2023-09-10T13:30:00,358 Created temporary directory: /tmp/pip-build-tracker-y6uqt904
2023-09-10T13:30:00,359 Initialized build tracking at /tmp/pip-build-tracker-y6uqt904
2023-09-10T13:30:00,359 Created build tracker: /tmp/pip-build-tracker-y6uqt904
2023-09-10T13:30:00,360 Entered build tracker: /tmp/pip-build-tracker-y6uqt904
2023-09-10T13:30:00,360 Created temporary directory: /tmp/pip-wheel-qbpjgo53
2023-09-10T13:30:00,364 Created temporary directory: /tmp/pip-ephem-wheel-cache-b2qamjga
2023-09-10T13:30:00,388 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-10T13:30:00,392 2 location(s) to search for versions of icgc-data-parser:
2023-09-10T13:30:00,392 * https://pypi.org/simple/icgc-data-parser/
2023-09-10T13:30:00,392 * https://www.piwheels.org/simple/icgc-data-parser/
2023-09-10T13:30:00,392 Fetching project page and analyzing links: https://pypi.org/simple/icgc-data-parser/
2023-09-10T13:30:00,393 Getting page https://pypi.org/simple/icgc-data-parser/
2023-09-10T13:30:00,395 Found index url https://pypi.org/simple/
2023-09-10T13:30:00,628 Fetched page https://pypi.org/simple/icgc-data-parser/ as application/vnd.pypi.simple.v1+json
2023-09-10T13:30:00,630   Found link https://files.pythonhosted.org/packages/66/4e/ac497d6fafbbdb3afd8a34f5b14fa5baf887bab7b03b11d1b37415f1b908/ICGC-data-parser-0.1.0.tar.gz (from https://pypi.org/simple/icgc-data-parser/), version: 0.1.0
2023-09-10T13:30:00,630   Found link https://files.pythonhosted.org/packages/31/96/1de7dacf24f68076f5fba1966b0d61d7f0245efd582dbbff52eda8943ca4/ICGC-data-parser-0.1.1.tar.gz (from https://pypi.org/simple/icgc-data-parser/), version: 0.1.1
2023-09-10T13:30:00,631   Skipping link: No binaries permitted for icgc-data-parser: https://files.pythonhosted.org/packages/0c/10/cb015ffdccd4da66f61279aff6e17109defd2e8fb6bf54bab1129fdd43e8/ICGC_data_parser-0.2.0-py3-none-any.whl (from https://pypi.org/simple/icgc-data-parser/)
2023-09-10T13:30:00,632   Skipping link: No binaries permitted for icgc-data-parser: https://files.pythonhosted.org/packages/ed/96/b90b0b8a28680faf9b16b837f1445c2437d06a5e53dd357f0434c30b628b/ICGC_data_parser-0.2.1-py3-none-any.whl (from https://pypi.org/simple/icgc-data-parser/)
2023-09-10T13:30:00,632   Skipping link: No binaries permitted for icgc-data-parser: https://files.pythonhosted.org/packages/94/97/8169f98b0f61e40809dc519893831d37772d313a598f137bee8328dce869/ICGC_data_parser-0.2.2-py3-none-any.whl (from https://pypi.org/simple/icgc-data-parser/)
2023-09-10T13:30:00,633 Fetching project page and analyzing links: https://www.piwheels.org/simple/icgc-data-parser/
2023-09-10T13:30:00,634 Getting page https://www.piwheels.org/simple/icgc-data-parser/
2023-09-10T13:30:00,635 Found index url https://www.piwheels.org/simple/
2023-09-10T13:30:03,742 Fetched page https://www.piwheels.org/simple/icgc-data-parser/ as text/html
2023-09-10T13:30:03,744 Skipping link: not a file: https://www.piwheels.org/simple/icgc-data-parser/
2023-09-10T13:30:03,745 Skipping link: not a file: https://pypi.org/simple/icgc-data-parser/
2023-09-10T13:30:03,783 Given no hashes to check 1 links for project 'icgc-data-parser': discarding no candidates
2023-09-10T13:30:03,810 Collecting icgc-data-parser==0.1.1
2023-09-10T13:30:03,812   Created temporary directory: /tmp/pip-unpack-jdo1x20y
2023-09-10T13:30:04,143   Downloading ICGC-data-parser-0.1.1.tar.gz (259 kB)
2023-09-10T13:30:04,291   Added icgc-data-parser==0.1.1 from https://files.pythonhosted.org/packages/31/96/1de7dacf24f68076f5fba1966b0d61d7f0245efd582dbbff52eda8943ca4/ICGC-data-parser-0.1.1.tar.gz to build tracker '/tmp/pip-build-tracker-y6uqt904'
2023-09-10T13:30:04,293   Running setup.py (path:/tmp/pip-wheel-qbpjgo53/icgc-data-parser_5569c24df57642dca03a1bcd6f6c0a7a/setup.py) egg_info for package icgc-data-parser
2023-09-10T13:30:04,294   Created temporary directory: /tmp/pip-pip-egg-info-wm48lnty
2023-09-10T13:30:04,295   Preparing metadata (setup.py): started
