2023-09-09T10:59:08,487 Created temporary directory: /tmp/pip-build-tracker-i22an8ns 2023-09-09T10:59:08,488 Initialized build tracking at /tmp/pip-build-tracker-i22an8ns 2023-09-09T10:59:08,489 Created build tracker: /tmp/pip-build-tracker-i22an8ns 2023-09-09T10:59:08,489 Entered build tracker: /tmp/pip-build-tracker-i22an8ns 2023-09-09T10:59:08,490 Created temporary directory: /tmp/pip-wheel-xa4ubr2k 2023-09-09T10:59:08,493 Created temporary directory: /tmp/pip-ephem-wheel-cache-_5uvtyus 2023-09-09T10:59:08,515 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-09T10:59:08,519 2 location(s) to search for versions of mikado: 2023-09-09T10:59:08,519 * https://pypi.org/simple/mikado/ 2023-09-09T10:59:08,519 * https://www.piwheels.org/simple/mikado/ 2023-09-09T10:59:08,520 Fetching project page and analyzing links: https://pypi.org/simple/mikado/ 2023-09-09T10:59:08,520 Getting page https://pypi.org/simple/mikado/ 2023-09-09T10:59:08,522 Found index url https://pypi.org/simple/ 2023-09-09T10:59:08,665 Fetched page https://pypi.org/simple/mikado/ as application/vnd.pypi.simple.v1+json 2023-09-09T10:59:08,671 Found link https://files.pythonhosted.org/packages/e0/9f/c6c5da77e4164c37427bc069d92e83c8269cdf779a43501403ae837a24b3/Mikado-1.0.0b5.post1.tar.gz (from https://pypi.org/simple/mikado/), version: 1.0.0b5.post1 2023-09-09T10:59:08,671 Found link https://files.pythonhosted.org/packages/8f/6c/ee9884cd930db5bfbee812ad1592a32127edbedf01cf28713eda06d5a9b1/Mikado-1.0.0b9.tar.gz (from https://pypi.org/simple/mikado/), version: 1.0.0b9 2023-09-09T10:59:08,672 Found link https://files.pythonhosted.org/packages/7d/c9/edc669907250923ca1113fa140d1965eb25691f57aaff891642d34aaf217/Mikado-1.0.0b10.tar.gz (from https://pypi.org/simple/mikado/), version: 1.0.0b10 2023-09-09T10:59:08,673 Found link https://files.pythonhosted.org/packages/69/15/3551e2856f041aefdd1505656aa8af26b1af04f8e1b4c0448f133724e1f4/Mikado-1.0.tar.gz (from https://pypi.org/simple/mikado/), version: 1.0 2023-09-09T10:59:08,673 Found link https://files.pythonhosted.org/packages/c2/b9/41d0a6f2ebad5eab5bc183beca8de854b4187266c6674ae6da0d86053f63/Mikado-1.1.tar.gz (from https://pypi.org/simple/mikado/), version: 1.1 2023-09-09T10:59:08,674 Found link https://files.pythonhosted.org/packages/40/3d/1158abded48d747b982a77c1badd0d718a174470cdecde82a313f3eb9d4f/Mikado-1.2.tar.gz (from https://pypi.org/simple/mikado/), version: 1.2 2023-09-09T10:59:08,675 Found link https://files.pythonhosted.org/packages/9a/07/5d0790de2c40a36826ac078bf4f7bf62e1fd5848411a784e7eef9fd673c4/Mikado-1.2.1.tar.gz (from https://pypi.org/simple/mikado/), version: 1.2.1 2023-09-09T10:59:08,675 Found link https://files.pythonhosted.org/packages/35/a8/73f0dfa3062e3744b27ba7dd4c0bfc6af9b23da38c4c0ce8c7d5b27b0757/Mikado-1.2.2.tar.gz (from https://pypi.org/simple/mikado/), version: 1.2.2 2023-09-09T10:59:08,676 Skipping link: No binaries permitted for mikado: https://files.pythonhosted.org/packages/f6/7f/d791fd6b5667bf18f4e167803a05fe5c389722ca954dea524259e08121e1/Mikado-1.2.4-cp36-cp36m-macosx_10_7_x86_64.whl (from https://pypi.org/simple/mikado/) 2023-09-09T10:59:08,677 Found link https://files.pythonhosted.org/packages/fc/2d/cc88561deaa5c1b4425855cd821253c68353ed787c7c63dc0f4ea155927e/Mikado-1.2.4.tar.gz (from https://pypi.org/simple/mikado/), version: 1.2.4 2023-09-09T10:59:08,677 Found link https://files.pythonhosted.org/packages/36/12/08d60892041a13f4bd13a486fb510844a8ed99961df828e7509e394904e6/Mikado-2.0rc1.tar.gz (from https://pypi.org/simple/mikado/), version: 2.0rc1 2023-09-09T10:59:08,678 Found link https://files.pythonhosted.org/packages/ba/bf/b9a01f43d67eacafe2deea77708497e8523b9cbc9c08d1da4bade64fdb99/Mikado-2.0rc2.tar.gz (from https://pypi.org/simple/mikado/), version: 2.0rc2 2023-09-09T10:59:08,679 Found link https://files.pythonhosted.org/packages/86/6d/f8b099f9637b38fd94c3f164f2c996765b579d2eae62cda48a04f108edb1/Mikado-2.0.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.0 2023-09-09T10:59:08,680 Found link https://files.pythonhosted.org/packages/2e/33/25f4ffb7a3fb20eb2d68ebbb4547dc7c2a26f6c5576a29cca8ba3981a753/Mikado-2.0.1.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.0.1 2023-09-09T10:59:08,681 Found link https://files.pythonhosted.org/packages/3a/6e/c589e961b797498aa99fe23634edda75166679cd2a381b0354a2d1d7b46f/Mikado-2.0.2.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.0.2 2023-09-09T10:59:08,682 Found link https://files.pythonhosted.org/packages/96/ff/815427acc6fb277fe387f6bf7509ad8e374be65f557bbf1f8c7741b21e02/Mikado-2.1.0.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.1.0 2023-09-09T10:59:08,683 Found link https://files.pythonhosted.org/packages/13/49/571306c6f821dc029a1cb70472498bd9d25525d126f2084798a774f9e4ce/Mikado-2.1.1.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.1.1 2023-09-09T10:59:08,684 Found link https://files.pythonhosted.org/packages/88/25/93f4d40e98702547602916000e9e8dee101c4e072c29306fcbf9cb6a0797/Mikado-2.2.0.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.2.0 2023-09-09T10:59:08,685 Found link https://files.pythonhosted.org/packages/f5/4a/ea11bafcbd376966836c1a70d6500fc63839fe529e8d103df8771057750a/Mikado-2.2.1.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.2.1 2023-09-09T10:59:08,685 Found link https://files.pythonhosted.org/packages/d0/ba/88df54116a8a68de82bd668d6fa2189d4a26045b7e0437cdc50bfccf7002/Mikado-2.2.2.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.2.2 2023-09-09T10:59:08,686 Found link https://files.pythonhosted.org/packages/28/dd/dec1ae4c7519971dc80a780dde045fce221adffba00535e3ff26de7c29ba/Mikado-2.2.3.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>=3.6), version: 2.2.3 2023-09-09T10:59:08,687 Found link https://files.pythonhosted.org/packages/26/c2/021f128fc8733aa031191d140d26c992a0f62dbd0f974913c7245f208bcf/Mikado-2.2.4.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.2.4 2023-09-09T10:59:08,688 Found link https://files.pythonhosted.org/packages/30/57/69347e6f46b8845741045f2782a5f59bd1a650167bb6be3ddbd38c8c73c5/Mikado-2.2.5.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.2.5 2023-09-09T10:59:08,689 Found link https://files.pythonhosted.org/packages/09/d8/c98c1549bcbb7f37b93d69625d4228b6b6a29a0676e9dece16e3a6061ff6/Mikado-2.3.0.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.0 2023-09-09T10:59:08,690 Found link https://files.pythonhosted.org/packages/8c/7c/70149e3cca2d6e50f302d7615728ecaade107420be6c7f6b52d2c89135b1/Mikado-2.3.1.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.1 2023-09-09T10:59:08,691 Found link https://files.pythonhosted.org/packages/d1/90/5867a6616f873700d9bd599edbfefe142307d1c0dcefb02f8106bed2794d/Mikado-2.3.2.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.2 2023-09-09T10:59:08,692 Found link https://files.pythonhosted.org/packages/37/09/898b9cc9c310317368a4a0a71f818fab51a1f7bea5eee895284036116321/Mikado-2.3.3.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.3 2023-09-09T10:59:08,692 Found link https://files.pythonhosted.org/packages/7c/53/cbd94a6419cb6b85fe392f5e82b2270567a7f3fd3cf381f54f9bd080d4b0/Mikado-2.3.4.tar.gz (from https://pypi.org/simple/mikado/) (requires-python:>3.6), version: 2.3.4 2023-09-09T10:59:08,693 Fetching project page and analyzing links: https://www.piwheels.org/simple/mikado/ 2023-09-09T10:59:08,694 Getting page https://www.piwheels.org/simple/mikado/ 2023-09-09T10:59:08,695 Found index url https://www.piwheels.org/simple/ 2023-09-09T10:59:08,966 Fetched page https://www.piwheels.org/simple/mikado/ as text/html 2023-09-09T10:59:08,995 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.4-cp39-cp39-linux_armv7l.whl#sha256=eae7460c0e91feef77b9891ab838d346e9149481f59d271ace65691fd3fab322 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:08,995 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.4-cp39-cp39-linux_armv6l.whl#sha256=eae7460c0e91feef77b9891ab838d346e9149481f59d271ace65691fd3fab322 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:08,996 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.4-cp37-cp37m-linux_armv7l.whl#sha256=d200ed2b907ce98c298ab164a11c61552acec54fed7a727d944b8744bc9c87a5 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:08,997 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.4-cp37-cp37m-linux_armv6l.whl#sha256=d200ed2b907ce98c298ab164a11c61552acec54fed7a727d944b8744bc9c87a5 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:08,997 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.3-cp39-cp39-linux_armv7l.whl#sha256=8ae20fd6fa9134eaf3b4216aafe499dd03d080f1338d465f819e529b9448178b (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:08,998 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.3-cp39-cp39-linux_armv6l.whl#sha256=8ae20fd6fa9134eaf3b4216aafe499dd03d080f1338d465f819e529b9448178b (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:08,998 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.3-cp37-cp37m-linux_armv7l.whl#sha256=b860c76dd2aff5fb774ebbede86a08d05ca2bcc32e188e0a8fc6b3392e132b55 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:08,999 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.3-cp37-cp37m-linux_armv6l.whl#sha256=b860c76dd2aff5fb774ebbede86a08d05ca2bcc32e188e0a8fc6b3392e132b55 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:08,999 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.2-cp39-cp39-linux_armv7l.whl#sha256=3ee48fa3d96deeb9e0a99617a0e99dca88fb69d47078393f8caa1f08fa35ce8a (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,000 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.2-cp39-cp39-linux_armv6l.whl#sha256=3ee48fa3d96deeb9e0a99617a0e99dca88fb69d47078393f8caa1f08fa35ce8a (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,001 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.2-cp37-cp37m-linux_armv7l.whl#sha256=0962ee8458a1d2c09e44acbf646c97dfbbaacb80b1cbc5e1e6546bc3175e9c6c (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,001 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.2-cp37-cp37m-linux_armv6l.whl#sha256=0962ee8458a1d2c09e44acbf646c97dfbbaacb80b1cbc5e1e6546bc3175e9c6c (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,002 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.1-cp39-cp39-linux_armv7l.whl#sha256=a38312d4ddc4abf2c34c1de984f3023e216cbaa455158a856480ae4d8e68c745 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,002 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.1-cp39-cp39-linux_armv6l.whl#sha256=a38312d4ddc4abf2c34c1de984f3023e216cbaa455158a856480ae4d8e68c745 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,003 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.1-cp37-cp37m-linux_armv7l.whl#sha256=fc848e6322df2e3611ca3722bcee0981f195f667bf874a7c6dcea0f9dc0ab731 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,003 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.1-cp37-cp37m-linux_armv6l.whl#sha256=fc848e6322df2e3611ca3722bcee0981f195f667bf874a7c6dcea0f9dc0ab731 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,004 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.0-cp39-cp39-linux_armv7l.whl#sha256=a041f4538b689653924bc0c7bdd03bb29fdda8143a60434de6e2d63aa67cd0c8 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,005 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.0-cp39-cp39-linux_armv6l.whl#sha256=a041f4538b689653924bc0c7bdd03bb29fdda8143a60434de6e2d63aa67cd0c8 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,005 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.0-cp37-cp37m-linux_armv7l.whl#sha256=4e8abcc783b98e290382b8ec0ee7f385c27700d5a9c1841a7bcae3ea507170a0 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,006 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.3.0-cp37-cp37m-linux_armv6l.whl#sha256=4e8abcc783b98e290382b8ec0ee7f385c27700d5a9c1841a7bcae3ea507170a0 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,006 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.5-cp39-cp39-linux_armv7l.whl#sha256=3f743cbc61207059885fe9a59589bf602a3f90a29738ac52092067a0e6422a50 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,007 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.5-cp39-cp39-linux_armv6l.whl#sha256=3f743cbc61207059885fe9a59589bf602a3f90a29738ac52092067a0e6422a50 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,007 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.5-cp37-cp37m-linux_armv7l.whl#sha256=5c409502210a8aefb7de44b86fb2ea2a309b92b91226e6b13d4d54725d171baf (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,008 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.5-cp37-cp37m-linux_armv6l.whl#sha256=5c409502210a8aefb7de44b86fb2ea2a309b92b91226e6b13d4d54725d171baf (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,009 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.4-cp39-cp39-linux_armv7l.whl#sha256=867f03bfe6e9cf06e29820272b9f451f30462c4287ebaebebe24b3ee358be321 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,009 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.4-cp39-cp39-linux_armv6l.whl#sha256=867f03bfe6e9cf06e29820272b9f451f30462c4287ebaebebe24b3ee358be321 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,010 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.4-cp37-cp37m-linux_armv7l.whl#sha256=0754ca2b8f81fbd6eb9ff228073ae59a24073e3f1b7b4ec29b0d65a71e0370a7 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,010 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.4-cp37-cp37m-linux_armv6l.whl#sha256=0754ca2b8f81fbd6eb9ff228073ae59a24073e3f1b7b4ec29b0d65a71e0370a7 (from https://www.piwheels.org/simple/mikado/) (requires-python:>3.6) 2023-09-09T10:59:09,011 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.3-cp39-cp39-linux_armv7l.whl#sha256=6ab7b92ed4d7a2e550425206bf76466c2a06204965e72e2a037d0619c1176c17 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,012 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.3-cp39-cp39-linux_armv6l.whl#sha256=6ab7b92ed4d7a2e550425206bf76466c2a06204965e72e2a037d0619c1176c17 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,012 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.3-cp37-cp37m-linux_armv7l.whl#sha256=0ca20e373c9e6bb78e52fcc63bd76ce297019dc0398a342552de37e05393ec0d (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,013 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.3-cp37-cp37m-linux_armv6l.whl#sha256=0ca20e373c9e6bb78e52fcc63bd76ce297019dc0398a342552de37e05393ec0d (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,013 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.2-cp39-cp39-linux_armv7l.whl#sha256=18d61b880f9e7c86198a1c220aae05e9fbd56142e74ddc764e4d81dbacbd4262 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,014 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.2-cp39-cp39-linux_armv6l.whl#sha256=18d61b880f9e7c86198a1c220aae05e9fbd56142e74ddc764e4d81dbacbd4262 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,014 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.2-cp37-cp37m-linux_armv7l.whl#sha256=54e4cff71242ce161025563618f5de554b9850f22a3ce8a78e500862c0b2a540 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,015 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.2-cp37-cp37m-linux_armv6l.whl#sha256=54e4cff71242ce161025563618f5de554b9850f22a3ce8a78e500862c0b2a540 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,015 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.1-cp39-cp39-linux_armv7l.whl#sha256=9e52828b40718524193ce4980512a419424cc7d9c9b9cb878e1cfde9c1632be4 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,016 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.1-cp39-cp39-linux_armv6l.whl#sha256=9e52828b40718524193ce4980512a419424cc7d9c9b9cb878e1cfde9c1632be4 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,017 