2023-09-10T13:27:22,196 Created temporary directory: /tmp/pip-build-tracker-vxb_4dwa 2023-09-10T13:27:22,197 Initialized build tracking at /tmp/pip-build-tracker-vxb_4dwa 2023-09-10T13:27:22,197 Created build tracker: /tmp/pip-build-tracker-vxb_4dwa 2023-09-10T13:27:22,198 Entered build tracker: /tmp/pip-build-tracker-vxb_4dwa 2023-09-10T13:27:22,198 Created temporary directory: /tmp/pip-wheel-uovruoyf 2023-09-10T13:27:22,202 Created temporary directory: /tmp/pip-ephem-wheel-cache-ph74ke6m 2023-09-10T13:27:22,226 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-10T13:27:22,229 2 location(s) to search for versions of ampal: 2023-09-10T13:27:22,229 * https://pypi.org/simple/ampal/ 2023-09-10T13:27:22,229 * https://www.piwheels.org/simple/ampal/ 2023-09-10T13:27:22,230 Fetching project page and analyzing links: https://pypi.org/simple/ampal/ 2023-09-10T13:27:22,231 Getting page https://pypi.org/simple/ampal/ 2023-09-10T13:27:22,232 Found index url https://pypi.org/simple/ 2023-09-10T13:27:22,374 Fetched page https://pypi.org/simple/ampal/ as application/vnd.pypi.simple.v1+json 2023-09-10T13:27:22,376 Found link https://files.pythonhosted.org/packages/3f/e5/03da3a77bba138c165451d3f8efb7fd32818aea4a6212b420c558e9088d8/AMPAL-1.0.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.0.0 2023-09-10T13:27:22,377 Found link https://files.pythonhosted.org/packages/c2/90/2aecb8bdeab8de4f896f38fc792b434292f0f96a86cd3b860c849f4cfd55/AMPAL-1.0.1.tar.gz (from https://pypi.org/simple/ampal/), version: 1.0.1 2023-09-10T13:27:22,378 Found link https://files.pythonhosted.org/packages/29/39/ac32680ba515731a81942c3a1bb8d0731fc0da02185885794ccf51dd604b/AMPAL-1.1.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.1.0 2023-09-10T13:27:22,378 Found link https://files.pythonhosted.org/packages/f4/11/85ef80392ed433f9024abc0bacc2173dd88ce0e7c42f23b804cc3650b1e5/AMPAL-1.2.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.2.0 2023-09-10T13:27:22,379 Found link https://files.pythonhosted.org/packages/a4/9a/940d9cd5af9177e35487a99bf8bf0ae4c80b28eeca70c266ebc2f341cd4d/AMPAL-1.3.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.3.0 2023-09-10T13:27:22,379 Found link https://files.pythonhosted.org/packages/c9/14/728e14ff9e6c3372082ffc88a2f78016b05143f0d6bee5c432c002314169/AMPAL-1.4.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.4.0 2023-09-10T13:27:22,380 Fetching project page and analyzing links: https://www.piwheels.org/simple/ampal/ 2023-09-10T13:27:22,381 Getting page https://www.piwheels.org/simple/ampal/ 2023-09-10T13:27:22,382 Found index url https://www.piwheels.org/simple/ 2023-09-10T13:27:25,450 Fetched page https://www.piwheels.org/simple/ampal/ as text/html 2023-09-10T13:27:25,477 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp34-cp34m-linux_armv6l.whl#sha256=99efb16db183cae49bf3225252476b2a114aa8202951ad4beedb456705aaa423 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,478 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp34-cp34m-linux_armv7l.whl#sha256=99efb16db183cae49bf3225252476b2a114aa8202951ad4beedb456705aaa423 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,479 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp35-cp35m-linux_armv6l.whl#sha256=39d01a5d76e0da3ee7e6a69b17bbeefe277dfd5078f2ae7e649d278c488c4d8a (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,480 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp35-cp35m-linux_armv7l.whl#sha256=39d01a5d76e0da3ee7e6a69b17bbeefe277dfd5078f2ae7e649d278c488c4d8a (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,480 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp37-cp37m-linux_armv6l.whl#sha256=d5f3cb2f32922d4dba6072abd7d8ff8bd5d6033c3b85e029c87038c636f2a668 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,481 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp37-cp37m-linux_armv7l.whl#sha256=d5f3cb2f32922d4dba6072abd7d8ff8bd5d6033c3b85e029c87038c636f2a668 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,482 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp39-cp39-linux_armv6l.whl#sha256=36203627d34049fa4bd5f68c5ea5982471d2696e71f6ebf3c2f40be512a0ca8f (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,483 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp39-cp39-linux_armv7l.whl#sha256=36203627d34049fa4bd5f68c5ea5982471d2696e71f6ebf3c2f40be512a0ca8f (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,484 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp34-cp34m-linux_armv6l.whl#sha256=bb10a9a83274eed0d19b7f7ae2146a7bdba87f572cee50533a338274ed94d544 