2023-09-10T13:30:04,296   Running command python setup.py egg_info
2023-09-10T13:30:04,745   Traceback (most recent call last):
2023-09-10T13:30:04,745     File "<string>", line 2, in <module>
2023-09-10T13:30:04,747     File "<pip-setuptools-caller>", line 34, in <module>
2023-09-10T13:30:04,747     File "/tmp/pip-wheel-qbpjgo53/icgc-data-parser_5569c24df57642dca03a1bcd6f6c0a7a/setup.py", line 17, in <module>
2023-09-10T13:30:04,748       with open(path.join(here, 'src/Python/README.rst'), encoding='utf-8') as f:
2023-09-10T13:30:04,749            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T13:30:04,750     File "<frozen codecs>", line 906, in open
2023-09-10T13:30:04,750   FileNotFoundError: [Errno 2] No such file or directory: '/tmp/pip-wheel-qbpjgo53/icgc-data-parser_5569c24df57642dca03a1bcd6f6c0a7a/src/Python/README.rst'
2023-09-10T13:30:04,814   ERROR: [present-rich] python setup.py egg_info exited with 1
2023-09-10T13:30:04,827   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2023-09-10T13:30:04,827   exec(compile('"'"''"'"''"'"'
2023-09-10T13:30:04,827   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-10T13:30:04,827   #
2023-09-10T13:30:04,827   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-10T13:30:04,827   #   import from `distutils.core` to work with newer packaging standards.
2023-09-10T13:30:04,827   # - It provides a clear error message when setuptools is not installed.
2023-09-10T13:30:04,827   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-10T13:30:04,827   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-10T13:30:04,827   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-10T13:30:04,827   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-10T13:30:04,827   import os, sys, tokenize
2023-09-10T13:30:04,827   
2023-09-10T13:30:04,827   try:
2023-09-10T13:30:04,827       import setuptools
2023-09-10T13:30:04,827   except ImportError as error:
2023-09-10T13:30:04,827       print(
2023-09-10T13:30:04,827           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-10T13:30:04,827           "the build environment.",
2023-09-10T13:30:04,827           file=sys.stderr,
2023-09-10T13:30:04,827       )
2023-09-10T13:30:04,827       sys.exit(1)
2023-09-10T13:30:04,827   
2023-09-10T13:30:04,827   __file__ = %r
2023-09-10T13:30:04,827   sys.argv[0] = __file__
2023-09-10T13:30:04,827   
2023-09-10T13:30:04,827   if os.path.exists(__file__):
2023-09-10T13:30:04,827       filename = __file__
2023-09-10T13:30:04,827       with tokenize.open(__file__) as f:
2023-09-10T13:30:04,827           setup_py_code = f.read()
2023-09-10T13:30:04,827   else:
2023-09-10T13:30:04,827       filename = "<auto-generated setuptools caller>"
2023-09-10T13:30:04,827       setup_py_code = "from setuptools import setup; setup()"
2023-09-10T13:30:04,827   
2023-09-10T13:30:04,827   exec(compile(setup_py_code, filename, "exec"))
2023-09-10T13:30:04,827   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-qbpjgo53/icgc-data-parser_5569c24df57642dca03a1bcd6f6c0a7a/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-wm48lnty[/]
2023-09-10T13:30:04,828   [bold magenta]cwd[/]: /tmp/pip-wheel-qbpjgo53/icgc-data-parser_5569c24df57642dca03a1bcd6f6c0a7a/
2023-09-10T13:30:04,828   Preparing metadata (setup.py): finished with status 'error'
2023-09-10T13:30:04,830 ERROR: [present-rich] metadata generation failed
2023-09-10T13:30:04,835 Exception information:
2023-09-10T13:30:04,835 Traceback (most recent call last):
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2023-09-10T13:30:04,835     call_subprocess(
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2023-09-10T13:30:04,835     raise error
2023-09-10T13:30:04,835 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2023-09-10T13:30:04,835 
2023-09-10T13:30:04,835 The above exception was the direct cause of the following exception:
2023-09-10T13:30:04,835 
2023-09-10T13:30:04,835 Traceback (most recent call last):