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.1-cp37-cp37m-linux_armv7l.whl#sha256=4732efe3fe9ddae45033c30438b2f53c9e6a952a768a08e1b83574fb2b2eaf71 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,017 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.1-cp37-cp37m-linux_armv6l.whl#sha256=4732efe3fe9ddae45033c30438b2f53c9e6a952a768a08e1b83574fb2b2eaf71 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,018 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.0-cp39-cp39-linux_armv7l.whl#sha256=a037ee8af5e543296153555c58e9d0ccd04adf06ebcd075b18ce38e5d6b8d676 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,018 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.0-cp39-cp39-linux_armv6l.whl#sha256=a037ee8af5e543296153555c58e9d0ccd04adf06ebcd075b18ce38e5d6b8d676 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,019 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.0-cp37-cp37m-linux_armv7l.whl#sha256=b280f5816066e0f347dc78973f3dba49da227f44894dd596e0d1d8b968232fe7 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,020 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.2.0-cp37-cp37m-linux_armv6l.whl#sha256=b280f5816066e0f347dc78973f3dba49da227f44894dd596e0d1d8b968232fe7 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,020 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.1.1-cp39-cp39-linux_armv7l.whl#sha256=61e184cd3ae19e270db7a5e664830fc57ce3b8a2ce8029fe4f3e155e69861958 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,021 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.1.1-cp39-cp39-linux_armv6l.whl#sha256=61e184cd3ae19e270db7a5e664830fc57ce3b8a2ce8029fe4f3e155e69861958 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,021 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.1.1-cp37-cp37m-linux_armv7l.whl#sha256=e093885a6c7fe5089e2e326c23cdbfc9ab107892b45fc5c52c93f79679a4ae36 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,021 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.1.1-cp37-cp37m-linux_armv6l.whl#sha256=e093885a6c7fe5089e2e326c23cdbfc9ab107892b45fc5c52c93f79679a4ae36 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,022 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.1.0-cp39-cp39-linux_armv7l.whl#sha256=352b6d95b4ec9833a56b875166ebc51e217328dd6ee9d2740c8931ec1a1f5264 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,022 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.1.0-cp39-cp39-linux_armv6l.whl#sha256=352b6d95b4ec9833a56b875166ebc51e217328dd6ee9d2740c8931ec1a1f5264 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,023 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.1.0-cp37-cp37m-linux_armv7l.whl#sha256=be778cd02475c39684cfb175ac30600fee5c7512e3bd5272662fef6a9b28da73 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,024 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.1.0-cp37-cp37m-linux_armv6l.whl#sha256=be778cd02475c39684cfb175ac30600fee5c7512e3bd5272662fef6a9b28da73 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,024 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0.2-cp39-cp39-linux_armv7l.whl#sha256=d470f2f06b5088be5229fff70d2f2453c550acccfed8693854613b383c3c2ceb (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,025 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0.2-cp39-cp39-linux_armv6l.whl#sha256=d470f2f06b5088be5229fff70d2f2453c550acccfed8693854613b383c3c2ceb (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,025 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0.2-cp37-cp37m-linux_armv7l.whl#sha256=2f415150126f13a761de3741431aeeeedc7de2714bf481b1082993ad77d07529 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,026 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0.2-cp37-cp37m-linux_armv6l.whl#sha256=2f415150126f13a761de3741431aeeeedc7de2714bf481b1082993ad77d07529 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,026 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0.1-cp39-cp39-linux_armv7l.whl#sha256=650d6cccd0d2d54620080fd88477dcf0ecefa34f7f65887febc654a9daee6938 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,027 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0.1-cp39-cp39-linux_armv6l.whl#sha256=650d6cccd0d2d54620080fd88477dcf0ecefa34f7f65887febc654a9daee6938 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,028 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0.1-cp37-cp37m-linux_armv7l.whl#sha256=aa58f4246ed233041f1947ffec596fd5ddb6bd53113d31be9b6e2c82d87a3554 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,028 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0.1-cp37-cp37m-linux_armv6l.whl#sha256=aa58f4246ed233041f1947ffec596fd5ddb6bd53113d31be9b6e2c82d87a3554 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,029 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0-cp39-cp39-linux_armv7l.whl#sha256=399cb00521dc1062b7b0535806775c86408f5775694ca44fe7d9a16d1c7fea93 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,029 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0-cp39-cp39-linux_armv6l.whl#sha256=399cb00521dc1062b7b0535806775c86408f5775694ca44fe7d9a16d1c7fea93 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,030 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0-cp37-cp37m-linux_armv7l.whl#sha256=1e80b759b92747d5f87ec97c0d322d8991785bb8da683d2ca0a3a3585f09d139 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,030 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0-cp37-cp37m-linux_armv6l.whl#sha256=1e80b759b92747d5f87ec97c0d322d8991785bb8da683d2ca0a3a3585f09d139 (from https://www.piwheels.org/simple/mikado/) (requires-python:>=3.6) 2023-09-09T10:59:09,031 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0rc2-cp39-cp39-linux_armv7l.whl#sha256=27d920e52482eb28c4c4915cd13022c57b6a2e9b24ab9cbb9c6fb84a57c86006 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,031 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0rc2-cp39-cp39-linux_armv6l.whl#sha256=27d920e52482eb28c4c4915cd13022c57b6a2e9b24ab9cbb9c6fb84a57c86006 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,032 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0rc2-cp35-cp35m-linux_armv6l.whl#sha256=88943d4573209fd7d3a4b821cb8f94e1343b4eafa6afaf34ac17961eb43b1dff (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,033 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0rc2-cp35-cp35m-linux_armv7l.whl#sha256=88943d4573209fd7d3a4b821cb8f94e1343b4eafa6afaf34ac17961eb43b1dff (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,033 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0rc2-cp37-cp37m-linux_armv6l.whl#sha256=f33058d38476176600e2e3cfdbbb028e98d0f62fa1bc7513f0e74bf6fc9668c1 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,034 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0rc2-cp37-cp37m-linux_armv7l.whl#sha256=f33058d38476176600e2e3cfdbbb028e98d0f62fa1bc7513f0e74bf6fc9668c1 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,034 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0rc1-cp39-cp39-linux_armv7l.whl#sha256=91ac0dfdc5145f7ac98064d92c6cc7a27c9737695bee341d5ccd4dd84778da0a (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,035 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0rc1-cp39-cp39-linux_armv6l.whl#sha256=91ac0dfdc5145f7ac98064d92c6cc7a27c9737695bee341d5ccd4dd84778da0a (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,036 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0rc1-cp35-cp35m-linux_armv7l.whl#sha256=f0c146400dbcde6c6b2b4691d3519ee99863e2f9a5a53473bb658567431c4e58 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,036 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0rc1-cp35-cp35m-linux_armv6l.whl#sha256=f0c146400dbcde6c6b2b4691d3519ee99863e2f9a5a53473bb658567431c4e58 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,036 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0rc1-cp37-cp37m-linux_armv7l.whl#sha256=4c7691d7cd8ce61164a13e3da86b2d4637c36014b90f25216924a8b9f07290cc (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,037 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-2.0rc1-cp37-cp37m-linux_armv6l.whl#sha256=4c7691d7cd8ce61164a13e3da86b2d4637c36014b90f25216924a8b9f07290cc (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,037 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2.4-cp34-cp34m-linux_armv7l.whl#sha256=013fe7312e89e4ef0a1cefc59efd6deded6fe09a82e2684638461eefc0d15cec (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,038 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2.4-cp34-cp34m-linux_armv6l.whl#sha256=013fe7312e89e4ef0a1cefc59efd6deded6fe09a82e2684638461eefc0d15cec (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,038 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2.4-cp35-cp35m-linux_armv6l.whl#sha256=70805f9e31cbe895eb764eccf40b81eb7dbc61a65ff199ddbefdebde920c1447 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,039 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2.4-cp35-cp35m-linux_armv7l.whl#sha256=70805f9e31cbe895eb764eccf40b81eb7dbc61a65ff199ddbefdebde920c1447 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,040 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2.4-cp37-cp37m-linux_armv6l.whl#sha256=8a63835167df1009a262783fca90ce25f88aad46ebf235820d7f21cea9e27926 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,040 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2.4-cp37-cp37m-linux_armv7l.whl#sha256=8a63835167df1009a262783fca90ce25f88aad46ebf235820d7f21cea9e27926 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,041 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2.2-cp35-cp35m-linux_armv7l.whl#sha256=6e1e51e81057df0e2d693c84b108c9fc11c0b43b8f11118797d73d7838a9eb6d (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,041 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2.2-cp35-cp35m-linux_armv6l.whl#sha256=6e1e51e81057df0e2d693c84b108c9fc11c0b43b8f11118797d73d7838a9eb6d (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,042 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2.2-cp37-cp37m-linux_armv6l.whl#sha256=61a7b7c61f8476136a43f64ff77f3eedf70a72ac480343a833472539bb9be86a (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,043 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2.2-cp37-cp37m-linux_armv7l.whl#sha256=61a7b7c61f8476136a43f64ff77f3eedf70a72ac480343a833472539bb9be86a (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,043 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2.1-cp34-cp34m-linux_armv6l.whl#sha256=6302e3b12807435d38dfd802e1b8dc983feb6cea1b55db4e480aec539a5f85bc (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,044 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2.1-cp34-cp34m-linux_armv7l.whl#sha256=6302e3b12807435d38dfd802e1b8dc983feb6cea1b55db4e480aec539a5f85bc (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,044 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2.1-cp35-cp35m-linux_armv7l.whl#sha256=a39e49d25153534bd5c1e6574e84ed72e6814b12ed39527b7e329221e6f1b13d (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,045 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2.1-cp35-cp35m-linux_armv6l.whl#sha256=a39e49d25153534bd5c1e6574e84ed72e6814b12ed39527b7e329221e6f1b13d (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,045 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2.1-cp37-cp37m-linux_armv7l.whl#sha256=a2910227f92bec48ad32c61c404cd1b8637bede7fbd684ae3d64df57bbe5ac7b (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,045 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2.1-cp37-cp37m-linux_armv6l.whl#sha256=a2910227f92bec48ad32c61c404cd1b8637bede7fbd684ae3d64df57bbe5ac7b (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,046 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2-cp35-cp35m-linux_armv6l.whl#sha256=dae54e57e5b7f3185e90e47fa278840a38f8c98d49a7a337b29951bec33ece13 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,047 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2-cp35-cp35m-linux_armv7l.whl#sha256=dae54e57e5b7f3185e90e47fa278840a38f8c98d49a7a337b29951bec33ece13 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,047 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2-cp34-cp34m-linux_armv7l.whl#sha256=4bb34a1ae37485284a0661c2a6a7f1094636a0372a859dcd87d7c0aad94c91cd (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,048 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2-cp34-cp34m-linux_armv6l.whl#sha256=4bb34a1ae37485284a0661c2a6a7f1094636a0372a859dcd87d7c0aad94c91cd (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,049 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2-cp37-cp37m-linux_armv7l.whl#sha256=5a5abadadc716ff22023b6f44b03a9e8049fac6667df41dbf611f0597708a9b7 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,049 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.2-cp37-cp37m-linux_armv6l.whl#sha256=5a5abadadc716ff22023b6f44b03a9e8049fac6667df41dbf611f0597708a9b7 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,050 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.1-cp34-cp34m-linux_armv7l.whl#sha256=ad148a2be64148656d9fd55c8a2767fb7b93b5c4f225dd7f44bc45c779afe4ca (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,050 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.1-cp34-cp34m-linux_armv6l.whl#sha256=ad148a2be64148656d9fd55c8a2767fb7b93b5c4f225dd7f44bc45c779afe4ca (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,051 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.1-cp35-cp35m-linux_armv7l.whl#sha256=15e4b722560a6b03960c443290d2e84fc46dfb6eef983541141cec45292a850e (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,052 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.1-cp35-cp35m-linux_armv6l.whl#sha256=15e4b722560a6b03960c443290d2e84fc46dfb6eef983541141cec45292a850e (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,052 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.0-cp35-cp35m-linux_armv6l.whl#sha256=a8d63c41eb54392f132fadff33c5b18e9f67778562711eb50caa98dcbe7f1f84 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,053 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.0-cp35-cp35m-linux_armv7l.whl#sha256=a8d63c41eb54392f132fadff33c5b18e9f67778562711eb50caa98dcbe7f1f84 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,053 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.0.0b10-cp35-cp35m-linux_armv6l.whl#sha256=5efcb4a1b4a9e814f31e3ac913e4debb0c7eb4eb35328f9c1a7044a7d919efdc (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,053 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.0.0b10-cp35-cp35m-linux_armv7l.whl#sha256=5efcb4a1b4a9e814f31e3ac913e4debb0c7eb4eb35328f9c1a7044a7d919efdc (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,054 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.0.0b9-cp35-cp35m-linux_armv6l.whl#sha256=20c5fe322f4783bf164ebe1856a68d1f05890b4df93d62a91e5a403942d99a08 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,054 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.0.0b9-cp35-cp35m-linux_armv7l.whl#sha256=20c5fe322f4783bf164ebe1856a68d1f05890b4df93d62a91e5a403942d99a08 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,055 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp311-cp311-linux_armv7l.whl#sha256=bf8598c676e5ac37decb6a90621ec401e89b7791374e961d544d8f1a924a317e (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,056 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp311-cp311-linux_armv6l.whl#sha256=bf8598c676e5ac37decb6a90621ec401e89b7791374e961d544d8f1a924a317e (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,056 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp35-cp35m-linux_armv6l.whl#sha256=e42650c477a2db9d73486fb0c1ea7183280ccd2d216a8994a4620148d1208b6b (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,057 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp35-cp35m-linux_armv7l.whl#sha256=e42650c477a2db9d73486fb0c1ea7183280ccd2d216a8994a4620148d1208b6b (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,057 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp37-cp37m-linux_armv6l.whl#sha256=ad15eb4f2ea89eef0f6fdfacdacafc0005a9554e350cc2e9da31cc8512dfdb15 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,058 Skipping link: No binaries permitted for mikado: https://www.piwheels.org/simple/mikado/Mikado-1.0.0b5.post1-cp37-cp37m-linux_armv7l.whl#sha256=ad15eb4f2ea89eef0f6fdfacdacafc0005a9554e350cc2e9da31cc8512dfdb15 (from https://www.piwheels.org/simple/mikado/) 2023-09-09T10:59:09,058 Skipping link: not a file: https://www.piwheels.org/simple/mikado/ 2023-09-09T10:59:09,059 Skipping link: not a file: https://pypi.org/simple/mikado/ 2023-09-09T10:59:09,081 Given no hashes to check 1 links for project 'mikado': discarding no candidates 2023-09-09T10:59:09,099 Collecting mikado==1.0.0b9 2023-09-09T10:59:09,101 Created temporary directory: /tmp/pip-unpack-qxqdsxl7 2023-09-09T10:59:09,556 Downloading Mikado-1.0.0b9.tar.gz (16.8 MB) 2023-09-09T10:59:14,069 Added mikado==1.0.0b9 from https://files.pythonhosted.org/packages/8f/6c/ee9884cd930db5bfbee812ad1592a32127edbedf01cf28713eda06d5a9b1/Mikado-1.0.0b9.tar.gz to build tracker '/tmp/pip-build-tracker-i22an8ns' 2023-09-09T10:59:14,070 Running setup.py (path:/tmp/pip-wheel-xa4ubr2k/mikado_4efde69a635e41fd8aee8c56200c3f12/setup.py) egg_info for package mikado 2023-09-09T10:59:14,071 Created temporary directory: /tmp/pip-pip-egg-info-rt1f1z0t 2023-09-09T10:59:14,071 Preparing metadata (setup.py): started 2023-09-09T10:59:14,073 Running command python setup.py egg_info 2023-09-09T10:59:16,249 /usr/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-xa4ubr2k/mikado_4efde69a635e41fd8aee8c56200c3f12/Mikado/scales/contrast.pxd 2023-09-09T10:59:16,249 tree = Parsing.p_module(s, pxd, full_module_name) 2023-09-09T10:59:17,069 /usr/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-xa4ubr2k/mikado_4efde69a635e41fd8aee8c56200c3f12/Mikado/scales/f1.pxd 2023-09-09T10:59:17,070 tree = Parsing.p_module(s, pxd, full_module_name) 2023-09-09T10:59:17,155 /usr/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-xa4ubr2k/mikado_4efde69a635e41fd8aee8c56200c3f12/Mikado/utilities/intervaltree.pyx 2023-09-09T10:59:17,156 tree = Parsing.p_module(s, pxd, full_module_name) 2023-09-09T10:59:18,123 /usr/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-xa4ubr2k/mikado_4efde69a635e41fd8aee8c56200c3f12/Mikado/utilities/overlap.pxd 2023-09-09T10:59:18,124 tree = Parsing.p_module(s, pxd, full_module_name) 2023-09-09T10:59:18,239 Compiling Mikado/utilities/overlap.pyx because it changed. 2023-09-09T10:59:18,241 Compiling Mikado/scales/f1.pyx because it changed. 2023-09-09T10:59:18,242 Compiling Mikado/scales/contrast.pyx because it changed. 2023-09-09T10:59:18,244 Compiling Mikado/utilities/intervaltree.pyx because it changed. 2023-09-09T10:59:18,246 [1/4] Cythonizing Mikado/scales/contrast.pyx 2023-09-09T10:59:18,248 [2/4] Cythonizing Mikado/scales/f1.pyx 2023-09-09T10:59:18,249 [3/4] Cythonizing Mikado/utilities/intervaltree.pyx 2023-09-09T10:59:18,251 [4/4] Cythonizing Mikado/utilities/overlap.pyx 2023-09-09T10:59:18,754 running egg_info 2023-09-09T10:59:18,755 creating /tmp/pip-pip-egg-info-rt1f1z0t/Mikado.egg-info 2023-09-09T10:59:18,779 writing /tmp/pip-pip-egg-info-rt1f1z0t/Mikado.egg-info/PKG-INFO 2023-09-09T10:59:18,784 writing dependency_links to /tmp/pip-pip-egg-info-rt1f1z0t/Mikado.egg-info/dependency_links.txt 2023-09-09T10:59:18,785 writing entry points to /tmp/pip-pip-egg-info-rt1f1z0t/Mikado.egg-info/entry_points.txt 2023-09-09T10:59:18,788 writing requirements to /tmp/pip-pip-egg-info-rt1f1z0t/Mikado.egg-info/requires.txt 2023-09-09T10:59:18,789 writing top-level names to /tmp/pip-pip-egg-info-rt1f1z0t/Mikado.egg-info/top_level.txt 2023-09-09T10:59:18,790 writing manifest file '/tmp/pip-pip-egg-info-rt1f1z0t/Mikado.egg-info/SOURCES.txt' 2023-09-09T10:59:18,928 reading manifest file '/tmp/pip-pip-egg-info-rt1f1z0t/Mikado.egg-info/SOURCES.txt' 2023-09-09T10:59:18,930 reading manifest template 'MANIFEST.in' 2023-09-09T10:59:19,223 warning: no files found matching '*py' under directory 'bin' 2023-09-09T10:59:19,445 adding license file 'AUTHORS' 2023-09-09T10:59:19,462 writing manifest file '/tmp/pip-pip-egg-info-rt1f1z0t/Mikado.egg-info/SOURCES.txt' 2023-09-09T10:59:19,757 Preparing metadata (setup.py): finished with status 'done' 2023-09-09T10:59:19,761 Source in /tmp/pip-wheel-xa4ubr2k/mikado_4efde69a635e41fd8aee8c56200c3f12 has version 1.0.0b9, which satisfies requirement mikado==1.0.0b9 from https://files.pythonhosted.org/packages/8f/6c/ee9884cd930db5bfbee812ad1592a32127edbedf01cf28713eda06d5a9b1/Mikado-1.0.0b9.tar.gz 2023-09-09T10:59:19,762 Removed mikado==1.0.0b9 from https://files.pythonhosted.org/packages/8f/6c/ee9884cd930db5bfbee812ad1592a32127edbedf01cf28713eda06d5a9b1/Mikado-1.0.0b9.tar.gz from build tracker '/tmp/pip-build-tracker-i22an8ns' 2023-09-09T10:59:19,766 Created temporary directory: /tmp/pip-unpack-kb3klzdf 2023-09-09T10:59:19,767 Created temporary directory: /tmp/pip-unpack-c2qlb5i6 2023-09-09T10:59:19,798 Building wheels for collected packages: mikado 2023-09-09T10:59:19,803 Created temporary directory: /tmp/pip-wheel-9t6jnel6 2023-09-09T10:59:19,803 Building wheel for mikado (setup.py): started 2023-09-09T10:59:19,804 Destination directory: /tmp/pip-wheel-9t6jnel6 2023-09-09T10:59:19,805 Running command python setup.py bdist_wheel 2023-09-09T10:59:21,318 running bdist_wheel 2023-09-09T10:59:21,431 running build 2023-09-09T10:59:21,432 running build_py 2023-09-09T10:59:21,458 creating build/lib.linux-armv7l-cpython-311 2023-09-09T10:59:21,459 creating build/lib.linux-armv7l-cpython-311/Mikado 2023-09-09T10:59:21,460 copying Mikado/__init__.py -> build/lib.linux-armv7l-cpython-311/Mikado 2023-09-09T10:59:21,462 copying Mikado/exceptions.py -> build/lib.linux-armv7l-cpython-311/Mikado 2023-09-09T10:59:21,465 creating build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,466 copying Mikado/tests/test_clique_methods.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,468 copying Mikado/tests/test_modifications.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,470 copying Mikado/tests/test_abstractlocus.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,472 copying Mikado/tests/transcript_tester_single.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,475 copying Mikado/tests/transcript_tester_positive.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,478 copying Mikado/tests/test_transcript_checker.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,480 copying Mikado/tests/test_splitting.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,482 copying Mikado/tests/transcript_tester_negative.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,485 copying Mikado/tests/parser_testing.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,487 copying Mikado/tests/orf_tester.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,490 copying Mikado/tests/utilities_tester.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,491 copying Mikado/tests/locus_tester.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,494 copying Mikado/tests/test_system_calls.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,497 copying Mikado/tests/test_gene.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,499 copying Mikado/tests/test_invalid_orfs.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,501 copying Mikado/tests/test_db_utils.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,503 copying Mikado/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,505 copying Mikado/tests/test_metrics.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,507 copying Mikado/tests/assigner_tester.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,510 copying Mikado/tests/test_transcript_methods.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,512 copying Mikado/tests/intervaltree_tests.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,514 copying Mikado/tests/test_blast_related.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,516 copying Mikado/tests/test_external_scores.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,518 copying Mikado/tests/test_excluded.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,519 copying Mikado/tests/test_serialisation.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,521 copying Mikado/tests/test_json.py -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:21,524 creating build/lib.linux-armv7l-cpython-311/Mikado/loci 2023-09-09T10:59:21,525 copying Mikado/loci/superlocus.py -> build/lib.linux-armv7l-cpython-311/Mikado/loci 2023-09-09T10:59:21,528 copying Mikado/loci/excluded.py -> build/lib.linux-armv7l-cpython-311/Mikado/loci 2023-09-09T10:59:21,529 copying Mikado/loci/monosublocusholder.py -> build/lib.linux-armv7l-cpython-311/Mikado/loci 2023-09-09T10:59:21,532 copying Mikado/loci/monosublocus.py -> build/lib.linux-armv7l-cpython-311/Mikado/loci 2023-09-09T10:59:21,533 copying Mikado/loci/abstractlocus.py -> build/lib.linux-armv7l-cpython-311/Mikado/loci 2023-09-09T10:59:21,536 copying Mikado/loci/transcript.py -> build/lib.linux-armv7l-cpython-311/Mikado/loci 2023-09-09T10:59:21,540 copying Mikado/loci/sublocus.py -> build/lib.linux-armv7l-cpython-311/Mikado/loci 2023-09-09T10:59:21,542 copying Mikado/loci/__init__.py -> build/lib.linux-armv7l-cpython-311/Mikado/loci 2023-09-09T10:59:21,544 copying Mikado/loci/transcriptchecker.py -> build/lib.linux-armv7l-cpython-311/Mikado/loci 2023-09-09T10:59:21,546 copying Mikado/loci/reference_gene.py -> build/lib.linux-armv7l-cpython-311/Mikado/loci 2023-09-09T10:59:21,549 copying Mikado/loci/locus.py -> build/lib.linux-armv7l-cpython-311/Mikado/loci 2023-09-09T10:59:21,551 copying Mikado/loci/clique_methods.py -> build/lib.linux-armv7l-cpython-311/Mikado/loci 2023-09-09T10:59:21,554 creating build/lib.linux-armv7l-cpython-311/Mikado/preparation 2023-09-09T10:59:21,555 copying Mikado/preparation/checking.py -> build/lib.linux-armv7l-cpython-311/Mikado/preparation 2023-09-09T10:59:21,557 copying Mikado/preparation/__init__.py -> build/lib.linux-armv7l-cpython-311/Mikado/preparation 2023-09-09T10:59:21,559 copying Mikado/preparation/prepare.py -> build/lib.linux-armv7l-cpython-311/Mikado/preparation 2023-09-09T10:59:21,561 copying Mikado/preparation/annotation_parser.py -> build/lib.linux-armv7l-cpython-311/Mikado/preparation 2023-09-09T10:59:21,564 creating build/lib.linux-armv7l-cpython-311/Mikado/parsers 2023-09-09T10:59:21,565 copying Mikado/parsers/blast_xml.py -> build/lib.linux-armv7l-cpython-311/Mikado/parsers 2023-09-09T10:59:21,568 copying Mikado/parsers/GTF.py -> build/lib.linux-armv7l-cpython-311/Mikado/parsers 2023-09-09T10:59:21,571 copying Mikado/parsers/blast_utils.py -> build/lib.linux-armv7l-cpython-311/Mikado/parsers 2023-09-09T10:59:21,573 copying Mikado/parsers/bed12.py -> build/lib.linux-armv7l-cpython-311/Mikado/parsers 2023-09-09T10:59:21,576 copying Mikado/parsers/GFF.py -> build/lib.linux-armv7l-cpython-311/Mikado/parsers 2023-09-09T10:59:21,578 copying Mikado/parsers/__init__.py -> build/lib.linux-armv7l-cpython-311/Mikado/parsers 2023-09-09T10:59:21,580 copying Mikado/parsers/gfannotation.py -> build/lib.linux-armv7l-cpython-311/Mikado/parsers 2023-09-09T10:59:21,583 creating build/lib.linux-armv7l-cpython-311/Mikado/subprograms 2023-09-09T10:59:21,584 copying Mikado/subprograms/serialise.py -> build/lib.linux-armv7l-cpython-311/Mikado/subprograms 2023-09-09T10:59:21,586 copying Mikado/subprograms/pick.py -> build/lib.linux-armv7l-cpython-311/Mikado/subprograms 2023-09-09T10:59:21,588 copying Mikado/subprograms/compare.py -> build/lib.linux-armv7l-cpython-311/Mikado/subprograms 2023-09-09T10:59:21,591 copying Mikado/subprograms/__main__.py -> build/lib.linux-armv7l-cpython-311/Mikado/subprograms 2023-09-09T10:59:21,593 copying Mikado/subprograms/__init__.py -> build/lib.linux-armv7l-cpython-311/Mikado/subprograms 2023-09-09T10:59:21,594 copying Mikado/subprograms/prepare.py -> build/lib.linux-armv7l-cpython-311/Mikado/subprograms 2023-09-09T10:59:21,596 copying Mikado/subprograms/configure.py -> build/lib.linux-armv7l-cpython-311/Mikado/subprograms 2023-09-09T10:59:21,599 creating build/lib.linux-armv7l-cpython-311/Mikado/scales 2023-09-09T10:59:21,600 copying Mikado/scales/assigner.py -> build/lib.linux-armv7l-cpython-311/Mikado/scales 2023-09-09T10:59:21,603 copying Mikado/scales/compare.py -> build/lib.linux-armv7l-cpython-311/Mikado/scales 2023-09-09T10:59:21,605 copying Mikado/scales/resultstorer.py -> build/lib.linux-armv7l-cpython-311/Mikado/scales 2023-09-09T10:59:21,607 copying Mikado/scales/__init__.py -> build/lib.linux-armv7l-cpython-311/Mikado/scales 2023-09-09T10:59:21,609 copying Mikado/scales/accountant.py -> build/lib.linux-armv7l-cpython-311/Mikado/scales 2023-09-09T10:59:21,612 creating build/lib.linux-armv7l-cpython-311/Mikado/picking 2023-09-09T10:59:21,613 copying Mikado/picking/picker.py -> build/lib.linux-armv7l-cpython-311/Mikado/picking 2023-09-09T10:59:21,617 copying Mikado/picking/loci_processer.py -> build/lib.linux-armv7l-cpython-311/Mikado/picking 2023-09-09T10:59:21,619 copying Mikado/picking/__init__.py -> build/lib.linux-armv7l-cpython-311/Mikado/picking 2023-09-09T10:59:21,622 creating build/lib.linux-armv7l-cpython-311/Mikado/configuration 2023-09-09T10:59:21,622 copying Mikado/configuration/__init__.py -> build/lib.linux-armv7l-cpython-311/Mikado/configuration 2023-09-09T10:59:21,624 copying Mikado/configuration/daijin_configurator.py -> build/lib.linux-armv7l-cpython-311/Mikado/configuration 2023-09-09T10:59:21,626 copying Mikado/configuration/configurator.py -> build/lib.linux-armv7l-cpython-311/Mikado/configuration 2023-09-09T10:59:21,629 creating build/lib.linux-armv7l-cpython-311/Mikado/daijin 2023-09-09T10:59:21,630 copying Mikado/daijin/__init__.py -> build/lib.linux-armv7l-cpython-311/Mikado/daijin 2023-09-09T10:59:21,633 creating build/lib.linux-armv7l-cpython-311/Mikado/serializers 2023-09-09T10:59:21,634 copying Mikado/serializers/external.py -> build/lib.linux-armv7l-cpython-311/Mikado/serializers 2023-09-09T10:59:21,636 copying Mikado/serializers/orf.py -> build/lib.linux-armv7l-cpython-311/Mikado/serializers 2023-09-09T10:59:21,638 copying Mikado/serializers/junction.py -> build/lib.linux-armv7l-cpython-311/Mikado/serializers 2023-09-09T10:59:21,640 copying Mikado/serializers/__init__.py -> build/lib.linux-armv7l-cpython-311/Mikado/serializers 2023-09-09T10:59:21,643 creating build/lib.linux-armv7l-cpython-311/Mikado/utilities 2023-09-09T10:59:21,644 copying Mikado/utilities/__init__.py -> build/lib.linux-armv7l-cpython-311/Mikado/utilities 2023-09-09T10:59:21,646 copying Mikado/utilities/dbutils.py -> build/lib.linux-armv7l-cpython-311/Mikado/utilities 2023-09-09T10:59:21,648 copying Mikado/utilities/log_utils.py -> build/lib.linux-armv7l-cpython-311/Mikado/utilities 2023-09-09T10:59:21,650 creating build/lib.linux-armv7l-cpython-311/Mikado/loci/transcript_methods 2023-09-09T10:59:21,651 copying Mikado/loci/transcript_methods/printing.py -> build/lib.linux-armv7l-cpython-311/Mikado/loci/transcript_methods 2023-09-09T10:59:21,654 copying Mikado/loci/transcript_methods/finalizing.py -> build/lib.linux-armv7l-cpython-311/Mikado/loci/transcript_methods 2023-09-09T10:59:21,656 copying Mikado/loci/transcript_methods/__init__.py -> build/lib.linux-armv7l-cpython-311/Mikado/loci/transcript_methods 2023-09-09T10:59:21,658 copying Mikado/loci/transcript_methods/retrieval.py -> build/lib.linux-armv7l-cpython-311/Mikado/loci/transcript_methods 2023-09-09T10:59:21,661 copying Mikado/loci/transcript_methods/splitting.py -> build/lib.linux-armv7l-cpython-311/Mikado/loci/transcript_methods 2023-09-09T10:59:21,664 creating build/lib.linux-armv7l-cpython-311/Mikado/subprograms/util 2023-09-09T10:59:21,665 copying Mikado/subprograms/util/merge_blast.py -> build/lib.linux-armv7l-cpython-311/Mikado/subprograms/util 2023-09-09T10:59:21,666 copying Mikado/subprograms/util/grep.py -> build/lib.linux-armv7l-cpython-311/Mikado/subprograms/util 2023-09-09T10:59:21,668 copying Mikado/subprograms/util/awk_gtf.py -> build/lib.linux-armv7l-cpython-311/Mikado/subprograms/util 2023-09-09T10:59:21,670 copying Mikado/subprograms/util/trim.py -> build/lib.linux-armv7l-cpython-311/Mikado/subprograms/util 2023-09-09T10:59:21,672 copying Mikado/subprograms/util/metrics.py -> build/lib.linux-armv7l-cpython-311/Mikado/subprograms/util 2023-09-09T10:59:21,674 copying Mikado/subprograms/util/convert.py -> build/lib.linux-armv7l-cpython-311/Mikado/subprograms/util 2023-09-09T10:59:21,675 copying Mikado/subprograms/util/__init__.py -> build/lib.linux-armv7l-cpython-311/Mikado/subprograms/util 2023-09-09T10:59:21,677 copying Mikado/subprograms/util/stats.py -> build/lib.linux-armv7l-cpython-311/Mikado/subprograms/util 2023-09-09T10:59:21,680 creating build/lib.linux-armv7l-cpython-311/Mikado/serializers/blast_serializer 2023-09-09T10:59:21,681 copying Mikado/serializers/blast_serializer/hit.py -> build/lib.linux-armv7l-cpython-311/Mikado/serializers/blast_serializer 2023-09-09T10:59:21,683 copying Mikado/serializers/blast_serializer/target.py -> build/lib.linux-armv7l-cpython-311/Mikado/serializers/blast_serializer 2023-09-09T10:59:21,685 copying Mikado/serializers/blast_serializer/utils.py -> build/lib.linux-armv7l-cpython-311/Mikado/serializers/blast_serializer 2023-09-09T10:59:21,687 copying Mikado/serializers/blast_serializer/hsp.py -> build/lib.linux-armv7l-cpython-311/Mikado/serializers/blast_serializer 2023-09-09T10:59:21,689 copying Mikado/serializers/blast_serializer/query.py -> build/lib.linux-armv7l-cpython-311/Mikado/serializers/blast_serializer 2023-09-09T10:59:21,690 copying Mikado/serializers/blast_serializer/__init__.py -> build/lib.linux-armv7l-cpython-311/Mikado/serializers/blast_serializer 2023-09-09T10:59:21,692 copying Mikado/serializers/blast_serializer/xml_serialiser.py -> build/lib.linux-armv7l-cpython-311/Mikado/serializers/blast_serializer 2023-09-09T10:59:21,695 running egg_info 2023-09-09T10:59:21,749 writing Mikado.egg-info/PKG-INFO 2023-09-09T10:59:21,753 writing dependency_links to Mikado.egg-info/dependency_links.txt 2023-09-09T10:59:21,755 writing entry points to Mikado.egg-info/entry_points.txt 2023-09-09T10:59:21,757 writing requirements to Mikado.egg-info/requires.txt 2023-09-09T10:59:21,758 writing top-level names to Mikado.egg-info/top_level.txt 2023-09-09T10:59:21,794 reading manifest file 'Mikado.egg-info/SOURCES.txt' 2023-09-09T10:59:21,806 reading manifest template 'MANIFEST.in' 2023-09-09T10:59:22,152 warning: no files found matching '*py' under directory 'bin' 2023-09-09T10:59:22,472 adding license file 'AUTHORS' 2023-09-09T10:59:22,497 writing manifest file 'Mikado.egg-info/SOURCES.txt' 2023-09-09T10:59:22,514 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'Mikado.configuration.scoring_files' is absent from the `packages` configuration. 2023-09-09T10:59:22,515 !! 2023-09-09T10:59:22,516 ******************************************************************************** 2023-09-09T10:59:22,516 ############################ 2023-09-09T10:59:22,517 # Package would be ignored # 2023-09-09T10:59:22,517 ############################ 2023-09-09T10:59:22,518 Python recognizes 'Mikado.configuration.scoring_files' as an importable package[^1], 2023-09-09T10:59:22,519 but it is absent from setuptools' `packages` configuration. 2023-09-09T10:59:22,520 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-09T10:59:22,521 package, please make sure that 'Mikado.configuration.scoring_files' is explicitly added 2023-09-09T10:59:22,521 to the `packages` configuration field. 2023-09-09T10:59:22,522 Alternatively, you can also rely on setuptools' discovery methods 2023-09-09T10:59:22,523 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-09T10:59:22,523 instead of `find_packages(...)`/`find:`). 2023-09-09T10:59:22,524 You can read more about "package discovery" on setuptools documentation page: 2023-09-09T10:59:22,525 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-09T10:59:22,525 If you don't want 'Mikado.configuration.scoring_files' to be distributed and are 2023-09-09T10:59:22,526 already explicitly excluding 'Mikado.configuration.scoring_files' via 2023-09-09T10:59:22,526 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-09T10:59:22,527 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-09T10:59:22,527 combination with a more fine grained `package-data` configuration. 2023-09-09T10:59:22,528 You can read more about "package data files" on setuptools documentation page: 2023-09-09T10:59:22,529 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-09T10:59:22,531 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-09T10:59:22,531 even if it does not contain any `.py` files. 2023-09-09T10:59:22,531 On the other hand, currently there is no concept of package data 2023-09-09T10:59:22,532 directory, all directories are treated like packages. 2023-09-09T10:59:22,533 ******************************************************************************** 2023-09-09T10:59:22,534 !! 2023-09-09T10:59:22,534 check.warn(importable) 2023-09-09T10:59:22,535 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'Mikado.tests.__pycache__' is absent from the `packages` configuration. 2023-09-09T10:59:22,536 !! 2023-09-09T10:59:22,537 ******************************************************************************** 2023-09-09T10:59:22,538 ############################ 2023-09-09T10:59:22,539 # Package would be ignored # 2023-09-09T10:59:22,539 ############################ 2023-09-09T10:59:22,540 Python recognizes 'Mikado.tests.__pycache__' as an importable package[^1], 2023-09-09T10:59:22,541 but it is absent from setuptools' `packages` configuration. 2023-09-09T10:59:22,542 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-09T10:59:22,543 package, please make sure that 'Mikado.tests.__pycache__' is explicitly added 2023-09-09T10:59:22,543 to the `packages` configuration field. 2023-09-09T10:59:22,545 Alternatively, you can also rely on setuptools' discovery methods 2023-09-09T10:59:22,545 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-09T10:59:22,546 instead of `find_packages(...)`/`find:`). 2023-09-09T10:59:22,547 You can read more about "package discovery" on setuptools documentation page: 2023-09-09T10:59:22,548 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-09T10:59:22,549 If you don't want 'Mikado.tests.__pycache__' to be distributed and are 2023-09-09T10:59:22,550 already explicitly excluding 'Mikado.tests.__pycache__' via 2023-09-09T10:59:22,551 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-09T10:59:22,551 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-09T10:59:22,552 combination with a more fine grained `package-data` configuration. 2023-09-09T10:59:22,554 You can read more about "package data files" on setuptools documentation page: 2023-09-09T10:59:22,555 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-09T10:59:22,556 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-09T10:59:22,556 even if it does not contain any `.py` files. 2023-09-09T10:59:22,557 On the other hand, currently there is no concept of package data 2023-09-09T10:59:22,557 directory, all directories are treated like packages. 2023-09-09T10:59:22,558 ******************************************************************************** 2023-09-09T10:59:22,559 !! 2023-09-09T10:59:22,559 check.warn(importable) 2023-09-09T10:59:22,560 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'Mikado.tests.fusion_test' is absent from the `packages` configuration. 2023-09-09T10:59:22,560 !! 2023-09-09T10:59:22,602 ******************************************************************************** 2023-09-09T10:59:22,630 ############################ 2023-09-09T10:59:22,662 # Package would be ignored # 2023-09-09T10:59:22,685 ############################ 2023-09-09T10:59:22,698 Python recognizes 'Mikado.tests.fusion_test' as an importable package[^1], 2023-09-09T10:59:22,702 but it is absent from setuptools' `packages` configuration. 2023-09-09T10:59:22,706 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-09T10:59:22,707 package, please make sure that 'Mikado.tests.fusion_test' is explicitly added 2023-09-09T10:59:22,707 to the `packages` configuration field. 2023-09-09T10:59:22,708 Alternatively, you can also rely on setuptools' discovery methods 2023-09-09T10:59:22,709 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-09T10:59:22,710 instead of `find_packages(...)`/`find:`). 2023-09-09T10:59:22,711 You can read more about "package discovery" on setuptools documentation page: 2023-09-09T10:59:22,712 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-09T10:59:22,713 If you don't want 'Mikado.tests.fusion_test' to be distributed and are 2023-09-09T10:59:22,714 already explicitly excluding 'Mikado.tests.fusion_test' via 2023-09-09T10:59:22,715 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-09T10:59:22,715 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-09T10:59:22,716 combination with a more fine grained `package-data` configuration. 2023-09-09T10:59:22,717 You can read more about "package data files" on setuptools documentation page: 2023-09-09T10:59:22,718 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-09T10:59:22,720 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-09T10:59:22,723 even if it does not contain any `.py` files. 2023-09-09T10:59:22,723 On the other hand, currently there is no concept of package data 2023-09-09T10:59:22,724 directory, all directories are treated like packages. 2023-09-09T10:59:22,724 ******************************************************************************** 2023-09-09T10:59:22,725 !! 2023-09-09T10:59:22,726 check.warn(importable) 2023-09-09T10:59:22,727 copying Mikado/tests/chr5.fas.gz -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:22,727 copying Mikado/tests/configuration.yaml -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:22,728 copying Mikado/tests/cufflinks.gtf -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:22,729 copying Mikado/tests/genome.fai -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:22,729 copying Mikado/tests/junctions.bed -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:22,731 copying Mikado/tests/mikado.blast.asn.gz -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:22,732 copying Mikado/tests/mikado.blast.xml -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:22,745 copying Mikado/tests/mikado.db -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:22,771 copying Mikado/tests/mikado_prepared.gtf -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:22,775 copying Mikado/tests/plants.suspicious_requirement.yaml -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:22,777 copying Mikado/tests/plants.yaml~ -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:22,779 copying Mikado/tests/trinity.cDNA_match.gff3 -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:22,782 copying Mikado/tests/trinity.gff3 -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:22,785 copying Mikado/tests/trinity.gtf -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:22,788 copying Mikado/tests/trinity.match_matchpart.gff3 -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:22,791 copying Mikado/tests/trinity_stats.txt -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:22,793 copying Mikado/tests/uniprot_sprot_plants.fasta.gz -> build/lib.linux-armv7l-cpython-311/Mikado/tests 2023-09-09T10:59:22,929 creating build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,931 copying Mikado/tests/__pycache__/__init__.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,933 copying Mikado/tests/__pycache__/__init__.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,935 copying Mikado/tests/__pycache__/assigner_tester.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,938 copying Mikado/tests/__pycache__/assigner_tester.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,942 copying Mikado/tests/__pycache__/intervaltree_tests.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,945 copying Mikado/tests/__pycache__/intervaltree_tests.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,947 copying Mikado/tests/__pycache__/locus_tester.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,951 copying Mikado/tests/__pycache__/locus_tester.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,955 copying Mikado/tests/__pycache__/orf_tester.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,958 copying Mikado/tests/__pycache__/orf_tester.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,961 copying Mikado/tests/__pycache__/parser_testing.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,964 copying Mikado/tests/__pycache__/parser_testing.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,966 copying Mikado/tests/__pycache__/phases_checker.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,969 copying Mikado/tests/__pycache__/phases_checker.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,972 copying Mikado/tests/__pycache__/system_checks.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,975 copying Mikado/tests/__pycache__/test_abstractlocus.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,977 copying Mikado/tests/__pycache__/test_abstractlocus.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,980 copying Mikado/tests/__pycache__/test_blast_related.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,982 copying Mikado/tests/__pycache__/test_blast_related.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,985 copying Mikado/tests/__pycache__/test_clique_methods.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,987 copying Mikado/tests/__pycache__/test_clique_methods.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,989 copying Mikado/tests/__pycache__/test_db_utils.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,992 copying Mikado/tests/__pycache__/test_db_utils.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,995 copying Mikado/tests/__pycache__/test_excluded.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,997 copying Mikado/tests/__pycache__/test_excluded.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:22,999 copying Mikado/tests/__pycache__/test_external_scores.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,002 copying Mikado/tests/__pycache__/test_gene.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,004 copying Mikado/tests/__pycache__/test_gene.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,006 copying Mikado/tests/__pycache__/test_invalid_orfs.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,009 copying Mikado/tests/__pycache__/test_invalid_orfs.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,012 copying Mikado/tests/__pycache__/test_json.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,014 copying Mikado/tests/__pycache__/test_metrics.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,017 copying Mikado/tests/__pycache__/test_metrics.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,020 copying Mikado/tests/__pycache__/test_modifications.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,023 copying Mikado/tests/__pycache__/test_modifications.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,026 copying Mikado/tests/__pycache__/test_serialisation.