2023-09-09T19:11:19,266 Created temporary directory: /tmp/pip-build-tracker-p034fw_c
2023-09-09T19:11:19,267 Initialized build tracking at /tmp/pip-build-tracker-p034fw_c
2023-09-09T19:11:19,267 Created build tracker: /tmp/pip-build-tracker-p034fw_c
2023-09-09T19:11:19,268 Entered build tracker: /tmp/pip-build-tracker-p034fw_c
2023-09-09T19:11:19,269 Created temporary directory: /tmp/pip-wheel-d6h030jf
2023-09-09T19:11:19,272 Created temporary directory: /tmp/pip-ephem-wheel-cache-ilkab2im
2023-09-09T19:11:19,293 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-09T19:11:19,297 2 location(s) to search for versions of mitre:
2023-09-09T19:11:19,297 * https://pypi.org/simple/mitre/
2023-09-09T19:11:19,297 * https://www.piwheels.org/simple/mitre/
2023-09-09T19:11:19,298 Fetching project page and analyzing links: https://pypi.org/simple/mitre/
2023-09-09T19:11:19,299 Getting page https://pypi.org/simple/mitre/
2023-09-09T19:11:19,300 Found index url https://pypi.org/simple/
2023-09-09T19:11:19,442 Fetched page https://pypi.org/simple/mitre/ as application/vnd.pypi.simple.v1+json
2023-09-09T19:11:19,445   Skipping link: No binaries permitted for mitre: https://files.pythonhosted.org/packages/59/f6/233a0adc07eaf97d28545b7f42f8c3bd3a6cd6f98179e644e75257ea869b/mitre-0.9b1-cp27-cp27m-macosx_10_6_x86_64.whl (from https://pypi.org/simple/mitre/)
2023-09-09T19:11:19,445   Found link https://files.pythonhosted.org/packages/e0/1b/72d62c2071b3918a614f0f5ad86bcc286aa7ebdf598541bef16a47805c3c/mitre-0.9b1.tar.gz (from https://pypi.org/simple/mitre/), version: 0.9b1
2023-09-09T19:11:19,446   Skipping link: No binaries permitted for mitre: https://files.pythonhosted.org/packages/47/14/38f5abf9aabdc12a77be89fbd69618cc833a9e9d4c2c81ba7b3d66f2babd/mitre-0.9b2-cp27-cp27m-macosx_10_6_x86_64.whl (from https://pypi.org/simple/mitre/)
2023-09-09T19:11:19,447   Found link https://files.pythonhosted.org/packages/e2/be/1cbf4e1220038645f8a9bb4fa0d6aefb99aef36100b221a6c35ce117dce9/mitre-0.9b2.tar.gz (from https://pypi.org/simple/mitre/), version: 0.9b2
2023-09-09T19:11:19,447   Skipping link: No binaries permitted for mitre: https://files.pythonhosted.org/packages/07/a1/111c00ce0ab5508eb79f5375ca0fee326ce76b5800a53995018d7b80fb47/mitre-0.9b3-cp27-cp27m-macosx_10_6_x86_64.whl (from https://pypi.org/simple/mitre/)
2023-09-09T19:11:19,448   Found link https://files.pythonhosted.org/packages/41/36/690c959ee7ca63b3c7703a4f0bd5cc6295b9628fa0667ca53f0a900a0e37/mitre-0.9b3.tar.gz (from https://pypi.org/simple/mitre/), version: 0.9b3
2023-09-09T19:11:19,449   Skipping link: No binaries permitted for mitre: https://files.pythonhosted.org/packages/6a/24/8151e74639efbec4abc53d046b077bc30a8030f0a4ed05f341896d08310f/mitre-0.9b4-cp27-cp27m-macosx_10_6_x86_64.whl (from https://pypi.org/simple/mitre/)
2023-09-09T19:11:19,449   Found link https://files.pythonhosted.org/packages/5a/b9/ef6ba6d02cb43873415935aac15ae0af557bc19c68670a4df756a2d19cc4/mitre-0.9b4.tar.gz (from https://pypi.org/simple/mitre/), version: 0.9b4
2023-09-09T19:11:19,450   Skipping link: No binaries permitted for mitre: https://files.pythonhosted.org/packages/68/39/26cccdca887c89b2e366625711f0447880aa99e424e35fa0767f5f5e6005/mitre-0.9b5-cp27-cp27m-macosx_10_6_x86_64.whl (from https://pypi.org/simple/mitre/)
2023-09-09T19:11:19,451   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/c4/15/1344c018f16ea96f6563f2f783d516efb34ddc67d8b50e95ca55da75e7ce/mitre-0.9b5-py2.7-linux-x86_64.egg (from https://pypi.org/simple/mitre/)
2023-09-09T19:11:19,451   Found link https://files.pythonhosted.org/packages/41/10/68a541b0441229176bfddd44dca10efb6f400b54c099f9645a3f8c1e73bc/mitre-0.9b5.tar.gz (from https://pypi.org/simple/mitre/), version: 0.9b5
2023-09-09T19:11:19,452   Found link https://files.pythonhosted.org/packages/66/c8/d9202a5a72c7d28913017486124273a60a53ab428c956c169784dccc6cb6/mitre-1.0b1.tar.gz (from https://pypi.org/simple/mitre/), version: 1.0b1
2023-09-09T19:11:19,453 Fetching project page and analyzing links: https://www.piwheels.org/simple/mitre/
2023-09-09T19:11:19,454 Getting page https://www.piwheels.org/simple/mitre/
2023-09-09T19:11:19,455 Found index url https://www.piwheels.org/simple/
2023-09-09T19:11:19,915 Fetched page https://www.piwheels.org/simple/mitre/ as text/html
2023-09-09T19:11:19,927   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b1-cp34-cp34m-linux_armv6l.whl#sha256=bfb358058f7b74bd7382e4f832f5627cc4256b4268ee568e8622df1da356a87a (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,927   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b1-cp34-cp34m-linux_armv7l.whl#sha256=bfb358058f7b74bd7382e4f832f5627cc4256b4268ee568e8622df1da356a87a (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,928   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b1-cp35-cp35m-linux_armv6l.whl#sha256=6190c26108d42de0a3b22358abc67762aee61d4162b7911a8ff99aecec5759fd (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,928   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b1-cp35-cp35m-linux_armv7l.whl#sha256=6190c26108d42de0a3b22358abc67762aee61d4162b7911a8ff99aecec5759fd (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,929   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b1-cp37-cp37m-linux_armv6l.whl#sha256=c3282d147e0962e11d98d3b8742fe05a92e0060d36b7bda86435fdfc109d6ff3 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,929   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b1-cp37-cp37m-linux_armv7l.whl#sha256=c3282d147e0962e11d98d3b8742fe05a92e0060d36b7bda86435fdfc109d6ff3 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,930   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b1-cp39-cp39-linux_armv6l.whl#sha256=91fb9c82f5fb8a587ad7052a90c4737999eeb2cad3362fa70cc4cde81e1e3fd9 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,931   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b1-cp39-cp39-linux_armv7l.whl#sha256=91fb9c82f5fb8a587ad7052a90c4737999eeb2cad3362fa70cc4cde81e1e3fd9 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,931   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b2-cp34-cp34m-linux_armv6l.whl#sha256=95d4041b86655691dc4db5d9290ef62d4d6b27d3d95e60c9f7bf90082088b414 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,932   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b2-cp34-cp34m-linux_armv7l.whl#sha256=95d4041b86655691dc4db5d9290ef62d4d6b27d3d95e60c9f7bf90082088b414 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,933   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b2-cp35-cp35m-linux_armv6l.whl#sha256=ca1f465a44a41a9c3adc4c326ed2492fc05a6114761e8f0f188f20d341c0328d (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,933   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b2-cp35-cp35m-linux_armv7l.whl#sha256=ca1f465a44a41a9c3adc4c326ed2492fc05a6114761e8f0f188f20d341c0328d (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,934   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b2-cp37-cp37m-linux_armv6l.whl#sha256=a6bc34245279b59a64469012f7421d80492c6c9fa23e52a4eb406af0a0673746 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,934   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b2-cp37-cp37m-linux_armv7l.whl#sha256=a6bc34245279b59a64469012f7421d80492c6c9fa23e52a4eb406af0a0673746 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,935   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b2-cp39-cp39-linux_armv6l.whl#sha256=e357a5e5bb99e15de1e48b038d1e7e529157a982855c13bb9104554f3a6a4b96 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,935   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b2-cp39-cp39-linux_armv7l.whl#sha256=e357a5e5bb99e15de1e48b038d1e7e529157a982855c13bb9104554f3a6a4b96 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,936   