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-10T13:30:04,835     status = run_func(*args)
2023-09-10T13:30:04,835              ^^^^^^^^^^^^^^^
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-10T13:30:04,835     return func(self, options, args)
2023-09-10T13:30:04,835            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2023-09-10T13:30:04,835     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2023-09-10T13:30:04,835                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve
2023-09-10T13:30:04,835     result = self._result = resolver.resolve(
2023-09-10T13:30:04,835                             ^^^^^^^^^^^^^^^^^
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2023-09-10T13:30:04,835     state = resolution.resolve(requirements, max_rounds=max_rounds)
2023-09-10T13:30:04,835             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2023-09-10T13:30:04,835     self._add_to_criteria(self.state.criteria, r, parent=None)
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2023-09-10T13:30:04,835     if not criterion.candidates:
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2023-09-10T13:30:04,835     return bool(self._sequence)
2023-09-10T13:30:04,835            ^^^^^^^^^^^^^^^^^^^^
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2023-09-10T13:30:04,835     return any(self)
2023-09-10T13:30:04,835            ^^^^^^^^^
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2023-09-10T13:30:04,835     return (c for c in iterator if id(c) not in self._incompatible_ids)
2023-09-10T13:30:04,835            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2023-09-10T13:30:04,835     candidate = func()
2023-09-10T13:30:04,835                 ^^^^^^
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link
2023-09-10T13:30:04,835     self._link_candidate_cache[link] = LinkCandidate(
2023-09-10T13:30:04,835                                        ^^^^^^^^^^^^^^
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__
2023-09-10T13:30:04,835     super().__init__(
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
2023-09-10T13:30:04,835     self.dist = self._prepare()
2023-09-10T13:30:04,835                 ^^^^^^^^^^^^^^^
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare
2023-09-10T13:30:04,835     dist = self._prepare_distribution()
2023-09-10T13:30:04,835            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution
2023-09-10T13:30:04,835     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2023-09-10T13:30:04,835            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement
2023-09-10T13:30:04,835     return self._prepare_linked_requirement(req, parallel_builds)
2023-09-10T13:30:04,835            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement
2023-09-10T13:30:04,835     dist = _get_prepared_distribution(
2023-09-10T13:30:04,835            ^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution
2023-09-10T13:30:04,835     abstract_dist.prepare_distribution_metadata(
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata
2023-09-10T13:30:04,835     self.req.prepare_metadata()
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata
2023-09-10T13:30:04,835     self.metadata_directory = generate_metadata_legacy(
2023-09-10T13:30:04,835                               ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T13:30:04,835   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2023-09-10T13:30:04,835     raise MetadataGenerationFailed(package_details=details) from error
2023-09-10T13:30:04,835 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2023-09-10T13:30:04,848 Removed icgc-data-parser==0.1.1 from https://files.pythonhosted.org/packages/31/96/1de7dacf24f68076f5fba1966b0d61d7f0245efd582dbbff52eda8943ca4/ICGC-data-parser-0.1.1.tar.gz from build tracker '/tmp/pip-build-tracker-y6uqt904'
2023-09-10T13:30:04,849 Removed build tracker: '/tmp/pip-build-tracker-y6uqt904'