2023-09-10T14:01:32,258 Created temporary directory: /tmp/pip-build-tracker-u76imga2
2023-09-10T14:01:32,259 Initialized build tracking at /tmp/pip-build-tracker-u76imga2
2023-09-10T14:01:32,260 Created build tracker: /tmp/pip-build-tracker-u76imga2
2023-09-10T14:01:32,260 Entered build tracker: /tmp/pip-build-tracker-u76imga2
2023-09-10T14:01:32,261 Created temporary directory: /tmp/pip-wheel-utdmt0o4
2023-09-10T14:01:32,264 Created temporary directory: /tmp/pip-ephem-wheel-cache-_tbp1qkq
2023-09-10T14:01:32,285 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-10T14:01:32,289 2 location(s) to search for versions of hatshufflepy:
2023-09-10T14:01:32,289 * https://pypi.org/simple/hatshufflepy/
2023-09-10T14:01:32,289 * https://www.piwheels.org/simple/hatshufflepy/
2023-09-10T14:01:32,290 Fetching project page and analyzing links: https://pypi.org/simple/hatshufflepy/
2023-09-10T14:01:32,290 Getting page https://pypi.org/simple/hatshufflepy/
2023-09-10T14:01:32,292 Found index url https://pypi.org/simple/
2023-09-10T14:01:32,541 Fetched page https://pypi.org/simple/hatshufflepy/ as application/vnd.pypi.simple.v1+json
2023-09-10T14:01:32,543   Found link https://files.pythonhosted.org/packages/2f/55/14d78ef177d725c0ddec3583bd5b9383440e399fa94e00aab8e519a0f850/hatshufflepy-0.0.1.tar.gz (from https://pypi.org/simple/hatshufflepy/), version: 0.0.1
2023-09-10T14:01:32,544   Found link https://files.pythonhosted.org/packages/65/e3/88ea19e93c06bd31230b273b46bad89c3fd39f5a25edc5485a2e8bc47802/hatshufflepy-0.0.2.tar.gz (from https://pypi.org/simple/hatshufflepy/), version: 0.0.2
2023-09-10T14:01:32,544   Found link https://files.pythonhosted.org/packages/27/6f/232dfb1720bec6a4327b3ea607eb148fb7e9c056d76c550993415d21c87a/hatshufflepy-0.0.3.tar.gz (from https://pypi.org/simple/hatshufflepy/), version: 0.0.3
2023-09-10T14:01:32,545   Found link https://files.pythonhosted.org/packages/31/bc/f2a7c97edee256489b4f10461688486d5f811a94a2ab1b6489f3ae7b624b/hatshufflepy-0.0.4.tar.gz (from https://pypi.org/simple/hatshufflepy/), version: 0.0.4
2023-09-10T14:01:32,546   Found link https://files.pythonhosted.org/packages/a9/0b/42071a0bef328b560c14eb80ce532ecd63a4178f6f3bec4b5c04eae9af8e/hatshufflepy-0.0.5.tar.gz (from https://pypi.org/simple/hatshufflepy/), version: 0.0.5