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b3-cp34-cp34m-linux_armv6l.whl#sha256=be764640c5eed610e6be535ccea2bffdcb926318c1302572464f5f0ab967f353 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,937   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b3-cp34-cp34m-linux_armv7l.whl#sha256=be764640c5eed610e6be535ccea2bffdcb926318c1302572464f5f0ab967f353 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,937   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b3-cp35-cp35m-linux_armv6l.whl#sha256=100934cf7a6511ebd3e27d8ea87fe89e2129503bad7b6c12aba9a7f7d3f9eaeb (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,938   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b3-cp35-cp35m-linux_armv7l.whl#sha256=100934cf7a6511ebd3e27d8ea87fe89e2129503bad7b6c12aba9a7f7d3f9eaeb (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,938   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b3-cp37-cp37m-linux_armv6l.whl#sha256=bd6fef5b4dea820b078f13e7a3bc52d6e4dfbe0c7a25934ed117731f4e9fa58b (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,938   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b3-cp37-cp37m-linux_armv7l.whl#sha256=bd6fef5b4dea820b078f13e7a3bc52d6e4dfbe0c7a25934ed117731f4e9fa58b (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,939   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b3-cp39-cp39-linux_armv6l.whl#sha256=277d37bb3170a42acdbc123b2db9ed311c3eb9d6dfc9b3a0f27180aa1feb8e20 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,939   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b3-cp39-cp39-linux_armv7l.whl#sha256=277d37bb3170a42acdbc123b2db9ed311c3eb9d6dfc9b3a0f27180aa1feb8e20 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,940   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b4-cp34-cp34m-linux_armv6l.whl#sha256=27cc16875eaa745fc0ef078c85733c1628990f39da85101b7be72ddce6538e9f (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,940   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b4-cp34-cp34m-linux_armv7l.whl#sha256=27cc16875eaa745fc0ef078c85733c1628990f39da85101b7be72ddce6538e9f (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,941   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b4-cp35-cp35m-linux_armv6l.whl#sha256=f969ddf593dcaac4fab422cec1baf928a2817eb7df21811097553472d297b73d (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,942   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b4-cp35-cp35m-linux_armv7l.whl#sha256=f969ddf593dcaac4fab422cec1baf928a2817eb7df21811097553472d297b73d (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,942   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b4-cp37-cp37m-linux_armv6l.whl#sha256=31e7d6f46b91ea02695731c7df337d442dd72c09d3d077b804c6b2735bfdd5c5 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,943   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b4-cp37-cp37m-linux_armv7l.whl#sha256=31e7d6f46b91ea02695731c7df337d442dd72c09d3d077b804c6b2735bfdd5c5 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,943   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b5-cp34-cp34m-linux_armv6l.whl#sha256=722fa89ee5a6344b04655c7d3cada6ef54138428013820b076c0990e24219ece (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,944   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b5-cp34-cp34m-linux_armv7l.whl#sha256=722fa89ee5a6344b04655c7d3cada6ef54138428013820b076c0990e24219ece (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,945   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b5-cp35-cp35m-linux_armv6l.whl#sha256=d9f570a12e8ae2539d8dc328d694402f010e55b8a16b0bd1bba9d19744eec839 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,945   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b5-cp35-cp35m-linux_armv7l.whl#sha256=d9f570a12e8ae2539d8dc328d694402f010e55b8a16b0bd1bba9d19744eec839 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,945   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b5-cp37-cp37m-linux_armv6l.whl#sha256=4b36f8eb7f6daebd469d1fd74fac3f5e25a4c1295281233fab0c9168c9dc6559 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,946   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b5-cp37-cp37m-linux_armv7l.whl#sha256=4b36f8eb7f6daebd469d1fd74fac3f5e25a4c1295281233fab0c9168c9dc6559 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,946   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b5-cp39-cp39-linux_armv6l.whl#sha256=72dd3963e3f14d6e8b9ced9d59c24b949c070dcec53f91e339eb4c5708dc7233 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,947   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-0.9b5-cp39-cp39-linux_armv7l.whl#sha256=72dd3963e3f14d6e8b9ced9d59c24b949c070dcec53f91e339eb4c5708dc7233 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,947   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-1.0b1-cp34-cp34m-linux_armv6l.whl#sha256=c3d1f7e0803ce02b413e067d684c8351fd348869d6fc9c7a39541eefcb7f16ec (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,948   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-1.0b1-cp34-cp34m-linux_armv7l.whl#sha256=c3d1f7e0803ce02b413e067d684c8351fd348869d6fc9c7a39541eefcb7f16ec (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,949   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-1.0b1-cp35-cp35m-linux_armv6l.whl#sha256=10f4e2b732c240f1489d0cce35b9f2fa5aeb32cb4a8d2bc8205f649209c8c829 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,949   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-1.0b1-cp35-cp35m-linux_armv7l.whl#sha256=10f4e2b732c240f1489d0cce35b9f2fa5aeb32cb4a8d2bc8205f649209c8c829 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,950   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-1.0b1-cp37-cp37m-linux_armv6l.whl#sha256=f6b9b58771d1e721b86177b02ccf669cf154473b8d53595638a6880543c24933 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,950   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-1.0b1-cp37-cp37m-linux_armv7l.whl#sha256=f6b9b58771d1e721b86177b02ccf669cf154473b8d53595638a6880543c24933 (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,951   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-1.0b1-cp39-cp39-linux_armv6l.whl#sha256=1a37af90ea65672c4e28cb660625a1a65d99864bc753ffcd68a9575a5bbfde4e (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,952   Skipping link: No binaries permitted for mitre: https://www.piwheels.org/simple/mitre/mitre-1.0b1-cp39-cp39-linux_armv7l.whl#sha256=1a37af90ea65672c4e28cb660625a1a65d99864bc753ffcd68a9575a5bbfde4e (from https://www.piwheels.org/simple/mitre/)
2023-09-09T19:11:19,953 Skipping link: not a file: https://www.piwheels.org/simple/mitre/
2023-09-09T19:11:19,953 Skipping link: not a file: https://pypi.org/simple/mitre/
2023-09-09T19:11:19,972 Given no hashes to check 1 links for project 'mitre': discarding no candidates
2023-09-09T19:11:19,990 Collecting mitre==0.9b4
2023-09-09T19:11:19,992   Created temporary directory: /tmp/pip-unpack-_isrvl53
2023-09-09T19:11:20,590   Downloading mitre-0.9b4.tar.gz (9.5 MB)
2023-09-09T19:11:25,366   Added mitre==0.9b4 from https://files.pythonhosted.org/packages/5a/b9/ef6ba6d02cb43873415935aac15ae0af557bc19c68670a4df756a2d19cc4/mitre-0.9b4.tar.gz to build tracker '/tmp/pip-build-tracker-p034fw_c'
2023-09-09T19:11:25,367   Running setup.py (path:/tmp/pip-wheel-d6h030jf/mitre_0a7f3ddc5b5b4ef6bfa4cb68c9b52673/setup.py) egg_info for package mitre
2023-09-09T19:11:25,368   Created temporary directory: /tmp/pip-pip-egg-info-ucrweph_
2023-09-09T19:11:25,369   Preparing metadata (setup.py): started
2023-09-09T19:11:25,370   Running command python setup.py egg_info
2023-09-09T19:11:26,000   /tmp/pip-wheel-d6h030jf/mitre_0a7f3ddc5b5b4ef6bfa4cb68c9b52673/setup.py:4: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html
2023-09-09T19:11:26,001     import pkg_resources
2023-09-09T19:11:26,228   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-09T19:11:26,229   !!