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,031 copying Mikado/tests/__pycache__/test_serialisation.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,037 copying Mikado/tests/__pycache__/test_splitting.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,043 copying Mikado/tests/__pycache__/test_splitting.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,049 copying Mikado/tests/__pycache__/test_system_calls.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,054 copying Mikado/tests/__pycache__/test_transcript_checker.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,057 copying Mikado/tests/__pycache__/test_transcript_checker.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,060 copying Mikado/tests/__pycache__/test_transcript_methods.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,064 copying Mikado/tests/__pycache__/test_transcript_methods.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,068 copying Mikado/tests/__pycache__/transcript_tester_negative.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,074 copying Mikado/tests/__pycache__/transcript_tester_negative.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,082 copying Mikado/tests/__pycache__/transcript_tester_positive.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,091 copying Mikado/tests/__pycache__/transcript_tester_positive.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,094 copying Mikado/tests/__pycache__/transcript_tester_single.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,096 copying Mikado/tests/__pycache__/transcript_tester_single.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,099 copying Mikado/tests/__pycache__/utilities_tester.cpython-34.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,102 copying Mikado/tests/__pycache__/utilities_tester.cpython-35.pyc -> build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__ 2023-09-09T10:59:23,104 creating build/lib.linux-armv7l-cpython-311/Mikado/tests/fusion_test 2023-09-09T10:59:23,105 copying Mikado/tests/fusion_test/fusion_test.log -> build/lib.linux-armv7l-cpython-311/Mikado/tests/fusion_test 2023-09-09T10:59:23,107 copying Mikado/tests/fusion_test/fusion_test_pred.gtf -> build/lib.linux-armv7l-cpython-311/Mikado/tests/fusion_test 2023-09-09T10:59:23,109 copying Mikado/tests/fusion_test/fusion_test_ref.gff3 -> build/lib.linux-armv7l-cpython-311/Mikado/tests/fusion_test 2023-09-09T10:59:23,111 copying Mikado/scales/contrast.c -> build/lib.linux-armv7l-cpython-311/Mikado/scales 2023-09-09T10:59:23,121 copying Mikado/scales/contrast.pxd -> build/lib.linux-armv7l-cpython-311/Mikado/scales 2023-09-09T10:59:23,123 copying Mikado/scales/contrast.pyx -> build/lib.linux-armv7l-cpython-311/Mikado/scales 2023-09-09T10:59:23,125 copying Mikado/scales/f1.c -> build/lib.linux-armv7l-cpython-311/Mikado/scales 2023-09-09T10:59:23,131 copying Mikado/scales/f1.pxd -> build/lib.linux-armv7l-cpython-311/Mikado/scales 2023-09-09T10:59:23,133 copying Mikado/scales/f1.pyx -> build/lib.linux-armv7l-cpython-311/Mikado/scales 2023-09-09T10:59:23,135 copying Mikado/configuration/configuration_blueprint.json -> build/lib.linux-armv7l-cpython-311/Mikado/configuration 2023-09-09T10:59:23,138 copying Mikado/configuration/daijin_schema.json -> build/lib.linux-armv7l-cpython-311/Mikado/configuration 2023-09-09T10:59:23,141 copying Mikado/configuration/requirements_blueprint.json -> build/lib.linux-armv7l-cpython-311/Mikado/configuration 2023-09-09T10:59:23,143 copying Mikado/configuration/scoring_blueprint.json -> build/lib.linux-armv7l-cpython-311/Mikado/configuration 2023-09-09T10:59:23,144 creating build/lib.linux-armv7l-cpython-311/Mikado/configuration/scoring_files 2023-09-09T10:59:23,145 copying Mikado/configuration/scoring_files/human.yaml -> build/lib.linux-armv7l-cpython-311/Mikado/configuration/scoring_files 2023-09-09T10:59:23,148 copying Mikado/configuration/scoring_files/insects.yaml -> build/lib.linux-armv7l-cpython-311/Mikado/configuration/scoring_files 2023-09-09T10:59:23,150 copying Mikado/configuration/scoring_files/plants.yaml -> build/lib.linux-armv7l-cpython-311/Mikado/configuration/scoring_files 2023-09-09T10:59:23,153 copying Mikado/configuration/scoring_files/spombe.yaml -> build/lib.linux-armv7l-cpython-311/Mikado/configuration/scoring_files 2023-09-09T10:59:23,155 copying Mikado/configuration/scoring_files/worm.yaml -> build/lib.linux-armv7l-cpython-311/Mikado/configuration/scoring_files 2023-09-09T10:59:23,157 copying Mikado/daijin/example_config.yaml -> build/lib.linux-armv7l-cpython-311/Mikado/daijin 2023-09-09T10:59:23,159 copying Mikado/daijin/hpc.json -> build/lib.linux-armv7l-cpython-311/Mikado/daijin 2023-09-09T10:59:23,161 copying Mikado/daijin/hpc.yaml -> build/lib.linux-armv7l-cpython-311/Mikado/daijin 2023-09-09T10:59:23,163 copying Mikado/daijin/local.yaml -> build/lib.linux-armv7l-cpython-311/Mikado/daijin 2023-09-09T10:59:23,165 copying Mikado/daijin/mikado.snakefile -> build/lib.linux-armv7l-cpython-311/Mikado/daijin 2023-09-09T10:59:23,168 copying Mikado/daijin/tr.snakefile -> build/lib.linux-armv7l-cpython-311/Mikado/daijin 2023-09-09T10:59:23,170 copying Mikado/utilities/intervaltree.c -> build/lib.linux-armv7l-cpython-311/Mikado/utilities 2023-09-09T10:59:23,185 copying Mikado/utilities/intervaltree.pyx -> build/lib.linux-armv7l-cpython-311/Mikado/utilities 2023-09-09T10:59:23,187 copying Mikado/utilities/overlap.c -> build/lib.linux-armv7l-cpython-311/Mikado/utilities 2023-09-09T10:59:23,194 copying Mikado/utilities/overlap.pxd -> build/lib.linux-armv7l-cpython-311/Mikado/utilities 2023-09-09T10:59:23,196 copying Mikado/utilities/overlap.pyx -> build/lib.linux-armv7l-cpython-311/Mikado/utilities 2023-09-09T10:59:23,205 running build_ext 2023-09-09T10:59:23,212 building 'Mikado.utilities.overlap' extension 2023-09-09T10:59:23,212 creating build/temp.linux-armv7l-cpython-311 2023-09-09T10:59:23,213 creating build/temp.linux-armv7l-cpython-311/Mikado 2023-09-09T10:59:23,214 creating build/temp.linux-armv7l-cpython-311/Mikado/utilities 2023-09-09T10:59:23,215 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c Mikado/utilities/overlap.c -o build/temp.linux-armv7l-cpython-311/Mikado/utilities/overlap.o 2023-09-09T10:59:26,973 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/Mikado/utilities/overlap.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/Mikado/utilities/overlap.cpython-311-arm-linux-gnueabihf.so 2023-09-09T10:59:27,077 building 'Mikado.scales.f1' extension 2023-09-09T10:59:27,077 creating build/temp.linux-armv7l-cpython-311/Mikado/scales 2023-09-09T10:59:27,078 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c Mikado/scales/f1.c -o build/temp.linux-armv7l-cpython-311/Mikado/scales/f1.o 2023-09-09T10:59:30,399 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/Mikado/scales/f1.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/Mikado/scales/f1.cpython-311-arm-linux-gnueabihf.so 2023-09-09T10:59:30,501 building 'Mikado.scales.contrast' extension 2023-09-09T10:59:30,502 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c Mikado/scales/contrast.c -o build/temp.linux-armv7l-cpython-311/Mikado/scales/contrast.o 2023-09-09T10:59:43,088 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/Mikado/scales/contrast.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/Mikado/scales/contrast.cpython-311-arm-linux-gnueabihf.so 2023-09-09T10:59:43,207 building 'Mikado.utilities.intervaltree' extension 2023-09-09T10:59:43,208 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c Mikado/utilities/intervaltree.c -o build/temp.linux-armv7l-cpython-311/Mikado/utilities/intervaltree.o 2023-09-09T11:00:02,210 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/Mikado/utilities/intervaltree.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/Mikado/utilities/intervaltree.cpython-311-arm-linux-gnueabihf.so 2023-09-09T11:00:02,331 running build_scripts 2023-09-09T11:00:02,332 creating build/scripts-3.11 2023-09-09T11:00:02,333 copying and adjusting util/asm_collect.py -> build/scripts-3.11 2023-09-09T11:00:02,335 copying and adjusting util/remove_from_embl.py -> build/scripts-3.11 2023-09-09T11:00:02,336 copying and adjusting util/create_model.py -> build/scripts-3.11 2023-09-09T11:00:02,339 copying and adjusting util/grep.py -> build/scripts-3.11 2023-09-09T11:00:02,340 copying and adjusting util/class_run.py -> build/scripts-3.11 2023-09-09T11:00:02,342 copying and adjusting util/split_fasta.py -> build/scripts-3.11 2023-09-09T11:00:02,345 copying and adjusting util/self_training.py -> build/scripts-3.11 2023-09-09T11:00:02,347 copying and adjusting util/trim_long_introns.py -> build/scripts-3.11 2023-09-09T11:00:02,349 copying and adjusting util/analyse_metrics.py -> build/scripts-3.11 2023-09-09T11:00:02,350 copying and adjusting util/bam2gtf.py -> build/scripts-3.11 2023-09-09T11:00:02,352 copying and adjusting util/sanitize_blast_db.py -> build/scripts-3.11 2023-09-09T11:00:02,353 copying and adjusting util/add_transcript_feature_to_gtf.py -> build/scripts-3.11 2023-09-09T11:00:02,355 copying and adjusting util/getFastaFromIds.py -> build/scripts-3.11 2023-09-09T11:00:02,357 copying and adjusting util/align_collect.py -> build/scripts-3.11 2023-09-09T11:00:02,358 copying and adjusting util/merge_junction_bed12.py -> build/scripts-3.11 2023-09-09T11:00:02,360 copying and adjusting util/gffjunc_to_bed12.py -> build/scripts-3.11 2023-09-09T11:00:02,361 changing mode of build/scripts-3.11/asm_collect.py from 644 to 755 2023-09-09T11:00:02,362 changing mode of build/scripts-3.11/remove_from_embl.py from 644 to 755 2023-09-09T11:00:02,362 changing mode of build/scripts-3.11/create_model.py from 644 to 755 2023-09-09T11:00:02,363 changing mode of build/scripts-3.11/grep.py from 644 to 755 2023-09-09T11:00:02,363 changing mode of build/scripts-3.11/class_run.py from 644 to 755 2023-09-09T11:00:02,364 changing mode of build/scripts-3.11/split_fasta.py from 644 to 755 2023-09-09T11:00:02,365 changing mode of build/scripts-3.11/self_training.py from 644 to 755 2023-09-09T11:00:02,365 changing mode of build/scripts-3.11/trim_long_introns.py from 644 to 755 2023-09-09T11:00:02,365 changing mode of build/scripts-3.11/analyse_metrics.py from 644 to 755 2023-09-09T11:00:02,366 changing mode of build/scripts-3.11/bam2gtf.py from 644 to 755 2023-09-09T11:00:02,367 changing mode of build/scripts-3.11/sanitize_blast_db.py from 644 to 755 2023-09-09T11:00:02,367 changing mode of build/scripts-3.11/add_transcript_feature_to_gtf.py from 644 to 755 2023-09-09T11:00:02,368 changing mode of build/scripts-3.11/getFastaFromIds.py from 644 to 755 2023-09-09T11:00:02,368 changing mode of build/scripts-3.11/align_collect.py from 644 to 755 2023-09-09T11:00:02,369 changing mode of build/scripts-3.11/merge_junction_bed12.py from 644 to 755 2023-09-09T11:00:02,369 changing mode of build/scripts-3.11/gffjunc_to_bed12.py from 644 to 755 2023-09-09T11:00:02,393 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-09-09T11:00:02,394 !! 2023-09-09T11:00:02,395 ******************************************************************************** 2023-09-09T11:00:02,396 Please avoid running ``setup.py`` directly. 2023-09-09T11:00:02,396 Instead, use pypa/build, pypa/installer or other 2023-09-09T11:00:02,397 standards-based tools. 2023-09-09T11:00:02,398 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-09-09T11:00:02,399 ******************************************************************************** 2023-09-09T11:00:02,400 !! 2023-09-09T11:00:02,401 self.initialize_options() 2023-09-09T11:00:02,420 installing to build/bdist.linux-armv7l/wheel 2023-09-09T11:00:02,421 running install 2023-09-09T11:00:02,445 running install_lib 2023-09-09T11:00:02,468 creating build/bdist.linux-armv7l 2023-09-09T11:00:02,469 creating build/bdist.linux-armv7l/wheel 2023-09-09T11:00:02,470 creating build/bdist.linux-armv7l/wheel/Mikado 2023-09-09T11:00:02,472 creating build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,473 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/test_clique_methods.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,475 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/uniprot_sprot_plants.fasta.gz -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,582 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/test_modifications.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,584 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/mikado.blast.xml -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,603 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/trinity_stats.txt -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,605 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/trinity.gtf -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,607 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/test_abstractlocus.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,610 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/transcript_tester_single.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,613 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/junctions.bed -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,617 creating build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,618 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/assigner_tester.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,621 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/phases_checker.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,624 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/intervaltree_tests.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,627 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_transcript_methods.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,630 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_modifications.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,632 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/__init__.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,634 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_invalid_orfs.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,636 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_transcript_methods.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,639 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/locus_tester.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,643 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_serialisation.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,645 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_db_utils.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,648 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/transcript_tester_negative.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,651 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_clique_methods.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,654 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_metrics.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,656 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_blast_related.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,658 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/utilities_tester.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,661 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/locus_tester.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,664 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_excluded.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,666 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/intervaltree_tests.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,669 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_blast_related.