2023-09-09T10:57:04,084 Created temporary directory: /tmp/pip-build-tracker-y_8fo12d
2023-09-09T10:57:04,085 Initialized build tracking at /tmp/pip-build-tracker-y_8fo12d
2023-09-09T10:57:04,085 Created build tracker: /tmp/pip-build-tracker-y_8fo12d
2023-09-09T10:57:04,086 Entered build tracker: /tmp/pip-build-tracker-y_8fo12d
2023-09-09T10:57:04,087 Created temporary directory: /tmp/pip-wheel-l6hbycaq
2023-09-09T10:57:04,090 Created temporary directory: /tmp/pip-ephem-wheel-cache-zih76jzx
2023-09-09T10:57:04,111 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-09T10:57:04,115 2 location(s) to search for versions of sygma:
2023-09-09T10:57:04,115 * https://pypi.org/simple/sygma/
2023-09-09T10:57:04,115 * https://www.piwheels.org/simple/sygma/
2023-09-09T10:57:04,116 Fetching project page and analyzing links: https://pypi.org/simple/sygma/
2023-09-09T10:57:04,116 Getting page https://pypi.org/simple/sygma/
2023-09-09T10:57:04,118 Found index url https://pypi.org/simple/
2023-09-09T10:57:04,361 Fetched page https://pypi.org/simple/sygma/ as application/vnd.pypi.simple.v1+json
2023-09-09T10:57:04,363   Found link https://files.pythonhosted.org/packages/ca/a9/f8ce3cc920fa5c0624734531ec487817453c831c25de54e2563f5fcd8103/SyGMa-1.0.tar.gz (from https://pypi.org/simple/sygma/), version: 1.0
2023-09-09T10:57:04,363   Found link https://files.pythonhosted.org/packages/62/9e/65b7fbb38f83e187d5af5db02ec7ae710b909644f6d7731ca5dd8ce13e2f/SyGMa-1.0.1.tar.gz (from https://pypi.org/simple/sygma/), version: 1.0.1
2023-09-09T10:57:04,364   Found link https://files.pythonhosted.org/packages/01/0d/7960ca6076d00ff33bf2aa0ac925074a07820900b8b8ae1edae83d12e488/SyGMa-1.1.0.tar.gz (from https://pypi.org/simple/sygma/), version: 1.1.0
2023-09-09T10:57:04,365 Fetching project page and analyzing links: https://www.piwheels.org/simple/sygma/
2023-09-09T10:57:04,365 Getting page https://www.piwheels.org/simple/sygma/
2023-09-09T10:57:04,367 Found index url https://www.piwheels.org/simple/
2023-09-09T10:57:04,671 Fetched page https://www.piwheels.org/simple/sygma/ as text/html
2023-09-09T10:57:04,672 Skipping link: not a file: https://www.piwheels.org/simple/sygma/
2023-09-09T10:57:04,673 Skipping link: not a file: https://pypi.org/simple/sygma/
2023-09-09T10:57:04,692 Given no hashes to check 1 links for project 'sygma': discarding no candidates
2023-09-09T10:57:04,710 Collecting sygma==1.0
2023-09-09T10:57:04,712   Created temporary directory: /tmp/pip-unpack-0oribbf6
2023-09-09T10:57:04,921   Downloading SyGMa-1.0.tar.gz (13 kB)
2023-09-09T10:57:04,958   Added sygma==1.0 from https://files.pythonhosted.org/packages/ca/a9/f8ce3cc920fa5c0624734531ec487817453c831c25de54e2563f5fcd8103/SyGMa-1.0.tar.gz to build tracker '/tmp/pip-build-tracker-y_8fo12d'
2023-09-09T10:57:04,960   Running setup.py (path:/tmp/pip-wheel-l6hbycaq/sygma_ff4f23c6922f47b885903b5b3ee7952c/setup.py) egg_info for package sygma
2023-09-09T10:57:04,961   Created temporary directory: /tmp/pip-pip-egg-info-hrs63jmq
2023-09-09T10:57:04,961   Preparing metadata (setup.py): started
2023-09-09T10:57:04,963   Running command python setup.py egg_info
2023-09-09T10:57:05,396   Traceback (most recent call last):
2023-09-09T10:57:05,396     File "/tmp/pip-wheel-l6hbycaq/sygma_ff4f23c6922f47b885903b5b3ee7952c/setup.py", line 14, in <module>
2023-09-09T10:57:05,397       from rdkit.Chem.inchi import INCHI_AVAILABLE
2023-09-09T10:57:05,398   ModuleNotFoundError: No module named 'rdkit'

2023-09-09T10:57:05,400   During handling of the above exception, another exception occurred:

2023-09-09T10:57:05,402   Traceback (most recent call last):
2023-09-09T10:57:05,403     File "<string>", line 2, in <module>
2023-09-09T10:57:05,404     File "<pip-setuptools-caller>", line 34, in <module>
2023-09-09T10:57:05,405     File "/tmp/pip-wheel-l6hbycaq/sygma_ff4f23c6922f47b885903b5b3ee7952c/setup.py", line 19, in <module>
2023-09-09T10:57:05,406       raise Exception('RDKit with INCHI support is required')
2023-09-09T10:57:05,407   Exception: RDKit with INCHI support is required
2023-09-09T10:57:05,469   ERROR: [present-rich] python setup.py egg_info exited with 1
2023-09-09T10:57:05,482   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2023-09-09T10:57:05,482   exec(compile('"'"''"'"''"'"'
2023-09-09T10:57:05,482   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-09T10:57:05,482   #
2023-09-09T10:57:05,482   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-09T10:57:05,482   #   import from `distutils.core` to work with newer packaging standards.
2023-09-09T10:57:05,482   # - It provides a clear error message when setuptools is not installed.