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,484 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp34-cp34m-linux_armv7l.whl#sha256=bb10a9a83274eed0d19b7f7ae2146a7bdba87f572cee50533a338274ed94d544 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,485 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp35-cp35m-linux_armv6l.whl#sha256=290476b98c5232b8cfa7da3f3ab55cab1daeee460b5c683a6329c47862e59dd5 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,486 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp35-cp35m-linux_armv7l.whl#sha256=290476b98c5232b8cfa7da3f3ab55cab1daeee460b5c683a6329c47862e59dd5 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,486 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp37-cp37m-linux_armv6l.whl#sha256=b8befab0a05b7736d634a7f279404b076b347db1dd59a43d03b3cbe2a92b26f5 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,487 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp37-cp37m-linux_armv7l.whl#sha256=b8befab0a05b7736d634a7f279404b076b347db1dd59a43d03b3cbe2a92b26f5 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,488 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp39-cp39-linux_armv6l.whl#sha256=aebdb752b6316e4fe49af818624adc8ca4e73cb4b8e6e496b6eb5413e453f395 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,489 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp39-cp39-linux_armv7l.whl#sha256=aebdb752b6316e4fe49af818624adc8ca4e73cb4b8e6e496b6eb5413e453f395 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,489 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp34-cp34m-linux_armv6l.whl#sha256=9b3221fab29e565552ada7c673d9755c2f2471b50f29e9ef750c929b19fa5f89 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,490 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp34-cp34m-linux_armv7l.whl#sha256=9b3221fab29e565552ada7c673d9755c2f2471b50f29e9ef750c929b19fa5f89 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,491 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp35-cp35m-linux_armv6l.whl#sha256=a6ffdf5f12d194952f1aa9b3e71fae04a7d9bef57ac0e1af31093e76746ebf84 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,492 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp35-cp35m-linux_armv7l.whl#sha256=a6ffdf5f12d194952f1aa9b3e71fae04a7d9bef57ac0e1af31093e76746ebf84 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,492 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp37-cp37m-linux_armv6l.whl#sha256=f287657d9a53fd46bb0746640449b12c95fdede071751f9aed47e35abb3b6e4d (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,493 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp37-cp37m-linux_armv7l.whl#sha256=f287657d9a53fd46bb0746640449b12c95fdede071751f9aed47e35abb3b6e4d (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,494 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp39-cp39-linux_armv6l.whl#sha256=51ff0c97bbafd1243a607efae14185a8cded80a107c03a701d6a74f1e8ffdbbc (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,495 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp39-cp39-linux_armv7l.whl#sha256=51ff0c97bbafd1243a607efae14185a8cded80a107c03a701d6a74f1e8ffdbbc (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,496 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp34-cp34m-linux_armv6l.whl#sha256=88138240aa15f771fc6bac93b5091eb076c9a5b2c5b4844f08638fff1ae58fb5 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,496 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp34-cp34m-linux_armv7l.whl#sha256=88138240aa15f771fc6bac93b5091eb076c9a5b2c5b4844f08638fff1ae58fb5 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,497 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp35-cp35m-linux_armv6l.whl#sha256=40eb5738abc65a4ea4a541717a09aca225426c06cb36be6be329b3de73e2064a (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,497 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp35-cp35m-linux_armv7l.whl#sha256=40eb5738abc65a4ea4a541717a09aca225426c06cb36be6be329b3de73e2064a (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,498 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp37-cp37m-linux_armv6l.whl#sha256=fa99b21289c1d1395e7213be1f2da83442d04a06839ddb18055832b8fc0cd147 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,499 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp37-cp37m-linux_armv7l.whl#sha256=fa99b21289c1d1395e7213be1f2da83442d04a06839ddb18055832b8fc0cd147 