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,671 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/utilities_tester.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,673 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_external_scores.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,675 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/parser_testing.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,677 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_gene.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,679 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_splitting.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,682 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_abstractlocus.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,684 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_transcript_checker.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,686 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/orf_tester.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,689 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/phases_checker.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,692 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_abstractlocus.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,694 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_serialisation.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,696 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_json.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,698 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/transcript_tester_positive.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,702 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/assigner_tester.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,705 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/transcript_tester_single.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,708 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/transcript_tester_negative.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,711 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_modifications.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,713 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/transcript_tester_positive.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,717 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_splitting.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,719 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/parser_testing.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,721 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_excluded.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,724 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_metrics.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,726 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/system_checks.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,729 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_gene.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,731 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_db_utils.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,733 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/orf_tester.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,736 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_clique_methods.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,738 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/__init__.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,740 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_system_calls.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,743 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_transcript_checker.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,745 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/transcript_tester_single.cpython-34.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,748 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__pycache__/test_invalid_orfs.cpython-35.pyc -> build/bdist.linux-armv7l/wheel/Mikado/tests/__pycache__ 2023-09-09T11:00:02,751 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/transcript_tester_positive.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,754 creating build/bdist.linux-armv7l/wheel/Mikado/tests/fusion_test 2023-09-09T11:00:02,755 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/fusion_test/fusion_test_pred.gtf -> build/bdist.linux-armv7l/wheel/Mikado/tests/fusion_test 2023-09-09T11:00:02,758 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/fusion_test/fusion_test_ref.gff3 -> build/bdist.linux-armv7l/wheel/Mikado/tests/fusion_test 2023-09-09T11:00:02,760 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/fusion_test/fusion_test.log -> build/bdist.linux-armv7l/wheel/Mikado/tests/fusion_test 2023-09-09T11:00:02,762 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/test_transcript_checker.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,765 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/test_splitting.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,767 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/transcript_tester_negative.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,770 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/parser_testing.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,771 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/trinity.cDNA_match.gff3 -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,774 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/mikado.blast.asn.gz -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,779 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/orf_tester.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,782 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/plants.suspicious_requirement.yaml -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,784 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/utilities_tester.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,786 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/locus_tester.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,790 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/test_system_calls.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,793 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/test_gene.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,795 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/test_invalid_orfs.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,797 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/test_db_utils.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,799 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/chr5.fas.gz -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,932 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/__init__.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,934 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/cufflinks.gtf -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,937 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/test_metrics.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,939 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/configuration.yaml -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,941 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/assigner_tester.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,944 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/test_transcript_methods.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,947 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/genome.fai -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,949 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/intervaltree_tests.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,951 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/mikado.db -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,986 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/trinity.match_matchpart.gff3 -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,989 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/trinity.gff3 -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,992 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/test_blast_related.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,994 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/test_external_scores.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,996 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/mikado_prepared.gtf -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:02,999 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/test_excluded.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:03,001 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/test_serialisation.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:03,003 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/plants.yaml~ -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:03,005 copying build/lib.linux-armv7l-cpython-311/Mikado/tests/test_json.py -> build/bdist.linux-armv7l/wheel/Mikado/tests 2023-09-09T11:00:03,007 creating build/bdist.linux-armv7l/wheel/Mikado/loci 2023-09-09T11:00:03,008 copying build/lib.linux-armv7l-cpython-311/Mikado/loci/superlocus.py -> build/bdist.linux-armv7l/wheel/Mikado/loci 2023-09-09T11:00:03,012 copying build/lib.linux-armv7l-cpython-311/Mikado/loci/excluded.py -> build/bdist.linux-armv7l/wheel/Mikado/loci 2023-09-09T11:00:03,013 copying build/lib.linux-armv7l-cpython-311/Mikado/loci/monosublocusholder.py -> build/bdist.linux-armv7l/wheel/Mikado/loci 2023-09-09T11:00:03,016 copying build/lib.linux-armv7l-cpython-311/Mikado/loci/monosublocus.py -> build/bdist.linux-armv7l/wheel/Mikado/loci 2023-09-09T11:00:03,018 copying build/lib.linux-armv7l-cpython-311/Mikado/loci/abstractlocus.py -> build/bdist.linux-armv7l/wheel/Mikado/loci 2023-09-09T11:00:03,022 creating build/bdist.linux-armv7l/wheel/Mikado/loci/transcript_methods 2023-09-09T11:00:03,023 copying build/lib.linux-armv7l-cpython-311/Mikado/loci/transcript_methods/printing.py -> build/bdist.linux-armv7l/wheel/Mikado/loci/transcript_methods 2023-09-09T11:00:03,025 copying build/lib.linux-armv7l-cpython-311/Mikado/loci/transcript_methods/finalizing.py -> build/bdist.linux-armv7l/wheel/Mikado/loci/transcript_methods 2023-09-09T11:00:03,028 copying build/lib.linux-armv7l-cpython-311/Mikado/loci/transcript_methods/__init__.py -> build/bdist.linux-armv7l/wheel/Mikado/loci/transcript_methods 2023-09-09T11:00:03,030 copying build/lib.linux-armv7l-cpython-311/Mikado/loci/transcript_methods/retrieval.py -> build/bdist.linux-armv7l/wheel/Mikado/loci/transcript_methods 2023-09-09T11:00:03,033 copying build/lib.linux-armv7l-cpython-311/Mikado/loci/transcript_methods/splitting.py -> build/bdist.linux-armv7l/wheel/Mikado/loci/transcript_methods 2023-09-09T11:00:03,037 copying build/lib.linux-armv7l-cpython-311/Mikado/loci/transcript.py -> build/bdist.linux-armv7l/wheel/Mikado/loci 2023-09-09T11:00:03,045 copying build/lib.linux-armv7l-cpython-311/Mikado/loci/sublocus.py -> build/bdist.linux-armv7l/wheel/Mikado/loci 2023-09-09T11:00:03,091 copying build/lib.linux-armv7l-cpython-311/Mikado/loci/__init__.py -> build/bdist.linux-armv7l/wheel/Mikado/loci 2023-09-09T11:00:03,093 copying build/lib.linux-armv7l-cpython-311/Mikado/loci/transcriptchecker.py -> build/bdist.linux-armv7l/wheel/Mikado/loci 2023-09-09T11:00:03,096 copying build/lib.linux-armv7l-cpython-311/Mikado/loci/reference_gene.py -> build/bdist.linux-armv7l/wheel/Mikado/loci 2023-09-09T11:00:03,099 copying build/lib.linux-armv7l-cpython-311/Mikado/loci/locus.py -> build/bdist.linux-armv7l/wheel/Mikado/loci 2023-09-09T11:00:03,102 copying build/lib.linux-armv7l-cpython-311/Mikado/loci/clique_methods.py -> build/bdist.linux-armv7l/wheel/Mikado/loci 2023-09-09T11:00:03,104 creating build/bdist.linux-armv7l/wheel/Mikado/preparation 2023-09-09T11:00:03,106 copying build/lib.linux-armv7l-cpython-311/Mikado/preparation/checking.py -> build/bdist.linux-armv7l/wheel/Mikado/preparation 2023-09-09T11:00:03,109 copying build/lib.linux-armv7l-cpython-311/Mikado/preparation/__init__.py -> build/bdist.linux-armv7l/wheel/Mikado/preparation 2023-09-09T11:00:03,112 copying build/lib.linux-armv7l-cpython-311/Mikado/preparation/prepare.py -> build/bdist.linux-armv7l/wheel/Mikado/preparation 2023-09-09T11:00:03,115 copying build/lib.linux-armv7l-cpython-311/Mikado/preparation/annotation_parser.py -> build/bdist.linux-armv7l/wheel/Mikado/preparation 2023-09-09T11:00:03,118 creating build/bdist.linux-armv7l/wheel/Mikado/parsers 2023-09-09T11:00:03,119 copying build/lib.linux-armv7l-cpython-311/Mikado/parsers/blast_xml.py -> build/bdist.linux-armv7l/wheel/Mikado/parsers 2023-09-09T11:00:03,122 copying build/lib.linux-armv7l-cpython-311/Mikado/parsers/GTF.py -> build/bdist.linux-armv7l/wheel/Mikado/parsers 2023-09-09T11:00:03,124 copying build/lib.linux-armv7l-cpython-311/Mikado/parsers/blast_utils.py -> build/bdist.linux-armv7l/wheel/Mikado/parsers 2023-09-09T11:00:03,127 copying build/lib.linux-armv7l-cpython-311/Mikado/parsers/bed12.py -> build/bdist.linux-armv7l/wheel/Mikado/parsers 2023-09-09T11:00:03,130 copying build/lib.linux-armv7l-cpython-311/Mikado/parsers/GFF.py -> build/bdist.linux-armv7l/wheel/Mikado/parsers 2023-09-09T11:00:03,132 copying build/lib.linux-armv7l-cpython-311/Mikado/parsers/__init__.py -> build/bdist.linux-armv7l/wheel/Mikado/parsers 2023-09-09T11:00:03,134 copying build/lib.linux-armv7l-cpython-311/Mikado/parsers/gfannotation.py -> build/bdist.linux-armv7l/wheel/Mikado/parsers 2023-09-09T11:00:03,137 creating build/bdist.linux-armv7l/wheel/Mikado/subprograms 2023-09-09T11:00:03,137 copying build/lib.linux-armv7l-cpython-311/Mikado/subprograms/serialise.py -> build/bdist.linux-armv7l/wheel/Mikado/subprograms 2023-09-09T11:00:03,140 copying build/lib.linux-armv7l-cpython-311/Mikado/subprograms/pick.py -> build/bdist.linux-armv7l/wheel/Mikado/subprograms 2023-09-09T11:00:03,143 creating build/bdist.linux-armv7l/wheel/Mikado/subprograms/util 2023-09-09T11:00:03,144 copying build/lib.linux-armv7l-cpython-311/Mikado/subprograms/util/merge_blast.py -> build/bdist.linux-armv7l/wheel/Mikado/subprograms/util 2023-09-09T11:00:03,146 copying build/lib.linux-armv7l-cpython-311/Mikado/subprograms/util/grep.py -> build/bdist.linux-armv7l/wheel/Mikado/subprograms/util 2023-09-09T11:00:03,149 copying build/lib.linux-armv7l-cpython-311/Mikado/subprograms/util/awk_gtf.py -> build/bdist.linux-armv7l/wheel/Mikado/subprograms/util 2023-09-09T11:00:03,153 copying build/lib.linux-armv7l-cpython-311/Mikado/subprograms/util/trim.py -> build/bdist.linux-armv7l/wheel/Mikado/subprograms/util 2023-09-09T11:00:03,156 copying build/lib.linux-armv7l-cpython-311/Mikado/subprograms/util/metrics.py -> build/bdist.linux-armv7l/wheel/Mikado/subprograms/util 2023-09-09T11:00:03,158 copying build/lib.linux-armv7l-cpython-311/Mikado/subprograms/util/convert.py -> build/bdist.linux-armv7l/wheel/Mikado/subprograms/util 2023-09-09T11:00:03,160 copying build/lib.linux-armv7l-cpython-311/Mikado/subprograms/util/__init__.py -> build/bdist.linux-armv7l/wheel/Mikado/subprograms/util 2023-09-09T11:00:03,162 copying build/lib.linux-armv7l-cpython-311/Mikado/subprograms/util/stats.py -> build/bdist.linux-armv7l/wheel/Mikado/subprograms/util 2023-09-09T11:00:03,165 copying build/lib.linux-armv7l-cpython-311/Mikado/subprograms/compare.py -> build/bdist.linux-armv7l/wheel/Mikado/subprograms 2023-09-09T11:00:03,167 copying build/lib.linux-armv7l-cpython-311/Mikado/subprograms/__main__.py -> build/bdist.linux-armv7l/wheel/Mikado/subprograms 2023-09-09T11:00:03,169 copying build/lib.linux-armv7l-cpython-311/Mikado/subprograms/__init__.py -> build/bdist.linux-armv7l/wheel/Mikado/subprograms 2023-09-09T11:00:03,171 copying build/lib.linux-armv7l-cpython-311/Mikado/subprograms/prepare.py -> build/bdist.linux-armv7l/wheel/Mikado/subprograms 2023-09-09T11:00:03,174 copying build/lib.linux-armv7l-cpython-311/Mikado/subprograms/configure.py -> build/bdist.linux-armv7l/wheel/Mikado/subprograms 2023-09-09T11:00:03,177 creating build/bdist.linux-armv7l/wheel/Mikado/scales 2023-09-09T11:00:03,178 copying build/lib.linux-armv7l-cpython-311/Mikado/scales/f1.pyx -> build/bdist.linux-armv7l/wheel/Mikado/scales 2023-09-09T11:00:03,180 copying build/lib.linux-armv7l-cpython-311/Mikado/scales/assigner.py -> build/bdist.linux-armv7l/wheel/Mikado/scales 2023-09-09T11:00:03,183 copying build/lib.linux-armv7l-cpython-311/Mikado/scales/contrast.pyx -> build/bdist.linux-armv7l/wheel/Mikado/scales 2023-09-09T11:00:03,185 copying build/lib.linux-armv7l-cpython-311/Mikado/scales/f1.c -> build/bdist.linux-armv7l/wheel/Mikado/scales 2023-09-09T11:00:03,192 copying build/lib.linux-armv7l-cpython-311/Mikado/scales/f1.