2023-09-09T10:57:05,482   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-09T10:57:05,482   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-09T10:57:05,482   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-09T10:57:05,482   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-09T10:57:05,482   import os, sys, tokenize
2023-09-09T10:57:05,482   
2023-09-09T10:57:05,482   try:
2023-09-09T10:57:05,482       import setuptools
2023-09-09T10:57:05,482   except ImportError as error:
2023-09-09T10:57:05,482       print(
2023-09-09T10:57:05,482           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-09T10:57:05,482           "the build environment.",
2023-09-09T10:57:05,482           file=sys.stderr,
2023-09-09T10:57:05,482       )
2023-09-09T10:57:05,482       sys.exit(1)
2023-09-09T10:57:05,482   
2023-09-09T10:57:05,482   __file__ = %r
2023-09-09T10:57:05,482   sys.argv[0] = __file__
2023-09-09T10:57:05,482   
2023-09-09T10:57:05,482   if os.path.exists(__file__):
2023-09-09T10:57:05,482       filename = __file__
2023-09-09T10:57:05,482       with tokenize.open(__file__) as f:
2023-09-09T10:57:05,482           setup_py_code = f.read()
2023-09-09T10:57:05,482   else:
2023-09-09T10:57:05,482       filename = "<auto-generated setuptools caller>"
2023-09-09T10:57:05,482       setup_py_code = "from setuptools import setup; setup()"
2023-09-09T10:57:05,482   
2023-09-09T10:57:05,482   exec(compile(setup_py_code, filename, "exec"))
2023-09-09T10:57:05,482   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-l6hbycaq/sygma_ff4f23c6922f47b885903b5b3ee7952c/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-hrs63jmq[/]
2023-09-09T10:57:05,483   [bold magenta]cwd[/]: /tmp/pip-wheel-l6hbycaq/sygma_ff4f23c6922f47b885903b5b3ee7952c/
2023-09-09T10:57:05,483   Preparing metadata (setup.py): finished with status 'error'
2023-09-09T10:57:05,485 ERROR: [present-rich] metadata generation failed
2023-09-09T10:57:05,490 Exception information:
2023-09-09T10:57:05,490 Traceback (most recent call last):
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2023-09-09T10:57:05,490     call_subprocess(
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2023-09-09T10:57:05,490     raise error
2023-09-09T10:57:05,490 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2023-09-09T10:57:05,490 
2023-09-09T10:57:05,490 The above exception was the direct cause of the following exception:
2023-09-09T10:57:05,490 
2023-09-09T10:57:05,490 Traceback (most recent call last):
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-09T10:57:05,490     status = run_func(*args)
2023-09-09T10:57:05,490              ^^^^^^^^^^^^^^^
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-09T10:57:05,490     return func(self, options, args)
2023-09-09T10:57:05,490            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2023-09-09T10:57:05,490     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2023-09-09T10:57:05,490                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve
2023-09-09T10:57:05,490     result = self._result = resolver.resolve(
2023-09-09T10:57:05,490                             ^^^^^^^^^^^^^^^^^
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2023-09-09T10:57:05,490     state = resolution.resolve(requirements, max_rounds=max_rounds)
2023-09-09T10:57:05,490             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2023-09-09T10:57:05,490     self._add_to_criteria(self.state.criteria, r, parent=None)
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2023-09-09T10:57:05,490     if not criterion.candidates:
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2023-09-09T10:57:05,490     return bool(self._sequence)
2023-09-09T10:57:05,490            ^^^^^^^^^^^^^^^^^^^^
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2023-09-09T10:57:05,490     return any(self)
2023-09-09T10:57:05,490            ^^^^^^^^^
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2023-09-09T10:57:05,490     return (c for c in iterator if id(c) not in self._incompatible_ids)
2023-09-09T10:57:05,490            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2023-09-09T10:57:05,490     candidate = func()
2023-09-09T10:57:05,490                 ^^^^^^
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link
2023-09-09T10:57:05,490     self._link_candidate_cache[link] = LinkCandidate(
2023-09-09T10:57:05,490                                        ^^^^^^^^^^^^^^
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__
2023-09-09T10:57:05,490     super().__init__(
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
2023-09-09T10:57:05,490     self.dist = self._prepare()
2023-09-09T10:57:05,490                 ^^^^^^^^^^^^^^^
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare
2023-09-09T10:57:05,490     dist = self._prepare_distribution()
2023-09-09T10:57:05,490            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution
2023-09-09T10:57:05,490     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2023-09-09T10:57:05,490            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement
2023-09-09T10:57:05,490     return self._prepare_linked_requirement(req, parallel_builds)
2023-09-09T10:57:05,490            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement
2023-09-09T10:57:05,490     dist = _get_prepared_distribution(
2023-09-09T10:57:05,490            ^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution
2023-09-09T10:57:05,490     abstract_dist.prepare_distribution_metadata(
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata
2023-09-09T10:57:05,490     self.req.prepare_metadata()
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata
2023-09-09T10:57:05,490     self.metadata_directory = generate_metadata_legacy(
2023-09-09T10:57:05,490                               ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T10:57:05,490   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2023-09-09T10:57:05,490     raise MetadataGenerationFailed(package_details=details) from error
2023-09-09T10:57:05,490 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2023-09-09T10:57:05,503 Removed sygma==1.0 from https://files.pythonhosted.org/packages/ca/a9/f8ce3cc920fa5c0624734531ec487817453c831c25de54e2563f5fcd8103/SyGMa-1.0.tar.gz from build tracker '/tmp/pip-build-tracker-y_8fo12d'
2023-09-09T10:57:05,504 Removed build tracker: '/tmp/pip-build-tracker-y_8fo12d'