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,499 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp39-cp39-linux_armv6l.whl#sha256=d90582d5d32b21b4ed8ea8084798413b2b24635c607cadb2e785c6c8507d0ca0 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,500 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp39-cp39-linux_armv7l.whl#sha256=d90582d5d32b21b4ed8ea8084798413b2b24635c607cadb2e785c6c8507d0ca0 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,501 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp34-cp34m-linux_armv6l.whl#sha256=e35e212576d5aafe8cd28110a8749e9c8330d18d904567fa567e7d17c0121091 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,502 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp34-cp34m-linux_armv7l.whl#sha256=e35e212576d5aafe8cd28110a8749e9c8330d18d904567fa567e7d17c0121091 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,503 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp35-cp35m-linux_armv6l.whl#sha256=84f1d2f265bee8d91a8182cab52a64bb290b631ded8787c87d2a5b4a6ceda98f (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,503 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp35-cp35m-linux_armv7l.whl#sha256=84f1d2f265bee8d91a8182cab52a64bb290b631ded8787c87d2a5b4a6ceda98f (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,504 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp37-cp37m-linux_armv6l.whl#sha256=79ae005751058c6d0ae8f07d7c27565b8b7047f7b8ed0958e64d9a4cdc7c01d5 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,505 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp37-cp37m-linux_armv7l.whl#sha256=79ae005751058c6d0ae8f07d7c27565b8b7047f7b8ed0958e64d9a4cdc7c01d5 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,506 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp39-cp39-linux_armv6l.whl#sha256=b73f51fd6feb1fa2d01e8ec866ffb942cfeefb981066f427ed80d707d41fd359 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,506 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp39-cp39-linux_armv7l.whl#sha256=b73f51fd6feb1fa2d01e8ec866ffb942cfeefb981066f427ed80d707d41fd359 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,507 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp34-cp34m-linux_armv6l.whl#sha256=99dc3c2af7219213a309e3f12d2d8c3f934b29c5315b239bb0af9961aa49c08a (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,508 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp34-cp34m-linux_armv7l.whl#sha256=99dc3c2af7219213a309e3f12d2d8c3f934b29c5315b239bb0af9961aa49c08a (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,508 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp35-cp35m-linux_armv6l.whl#sha256=bc4d3ad7d35fa4d09f2e20958dfb1a3f76fd710a23c6c78f6b8c3be0f2e88f7d (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,509 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp35-cp35m-linux_armv7l.whl#sha256=bc4d3ad7d35fa4d09f2e20958dfb1a3f76fd710a23c6c78f6b8c3be0f2e88f7d (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,510 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp37-cp37m-linux_armv6l.whl#sha256=c6a3ec7a4d78a7a62804cd65b6dad03ffa651dc3442bdb707c44724e9d7b3529 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,511 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp37-cp37m-linux_armv7l.whl#sha256=c6a3ec7a4d78a7a62804cd65b6dad03ffa651dc3442bdb707c44724e9d7b3529 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,511 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp39-cp39-linux_armv6l.whl#sha256=cf12ec38c08489ab3442a6bfb22e51ec2ce71637c16664f56a6bbc9b29d183b1 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,512 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp39-cp39-linux_armv7l.whl#sha256=cf12ec38c08489ab3442a6bfb22e51ec2ce71637c16664f56a6bbc9b29d183b1 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T13:27:25,513 Skipping link: not a file: https://www.piwheels.org/simple/ampal/ 2023-09-10T13:27:25,514 Skipping link: not a file: https://pypi.org/simple/ampal/ 2023-09-10T13:27:25,545 Given no hashes to check 1 links for project 'ampal': discarding no candidates 2023-09-10T13:27:25,572 Collecting ampal==1.0.1 2023-09-10T13:27:25,574 Created temporary directory: /tmp/pip-unpack-9_rrfai2 2023-09-10T13:27:26,105 Downloading AMPAL-1.0.1.tar.gz (348 kB) 2023-09-10T13:27:26,374 Added ampal==1.0.1 from https://files.pythonhosted.org/packages/c2/90/2aecb8bdeab8de4f896f38fc792b434292f0f96a86cd3b860c849f4cfd55/AMPAL-1.