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/Mikado/scales 2023-09-09T11:00:03,198 copying build/lib.linux-armv7l-cpython-311/Mikado/scales/compare.py -> build/bdist.linux-armv7l/wheel/Mikado/scales 2023-09-09T11:00:03,200 copying build/lib.linux-armv7l-cpython-311/Mikado/scales/resultstorer.py -> build/bdist.linux-armv7l/wheel/Mikado/scales 2023-09-09T11:00:03,202 copying build/lib.linux-armv7l-cpython-311/Mikado/scales/contrast.pxd -> build/bdist.linux-armv7l/wheel/Mikado/scales 2023-09-09T11:00:03,203 copying build/lib.linux-armv7l-cpython-311/Mikado/scales/f1.pxd -> build/bdist.linux-armv7l/wheel/Mikado/scales 2023-09-09T11:00:03,205 copying build/lib.linux-armv7l-cpython-311/Mikado/scales/__init__.py -> build/bdist.linux-armv7l/wheel/Mikado/scales 2023-09-09T11:00:03,207 copying build/lib.linux-armv7l-cpython-311/Mikado/scales/contrast.c -> build/bdist.linux-armv7l/wheel/Mikado/scales 2023-09-09T11:00:03,232 copying build/lib.linux-armv7l-cpython-311/Mikado/scales/contrast.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/Mikado/scales 2023-09-09T11:00:03,247 copying build/lib.linux-armv7l-cpython-311/Mikado/scales/accountant.py -> build/bdist.linux-armv7l/wheel/Mikado/scales 2023-09-09T11:00:03,251 copying build/lib.linux-armv7l-cpython-311/Mikado/__init__.py -> build/bdist.linux-armv7l/wheel/Mikado 2023-09-09T11:00:03,254 creating build/bdist.linux-armv7l/wheel/Mikado/picking 2023-09-09T11:00:03,256 copying build/lib.linux-armv7l-cpython-311/Mikado/picking/picker.py -> build/bdist.linux-armv7l/wheel/Mikado/picking 2023-09-09T11:00:03,261 copying build/lib.linux-armv7l-cpython-311/Mikado/picking/loci_processer.py -> build/bdist.linux-armv7l/wheel/Mikado/picking 2023-09-09T11:00:03,266 copying build/lib.linux-armv7l-cpython-311/Mikado/picking/__init__.py -> build/bdist.linux-armv7l/wheel/Mikado/picking 2023-09-09T11:00:03,269 creating build/bdist.linux-armv7l/wheel/Mikado/configuration 2023-09-09T11:00:03,271 copying build/lib.linux-armv7l-cpython-311/Mikado/configuration/requirements_blueprint.json -> build/bdist.linux-armv7l/wheel/Mikado/configuration 2023-09-09T11:00:03,273 copying build/lib.linux-armv7l-cpython-311/Mikado/configuration/daijin_schema.json -> build/bdist.linux-armv7l/wheel/Mikado/configuration 2023-09-09T11:00:03,277 copying build/lib.linux-armv7l-cpython-311/Mikado/configuration/__init__.py -> build/bdist.linux-armv7l/wheel/Mikado/configuration 2023-09-09T11:00:03,280 creating build/bdist.linux-armv7l/wheel/Mikado/configuration/scoring_files 2023-09-09T11:00:03,282 copying build/lib.linux-armv7l-cpython-311/Mikado/configuration/scoring_files/insects.yaml -> build/bdist.linux-armv7l/wheel/Mikado/configuration/scoring_files 2023-09-09T11:00:03,285 copying build/lib.linux-armv7l-cpython-311/Mikado/configuration/scoring_files/human.yaml -> build/bdist.linux-armv7l/wheel/Mikado/configuration/scoring_files 2023-09-09T11:00:03,288 copying build/lib.linux-armv7l-cpython-311/Mikado/configuration/scoring_files/worm.yaml -> build/bdist.linux-armv7l/wheel/Mikado/configuration/scoring_files 2023-09-09T11:00:03,290 copying build/lib.linux-armv7l-cpython-311/Mikado/configuration/scoring_files/plants.yaml -> build/bdist.linux-armv7l/wheel/Mikado/configuration/scoring_files 2023-09-09T11:00:03,293 copying build/lib.linux-armv7l-cpython-311/Mikado/configuration/scoring_files/spombe.yaml -> build/bdist.linux-armv7l/wheel/Mikado/configuration/scoring_files 2023-09-09T11:00:03,296 copying build/lib.linux-armv7l-cpython-311/Mikado/configuration/daijin_configurator.py -> build/bdist.linux-armv7l/wheel/Mikado/configuration 2023-09-09T11:00:03,299 copying build/lib.linux-armv7l-cpython-311/Mikado/configuration/configurator.py -> build/bdist.linux-armv7l/wheel/Mikado/configuration 2023-09-09T11:00:03,303 copying build/lib.linux-armv7l-cpython-311/Mikado/configuration/configuration_blueprint.json -> build/bdist.linux-armv7l/wheel/Mikado/configuration 2023-09-09T11:00:03,307 copying build/lib.linux-armv7l-cpython-311/Mikado/configuration/scoring_blueprint.json -> build/bdist.linux-armv7l/wheel/Mikado/configuration 2023-09-09T11:00:03,311 creating build/bdist.linux-armv7l/wheel/Mikado/daijin 2023-09-09T11:00:03,313 copying build/lib.linux-armv7l-cpython-311/Mikado/daijin/example_config.yaml -> build/bdist.linux-armv7l/wheel/Mikado/daijin 2023-09-09T11:00:03,316 copying build/lib.linux-armv7l-cpython-311/Mikado/daijin/local.yaml -> build/bdist.linux-armv7l/wheel/Mikado/daijin 2023-09-09T11:00:03,318 copying build/lib.linux-armv7l-cpython-311/Mikado/daijin/hpc.yaml -> build/bdist.linux-armv7l/wheel/Mikado/daijin 2023-09-09T11:00:03,320 copying build/lib.linux-armv7l-cpython-311/Mikado/daijin/hpc.json -> build/bdist.linux-armv7l/wheel/Mikado/daijin 2023-09-09T11:00:03,323 copying build/lib.linux-armv7l-cpython-311/Mikado/daijin/tr.snakefile -> build/bdist.linux-armv7l/wheel/Mikado/daijin 2023-09-09T11:00:03,327 copying build/lib.linux-armv7l-cpython-311/Mikado/daijin/__init__.py -> build/bdist.linux-armv7l/wheel/Mikado/daijin 2023-09-09T11:00:03,330 copying build/lib.linux-armv7l-cpython-311/Mikado/daijin/mikado.snakefile -> build/bdist.linux-armv7l/wheel/Mikado/daijin 2023-09-09T11:00:03,332 copying build/lib.linux-armv7l-cpython-311/Mikado/exceptions.py -> build/bdist.linux-armv7l/wheel/Mikado 2023-09-09T11:00:03,335 creating build/bdist.linux-armv7l/wheel/Mikado/serializers 2023-09-09T11:00:03,336 copying build/lib.linux-armv7l-cpython-311/Mikado/serializers/external.py -> build/bdist.linux-armv7l/wheel/Mikado/serializers 2023-09-09T11:00:03,339 copying build/lib.linux-armv7l-cpython-311/Mikado/serializers/orf.py -> build/bdist.linux-armv7l/wheel/Mikado/serializers 2023-09-09T11:00:03,342 copying build/lib.linux-armv7l-cpython-311/Mikado/serializers/junction.py -> build/bdist.linux-armv7l/wheel/Mikado/serializers 2023-09-09T11:00:03,345 creating build/bdist.linux-armv7l/wheel/Mikado/serializers/blast_serializer 2023-09-09T11:00:03,346 copying build/lib.linux-armv7l-cpython-311/Mikado/serializers/blast_serializer/hit.py -> build/bdist.linux-armv7l/wheel/Mikado/serializers/blast_serializer 2023-09-09T11:00:03,349 copying build/lib.linux-armv7l-cpython-311/Mikado/serializers/blast_serializer/target.py -> build/bdist.linux-armv7l/wheel/Mikado/serializers/blast_serializer 2023-09-09T11:00:03,351 copying build/lib.linux-armv7l-cpython-311/Mikado/serializers/blast_serializer/utils.py -> build/bdist.linux-armv7l/wheel/Mikado/serializers/blast_serializer 2023-09-09T11:00:03,354 copying build/lib.linux-armv7l-cpython-311/Mikado/serializers/blast_serializer/hsp.py -> build/bdist.linux-armv7l/wheel/Mikado/serializers/blast_serializer 2023-09-09T11:00:03,358 copying build/lib.linux-armv7l-cpython-311/Mikado/serializers/blast_serializer/query.py -> build/bdist.linux-armv7l/wheel/Mikado/serializers/blast_serializer 2023-09-09T11:00:03,360 copying build/lib.linux-armv7l-cpython-311/Mikado/serializers/blast_serializer/__init__.py -> build/bdist.linux-armv7l/wheel/Mikado/serializers/blast_serializer 2023-09-09T11:00:03,362 copying build/lib.linux-armv7l-cpython-311/Mikado/serializers/blast_serializer/xml_serialiser.py -> build/bdist.linux-armv7l/wheel/Mikado/serializers/blast_serializer 2023-09-09T11:00:03,366 copying build/lib.linux-armv7l-cpython-311/Mikado/serializers/__init__.py -> build/bdist.linux-armv7l/wheel/Mikado/serializers 2023-09-09T11:00:03,368 creating build/bdist.linux-armv7l/wheel/Mikado/utilities 2023-09-09T11:00:03,370 copying build/lib.linux-armv7l-cpython-311/Mikado/utilities/overlap.c -> build/bdist.linux-armv7l/wheel/Mikado/utilities 2023-09-09T11:00:03,376 copying build/lib.linux-armv7l-cpython-311/Mikado/utilities/overlap.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/Mikado/utilities 2023-09-09T11:00:03,382 copying build/lib.linux-armv7l-cpython-311/Mikado/utilities/intervaltree.c -> build/bdist.linux-armv7l/wheel/Mikado/utilities 2023-09-09T11:00:03,417 copying build/lib.linux-armv7l-cpython-311/Mikado/utilities/overlap.pxd -> build/bdist.linux-armv7l/wheel/Mikado/utilities 2023-09-09T11:00:03,419 copying build/lib.linux-armv7l-cpython-311/Mikado/utilities/intervaltree.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/Mikado/utilities 2023-09-09T11:00:03,433 copying build/lib.linux-armv7l-cpython-311/Mikado/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/Mikado/utilities 2023-09-09T11:00:03,436 copying build/lib.linux-armv7l-cpython-311/Mikado/utilities/dbutils.py -> build/bdist.linux-armv7l/wheel/Mikado/utilities 2023-09-09T11:00:03,438 copying build/lib.linux-armv7l-cpython-311/Mikado/utilities/log_utils.py -> build/bdist.linux-armv7l/wheel/Mikado/utilities 2023-09-09T11:00:03,440 copying build/lib.linux-armv7l-cpython-311/Mikado/utilities/intervaltree.pyx -> build/bdist.linux-armv7l/wheel/Mikado/utilities 2023-09-09T11:00:03,442 copying build/lib.linux-armv7l-cpython-311/Mikado/utilities/overlap.pyx -> build/bdist.linux-armv7l/wheel/Mikado/utilities 2023-09-09T11:00:03,444 running install_egg_info 2023-09-09T11:00:03,474 Copying Mikado.egg-info to build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9-py3.11.egg-info 2023-09-09T11:00:03,488 running install_scripts 2023-09-09T11:00:03,489 creating build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data 2023-09-09T11:00:03,489 creating build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts 2023-09-09T11:00:03,490 copying build/scripts-3.11/asm_collect.py -> build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts 2023-09-09T11:00:03,493 copying build/scripts-3.11/remove_from_embl.py -> build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts 2023-09-09T11:00:03,495 copying build/scripts-3.11/create_model.py -> build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts 2023-09-09T11:00:03,497 copying build/scripts-3.11/grep.py -> build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts 2023-09-09T11:00:03,499 copying build/scripts-3.11/class_run.py -> build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts 2023-09-09T11:00:03,501 copying build/scripts-3.11/split_fasta.py -> build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts 2023-09-09T11:00:03,503 copying build/scripts-3.11/self_training.py -> build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts 2023-09-09T11:00:03,505 copying build/scripts-3.11/trim_long_introns.py -> build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts 2023-09-09T11:00:03,507 copying build/scripts-3.11/analyse_metrics.py -> build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts 2023-09-09T11:00:03,509 copying build/scripts-3.11/bam2gtf.py -> build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts 2023-09-09T11:00:03,511 copying build/scripts-3.11/sanitize_blast_db.py -> build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts 2023-09-09T11:00:03,513 copying build/scripts-3.11/add_transcript_feature_to_gtf.py -> build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts 2023-09-09T11:00:03,515 copying build/scripts-3.11/getFastaFromIds.py -> build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts 2023-09-09T11:00:03,517 copying build/scripts-3.11/align_collect.py -> build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts 2023-09-09T11:00:03,518 copying build/scripts-3.11/merge_junction_bed12.py -> build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts 2023-09-09T11:00:03,520 copying build/scripts-3.11/gffjunc_to_bed12.py -> build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts 2023-09-09T11:00:03,522 changing mode of build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts/asm_collect.py to 755 2023-09-09T11:00:03,523 changing mode of build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts/remove_from_embl.py to 755 2023-09-09T11:00:03,523 changing mode of build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts/create_model.py to 755 2023-09-09T11:00:03,524 changing mode of build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts/grep.py to 755 2023-09-09T11:00:03,524 changing mode of build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts/class_run.py to 755 2023-09-09T11:00:03,525 changing mode of build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts/split_fasta.py to 755 2023-09-09T11:00:03,525 changing mode of build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts/self_training.py to 755 2023-09-09T11:00:03,525 changing mode of build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts/trim_long_introns.py to 755 2023-09-09T11:00:03,526 changing mode of build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts/analyse_metrics.py to 755 2023-09-09T11:00:03,526 changing mode of build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts/bam2gtf.py to 755 2023-09-09T11:00:03,527 changing mode of build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts/sanitize_blast_db.py to 755 2023-09-09T11:00:03,527 changing mode of build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts/add_transcript_feature_to_gtf.py to 755 2023-09-09T11:00:03,527 changing mode of build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts/getFastaFromIds.py to 755 2023-09-09T11:00:03,528 changing mode of build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts/align_collect.py to 755 2023-09-09T11:00:03,528 changing mode of build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts/merge_junction_bed12.py to 755 2023-09-09T11:00:03,529 changing mode of build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.data/scripts/gffjunc_to_bed12.py to 755 2023-09-09T11:00:03,586 creating build/bdist.linux-armv7l/wheel/Mikado-1.0.0b9.dist-info/WHEEL 2023-09-09T11:00:03,588 creating '/tmp/pip-wheel-9t6jnel6/Mikado-1.0.0b9-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-09T11:00:03,591 adding 'Mikado/__init__.py' 2023-09-09T11:00:03,592 adding 'Mikado/exceptions.py' 2023-09-09T11:00:03,594 adding 'Mikado/configuration/__init__.py' 2023-09-09T11:00:03,597 adding 'Mikado/configuration/configuration_blueprint.json' 2023-09-09T11:00:03,600 adding 'Mikado/configuration/configurator.py' 2023-09-09T11:00:03,602 adding 'Mikado/configuration/daijin_configurator.py' 2023-09-09T11:00:03,603 adding 'Mikado/configuration/daijin_schema.json' 2023-09-09T11:00:03,605 adding 'Mikado/configuration/requirements_blueprint.json' 2023-09-09T11:00:03,606 adding 'Mikado/configuration/scoring_blueprint.json' 2023-09-09T11:00:03,608 adding 'Mikado/configuration/scoring_files/human.yaml' 2023-09-09T11:00:03,609 adding 'Mikado/configuration/scoring_files/insects.yaml' 2023-09-09T11:00:03,610 adding 'Mikado/configuration/scoring_files/plants.yaml' 2023-09-09T11:00:03,612 adding 'Mikado/configuration/scoring_files/spombe.yaml' 2023-09-09T11:00:03,613 