2023-09-09T19:11:26,230           ********************************************************************************
2023-09-09T19:11:26,231           Usage of dash-separated 'description-file' will not be supported in future
2023-09-09T19:11:26,231           versions. Please use the underscore name 'description_file' instead.

2023-09-09T19:11:26,232           By 2023-Sep-26, you need to update your project and remove deprecated calls
2023-09-09T19:11:26,233           or your builds will no longer be supported.

2023-09-09T19:11:26,234           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-09T19:11:26,235           ********************************************************************************

2023-09-09T19:11:26,236   !!
2023-09-09T19:11:26,237     opt = self.warn_dash_deprecation(opt, section)
2023-09-09T19:11:26,394   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:320: InformationOnly: Normalizing '0.9beta4' to '0.9b4'
2023-09-09T19:11:26,395     self.metadata.version = self._normalize_version(
2023-09-09T19:11:26,440   running egg_info
2023-09-09T19:11:26,442   creating /tmp/pip-pip-egg-info-ucrweph_/mitre.egg-info
2023-09-09T19:11:26,466   writing /tmp/pip-pip-egg-info-ucrweph_/mitre.egg-info/PKG-INFO
2023-09-09T19:11:26,469   writing dependency_links to /tmp/pip-pip-egg-info-ucrweph_/mitre.egg-info/dependency_links.txt
2023-09-09T19:11:26,471   writing entry points to /tmp/pip-pip-egg-info-ucrweph_/mitre.egg-info/entry_points.txt
2023-09-09T19:11:26,473   writing requirements to /tmp/pip-pip-egg-info-ucrweph_/mitre.egg-info/requires.txt
2023-09-09T19:11:26,474   writing top-level names to /tmp/pip-pip-egg-info-ucrweph_/mitre.egg-info/top_level.txt
2023-09-09T19:11:26,476   writing manifest file '/tmp/pip-pip-egg-info-ucrweph_/mitre.egg-info/SOURCES.txt'
2023-09-09T19:11:26,558   reading manifest file '/tmp/pip-pip-egg-info-ucrweph_/mitre.egg-info/SOURCES.txt'
2023-09-09T19:11:26,560   reading manifest template 'MANIFEST.in'
2023-09-09T19:11:26,580   adding license file 'LICENSE.txt'
2023-09-09T19:11:26,585   writing manifest file '/tmp/pip-pip-egg-info-ucrweph_/mitre.egg-info/SOURCES.txt'
2023-09-09T19:11:26,691   Preparing metadata (setup.py): finished with status 'done'
2023-09-09T19:11:26,696   Source in /tmp/pip-wheel-d6h030jf/mitre_0a7f3ddc5b5b4ef6bfa4cb68c9b52673 has version 0.9b4, which satisfies requirement mitre==0.9b4 from https://files.pythonhosted.org/packages/5a/b9/ef6ba6d02cb43873415935aac15ae0af557bc19c68670a4df756a2d19cc4/mitre-0.9b4.tar.gz
2023-09-09T19:11:26,697   Removed mitre==0.9b4 from https://files.pythonhosted.org/packages/5a/b9/ef6ba6d02cb43873415935aac15ae0af557bc19c68670a4df756a2d19cc4/mitre-0.9b4.tar.gz from build tracker '/tmp/pip-build-tracker-p034fw_c'
2023-09-09T19:11:26,702 Created temporary directory: /tmp/pip-unpack-rykz9y9m
2023-09-09T19:11:26,703 Created temporary directory: /tmp/pip-unpack-iv_v2q1f
2023-09-09T19:11:26,713 Building wheels for collected packages: mitre
2023-09-09T19:11:26,717   Created temporary directory: /tmp/pip-wheel-qkh6xw3h
2023-09-09T19:11:26,718   Building wheel for mitre (setup.py): started
2023-09-09T19:11:26,719   Destination directory: /tmp/pip-wheel-qkh6xw3h
2023-09-09T19:11:26,719   Running command python setup.py bdist_wheel
2023-09-09T19:11:27,356   /tmp/pip-wheel-d6h030jf/mitre_0a7f3ddc5b5b4ef6bfa4cb68c9b52673/setup.py:4: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html
2023-09-09T19:11:27,357     import pkg_resources
2023-09-09T19:11:27,574   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-09T19:11:27,575   !!

2023-09-09T19:11:27,576           ********************************************************************************
2023-09-09T19:11:27,577           Usage of dash-separated 'description-file' will not be supported in future
2023-09-09T19:11:27,578           versions. Please use the underscore name 'description_file' instead.

2023-09-09T19:11:27,579           By 2023-Sep-26, you need to update your project and remove deprecated calls
2023-09-09T19:11:27,581           or your builds will no longer be supported.