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-vxb_4dwa' 2023-09-10T13:27:26,376 Running setup.py (path:/tmp/pip-wheel-uovruoyf/ampal_023bc6103e014c6db5dfcfe217e1dd5a/setup.py) egg_info for package ampal 2023-09-10T13:27:26,377 Created temporary directory: /tmp/pip-pip-egg-info-2mu7kbqs 2023-09-10T13:27:26,377 Preparing metadata (setup.py): started 2023-09-10T13:27:26,379 Running command python setup.py egg_info 2023-09-10T13:27:28,590 /usr/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-uovruoyf/ampal_023bc6103e014c6db5dfcfe217e1dd5a/src/ampal/geometry.pyx 2023-09-10T13:27:28,590 tree = Parsing.p_module(s, pxd, full_module_name) 2023-09-10T13:27:31,450 Compiling src/ampal/geometry.pyx because it changed. 2023-09-10T13:27:31,450 [1/1] Cythonizing src/ampal/geometry.pyx 2023-09-10T13:27:31,897 running egg_info 2023-09-10T13:27:31,899 creating /tmp/pip-pip-egg-info-2mu7kbqs/AMPAL.egg-info 2023-09-10T13:27:31,924 writing /tmp/pip-pip-egg-info-2mu7kbqs/AMPAL.egg-info/PKG-INFO 2023-09-10T13:27:31,927 writing dependency_links to /tmp/pip-pip-egg-info-2mu7kbqs/AMPAL.egg-info/dependency_links.txt 2023-09-10T13:27:31,929 writing requirements to /tmp/pip-pip-egg-info-2mu7kbqs/AMPAL.egg-info/requires.txt 2023-09-10T13:27:31,930 writing top-level names to /tmp/pip-pip-egg-info-2mu7kbqs/AMPAL.egg-info/top_level.txt 2023-09-10T13:27:31,932 writing manifest file '/tmp/pip-pip-egg-info-2mu7kbqs/AMPAL.egg-info/SOURCES.txt' 2023-09-10T13:27:32,033 reading manifest file '/tmp/pip-pip-egg-info-2mu7kbqs/AMPAL.egg-info/SOURCES.txt' 2023-09-10T13:27:32,034 reading manifest template 'MANIFEST.in' 2023-09-10T13:27:32,035 warning: no files found matching 'LICENSE.txt' 2023-09-10T13:27:32,054 writing manifest file '/tmp/pip-pip-egg-info-2mu7kbqs/AMPAL.egg-info/SOURCES.txt' 2023-09-10T13:27:32,389 Preparing metadata (setup.py): finished with status 'done' 2023-09-10T13:27:32,393 Source in /tmp/pip-wheel-uovruoyf/ampal_023bc6103e014c6db5dfcfe217e1dd5a has version 1.0.1, which satisfies requirement ampal==1.0.1 from https://files.pythonhosted.org/packages/c2/90/2aecb8bdeab8de4f896f38fc792b434292f0f96a86cd3b860c849f4cfd55/AMPAL-1.0.1.tar.gz 2023-09-10T13:27:32,394 Removed ampal==1.0.1 from https://files.pythonhosted.org/packages/c2/90/2aecb8bdeab8de4f896f38fc792b434292f0f96a86cd3b860c849f4cfd55/AMPAL-1.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-vxb_4dwa' 2023-09-10T13:27:32,398 Created temporary directory: /tmp/pip-unpack-ubx_w_oe 2023-09-10T13:27:32,399 Created temporary directory: /tmp/pip-unpack-r6g_bzts 2023-09-10T13:27:32,406 Building wheels for collected packages: ampal 2023-09-10T13:27:32,409 Created temporary directory: /tmp/pip-wheel-di4h64k0 2023-09-10T13:27:32,410 Building wheel for ampal (setup.py): started 2023-09-10T13:27:32,411 Destination directory: /tmp/pip-wheel-di4h64k0 2023-09-10T13:27:32,412 Running command python setup.py bdist_wheel 2023-09-10T13:27:33,936 running bdist_wheel 2023-09-10T13:27:34,034 running build 2023-09-10T13:27:34,034 running build_py 2023-09-10T13:27:34,061 creating build 2023-09-10T13:27:34,062 creating build/lib.linux-armv7l-cpython-311 2023-09-10T13:27:34,063 creating build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T13:27:34,064 copying src/ampal/assembly.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T13:27:34,067 copying src/ampal/protein.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T13:27:34,070 copying src/ampal/amino_acids.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T13:27:34,072 copying src/ampal/analyse_protein.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T13:27:34,074 copying src/ampal/data.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T13:27:34,076 copying src/ampal/__init__.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T13:27:34,078 copying src/ampal/ligands.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T13:27:34,080 copying src/ampal/nucleic_acid.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T13:27:34,082 copying src/ampal/ampal_warnings.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T13:27:34,083 copying src/ampal/base_ampal.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T13:27:34,086 copying src/ampal/pdb_parser.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T13:27:34,088 copying src/ampal/interactions.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T13:27:34,090 copying src/ampal/pseudo_atoms.