2023-09-10T14:01:32,546   Found link https://files.pythonhosted.org/packages/c3/5b/2bc2424b1b81c13141bacaff629c9be11a9442d165feb7b91312b16f991e/hatshufflepy-0.0.6.tar.gz (from https://pypi.org/simple/hatshufflepy/), version: 0.0.6
2023-09-10T14:01:32,547 Fetching project page and analyzing links: https://www.piwheels.org/simple/hatshufflepy/
2023-09-10T14:01:32,548 Getting page https://www.piwheels.org/simple/hatshufflepy/
2023-09-10T14:01:32,549 Found index url https://www.piwheels.org/simple/
2023-09-10T14:01:40,289 Fetched page https://www.piwheels.org/simple/hatshufflepy/ as text/html
2023-09-10T14:01:40,291 Skipping link: not a file: https://www.piwheels.org/simple/hatshufflepy/
2023-09-10T14:01:40,292 Skipping link: not a file: https://pypi.org/simple/hatshufflepy/
2023-09-10T14:01:40,326 Given no hashes to check 1 links for project 'hatshufflepy': discarding no candidates
2023-09-10T14:01:40,355 Collecting hatshufflepy==0.0.1
2023-09-10T14:01:40,359   Created temporary directory: /tmp/pip-unpack-j1mdvhoc
2023-09-10T14:01:40,613   Downloading hatshufflepy-0.0.1.tar.gz (4.7 MB)
2023-09-10T14:01:42,253   Added hatshufflepy==0.0.1 from https://files.pythonhosted.org/packages/2f/55/14d78ef177d725c0ddec3583bd5b9383440e399fa94e00aab8e519a0f850/hatshufflepy-0.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-u76imga2'
2023-09-10T14:01:42,254   Running setup.py (path:/tmp/pip-wheel-utdmt0o4/hatshufflepy_a481703d2ae447f3ae154a0a8baa7628/setup.py) egg_info for package hatshufflepy
2023-09-10T14:01:42,255   Created temporary directory: /tmp/pip-pip-egg-info-p4t2chx_
2023-09-10T14:01:42,256   Preparing metadata (setup.py): started
2023-09-10T14:01:42,257   Running command python setup.py egg_info
2023-09-10T14:01:44,625   /usr/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-utdmt0o4/hatshufflepy_a481703d2ae447f3ae154a0a8baa7628/hatshufflepy/hatshufflepy.pxd
2023-09-10T14:01:44,625     tree = Parsing.p_module(s, pxd, full_module_name)
2023-09-10T14:01:45,177   Compiling hatshufflepy/hatshufflepy.pyx because it changed.
2023-09-10T14:01:45,178   [1/1] Cythonizing hatshufflepy/hatshufflepy.pyx
2023-09-10T14:01:45,222   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-10T14:01:45,222   !!