2023-09-09T19:11:27,583           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-09T19:11:27,583           ********************************************************************************

2023-09-09T19:11:27,586   !!
2023-09-09T19:11:27,587     opt = self.warn_dash_deprecation(opt, section)
2023-09-09T19:11:27,768   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:320: InformationOnly: Normalizing '0.9beta4' to '0.9b4'
2023-09-09T19:11:27,768     self.metadata.version = self._normalize_version(
2023-09-09T19:11:27,814   running bdist_wheel
2023-09-09T19:11:27,895   running build
2023-09-09T19:11:27,896   running build_py
2023-09-09T19:11:27,924   creating build
2023-09-09T19:11:27,925   creating build/lib.linux-armv7l-cpython-311
2023-09-09T19:11:27,926   creating build/lib.linux-armv7l-cpython-311/mitre
2023-09-09T19:11:27,928   copying mitre/command_line.py -> build/lib.linux-armv7l-cpython-311/mitre
2023-09-09T19:11:27,931   copying mitre/logit_test.py -> build/lib.linux-armv7l-cpython-311/mitre
2023-09-09T19:11:27,933   copying mitre/__init__.py -> build/lib.linux-armv7l-cpython-311/mitre
2023-09-09T19:11:27,936   copying mitre/posterior.py -> build/lib.linux-armv7l-cpython-311/mitre
2023-09-09T19:11:27,943   copying mitre/test.py -> build/lib.linux-armv7l-cpython-311/mitre
2023-09-09T19:11:28,167   copying mitre/main.py -> build/lib.linux-armv7l-cpython-311/mitre
2023-09-09T19:11:28,175   copying mitre/rules.py -> build/lib.linux-armv7l-cpython-311/mitre
2023-09-09T19:11:28,217   copying mitre/visualization.py -> build/lib.linux-armv7l-cpython-311/mitre
2023-09-09T19:11:28,221   copying mitre/key_comparison.py -> build/lib.linux-armv7l-cpython-311/mitre
2023-09-09T19:11:28,225   copying mitre/logit_rule_test.py -> build/lib.linux-armv7l-cpython-311/mitre
2023-09-09T19:11:28,229   copying mitre/mvnpdf_cholesky.py -> build/lib.linux-armv7l-cpython-311/mitre
2023-09-09T19:11:28,235   copying mitre/lambda_quick_test.py -> build/lib.linux-armv7l-cpython-311/mitre
2023-09-09T19:11:28,240   copying mitre/prior_by_primitive.py -> build/lib.linux-armv7l-cpython-311/mitre
2023-09-09T19:11:28,247   copying mitre/logit_rules.py -> build/lib.linux-armv7l-cpython-311/mitre
2023-09-09T19:11:28,255   creating build/lib.linux-armv7l-cpython-311/mitre/data_processing
2023-09-09T19:11:28,257   copying mitre/data_processing/data_processing.py -> build/lib.linux-armv7l-cpython-311/mitre/data_processing
2023-09-09T19:11:28,260   copying mitre/data_processing/synthetic_data.py -> build/lib.linux-armv7l-cpython-311/mitre/data_processing
2023-09-09T19:11:28,262   copying mitre/data_processing/__init__.py -> build/lib.linux-armv7l-cpython-311/mitre/data_processing
2023-09-09T19:11:28,265   copying mitre/data_processing/transforms.py -> build/lib.linux-armv7l-cpython-311/mitre/data_processing
2023-09-09T19:11:28,269   copying mitre/data_processing/sequencing.py -> build/lib.linux-armv7l-cpython-311/mitre/data_processing
2023-09-09T19:11:28,273   copying mitre/data_processing/filtering.py -> build/lib.linux-armv7l-cpython-311/mitre/data_processing
2023-09-09T19:11:28,277   copying mitre/data_processing/crossvalidation.py -> build/lib.linux-armv7l-cpython-311/mitre/data_processing
2023-09-09T19:11:28,280   creating build/lib.linux-armv7l-cpython-311/mitre/load_data
2023-09-09T19:11:28,282   copying mitre/load_data/distance_based.py -> build/lib.linux-armv7l-cpython-311/mitre/load_data
2023-09-09T19:11:28,285   copying mitre/load_data/__init__.py -> build/lib.linux-armv7l-cpython-311/mitre/load_data
2023-09-09T19:11:28,288   copying mitre/load_data/pplacer.py -> build/lib.linux-armv7l-cpython-311/mitre/load_data
2023-09-09T19:11:28,293   copying mitre/load_data/basic.py -> build/lib.linux-armv7l-cpython-311/mitre/load_data
2023-09-09T19:11:28,299   copying mitre/load_data/taxonomy_annotation.py -> build/lib.linux-armv7l-cpython-311/mitre/load_data
2023-09-09T19:11:28,307   creating build/lib.linux-armv7l-cpython-311/mitre/trees
2023-09-09T19:11:28,311   copying mitre/trees/__init__.py -> build/lib.linux-armv7l-cpython-311/mitre/trees
2023-09-09T19:11:28,318   copying mitre/trees/simulators.py -> build/lib.linux-armv7l-cpython-311/mitre/trees
2023-09-09T19:11:28,396   copying mitre/trees/utilities.py -> build/lib.linux-armv7l-cpython-311/mitre/trees
2023-09-09T19:11:28,399   copying mitre/trees/priors.py -> build/lib.linux-armv7l-cpython-311/mitre/trees
2023-09-09T19:11:28,401   creating build/lib.linux-armv7l-cpython-311/mitre/comparison_methods
2023-09-09T19:11:28,403   copying mitre/comparison_methods/__init__.py -> build/lib.linux-armv7l-cpython-311/mitre/comparison_methods
2023-09-09T19:11:28,406   copying mitre/comparison_methods/sklearn_wrappers.py -> build/lib.linux-armv7l-cpython-311/mitre/comparison_methods
2023-09-09T19:11:28,409   running egg_info
2023-09-09T19:11:28,481   writing mitre.egg-info/PKG-INFO
2023-09-09T19:11:28,485   writing dependency_links to mitre.egg-info/dependency_links.txt
2023-09-09T19:11:28,488   writing entry points to mitre.egg-info/entry_points.txt
2023-09-09T19:11:28,489   writing requirements to mitre.egg-info/requires.txt
2023-09-09T19:11:28,491   writing top-level names to mitre.egg-info/top_level.txt
2023-09-09T19:11:28,532   reading manifest file 'mitre.egg-info/SOURCES.txt'
2023-09-09T19:11:28,536   reading manifest template 'MANIFEST.in'
2023-09-09T19:11:28,562   adding license file 'LICENSE.txt'
2023-09-09T19:11:28,567   writing manifest file 'mitre.egg-info/SOURCES.txt'
2023-09-09T19:11:28,570   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'mitre.example_data' is absent from the `packages` configuration.
2023-09-09T19:11:28,570   !!

2023-09-09T19:11:28,572           ********************************************************************************
2023-09-09T19:11:28,572           ############################
2023-09-09T19:11:28,573           # Package would be ignored #
2023-09-09T19:11:28,574           ############################
2023-09-09T19:11:28,575           Python recognizes 'mitre.example_data' as an importable package[^1],
2023-09-09T19:11:28,575           but it is absent from setuptools' `packages` configuration.