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T13:27:34,092 running egg_info 2023-09-10T13:27:34,147 writing src/AMPAL.egg-info/PKG-INFO 2023-09-10T13:27:34,150 writing dependency_links to src/AMPAL.egg-info/dependency_links.txt 2023-09-10T13:27:34,152 writing requirements to src/AMPAL.egg-info/requires.txt 2023-09-10T13:27:34,153 writing top-level names to src/AMPAL.egg-info/top_level.txt 2023-09-10T13:27:34,179 reading manifest file 'src/AMPAL.egg-info/SOURCES.txt' 2023-09-10T13:27:34,182 reading manifest template 'MANIFEST.in' 2023-09-10T13:27:34,183 warning: no files found matching 'LICENSE.txt' 2023-09-10T13:27:34,202 writing manifest file 'src/AMPAL.egg-info/SOURCES.txt' 2023-09-10T13:27:34,204 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'ampal.__pycache__' is absent from the `packages` configuration. 2023-09-10T13:27:34,204 !! 2023-09-10T13:27:34,205 ******************************************************************************** 2023-09-10T13:27:34,206 ############################ 2023-09-10T13:27:34,206 # Package would be ignored # 2023-09-10T13:27:34,207 ############################ 2023-09-10T13:27:34,207 Python recognizes 'ampal.__pycache__' as an importable package[^1], 2023-09-10T13:27:34,208 but it is absent from setuptools' `packages` configuration. 2023-09-10T13:27:34,209 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-10T13:27:34,209 package, please make sure that 'ampal.__pycache__' is explicitly added 2023-09-10T13:27:34,210 to the `packages` configuration field. 2023-09-10T13:27:34,211 Alternatively, you can also rely on setuptools' discovery methods 2023-09-10T13:27:34,211 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-10T13:27:34,212 instead of `find_packages(...)`/`find:`). 2023-09-10T13:27:34,213 You can read more about "package discovery" on setuptools documentation page: 2023-09-10T13:27:34,214 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-10T13:27:34,215 If you don't want 'ampal.__pycache__' to be distributed and are 2023-09-10T13:27:34,216 already explicitly excluding 'ampal.__pycache__' via 2023-09-10T13:27:34,216 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-10T13:27:34,217 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-10T13:27:34,217 combination with a more fine grained `package-data` configuration. 2023-09-10T13:27:34,218 You can read more about "package data files" on setuptools documentation page: 2023-09-10T13:27:34,219 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-10T13:27:34,221 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-10T13:27:34,222 even if it does not contain any `.py` files. 2023-09-10T13:27:34,222 On the other hand, currently there is no concept of package data 2023-09-10T13:27:34,223 directory, all directories are treated like packages. 2023-09-10T13:27:34,224 ******************************************************************************** 2023-09-10T13:27:34,225 !! 2023-09-10T13:27:34,226 check.warn(importable) 2023-09-10T13:27:34,226 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'ampal.datafiles' is absent from the `packages` configuration. 2023-09-10T13:27:34,227 !! 2023-09-10T13:27:34,228 ******************************************************************************** 2023-09-10T13:27:34,229 ############################ 2023-09-10T13:27:34,230 # Package would be ignored # 2023-09-10T13:27:34,230 ############################ 2023-09-10T13:27:34,231 Python recognizes 'ampal.datafiles' as an importable package[^1], 2023-09-10T13:27:34,231 but it is absent from setuptools' `packages` configuration. 2023-09-10T13:27:34,232 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-10T13:27:34,233 package, please make sure that 'ampal.datafiles' is explicitly added 2023-09-10T13:27:34,234 to the `packages` configuration field. 2023-09-10T13:27:34,235 Alternatively, you can also rely on setuptools' discovery methods 2023-09-10T13:27:34,235 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-10T13:27:34,236 instead of `find_packages(...)`/`find:`). 2023-09-10T13:27:34,237 You can read more about "package discovery" on setuptools documentation page: 2023-09-10T13:27:34,238 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-10T13:27:34,239 If you don't want 'ampal.datafiles' to be distributed and are 2023-09-10T13:27:34,240 already explicitly excluding 'ampal.datafiles' via 2023-09-10T13:27:34,241 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-10T13:27:34,243 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-10T13:27:34,246 combination with a more fine grained `package-data` configuration. 