2023-09-10T14:01:45,224           ********************************************************************************
2023-09-10T14:01:45,224           Usage of dash-separated 'description-file' will not be supported in future
2023-09-10T14:01:45,225           versions. Please use the underscore name 'description_file' instead.

2023-09-10T14:01:45,226           By 2023-Sep-26, you need to update your project and remove deprecated calls
2023-09-10T14:01:45,226           or your builds will no longer be supported.

2023-09-10T14:01:45,227           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-10T14:01:45,228           ********************************************************************************

2023-09-10T14:01:45,229   !!
2023-09-10T14:01:45,230     opt = self.warn_dash_deprecation(opt, section)
2023-09-10T14:01:45,730   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-10T14:01:45,730   !!

2023-09-10T14:01:45,732           ********************************************************************************
2023-09-10T14:01:45,733           Usage of dash-separated 'description-file' will not be supported in future
2023-09-10T14:01:45,733           versions. Please use the underscore name 'description_file' instead.

2023-09-10T14:01:45,735           By 2023-Sep-26, you need to update your project and remove deprecated calls
2023-09-10T14:01:45,735           or your builds will no longer be supported.

2023-09-10T14:01:45,737           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-10T14:01:45,737           ********************************************************************************

2023-09-10T14:01:45,744   !!
2023-09-10T14:01:45,745     opt = self.warn_dash_deprecation(opt, section)
2023-09-10T14:01:45,779   running egg_info
2023-09-10T14:01:45,780   creating /tmp/pip-pip-egg-info-p4t2chx_/hatshufflepy.egg-info
2023-09-10T14:01:45,814   writing /tmp/pip-pip-egg-info-p4t2chx_/hatshufflepy.egg-info/PKG-INFO
2023-09-10T14:01:45,823   writing dependency_links to /tmp/pip-pip-egg-info-p4t2chx_/hatshufflepy.egg-info/dependency_links.txt
2023-09-10T14:01:45,826   writing requirements to /tmp/pip-pip-egg-info-p4t2chx_/hatshufflepy.egg-info/requires.txt
2023-09-10T14:01:45,828   writing top-level names to /tmp/pip-pip-egg-info-p4t2chx_/hatshufflepy.egg-info/top_level.txt
2023-09-10T14:01:45,830   writing manifest file '/tmp/pip-pip-egg-info-p4t2chx_/hatshufflepy.egg-info/SOURCES.txt'
2023-09-10T14:01:45,906   reading manifest file '/tmp/pip-pip-egg-info-p4t2chx_/hatshufflepy.egg-info/SOURCES.txt'
2023-09-10T14:01:45,909   reading manifest template 'MANIFEST.in'
2023-09-10T14:01:45,999   writing manifest file '/tmp/pip-pip-egg-info-p4t2chx_/hatshufflepy.egg-info/SOURCES.txt'
2023-09-10T14:01:46,255   Preparing metadata (setup.py): finished with status 'done'
2023-09-10T14:01:46,260   Source in /tmp/pip-wheel-utdmt0o4/hatshufflepy_a481703d2ae447f3ae154a0a8baa7628 has version 0.0.1, which satisfies requirement hatshufflepy==0.0.1 from https://files.pythonhosted.org/packages/2f/55/14d78ef177d725c0ddec3583bd5b9383440e399fa94e00aab8e519a0f850/hatshufflepy-0.0.1.tar.gz
2023-09-10T14:01:46,261   Removed hatshufflepy==0.0.1 from https://files.pythonhosted.org/packages/2f/55/14d78ef177d725c0ddec3583bd5b9383440e399fa94e00aab8e519a0f850/hatshufflepy-0.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-u76imga2'
2023-09-10T14:01:46,266 Created temporary directory: /tmp/pip-unpack-aqmxjjwj
2023-09-10T14:01:46,268 Created temporary directory: /tmp/pip-unpack-5rll4y6a
2023-09-10T14:01:46,272 Building wheels for collected packages: hatshufflepy
2023-09-10T14:01:46,278   Created temporary directory: /tmp/pip-wheel-6bhcxump
2023-09-10T14:01:46,279   Building wheel for hatshufflepy (setup.py): started
2023-09-10T14:01:46,280   Destination directory: /tmp/pip-wheel-6bhcxump
2023-09-10T14:01:46,281   Running command python setup.py bdist_wheel
2023-09-10T14:01:47,406   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-10T14:01:47,406   !!

2023-09-10T14:01:47,407           ********************************************************************************
2023-09-10T14:01:47,407           Usage of dash-separated 'description-file' will not be supported in future
2023-09-10T14:01:47,408           versions. Please use the underscore name 'description_file' instead.

2023-09-10T14:01:47,409           By 2023-Sep-26, you need to update your project and remove deprecated calls
2023-09-10T14:01:47,409           or your builds will no longer be supported.

2023-09-10T14:01:47,410           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-10T14:01:47,411           ********************************************************************************

2023-09-10T14:01:47,412   !!
2023-09-10T14:01:47,412     opt = self.warn_dash_deprecation(opt, section)
2023-09-10T14:01:47,769   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-10T14:01:47,770   !!

2023-09-10T14:01:47,771           ********************************************************************************
2023-09-10T14:01:47,771           Usage of dash-separated 'description-file' will not be supported in future
2023-09-10T14:01:47,772           versions. Please use the underscore name 'description_file' instead.

2023-09-10T14:01:47,773           By 2023-Sep-26, you need to update your project and remove deprecated calls
2023-09-10T14:01:47,774           or your builds will no longer be supported.