2023-09-09T19:11:28,577           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-09T19:11:28,578           package, please make sure that 'mitre.example_data' is explicitly added
2023-09-09T19:11:28,578           to the `packages` configuration field.

2023-09-09T19:11:28,579           Alternatively, you can also rely on setuptools' discovery methods
2023-09-09T19:11:28,580           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-09T19:11:28,580           instead of `find_packages(...)`/`find:`).

2023-09-09T19:11:28,585           You can read more about "package discovery" on setuptools documentation page:

2023-09-09T19:11:28,588           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-09T19:11:28,590           If you don't want 'mitre.example_data' to be distributed and are
2023-09-09T19:11:28,590           already explicitly excluding 'mitre.example_data' via
2023-09-09T19:11:28,591           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-09T19:11:28,592           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-09T19:11:28,593           combination with a more fine grained `package-data` configuration.

2023-09-09T19:11:28,595           You can read more about "package data files" on setuptools documentation page:

2023-09-09T19:11:28,597           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-09T19:11:28,599           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-09T19:11:28,600                 even if it does not contain any `.py` files.
2023-09-09T19:11:28,601                 On the other hand, currently there is no concept of package data
2023-09-09T19:11:28,602                 directory, all directories are treated like packages.
2023-09-09T19:11:28,602           ********************************************************************************

2023-09-09T19:11:28,603   !!
2023-09-09T19:11:28,604     check.warn(importable)
2023-09-09T19:11:28,605   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'mitre.example_data.bokulich' is absent from the `packages` configuration.
2023-09-09T19:11:28,606   !!

2023-09-09T19:11:28,607           ********************************************************************************
2023-09-09T19:11:28,608           ############################
2023-09-09T19:11:28,610           # Package would be ignored #
2023-09-09T19:11:28,610           ############################
2023-09-09T19:11:28,613           Python recognizes 'mitre.example_data.bokulich' as an importable package[^1],
2023-09-09T19:11:28,614           but it is absent from setuptools' `packages` configuration.

2023-09-09T19:11:28,615           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-09T19:11:28,616           package, please make sure that 'mitre.example_data.bokulich' is explicitly added
2023-09-09T19:11:28,616           to the `packages` configuration field.

2023-09-09T19:11:28,618           Alternatively, you can also rely on setuptools' discovery methods
2023-09-09T19:11:28,618           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-09T19:11:28,619           instead of `find_packages(...)`/`find:`).

2023-09-09T19:11:28,620           You can read more about "package discovery" on setuptools documentation page:

2023-09-09T19:11:28,621           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-09T19:11:28,623           If you don't want 'mitre.example_data.bokulich' to be distributed and are
2023-09-09T19:11:28,623           already explicitly excluding 'mitre.example_data.bokulich' via
2023-09-09T19:11:28,624           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-09T19:11:28,625           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-09T19:11:28,626           combination with a more fine grained `package-data` configuration.

2023-09-09T19:11:28,626           You can read more about "package data files" on setuptools documentation page:

2023-09-09T19:11:28,627           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-09T19:11:28,629           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-09T19:11:28,629                 even if it does not contain any `.py` files.
2023-09-09T19:11:28,630                 On the other hand, currently there is no concept of package data
2023-09-09T19:11:28,630                 directory, all directories are treated like packages.
2023-09-09T19:11:28,631           ********************************************************************************

2023-09-09T19:11:28,631   !!
2023-09-09T19:11:28,632     check.warn(importable)
2023-09-09T19:11:28,632   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'mitre.example_data.david' is absent from the `packages` configuration.
2023-09-09T19:11:28,633   !!

2023-09-09T19:11:28,634           ********************************************************************************
2023-09-09T19:11:28,634           ############################
2023-09-09T19:11:28,635           # Package would be ignored #
2023-09-09T19:11:28,635           ############################
2023-09-09T19:11:28,636           Python recognizes 'mitre.example_data.david' as an importable package[^1],
2023-09-09T19:11:28,636           but it is absent from setuptools' `packages` configuration.

2023-09-09T19:11:28,637           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-09T19:11:28,638           package, please make sure that 'mitre.example_data.david' is explicitly added
2023-09-09T19:11:28,639           to the `packages` configuration field.

2023-09-09T19:11:28,640           Alternatively, you can also rely on setuptools' discovery methods
2023-09-09T19:11:28,641           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-09T19:11:28,642           instead of `find_packages(...)`/`find:`).

2023-09-09T19:11:28,643           You can read more about "package discovery" on setuptools documentation page:

2023-09-09T19:11:28,644           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-09T19:11:28,646           If you don't want 'mitre.example_data.david' to be distributed and are
2023-09-09T19:11:28,646           already explicitly excluding 'mitre.example_data.david' via
2023-09-09T19:11:28,647           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-09T19:11:28,648           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-09T19:11:28,648           combination with a more fine grained `package-data` configuration.

2023-09-09T19:11:28,649           You can read more about "package data files" on setuptools documentation page:

2023-09-09T19:11:28,650           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-09T19:11:28,652           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-09T19:11:28,653                 even if it does not contain any `.py` files.
2023-09-09T19:11:28,653                 On the other hand, currently there is no concept of package data
2023-09-09T19:11:28,654                 directory, all directories are treated like packages.
2023-09-09T19:11:28,655           ********************************************************************************

2023-09-09T19:11:28,656   !!
2023-09-09T19:11:28,657     check.warn(importable)
2023-09-09T19:11:28,657   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'mitre.example_data.digiulio' is absent from the `packages` configuration.
2023-09-09T19:11:28,658   !!

2023-09-09T19:11:28,659           ********************************************************************************
2023-09-09T19:11:28,660           ############################
2023-09-09T19:11:28,660           # Package would be ignored #
2023-09-09T19:11:28,661           ############################
2023-09-09T19:11:28,661           Python recognizes 'mitre.example_data.digiulio' as an importable package[^1],
2023-09-09T19:11:28,662           but it is absent from setuptools' `packages` configuration.

2023-09-09T19:11:28,662           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-09T19:11:28,663           package, please make sure that 'mitre.example_data.digiulio' is explicitly added
2023-09-09T19:11:28,664           to the `packages` configuration field.

2023-09-09T19:11:28,665           Alternatively, you can also rely on setuptools' discovery methods
2023-09-09T19:11:28,665           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-09T19:11:28,666           instead of `find_packages(...)`/`find:`).

2023-09-09T19:11:28,667           You can read more about "package discovery" on setuptools documentation page:

2023-09-09T19:11:28,667           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-09T19:11:28,668           If you don't want 'mitre.example_data.digiulio' to be distributed and are
2023-09-09T19:11:28,669           already explicitly excluding 'mitre.example_data.digiulio' via
2023-09-09T19:11:28,669           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-09T19:11:28,670           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-09T19:11:28,670           combination with a more fine grained `package-data` configuration.