2023-09-10T13:27:34,256 You can read more about "package data files" on setuptools documentation page: 2023-09-10T13:27:34,266 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-10T13:27:34,268 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-10T13:27:34,268 even if it does not contain any `.py` files. 2023-09-10T13:27:34,269 On the other hand, currently there is no concept of package data 2023-09-10T13:27:34,270 directory, all directories are treated like packages. 2023-09-10T13:27:34,271 ******************************************************************************** 2023-09-10T13:27:34,272 !! 2023-09-10T13:27:34,273 check.warn(importable) 2023-09-10T13:27:34,274 copying src/ampal/.analyse_protein.py.swp -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T13:27:34,275 copying src/ampal/.base_ampal.py.swp -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T13:27:34,275 copying src/ampal/geometry.c -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T13:27:34,276 copying src/ampal/geometry.pyx -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T13:27:34,276 creating build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T13:27:34,277 copying src/ampal/__pycache__/__init__.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T13:27:34,278 copying src/ampal/__pycache__/amino_acids.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T13:27:34,282 copying src/ampal/__pycache__/ampal_warnings.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T13:27:34,284 copying src/ampal/__pycache__/analyse_protein.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T13:27:34,287 copying src/ampal/__pycache__/assembly.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T13:27:34,290 copying src/ampal/__pycache__/base_ampal.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T13:27:34,294 copying src/ampal/__pycache__/data.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T13:27:34,297 copying src/ampal/__pycache__/interactions.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T13:27:34,300 copying src/ampal/__pycache__/ligands.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T13:27:34,303 copying src/ampal/__pycache__/nucleic_acid.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T13:27:34,307 copying src/ampal/__pycache__/pdb_parser.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T13:27:34,311 copying src/ampal/__pycache__/protein.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T13:27:34,317 copying src/ampal/__pycache__/pseudo_atoms.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T13:27:34,321 creating build/lib.linux-armv7l-cpython-311/ampal/datafiles 2023-09-10T13:27:34,322 copying src/ampal/datafiles/amino_acids.json -> build/lib.linux-armv7l-cpython-311/ampal/datafiles 2023-09-10T13:27:34,326 copying src/ampal/datafiles/chemical_elements.json -> build/lib.linux-armv7l-cpython-311/ampal/datafiles 2023-09-10T13:27:34,329 copying src/ampal/datafiles/pdb_atom_column_format.json -> build/lib.linux-armv7l-cpython-311/ampal/datafiles 2023-09-10T13:27:34,334 running build_ext 2023-09-10T13:27:34,340 building 'ampal.geometry' extension 2023-09-10T13:27:34,341 creating build/temp.linux-armv7l-cpython-311 2023-09-10T13:27:34,342 creating build/temp.linux-armv7l-cpython-311/src 2023-09-10T13:27:34,342 creating build/temp.linux-armv7l-cpython-311/src/ampal 2023-09-10T13:27:34,343 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c src/ampal/geometry.c -o build/temp.linux-armv7l-cpython-311/src/ampal/geometry.o 2023-09-10T13:27:40,359 src/ampal/geometry.c:7286:18: warning: ‘__pyx_f_5ampal_8geometry__unit_vector’ defined but not used [-Wunused-function] 2023-09-10T13:27:40,359 7286 | static PyObject *__pyx_f_5ampal_8geometry__unit_vector(double *__pyx_v_a) { 2023-09-10T13:27:40,360 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-10T13:27:40,364 src/ampal/geometry.c:6356:15: warning: ‘__pyx_f_5ampal_8geometry__dot_product_2d’ defined but not used [-Wunused-function] 2023-09-10T13:27:40,365 6356 | static double __pyx_f_5ampal_8geometry__dot_product_2d(double *__pyx_v_a, double *__pyx_v_b) { 2023-09-10T13:27:40,366 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-10T13:29:07,372 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/ampal/geometry.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/ampal/geometry.cpython-311-arm-linux-gnueabihf.so 2023-09-10T13:29:07,595 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-09-10T13:29:07,595 !! 