2023-09-10T14:01:47,775           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-10T14:01:47,776           ********************************************************************************

2023-09-10T14:01:47,777   !!
2023-09-10T14:01:47,777     opt = self.warn_dash_deprecation(opt, section)
2023-09-10T14:01:47,802   running bdist_wheel
2023-09-10T14:01:47,875   running build
2023-09-10T14:01:47,876   running build_ext
2023-09-10T14:01:47,882   building 'hatshufflepy' extension
2023-09-10T14:01:47,883   creating build
2023-09-10T14:01:47,883   creating build/temp.linux-armv7l-cpython-311
2023-09-10T14:01:47,884   creating build/temp.linux-armv7l-cpython-311/hatshufflepy
2023-09-10T14:01:47,885   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ihatshufflepy/libhatshuffle/include/libhatshuffle -Ihatshufflepy/libhatshuffle/include -Ilibhatshuffle/include/libff -I/usr/include/python3.11 -c hatshufflepy/hatshufflepy.cpp -o build/temp.linux-armv7l-cpython-311/hatshufflepy/hatshufflepy.o -std=c++11 -fPIC -shared -w -static -O3
2023-09-10T14:02:03,126   creating build/lib.linux-armv7l-cpython-311
2023-09-10T14:02:03,126   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/hatshufflepy/hatshufflepy.o -L/usr/local/lib -Lhatshufflepy/libhatshuffle/lib -L/usr/lib/arm-linux-gnueabihf -Wl,--enable-new-dtags,-R/tmp/pip-wheel-utdmt0o4/hatshufflepy_a481703d2ae447f3ae154a0a8baa7628/hatshufflepy/libhatshuffle/lib -Wl,--enable-new-dtags,-R./ -lzm -lff -lhatshuffle -o build/lib.linux-armv7l-cpython-311/hatshufflepy.cpython-311-arm-linux-gnueabihf.so -lgmp -fopenmp -g
2023-09-10T14:02:03,153   hatshufflepy/libhatshuffle/lib/libzm.so: file not recognized: file format not recognized
2023-09-10T14:02:03,154   collect2: error: ld returned 1 exit status
2023-09-10T14:02:03,156   error: command '/usr/bin/arm-linux-gnueabihf-g++' failed with exit code 1
2023-09-10T14:02:03,304   ERROR: [present-rich] python setup.py bdist_wheel exited with 1
2023-09-10T14:02:03,317   [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c '
2023-09-10T14:02:03,317   exec(compile('"'"''"'"''"'"'
2023-09-10T14:02:03,317   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-10T14:02:03,317   #
2023-09-10T14:02:03,317   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-10T14:02:03,317   #   import from `distutils.core` to work with newer packaging standards.
2023-09-10T14:02:03,317   # - It provides a clear error message when setuptools is not installed.
2023-09-10T14:02:03,317   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-10T14:02:03,317   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-10T14:02:03,317   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-10T14:02:03,317   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-10T14:02:03,317   import os, sys, tokenize
2023-09-10T14:02:03,317   
2023-09-10T14:02:03,317   try:
2023-09-10T14:02:03,317       import setuptools
2023-09-10T14:02:03,317   except ImportError as error:
2023-09-10T14:02:03,317       print(
2023-09-10T14:02:03,317           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-10T14:02:03,317           "the build environment.",
2023-09-10T14:02:03,317           file=sys.stderr,
2023-09-10T14:02:03,317       )
2023-09-10T14:02:03,317       sys.exit(1)
2023-09-10T14:02:03,317   
2023-09-10T14:02:03,317   __file__ = %r
2023-09-10T14:02:03,317   sys.argv[0] = __file__
2023-09-10T14:02:03,317   
2023-09-10T14:02:03,317   if os.path.exists(__file__):
2023-09-10T14:02:03,317       filename = __file__
2023-09-10T14:02:03,317       with tokenize.open(__file__) as f:
2023-09-10T14:02:03,317           setup_py_code = f.read()
2023-09-10T14:02:03,317   else:
2023-09-10T14:02:03,317       filename = "<auto-generated setuptools caller>"
2023-09-10T14:02:03,317       setup_py_code = "from setuptools import setup; setup()"
2023-09-10T14:02:03,317   
2023-09-10T14:02:03,317   exec(compile(setup_py_code, filename, "exec"))
2023-09-10T14:02:03,317   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-utdmt0o4/hatshufflepy_a481703d2ae447f3ae154a0a8baa7628/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' bdist_wheel -d /tmp/pip-wheel-6bhcxump[/]
2023-09-10T14:02:03,318   [bold magenta]cwd[/]: /tmp/pip-wheel-utdmt0o4/hatshufflepy_a481703d2ae447f3ae154a0a8baa7628/
2023-09-10T14:02:03,318   Building wheel for hatshufflepy (setup.py): finished with status 'error'
2023-09-10T14:02:03,319   ERROR: Failed building wheel for hatshufflepy
2023-09-10T14:02:03,321   Running setup.py clean for hatshufflepy
2023-09-10T14:02:03,322   Running command python setup.py clean
2023-09-10T14:02:04,441   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-10T14:02:04,442   !!