adding 'Mikado/configuration/scoring_files/worm.yaml' 2023-09-09T11:00:03,616 adding 'Mikado/daijin/__init__.py' 2023-09-09T11:00:03,618 adding 'Mikado/daijin/example_config.yaml' 2023-09-09T11:00:03,619 adding 'Mikado/daijin/hpc.json' 2023-09-09T11:00:03,620 adding 'Mikado/daijin/hpc.yaml' 2023-09-09T11:00:03,622 adding 'Mikado/daijin/local.yaml' 2023-09-09T11:00:03,623 adding 'Mikado/daijin/mikado.snakefile' 2023-09-09T11:00:03,627 adding 'Mikado/daijin/tr.snakefile' 2023-09-09T11:00:03,629 adding 'Mikado/loci/__init__.py' 2023-09-09T11:00:03,633 adding 'Mikado/loci/abstractlocus.py' 2023-09-09T11:00:03,636 adding 'Mikado/loci/clique_methods.py' 2023-09-09T11:00:03,637 adding 'Mikado/loci/excluded.py' 2023-09-09T11:00:03,642 adding 'Mikado/loci/locus.py' 2023-09-09T11:00:03,644 adding 'Mikado/loci/monosublocus.py' 2023-09-09T11:00:03,646 adding 'Mikado/loci/monosublocusholder.py' 2023-09-09T11:00:03,648 adding 'Mikado/loci/reference_gene.py' 2023-09-09T11:00:03,651 adding 'Mikado/loci/sublocus.py' 2023-09-09T11:00:03,657 adding 'Mikado/loci/superlocus.py' 2023-09-09T11:00:03,668 adding 'Mikado/loci/transcript.py' 2023-09-09T11:00:03,671 adding 'Mikado/loci/transcriptchecker.py' 2023-09-09T11:00:03,672 adding 'Mikado/loci/transcript_methods/__init__.py' 2023-09-09T11:00:03,675 adding 'Mikado/loci/transcript_methods/finalizing.py' 2023-09-09T11:00:03,677 adding 'Mikado/loci/transcript_methods/printing.py' 2023-09-09T11:00:03,681 adding 'Mikado/loci/transcript_methods/retrieval.py' 2023-09-09T11:00:03,685 adding 'Mikado/loci/transcript_methods/splitting.py' 2023-09-09T11:00:03,687 adding 'Mikado/parsers/GFF.py' 2023-09-09T11:00:03,689 adding 'Mikado/parsers/GTF.py' 2023-09-09T11:00:03,691 adding 'Mikado/parsers/__init__.py' 2023-09-09T11:00:03,694 adding 'Mikado/parsers/bed12.py' 2023-09-09T11:00:03,696 adding 'Mikado/parsers/blast_utils.py' 2023-09-09T11:00:03,701 adding 'Mikado/parsers/blast_xml.py' 2023-09-09T11:00:03,703 adding 'Mikado/parsers/gfannotation.py' 2023-09-09T11:00:03,704 adding 'Mikado/picking/__init__.py' 2023-09-09T11:00:03,708 adding 'Mikado/picking/loci_processer.py' 2023-09-09T11:00:03,713 adding 'Mikado/picking/picker.py' 2023-09-09T11:00:03,715 adding 'Mikado/preparation/__init__.py' 2023-09-09T11:00:03,717 adding 'Mikado/preparation/annotation_parser.py' 2023-09-09T11:00:03,719 adding 'Mikado/preparation/checking.py' 2023-09-09T11:00:03,721 adding 'Mikado/preparation/prepare.py' 2023-09-09T11:00:03,723 adding 'Mikado/scales/__init__.py' 2023-09-09T11:00:03,727 adding 'Mikado/scales/accountant.py' 2023-09-09T11:00:03,732 adding 'Mikado/scales/assigner.py' 2023-09-09T11:00:03,734 adding 'Mikado/scales/compare.py' 2023-09-09T11:00:03,778 adding 'Mikado/scales/contrast.c' 2023-09-09T11:00:03,889 adding 'Mikado/scales/contrast.cpython-311-arm-linux-gnueabihf.so' 2023-09-09T11:00:03,894 adding 'Mikado/scales/contrast.pxd' 2023-09-09T11:00:03,897 adding 'Mikado/scales/contrast.pyx' 2023-09-09T11:00:03,922 adding 'Mikado/scales/f1.c' 2023-09-09T11:00:03,961 adding 'Mikado/scales/f1.cpython-311-arm-linux-gnueabihf.so' 2023-09-09T11:00:03,963 adding 'Mikado/scales/f1.pxd' 2023-09-09T11:00:03,964 adding 'Mikado/scales/f1.pyx' 2023-09-09T11:00:03,966 adding 'Mikado/scales/resultstorer.py' 2023-09-09T11:00:03,967 adding 'Mikado/serializers/__init__.py' 2023-09-09T11:00:03,969 adding 'Mikado/serializers/external.py' 2023-09-09T11:00:03,971 adding 'Mikado/serializers/junction.py' 2023-09-09T11:00:03,973 adding 'Mikado/serializers/orf.py' 2023-09-09T11:00:03,974 adding 'Mikado/serializers/blast_serializer/__init__.py' 2023-09-09T11:00:03,976 adding 'Mikado/serializers/blast_serializer/hit.py' 2023-09-09T11:00:03,978 adding 'Mikado/serializers/blast_serializer/hsp.py' 2023-09-09T11:00:03,979 adding 'Mikado/serializers/blast_serializer/query.py' 2023-09-09T11:00:03,981 adding 'Mikado/serializers/blast_serializer/target.py' 2023-09-09T11:00:03,982 adding 'Mikado/serializers/blast_serializer/utils.py' 2023-09-09T11:00:03,986 adding 'Mikado/serializers/blast_serializer/xml_serialiser.py' 2023-09-09T11:00:03,988 adding 'Mikado/subprograms/__init__.py' 2023-09-09T11:00:03,989 adding 'Mikado/subprograms/__main__.py' 2023-09-09T11:00:03,991 adding 'Mikado/subprograms/compare.py' 2023-09-09T11:00:03,993 adding 'Mikado/subprograms/configure.py' 2023-09-09T11:00:03,995 adding 'Mikado/subprograms/pick.py' 2023-09-09T11:00:03,997 adding 'Mikado/subprograms/prepare.py' 2023-09-09T11:00:04,000 adding 'Mikado/subprograms/serialise.py' 2023-09-09T11:00:04,002 adding 'Mikado/subprograms/util/__init__.py' 2023-09-09T11:00:04,003 adding 'Mikado/subprograms/util/awk_gtf.py' 2023-09-09T11:00:04,004 adding 'Mikado/subprograms/util/convert.py' 2023-09-09T11:00:04,006 adding 'Mikado/subprograms/util/grep.py' 2023-09-09T11:00:04,007 adding 'Mikado/subprograms/util/merge_blast.py' 2023-09-09T11:00:04,008 adding 'Mikado/subprograms/util/metrics.py' 2023-09-09T11:00:04,012 adding 'Mikado/subprograms/util/stats.py' 2023-09-09T11:00:04,014 adding 'Mikado/subprograms/util/trim.py' 2023-09-09T11:00:04,016 adding 'Mikado/tests/__init__.py' 2023-09-09T11:00:04,019 adding 'Mikado/tests/assigner_tester.py' 2023-09-09T11:00:04,908 adding 'Mikado/tests/chr5.fas.gz' 2023-09-09T11:00:04,975 adding 'Mikado/tests/configuration.yaml' 2023-09-09T11:00:04,977 adding 'Mikado/tests/cufflinks.gtf' 2023-09-09T11:00:04,978 adding 'Mikado/tests/genome.fai' 2023-09-09T11:00:04,980 adding 'Mikado/tests/intervaltree_tests.py' 2023-09-09T11:00:04,985 adding 'Mikado/tests/junctions.bed' 2023-09-09T11:00:04,989 adding 'Mikado/tests/locus_tester.py' 2023-09-09T11:00:05,013 adding 'Mikado/tests/mikado.blast.asn.gz' 2023-09-09T11:00:05,068 adding 'Mikado/tests/mikado.blast.xml' 2023-09-09T11:00:05,364 adding 'Mikado/tests/mikado.db' 2023-09-09T11:00:05,381 adding 'Mikado/tests/mikado_prepared.gtf' 2023-09-09T11:00:05,387 adding 'Mikado/tests/orf_tester.py' 2023-09-09T11:00:05,389 adding 'Mikado/tests/parser_testing.py' 2023-09-09T11:00:05,390 adding 'Mikado/tests/plants.suspicious_requirement.yaml' 2023-09-09T11:00:05,391 adding 'Mikado/tests/plants.yaml~' 2023-09-09T11:00:05,392 adding 'Mikado/tests/test_abstractlocus.py' 2023-09-09T11:00:05,394 adding 'Mikado/tests/test_blast_related.py' 2023-09-09T11:00:05,395 adding 'Mikado/tests/test_clique_methods.py' 2023-09-09T11:00:05,396 adding 'Mikado/tests/test_db_utils.py' 2023-09-09T11:00:05,397 adding 'Mikado/tests/test_excluded.py' 2023-09-09T11:00:05,398 adding 'Mikado/tests/test_external_scores.py' 2023-09-09T11:00:05,400 adding 'Mikado/tests/test_gene.py' 2023-09-09T11:00:05,401 adding 'Mikado/tests/test_invalid_orfs.py' 2023-09-09T11:00:05,402 adding 'Mikado/tests/test_json.py' 2023-09-09T11:00:05,404 adding 'Mikado/tests/test_metrics.py' 2023-09-09T11:00:05,405 adding 'Mikado/tests/test_modifications.py' 2023-09-09T11:00:05,407 adding 'Mikado/tests/test_serialisation.py' 2023-09-09T11:00:05,408 adding 'Mikado/tests/test_splitting.py' 2023-09-09T11:00:05,411 adding 'Mikado/tests/test_system_calls.py' 2023-09-09T11:00:05,413 adding 'Mikado/tests/test_transcript_checker.py' 2023-09-09T11:00:05,415 adding 'Mikado/tests/test_transcript_methods.py' 2023-09-09T11:00:05,418 adding 'Mikado/tests/transcript_tester_negative.py' 2023-09-09T11:00:05,422 adding 'Mikado/tests/transcript_tester_positive.py' 2023-09-09T11:00:05,425 adding 'Mikado/tests/transcript_tester_single.py' 2023-09-09T11:00:05,427 adding 'Mikado/tests/trinity.cDNA_match.gff3' 2023-09-09T11:00:05,429 adding 'Mikado/tests/trinity.gff3' 2023-09-09T11:00:05,432 adding 'Mikado/tests/trinity.gtf' 2023-09-09T11:00:05,434 adding 'Mikado/tests/trinity.match_matchpart.gff3' 2023-09-09T11:00:05,435 adding 'Mikado/tests/trinity_stats.txt' 2023-09-09T11:00:06,163 adding 'Mikado/tests/uniprot_sprot_plants.fasta.gz' 2023-09-09T11:00:06,218 adding 'Mikado/tests/utilities_tester.py' 2023-09-09T11:00:06,220 adding 'Mikado/tests/__pycache__/__init__.cpython-34.pyc' 2023-09-09T11:00:06,222 adding 'Mikado/tests/__pycache__/__init__.cpython-35.pyc' 2023-09-09T11:00:06,226 adding 'Mikado/tests/__pycache__/assigner_tester.cpython-34.pyc' 2023-09-09T11:00:06,231 adding 'Mikado/tests/__pycache__/assigner_tester.cpython-35.pyc' 2023-09-09T11:00:06,233 adding 'Mikado/tests/__pycache__/intervaltree_tests.cpython-34.pyc' 2023-09-09T11:00:06,235 adding 'Mikado/tests/__pycache__/intervaltree_tests.cpython-35.pyc' 2023-09-09T11:00:06,240 adding 'Mikado/tests/__pycache__/locus_tester.cpython-34.pyc' 2023-09-09T11:00:06,246 adding 'Mikado/tests/__pycache__/locus_tester.cpython-35.pyc' 2023-09-09T11:00:06,252 adding 'Mikado/tests/__pycache__/orf_tester.cpython-34.pyc' 2023-09-09T11:00:06,258 adding 'Mikado/tests/__pycache__/orf_tester.cpython-35.pyc' 2023-09-09T11:00:06,259 adding 'Mikado/tests/__pycache__/parser_testing.cpython-34.pyc' 2023-09-09T11:00:06,261 adding 'Mikado/tests/__pycache__/parser_testing.cpython-35.pyc' 2023-09-09T11:00:06,262 adding 'Mikado/tests/__pycache__/phases_checker.cpython-34.pyc' 2023-09-09T11:00:06,264 adding 'Mikado/tests/__pycache__/phases_checker.cpython-35.pyc' 2023-09-09T11:00:06,266 adding 'Mikado/tests/__pycache__/system_checks.cpython-35.pyc' 2023-09-09T11:00:06,268 adding 'Mikado/tests/__pycache__/test_abstractlocus.cpython-34.pyc' 2023-09-09T11:00:06,269 adding 'Mikado/tests/__pycache__/test_abstractlocus.cpython-35.pyc' 2023-09-09T11:00:06,270 adding 'Mikado/tests/__pycache__/test_blast_related.cpython-34.pyc' 2023-09-09T11:00:06,272 adding 'Mikado/tests/__pycache__/test_blast_related.cpython-35.pyc' 2023-09-09T11:00:06,273 adding 'Mikado/tests/__pycache__/test_clique_methods.cpython-34.pyc' 2023-09-09T11:00:06,274 adding 'Mikado/tests/__pycache__/test_clique_methods.cpython-35.pyc' 2023-09-09T11:00:06,276 adding 'Mikado/tests/__pycache__/test_db_utils.cpython-34.pyc' 2023-09-09T11:00:06,277 adding 'Mikado/tests/__pycache__/test_db_utils.cpython-35.pyc' 2023-09-09T11:00:06,278 adding 'Mikado/tests/__pycache__/test_excluded.cpython-34.pyc' 2023-09-09T11:00:06,280 adding 'Mikado/tests/__pycache__/test_excluded.cpython-35.pyc' 2023-09-09T11:00:06,281 adding 'Mikado/tests/__pycache__/test_external_scores.cpython-35.pyc' 2023-09-09T11:00:06,282 adding 'Mikado/tests/__pycache__/test_gene.cpython-34.pyc' 2023-09-09T11:00:06,284 adding 'Mikado/tests/__pycache__/test_gene.cpython-35.pyc' 2023-09-09T11:00:06,285 adding 'Mikado/tests/__pycache__/test_invalid_orfs.cpython-34.pyc' 2023-09-09T11:00:06,287 adding 'Mikado/tests/__pycache__/test_invalid_orfs.cpython-35.pyc' 2023-09-09T11:00:06,288 adding 'Mikado/tests/__pycache__/test_json.cpython-35.pyc' 2023-09-09T11:00:06,290 adding 'Mikado/tests/__pycache__/test_metrics.cpython-34.pyc' 2023-09-09T11:00:06,291 adding 'Mikado/tests/__pycache__/test_metrics.cpython-35.pyc' 2023-09-09T11:00:06,293 adding 'Mikado/tests/__pycache__/test_modifications.cpython-34.pyc' 2023-09-09T11:00:06,294 adding 'Mikado/tests/__pycache__/test_modifications.cpython-35.pyc' 2023-09-09T11:00:06,296 adding 'Mikado/tests/__pycache__/test_serialisation.cpython-34.pyc' 2023-09-09T11:00:06,298 adding 'Mikado/tests/__pycache__/test_serialisation.cpython-35.pyc' 2023-09-09T11:00:06,300 adding 'Mikado/tests/__pycache__/test_splitting.cpython-34.pyc' 2023-09-09T11:00:06,302 adding 'Mikado/tests/__pycache__/test_splitting.cpython-35.pyc' 2023-09-09T11:00:06,306 adding 'Mikado/tests/__pycache__/test_system_calls.cpython-35.pyc' 2023-09-09T11:00:06,308 adding 'Mikado/tests/__pycache__/test_transcript_checker.cpython-34.pyc' 2023-09-09T11:00:06,310 adding 'Mikado/tests/__pycache__/test_transcript_checker.cpython-35.pyc' 2023-09-09T11:00:06,312 adding 'Mikado/tests/__pycache__/test_transcript_methods.cpython-34.pyc' 2023-09-09T11:00:06,315 adding 'Mikado/tests/__pycache__/test_transcript_methods.cpython-35.pyc' 2023-09-09T11:00:06,318 adding 'Mikado/tests/__pycache__/transcript_tester_negative.cpython-34.pyc' 2023-09-09T11:00:06,321 adding 'Mikado/tests/__pycache__/transcript_tester_negative.cpython-35.pyc' 2023-09-09T11:00:06,326 adding 'Mikado/tests/__pycache__/transcript_tester_positive.cpython-34.pyc' 2023-09-09T11:00:06,332 adding 'Mikado/tests/__pycache__/transcript_tester_positive.cpython-35.pyc' 2023-09-09T11:00:06,336 adding 'Mikado/tests/__pycache__/transcript_tester_single.cpython-34.pyc' 2023-09-09T11:00:06,340 adding 'Mikado/tests/__pycache__/transcript_tester_single.cpython-35.pyc' 2023-09-09T11:00:06,343 adding 'Mikado/tests/__pycache__/utilities_tester.cpython-34.pyc' 2023-09-09T11:00:06,345 adding 'Mikado/tests/__pycache__/utilities_tester.cpython-35.pyc' 2023-09-09T11:00:06,347 adding 'Mikado/tests/fusion_test/fusion_test.log' 2023-09-09T11:00:06,349 adding 'Mikado/tests/fusion_test/fusion_test_pred.gtf' 2023-09-09T11:00:06,350 adding 'Mikado/tests/fusion_test/fusion_test_ref.gff3' 2023-09-09T11:00:06,353 adding 'Mikado/utilities/__init__.py' 2023-09-09T11:00:06,354 adding 'Mikado/utilities/dbutils.py' 2023-09-09T11:00:06,417 adding 'Mikado/utilities/intervaltree.c' 2023-09-09T11:00:06,587 adding 'Mikado/utilities/intervaltree.cpython-311-arm-linux-gnueabihf.so' 2023-09-09T11:00:06,596 adding 'Mikado/utilities/intervaltree.pyx' 2023-09-09T11:00:06,598 adding 'Mikado/utilities/log_utils.py' 2023-09-09T11:00:06,623 adding 'Mikado/utilities/overlap.c' 2023-09-09T11:00:06,666 adding 'Mikado/utilities/overlap.cpython-311-arm-linux-gnueabihf.so' 2023-09-09T11:00:06,668 adding 'Mikado/utilities/overlap.pxd' 2023-09-09T11:00:06,670 adding 'Mikado/utilities/overlap.pyx' 2023-09-09T11:00:06,672 adding 'Mikado-1.0.0b9.data/scripts/add_transcript_feature_to_gtf.py' 2023-09-09T11:00:06,673 adding 'Mikado-1.0.0b9.data/scripts/align_collect.py' 2023-09-09T11:00:06,674 adding 'Mikado-1.0.0b9.data/scripts/analyse_metrics.py' 2023-09-09T11:00:06,676 adding 'Mikado-1.0.0b9.data/scripts/asm_collect.py' 2023-09-09T11:00:06,677 adding 'Mikado-1.0.0b9.data/scripts/bam2gtf.py' 2023-09-09T11:00:06,678 adding 'Mikado-1.0.0b9.data/scripts/class_run.py' 2023-09-09T11:00:06,680 adding 'Mikado-1.0.0b9.data/scripts/create_model.py' 2023-09-09T11:00:06,681 adding 'Mikado-1.0.0b9.data/scripts/getFastaFromIds.py' 2023-09-09T11:00:06,683 adding 'Mikado-1.0.0b9.data/scripts/gffjunc_to_bed12.py' 2023-09-09T11:00:06,684 adding 'Mikado-1.0.0b9.data/scripts/grep.py' 2023-09-09T11:00:06,685 adding 'Mikado-1.0.0b9.data/scripts/merge_junction_bed12.py' 2023-09-09T11:00:06,687 adding 'Mikado-1.0.0b9.data/scripts/remove_from_embl.py' 2023-09-09T11:00:06,688 adding 'Mikado-1.0.0b9.data/scripts/sanitize_blast_db.py' 2023-09-09T11:00:06,690 adding 'Mikado-1.0.0b9.data/scripts/self_training.py' 2023-09-09T11:00:06,691 adding 'Mikado-1.0.0b9.data/scripts/split_fasta.py' 2023-09-09T11:00:06,693 adding 'Mikado-1.0.0b9.data/scripts/trim_long_introns.py' 2023-09-09T11:00:06,695 adding 'Mikado-1.0.0b9.dist-info/AUTHORS' 2023-09-09T11:00:06,696 adding 'Mikado-1.0.0b9.dist-info/METADATA' 2023-09-09T11:00:06,697 adding 'Mikado-1.0.0b9.dist-info/WHEEL' 2023-09-09T11:00:06,698 adding 'Mikado-1.0.0b9.dist-info/entry_points.txt' 2023-09-09T11:00:06,699 adding 'Mikado-1.0.0b9.dist-info/top_level.txt' 2023-09-09T11:00:06,702 adding 'Mikado-1.0.0b9.dist-info/RECORD' 2023-09-09T11:00:06,887 removing build/bdist.linux-armv7l/wheel 2023-09-09T11:00:07,099 Building wheel for mikado (setup.py): finished with status 'done' 2023-09-09T11:00:07,306 Created wheel for mikado: filename=Mikado-1.0.0b9-cp311-cp311-linux_armv7l.whl size=17383905 sha256=ed7e4964520403c9d79c191483d7a3d9ad8e0b35b77eae60f39cd0f1b5d70b0e 2023-09-09T11:00:07,308 Stored in directory: /tmp/pip-ephem-wheel-cache-_5uvtyus/wheels/b9/5d/3e/463e6e79524711b32d4cc9e3ceea59ffb97587dc15859af034 2023-09-09T11:00:07,330 Successfully built mikado 2023-09-09T11:00:08,044 Removed build tracker: '/tmp/pip-build-tracker-i22an8ns'