2023-09-10T13:29:07,597 ******************************************************************************** 2023-09-10T13:29:07,597 Please avoid running ``setup.py`` directly. 2023-09-10T13:29:07,598 Instead, use pypa/build, pypa/installer or other 2023-09-10T13:29:07,598 standards-based tools. 2023-09-10T13:29:07,600 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-09-10T13:29:07,600 ******************************************************************************** 2023-09-10T13:29:07,601 !! 2023-09-10T13:29:07,602 self.initialize_options() 2023-09-10T13:29:07,620 installing to build/bdist.linux-armv7l/wheel 2023-09-10T13:29:07,621 running install 2023-09-10T13:29:07,644 running install_lib 2023-09-10T13:29:07,668 creating build/bdist.linux-armv7l 2023-09-10T13:29:07,669 creating build/bdist.linux-armv7l/wheel 2023-09-10T13:29:07,670 creating build/bdist.linux-armv7l/wheel/ampal 2023-09-10T13:29:07,671 copying build/lib.linux-armv7l-cpython-311/ampal/.analyse_protein.py.swp -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T13:29:07,674 copying build/lib.linux-armv7l-cpython-311/ampal/assembly.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T13:29:07,676 copying build/lib.linux-armv7l-cpython-311/ampal/geometry.c -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T13:29:07,709 creating build/bdist.linux-armv7l/wheel/ampal/datafiles 2023-09-10T13:29:07,709 copying build/lib.linux-armv7l-cpython-311/ampal/datafiles/chemical_elements.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles 2023-09-10T13:29:07,713 copying build/lib.linux-armv7l-cpython-311/ampal/datafiles/amino_acids.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles 2023-09-10T13:29:07,716 copying build/lib.linux-armv7l-cpython-311/ampal/datafiles/pdb_atom_column_format.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles 2023-09-10T13:29:07,719 copying build/lib.linux-armv7l-cpython-311/ampal/geometry.pyx -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T13:29:07,722 copying build/lib.linux-armv7l-cpython-311/ampal/protein.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T13:29:07,725 copying build/lib.linux-armv7l-cpython-311/ampal/amino_acids.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T13:29:07,727 copying build/lib.linux-armv7l-cpython-311/ampal/analyse_protein.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T13:29:07,730 copying build/lib.linux-armv7l-cpython-311/ampal/data.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T13:29:07,731 copying build/lib.linux-armv7l-cpython-311/ampal/__init__.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T13:29:07,733 creating build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T13:29:07,734 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/protein.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T13:29:07,737 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/base_ampal.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T13:29:07,740 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/interactions.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T13:29:07,742 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/ligands.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T13:29:07,744 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/ampal_warnings.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T13:29:07,745 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/analyse_protein.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T13:29:07,748 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/pseudo_atoms.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T13:29:07,750 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/nucleic_acid.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T13:29:07,752 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/pdb_parser.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T13:29:07,755 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/data.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T13:29:07,756 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/assembly.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T13:29:07,759 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/amino_acids.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T13:29:07,761 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/__init__.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T13:29:07,762 copying build/lib.linux-armv7l-cpython-311/ampal/geometry.