2023-09-10T14:02:04,443           ********************************************************************************
2023-09-10T14:02:04,443           Usage of dash-separated 'description-file' will not be supported in future
2023-09-10T14:02:04,444           versions. Please use the underscore name 'description_file' instead.

2023-09-10T14:02:04,445           By 2023-Sep-26, you need to update your project and remove deprecated calls
2023-09-10T14:02:04,446           or your builds will no longer be supported.

2023-09-10T14:02:04,447           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-10T14:02:04,448           ********************************************************************************

2023-09-10T14:02:04,449   !!
2023-09-10T14:02:04,449     opt = self.warn_dash_deprecation(opt, section)
2023-09-10T14:02:04,809   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-10T14:02:04,810   !!

2023-09-10T14:02:04,811           ********************************************************************************
2023-09-10T14:02:04,811           Usage of dash-separated 'description-file' will not be supported in future
2023-09-10T14:02:04,812           versions. Please use the underscore name 'description_file' instead.

2023-09-10T14:02:04,813           By 2023-Sep-26, you need to update your project and remove deprecated calls
2023-09-10T14:02:04,813           or your builds will no longer be supported.

2023-09-10T14:02:04,814           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-10T14:02:04,815           ********************************************************************************

2023-09-10T14:02:04,815   !!
2023-09-10T14:02:04,816     opt = self.warn_dash_deprecation(opt, section)
2023-09-10T14:02:04,842   running clean
2023-09-10T14:02:04,891   removing 'build/temp.linux-armv7l-cpython-311' (and everything under it)
2023-09-10T14:02:04,893   removing 'build/lib.linux-armv7l-cpython-311' (and everything under it)
2023-09-10T14:02:04,894   'build/bdist.linux-armv7l' does not exist -- can't clean it
2023-09-10T14:02:04,894   'build/scripts-3.11' does not exist -- can't clean it
2023-09-10T14:02:04,895   removing 'build'
2023-09-10T14:02:05,044 Failed to build hatshufflepy
2023-09-10T14:02:05,045 ERROR: Failed to build one or more wheels
2023-09-10T14:02:05,046 Exception information:
2023-09-10T14:02:05,046 Traceback (most recent call last):
2023-09-10T14:02:05,046   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-10T14:02:05,046     status = run_func(*args)
2023-09-10T14:02:05,046              ^^^^^^^^^^^^^^^
2023-09-10T14:02:05,046   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-10T14:02:05,046     return func(self, options, args)
2023-09-10T14:02:05,046            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T14:02:05,046   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 181, in run
2023-09-10T14:02:05,046     raise CommandError("Failed to build one or more wheels")
2023-09-10T14:02:05,046 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2023-09-10T14:02:05,050 Removed build tracker: '/tmp/pip-build-tracker-u76imga2'