2023-09-09T19:11:28,687           You can read more about "package data files" on setuptools documentation page:

2023-09-09T19:11:28,795           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-09T19:11:28,901           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-09T19:11:28,937                 even if it does not contain any `.py` files.
2023-09-09T19:11:28,965                 On the other hand, currently there is no concept of package data
2023-09-09T19:11:28,979                 directory, all directories are treated like packages.
2023-09-09T19:11:28,979           ********************************************************************************

2023-09-09T19:11:28,980   !!
2023-09-09T19:11:28,981     check.warn(importable)
2023-09-09T19:11:28,981   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'mitre.example_data.karelia' is absent from the `packages` configuration.
2023-09-09T19:11:28,982   !!

2023-09-09T19:11:28,983           ********************************************************************************
2023-09-09T19:11:28,984           ############################
2023-09-09T19:11:28,984           # Package would be ignored #
2023-09-09T19:11:28,985           ############################
2023-09-09T19:11:28,985           Python recognizes 'mitre.example_data.karelia' as an importable package[^1],
2023-09-09T19:11:28,986           but it is absent from setuptools' `packages` configuration.

2023-09-09T19:11:28,998           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-09T19:11:29,008           package, please make sure that 'mitre.example_data.karelia' is explicitly added
2023-09-09T19:11:29,009           to the `packages` configuration field.

2023-09-09T19:11:29,011           Alternatively, you can also rely on setuptools' discovery methods
2023-09-09T19:11:29,011           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-09T19:11:29,012           instead of `find_packages(...)`/`find:`).

2023-09-09T19:11:29,014           You can read more about "package discovery" on setuptools documentation page:

2023-09-09T19:11:29,015           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-09T19:11:29,016           If you don't want 'mitre.example_data.karelia' to be distributed and are
2023-09-09T19:11:29,017           already explicitly excluding 'mitre.example_data.karelia' via
2023-09-09T19:11:29,017           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-09T19:11:29,017           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-09T19:11:29,018           combination with a more fine grained `package-data` configuration.

2023-09-09T19:11:29,019           You can read more about "package data files" on setuptools documentation page:

2023-09-09T19:11:29,019           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-09T19:11:29,021           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-09T19:11:29,021                 even if it does not contain any `.py` files.
2023-09-09T19:11:29,021                 On the other hand, currently there is no concept of package data
2023-09-09T19:11:29,022                 directory, all directories are treated like packages.
2023-09-09T19:11:29,022           ********************************************************************************

2023-09-09T19:11:29,023   !!
2023-09-09T19:11:29,024     check.warn(importable)
2023-09-09T19:11:29,024   copying mitre/efficient_likelihoods.c -> build/lib.linux-armv7l-cpython-311/mitre
2023-09-09T19:11:29,025   copying mitre/efficient_likelihoods.pyx -> build/lib.linux-armv7l-cpython-311/mitre
2023-09-09T19:11:29,025   copying mitre/quick_test.cfg -> build/lib.linux-armv7l-cpython-311/mitre
2023-09-09T19:11:29,026   copying mitre/template.html -> build/lib.linux-armv7l-cpython-311/mitre
2023-09-09T19:11:29,026   creating build/lib.linux-armv7l-cpython-311/mitre/example_data
2023-09-09T19:11:29,027   copying mitre/example_data/CITATIONS.txt -> build/lib.linux-armv7l-cpython-311/mitre/example_data
2023-09-09T19:11:29,027   copying mitre/example_data/example_settings.cfg -> build/lib.linux-armv7l-cpython-311/mitre/example_data
2023-09-09T19:11:29,028   creating build/lib.linux-armv7l-cpython-311/mitre/example_data/bokulich
2023-09-09T19:11:29,032   copying mitre/example_data/bokulich/NOTE -> build/lib.linux-armv7l-cpython-311/mitre/example_data/bokulich
2023-09-09T19:11:29,046   copying mitre/example_data/bokulich/abundance.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/bokulich
2023-09-09T19:11:29,065   copying mitre/example_data/bokulich/dada2_placements.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/bokulich
2023-09-09T19:11:29,068   copying mitre/example_data/bokulich/placement.jplace -> build/lib.linux-armv7l-cpython-311/mitre/example_data/bokulich
2023-09-09T19:11:29,071   copying mitre/example_data/bokulich/sample_metadata.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/bokulich
2023-09-09T19:11:29,074   copying mitre/example_data/bokulich/sample_metadata_no_repeats.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/bokulich
2023-09-09T19:11:29,076   copying mitre/example_data/bokulich/seq_info.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/bokulich
2023-09-09T19:11:29,083   copying mitre/example_data/bokulich/sequence_key.fa -> build/lib.linux-armv7l-cpython-311/mitre/example_data/bokulich
2023-09-09T19:11:29,137   copying mitre/example_data/bokulich/subject_data.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/bokulich
2023-09-09T19:11:29,139   copying mitre/example_data/bokulich/taxaTable.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/bokulich
2023-09-09T19:11:29,171   creating build/lib.linux-armv7l-cpython-311/mitre/example_data/david
2023-09-09T19:11:29,173   copying mitre/example_data/david/abundance.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/david
2023-09-09T19:11:29,367   copying mitre/example_data/david/david_long.cfg.lsf -> build/lib.linux-armv7l-cpython-311/mitre/example_data/david
2023-09-09T19:11:29,369   copying mitre/example_data/david/mothur_placements.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/david
2023-09-09T19:11:29,393   copying mitre/example_data/david/placements.jplace -> build/lib.linux-armv7l-cpython-311/mitre/example_data/david
2023-09-09T19:11:29,555   copying mitre/example_data/david/sample_metadata.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/david
2023-09-09T19:11:29,557   copying mitre/example_data/david/seq_info.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/david
2023-09-09T19:11:29,565   copying mitre/example_data/david/sequence_key.fa -> build/lib.linux-armv7l-cpython-311/mitre/example_data/david
2023-09-09T19:11:29,617   copying mitre/example_data/david/subject_data.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/david
2023-09-09T19:11:29,619   copying mitre/example_data/david/taxaTable.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/david
2023-09-09T19:11:29,643   creating build/lib.linux-armv7l-cpython-311/mitre/example_data/digiulio
2023-09-09T19:11:29,644   copying mitre/example_data/digiulio/abundance.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/digiulio
2023-09-09T19:11:29,731   copying mitre/example_data/digiulio/dada2_placements.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/digiulio
2023-09-09T19:11:29,748   copying mitre/example_data/digiulio/placement.jplace -> build/lib.linux-armv7l-cpython-311/mitre/example_data/digiulio
2023-09-09T19:11:29,776   copying mitre/example_data/digiulio/sample_metadata.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/digiulio
2023-09-09T19:11:29,778   copying mitre/example_data/digiulio/seq_info.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/digiulio
2023-09-09T19:11:29,786   copying mitre/example_data/digiulio/sequence_key.fa -> build/lib.linux-armv7l-cpython-311/mitre/example_data/digiulio
2023-09-09T19:11:29,809   copying mitre/example_data/digiulio/subject_data.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/digiulio
2023-09-09T19:11:29,811   copying mitre/example_data/digiulio/taxaTable.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/digiulio
2023-09-09T19:11:29,836   copying mitre/example_data/digiulio/test.cfg.lsf -> build/lib.linux-armv7l-cpython-311/mitre/example_data/digiulio
2023-09-09T19:11:29,838   creating build/lib.linux-armv7l-cpython-311/mitre/example_data/karelia
2023-09-09T19:11:29,839   copying mitre/example_data/karelia/README -> build/lib.linux-armv7l-cpython-311/mitre/example_data/karelia
2023-09-09T19:11:29,841   copying mitre/example_data/karelia/abundance.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/karelia
2023-09-09T19:11:30,102   copying mitre/example_data/karelia/add_any_allergy_variables.py -> build/lib.linux-armv7l-cpython-311/mitre/example_data/karelia
2023-09-09T19:11:30,104   copying mitre/example_data/karelia/dada2_placements.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/karelia
2023-09-09T19:11:30,127   copying mitre/example_data/karelia/placement.jplace -> build/lib.linux-armv7l-cpython-311/mitre/example_data/karelia
2023-09-09T19:11:30,166   copying mitre/example_data/karelia/sample_data.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/karelia
2023-09-09T19:11:30,169   copying mitre/example_data/karelia/sample_metadata.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/karelia
2023-09-09T19:11:30,172   copying mitre/example_data/karelia/seq_info.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/karelia
2023-09-09T19:11:30,180   copying mitre/example_data/karelia/sequence_key.fa -> build/lib.linux-armv7l-cpython-311/mitre/example_data/karelia
2023-09-09T19:11:30,199   copying mitre/example_data/karelia/subject_data.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/karelia
2023-09-09T19:11:30,202   copying mitre/example_data/karelia/subject_data_augmented.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/karelia
2023-09-09T19:11:30,204   copying mitre/example_data/karelia/taxaTable.csv -> build/lib.linux-armv7l-cpython-311/mitre/example_data/karelia
2023-09-09T19:11:30,232   running build_ext
2023-09-09T19:11:30,249   Traceback (most recent call last):
2023-09-09T19:11:30,250     File "/usr/local/lib/python3.11/dist-packages/pkg_resources/__init__.py", line 402, in get_provider
2023-09-09T19:11:30,250       module = sys.modules[moduleOrReq]
2023-09-09T19:11:30,251                ~~~~~~~~~~~^^^^^^^^^^^^^
2023-09-09T19:11:30,251   KeyError: 'numpy'

