09T03:29:23,450     raise MetadataGenerationFailed(package_details=details) from error
2023-09-09T03:29:23,450 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2023-09-09T03:29:23,463 Removed affbio==0.0.4.1 from https://files.pythonhosted.org/packages/b0/25/6a45c3aae9b5a979d06113ece51c6be8c015e555649329908c47ac378ec8/affbio-0.0.4.1.tar.gz from build tracker '/tmp/pip-build-tracker-15z_8ca5'
2023-09-09T03:29:23,464 Removed build tracker: '/tmp/pip-build-tracker-15z_8ca5'