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T13:29:07,803 copying build/lib.linux-armv7l-cpython-311/ampal/.base_ampal.py.swp -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T13:29:07,805 copying build/lib.linux-armv7l-cpython-311/ampal/ligands.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T13:29:07,807 copying build/lib.linux-armv7l-cpython-311/ampal/nucleic_acid.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T13:29:07,809 copying build/lib.linux-armv7l-cpython-311/ampal/ampal_warnings.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T13:29:07,811 copying build/lib.linux-armv7l-cpython-311/ampal/base_ampal.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T13:29:07,813 copying build/lib.linux-armv7l-cpython-311/ampal/pdb_parser.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T13:29:07,815 copying build/lib.linux-armv7l-cpython-311/ampal/interactions.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T13:29:07,817 copying build/lib.linux-armv7l-cpython-311/ampal/pseudo_atoms.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T13:29:07,819 running install_egg_info 2023-09-10T13:29:07,850 Copying src/AMPAL.egg-info to build/bdist.linux-armv7l/wheel/AMPAL-1.0.1-py3.11.egg-info 2023-09-10T13:29:07,861 running install_scripts 2023-09-10T13:29:07,909 creating build/bdist.linux-armv7l/wheel/AMPAL-1.0.1.dist-info/WHEEL 2023-09-10T13:29:07,912 creating '/tmp/pip-wheel-di4h64k0/AMPAL-1.0.1-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-10T13:29:07,916 adding 'ampal/.analyse_protein.py.swp' 2023-09-10T13:29:07,920 adding 'ampal/.base_ampal.py.swp' 2023-09-10T13:29:07,921 adding 'ampal/__init__.py' 2023-09-10T13:29:07,924 adding 'ampal/amino_acids.py' 2023-09-10T13:29:07,925 adding 'ampal/ampal_warnings.py' 2023-09-10T13:29:07,928 adding 'ampal/analyse_protein.py' 2023-09-10T13:29:07,931 adding 'ampal/assembly.py' 2023-09-10T13:29:07,934 adding 'ampal/base_ampal.py' 2023-09-10T13:29:07,936 adding 'ampal/data.py' 2023-09-10T13:29:08,098 adding 'ampal/geometry.c' 2023-09-10T13:29:08,594 adding 'ampal/geometry.cpython-311-arm-linux-gnueabihf.so' 2023-09-10T13:29:08,621 adding 'ampal/geometry.pyx' 2023-09-10T13:29:08,623 adding 'ampal/interactions.py' 2023-09-10T13:29:08,624 adding 'ampal/ligands.py' 2023-09-10T13:29:08,625 adding 'ampal/nucleic_acid.py' 2023-09-10T13:29:08,628 adding 'ampal/pdb_parser.py' 2023-09-10T13:29:08,632 adding 'ampal/protein.py' 2023-09-10T13:29:08,634 adding 'ampal/pseudo_atoms.py' 2023-09-10T13:29:08,636 adding 'ampal/__pycache__/__init__.cpython-36.pyc' 2023-09-10T13:29:08,638 adding 'ampal/__pycache__/amino_acids.cpython-36.pyc' 2023-09-10T13:29:08,639 adding 'ampal/__pycache__/ampal_warnings.cpython-36.pyc' 2023-09-10T13:29:08,642 adding 'ampal/__pycache__/analyse_protein.cpython-36.pyc' 2023-09-10T13:29:08,646 adding 'ampal/__pycache__/assembly.cpython-36.pyc' 2023-09-10T13:29:08,650 adding 'ampal/__pycache__/base_ampal.cpython-36.pyc' 2023-09-10T13:29:08,651 adding 'ampal/__pycache__/data.cpython-36.pyc' 2023-09-10T13:29:08,653 adding 'ampal/__pycache__/interactions.cpython-36.pyc' 2023-09-10T13:29:08,655 adding 'ampal/__pycache__/ligands.cpython-36.pyc' 2023-09-10T13:29:08,656 adding 'ampal/__pycache__/nucleic_acid.cpython-36.pyc' 2023-09-10T13:29:08,659 adding 'ampal/__pycache__/pdb_parser.cpython-36.pyc' 2023-09-10T13:29:08,663 adding 'ampal/__pycache__/protein.cpython-36.pyc' 2023-09-10T13:29:08,666 adding 'ampal/__pycache__/pseudo_atoms.cpython-36.pyc' 2023-09-10T13:29:08,673 adding 'ampal/datafiles/amino_acids.json' 2023-09-10T13:29:08,678 adding 'ampal/datafiles/chemical_elements.json' 2023-09-10T13:29:08,695 adding 'ampal/datafiles/pdb_atom_column_format.json' 2023-09-10T13:29:08,697 adding 'AMPAL-1.0.1.dist-info/METADATA' 2023-09-10T13:29:08,698 adding 'AMPAL-1.0.1.dist-info/WHEEL' 2023-09-10T13:29:08,699 adding 'AMPAL-1.0.1.dist-info/top_level.txt' 2023-09-10T13:29:08,700 adding 'AMPAL-1.0.1.dist-info/RECORD' 2023-09-10T13:29:08,716 removing build/bdist.linux-armv7l/wheel 2023-09-10T13:29:08,872 Building wheel for ampal (setup.py): finished with status 'done' 2023-09-10T13:29:08,892 Created wheel for ampal: filename=AMPAL-1.0.1-cp311-cp311-linux_armv7l.whl size=1417433 sha256=d691092eb5181b42c73d036ded2f8a1f02b8674d5cb9af3213dd1ac48d4bb5bb 2023-09-10T13:29:08,894 Stored in directory: /tmp/pip-ephem-wheel-cache-ph74ke6m/wheels/ea/19/f5/39ee1948f06bdf01af85b86394fea754a68e9d9736fa045476 2023-09-10T13:29:08,905 Successfully built ampal 2023-09-10T13:29:08,939 Removed build tracker: '/tmp/pip-build-tracker-vxb_4dwa'