2023-09-09T19:11:30,252   During handling of the above exception, another exception occurred:

2023-09-09T19:11:30,253   Traceback (most recent call last):
2023-09-09T19:11:30,253     File "/usr/local/lib/python3.11/dist-packages/numpy/core/__init__.py", line 23, in <module>
2023-09-09T19:11:30,254       from . import multiarray
2023-09-09T19:11:30,254     File "/usr/local/lib/python3.11/dist-packages/numpy/core/multiarray.py", line 10, in <module>
2023-09-09T19:11:30,254       from . import overrides
2023-09-09T19:11:30,255     File "/usr/local/lib/python3.11/dist-packages/numpy/core/overrides.py", line 8, in <module>
2023-09-09T19:11:30,255       from numpy.core._multiarray_umath import (
2023-09-09T19:11:30,256   ImportError: libopenblas.so.0: cannot open shared object file: No such file or directory

2023-09-09T19:11:30,257   During handling of the above exception, another exception occurred:

2023-09-09T19:11:30,258   Traceback (most recent call last):
2023-09-09T19:11:30,258     File "<string>", line 2, in <module>
2023-09-09T19:11:30,259     File "<pip-setuptools-caller>", line 34, in <module>
2023-09-09T19:11:30,259     File "/tmp/pip-wheel-d6h030jf/mitre_0a7f3ddc5b5b4ef6bfa4cb68c9b52673/setup.py", line 42, in <module>
2023-09-09T19:11:30,259       setup(
2023-09-09T19:11:30,260     File "/usr/local/lib/python3.11/dist-packages/setuptools/__init__.py", line 103, in setup
2023-09-09T19:11:30,261       return distutils.core.setup(**attrs)
2023-09-09T19:11:30,261              ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T19:11:30,262     File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/core.py", line 185, in setup
2023-09-09T19:11:30,262       return run_commands(dist)
2023-09-09T19:11:30,263              ^^^^^^^^^^^^^^^^^^
2023-09-09T19:11:30,263     File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/core.py", line 201, in run_commands
2023-09-09T19:11:30,264       dist.run_commands()
2023-09-09T19:11:30,265     File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 969, in run_commands
2023-09-09T19:11:30,265       self.run_command(cmd)
2023-09-09T19:11:30,266     File "/usr/local/lib/python3.11/dist-packages/setuptools/dist.py", line 1001, in run_command
2023-09-09T19:11:30,266       super().run_command(command)
2023-09-09T19:11:30,267     File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 988, in run_command
2023-09-09T19:11:30,267       cmd_obj.run()
2023-09-09T19:11:30,268     File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 325, in run
2023-09-09T19:11:30,268       self.run_command("build")
2023-09-09T19:11:30,269     File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py", line 318, in run_command
2023-09-09T19:11:30,270       self.distribution.run_command(command)
2023-09-09T19:11:30,271     File "/usr/local/lib/python3.11/dist-packages/setuptools/dist.py", line 1001, in run_command
2023-09-09T19:11:30,272       super().run_command(command)
2023-09-09T19:11:30,272     File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 988, in run_command
2023-09-09T19:11:30,273       cmd_obj.run()
2023-09-09T19:11:30,274     File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/command/build.py", line 131, in run
2023-09-09T19:11:30,275       self.run_command(cmd_name)
2023-09-09T19:11:30,276     File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py", line 318, in run_command
2023-09-09T19:11:30,277       self.distribution.run_command(command)
2023-09-09T19:11:30,278     File "/usr/local/lib/python3.11/dist-packages/setuptools/dist.py", line 1001, in run_command
2023-09-09T19:11:30,279       super().run_command(command)
2023-09-09T19:11:30,279     File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 988, in run_command
2023-09-09T19:11:30,280       cmd_obj.run()
2023-09-09T19:11:30,281     File "/usr/local/lib/python3.11/dist-packages/setuptools/command/build_ext.py", line 88, in run
2023-09-09T19:11:30,281       _build_ext.run(self)
2023-09-09T19:11:30,282     File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/command/build_ext.py", line 345, in run
2023-09-09T19:11:30,283       self.build_extensions()
2023-09-09T19:11:30,283     File "/tmp/pip-wheel-d6h030jf/mitre_0a7f3ddc5b5b4ef6bfa4cb68c9b52673/setup.py", line 29, in build_extensions
2023-09-09T19:11:30,284       numpy_incl = pkg_resources.resource_filename('numpy', 'core/include')
2023-09-09T19:11:30,284                    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T19:11:30,285     File "/usr/local/lib/python3.11/dist-packages/pkg_resources/__init__.py", line 1213, in resource_filename
2023-09-09T19:11:30,286       return get_provider(package_or_requirement).get_resource_filename(
2023-09-09T19:11:30,286              ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T19:11:30,287     File "/usr/local/lib/python3.11/dist-packages/pkg_resources/__init__.py", line 404, in get_provider
2023-09-09T19:11:30,288       __import__(moduleOrReq)
2023-09-09T19:11:30,288     File "/usr/local/lib/python3.11/dist-packages/numpy/__init__.py", line 139, in <module>
2023-09-09T19:11:30,289       from . import core
2023-09-09T19:11:30,290     File "/usr/local/lib/python3.11/dist-packages/numpy/core/__init__.py", line 49, in <module>
2023-09-09T19:11:30,291       raise ImportError(msg)
2023-09-09T19:11:30,292   ImportError:

2023-09-09T19:11:30,293   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!

2023-09-09T19:11:30,295   Importing the numpy C-extensions failed. This error can happen for
2023-09-09T19:11:30,296   many reasons, often due to issues with your setup or how NumPy was
2023-09-09T19:11:30,297   installed.

2023-09-09T19:11:30,299   We have compiled some common reasons and troubleshooting tips at:

2023-09-09T19:11:30,301       https://numpy.org/devdocs/user/troubleshooting-importerror.html

2023-09-09T19:11:30,303   Please note and check the following:

2023-09-09T19:11:30,304     * The Python version is: Python3.11 from "/usr/bin/python3"
2023-09-09T19:11:30,305     * The NumPy version is: "1.25.2"

2023-09-09T19:11:30,307   and make sure that they are the versions you expect.
2023-09-09T19:11:30,308   Please carefully study the documentation linked above for further help.

2023-09-09T19:11:30,310   Original error was: libopenblas.so.0: cannot open shared object file: No such file or directory

2023-09-09T19:11:30,383   ERROR: [present-rich] python setup.py bdist_wheel exited with 1
2023-09-09T19:11:30,399   [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c '
2023-09-09T19:11:30,399   exec(compile('"'"''"'"''"'"'
2023-09-09T19:11:30,399   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-09T19:11:30,399   #
2023-09-09T19:11:30,399   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-09T19:11:30,399   #   import from `distutils.core` to work with newer packaging standards.
2023-09-09T19:11:30,399   # - It provides a clear error message when setuptools is not installed.
2023-09-09T19:11:30,399   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-09T19:11:30,399   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-09T19:11:30,399   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-09T19:11:30,399   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-09T19:11:30,399   import os, sys, tokenize
2023-09-09T19:11:30,399   
2023-09-09T19:11:30,399   try:
2023-09-09T19:11:30,399       import setuptools
2023-09-09T19:11:30,399   except ImportError as error:
2023-09-09T19:11:30,399       print(
2023-09-09T19:11:30,399           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-09T19:11:30,399           "the build environment.",
2023-09-09T19:11:30,399           file=sys.stderr,
2023-09-09T19:11:30,399       )
2023-09-09T19:11:30,399       sys.exit(1)
2023-09-09T19:11:30,399   
2023-09-09T19:11:30,399   __file__ = %r
2023-09-09T19:11:30,399   sys.argv[0] = __file__
2023-09-09T19:11:30,399   
2023-09-09T19:11:30,399   if os.path.exists(__file__):
2023-09-09T19:11:30,399       filename = __file__
2023-09-09T19:11:30,399       with tokenize.open(__file__) as f:
2023-09-09T19:11:30,399           setup_py_code = f.read()
2023-09-09T19:11:30,399   else:
2023-09-09T19:11:30,399       filename = "<auto-generated setuptools caller>"
2023-09-09T19:11:30,399       setup_py_code = "from setuptools import setup; setup()"
2023-09-09T19:11:30,399   
2023-09-09T19:11:30,399   exec(compile(setup_py_code, filename, "exec"))
2023-09-09T19:11:30,399   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-d6h030jf/mitre_0a7f3ddc5b5b4ef6bfa4cb68c9b52673/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' bdist_wheel -d /tmp/pip-wheel-qkh6xw3h[/]
2023-09-09T19:11:30,399   [bold magenta]cwd[/]: /tmp/pip-wheel-d6h030jf/mitre_0a7f3ddc5b5b4ef6bfa4cb68c9b52673/
2023-09-09T19:11:30,400   Building wheel for mitre (setup.py): finished with status 'error'
2023-09-09T19:11:30,401   ERROR: Failed building wheel for mitre
2023-09-09T19:11:30,402   Running setup.py clean for mitre
2023-09-09T19:11:30,404   Running command python setup.py clean
2023-09-09T19:11:31,044   /tmp/pip-wheel-d6h030jf/mitre_0a7f3ddc5b5b4ef6bfa4cb68c9b52673/setup.py:4: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html
2023-09-09T19:11:31,044     import pkg_resources
2023-09-09T19:11:31,240   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-09T19:11:31,241   !!

2023-09-09T19:11:31,242           ********************************************************************************
2023-09-09T19:11:31,243           Usage of dash-separated 'description-file' will not be supported in future
2023-09-09T19:11:31,243           versions. Please use the underscore name 'description_file' instead.

2023-09-09T19:11:31,244           By 2023-Sep-26, you need to update your project and remove deprecated calls
2023-09-09T19:11:31,245           or your builds will no longer be supported.

2023-09-09T19:11:31,246           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-09T19:11:31,247           ********************************************************************************

2023-09-09T19:11:31,248   !!
2023-09-09T19:11:31,249     opt = self.warn_dash_deprecation(opt, section)
2023-09-09T19:11:31,393   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:320: InformationOnly: Normalizing '0.9beta4' to '0.9b4'
2023-09-09T19:11:31,394     self.metadata.version = self._normalize_version(
2023-09-09T19:11:31,432   running clean
2023-09-09T19:11:31,477   removing 'build/lib.linux-armv7l-cpython-311' (and everything under it)
2023-09-09T19:11:31,536   'build/bdist.linux-armv7l' does not exist -- can't clean it
2023-09-09T19:11:31,536   'build/scripts-3.11' does not exist -- can't clean it
2023-09-09T19:11:31,537   removing 'build'
2023-09-09T19:11:31,642 Failed to build mitre
2023-09-09T19:11:31,643 ERROR: Failed to build one or more wheels
2023-09-09T19:11:31,645 Exception information:
2023-09-09T19:11:31,645 Traceback (most recent call last):
2023-09-09T19:11:31,645   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-09T19:11:31,645     status = run_func(*args)
2023-09-09T19:11:31,645              ^^^^^^^^^^^^^^^
2023-09-09T19:11:31,645   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-09T19:11:31,645     return func(self, options, args)
2023-09-09T19:11:31,645            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T19:11:31,645   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 181, in run
2023-09-09T19:11:31,645     raise CommandError("Failed to build one or more wheels")
2023-09-09T19:11:31,645 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2023-09-09T19:11:31,648 Removed build tracker: '/tmp/pip-build-tracker-p034fw_c'