2023-09-10T15:13:03,196 Created temporary directory: /tmp/pip-build-tracker-86stuu5q 2023-09-10T15:13:03,197 Initialized build tracking at /tmp/pip-build-tracker-86stuu5q 2023-09-10T15:13:03,198 Created build tracker: /tmp/pip-build-tracker-86stuu5q 2023-09-10T15:13:03,198 Entered build tracker: /tmp/pip-build-tracker-86stuu5q 2023-09-10T15:13:03,199 Created temporary directory: /tmp/pip-wheel-9x89fjie 2023-09-10T15:13:03,202 Created temporary directory: /tmp/pip-ephem-wheel-cache-8faztw64 2023-09-10T15:13:03,224 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-10T15:13:03,227 2 location(s) to search for versions of ampal: 2023-09-10T15:13:03,227 * https://pypi.org/simple/ampal/ 2023-09-10T15:13:03,227 * https://www.piwheels.org/simple/ampal/ 2023-09-10T15:13:03,228 Fetching project page and analyzing links: https://pypi.org/simple/ampal/ 2023-09-10T15:13:03,229 Getting page https://pypi.org/simple/ampal/ 2023-09-10T15:13:03,230 Found index url https://pypi.org/simple/ 2023-09-10T15:13:03,371 Fetched page https://pypi.org/simple/ampal/ as application/vnd.pypi.simple.v1+json 2023-09-10T15:13:03,373 Found link https://files.pythonhosted.org/packages/3f/e5/03da3a77bba138c165451d3f8efb7fd32818aea4a6212b420c558e9088d8/AMPAL-1.0.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.0.0 2023-09-10T15:13:03,373 Found link https://files.pythonhosted.org/packages/c2/90/2aecb8bdeab8de4f896f38fc792b434292f0f96a86cd3b860c849f4cfd55/AMPAL-1.0.1.tar.gz (from https://pypi.org/simple/ampal/), version: 1.0.1 2023-09-10T15:13:03,374 Found link https://files.pythonhosted.org/packages/29/39/ac32680ba515731a81942c3a1bb8d0731fc0da02185885794ccf51dd604b/AMPAL-1.1.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.1.0 2023-09-10T15:13:03,375 Found link https://files.pythonhosted.org/packages/f4/11/85ef80392ed433f9024abc0bacc2173dd88ce0e7c42f23b804cc3650b1e5/AMPAL-1.2.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.2.0 2023-09-10T15:13:03,375 Found link https://files.pythonhosted.org/packages/a4/9a/940d9cd5af9177e35487a99bf8bf0ae4c80b28eeca70c266ebc2f341cd4d/AMPAL-1.3.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.3.0 2023-09-10T15:13:03,376 Found link https://files.pythonhosted.org/packages/c9/14/728e14ff9e6c3372082ffc88a2f78016b05143f0d6bee5c432c002314169/AMPAL-1.4.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.4.0 2023-09-10T15:13:03,377 Fetching project page and analyzing links: https://www.piwheels.org/simple/ampal/ 2023-09-10T15:13:03,377 Getting page https://www.piwheels.org/simple/ampal/ 2023-09-10T15:13:03,379 Found index url https://www.piwheels.org/simple/ 2023-09-10T15:13:05,047 Fetched page https://www.piwheels.org/simple/ampal/ as text/html 2023-09-10T15:13:05,071 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp39-cp39-linux_armv7l.whl#sha256=cf12ec38c08489ab3442a6bfb22e51ec2ce71637c16664f56a6bbc9b29d183b1 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,072 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp39-cp39-linux_armv6l.whl#sha256=cf12ec38c08489ab3442a6bfb22e51ec2ce71637c16664f56a6bbc9b29d183b1 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,073 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp35-cp35m-linux_armv6l.whl#sha256=bc4d3ad7d35fa4d09f2e20958dfb1a3f76fd710a23c6c78f6b8c3be0f2e88f7d (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,074 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp35-cp35m-linux_armv7l.whl#sha256=bc4d3ad7d35fa4d09f2e20958dfb1a3f76fd710a23c6c78f6b8c3be0f2e88f7d (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,075 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp34-cp34m-linux_armv7l.whl#sha256=99dc3c2af7219213a309e3f12d2d8c3f934b29c5315b239bb0af9961aa49c08a (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,075 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp34-cp34m-linux_armv6l.whl#sha256=99dc3c2af7219213a309e3f12d2d8c3f934b29c5315b239bb0af9961aa49c08a (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,076 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp37-cp37m-linux_armv6l.whl#sha256=c6a3ec7a4d78a7a62804cd65b6dad03ffa651dc3442bdb707c44724e9d7b3529 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,077 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp37-cp37m-linux_armv7l.whl#sha256=c6a3ec7a4d78a7a62804cd65b6dad03ffa651dc3442bdb707c44724e9d7b3529 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,078 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp39-cp39-linux_armv7l.whl#sha256=b73f51fd6feb1fa2d01e8ec866ffb942cfeefb981066f427ed80d707d41fd359 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,079 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp39-cp39-linux_armv6l.whl#sha256=b73f51fd6feb1fa2d01e8ec866ffb942cfeefb981066f427ed80d707d41fd359 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,080 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp34-cp34m-linux_armv7l.whl#sha256=e35e212576d5aafe8cd28110a8749e9c8330d18d904567fa567e7d17c0121091 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,080 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp34-cp34m-linux_armv6l.whl#sha256=e35e212576d5aafe8cd28110a8749e9c8330d18d904567fa567e7d17c0121091 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,081 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp35-cp35m-linux_armv6l.whl#sha256=84f1d2f265bee8d91a8182cab52a64bb290b631ded8787c87d2a5b4a6ceda98f (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,082 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp35-cp35m-linux_armv7l.whl#sha256=84f1d2f265bee8d91a8182cab52a64bb290b631ded8787c87d2a5b4a6ceda98f (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,083 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp37-cp37m-linux_armv6l.whl#sha256=79ae005751058c6d0ae8f07d7c27565b8b7047f7b8ed0958e64d9a4cdc7c01d5 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,083 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp37-cp37m-linux_armv7l.whl#sha256=79ae005751058c6d0ae8f07d7c27565b8b7047f7b8ed0958e64d9a4cdc7c01d5 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,084 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp39-cp39-linux_armv7l.whl#sha256=d90582d5d32b21b4ed8ea8084798413b2b24635c607cadb2e785c6c8507d0ca0 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,085 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp39-cp39-linux_armv6l.whl#sha256=d90582d5d32b21b4ed8ea8084798413b2b24635c607cadb2e785c6c8507d0ca0 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,086 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp35-cp35m-linux_armv6l.whl#sha256=40eb5738abc65a4ea4a541717a09aca225426c06cb36be6be329b3de73e2064a (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,087 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp35-cp35m-linux_armv7l.whl#sha256=40eb5738abc65a4ea4a541717a09aca225426c06cb36be6be329b3de73e2064a (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,087 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp34-cp34m-linux_armv6l.whl#sha256=88138240aa15f771fc6bac93b5091eb076c9a5b2c5b4844f08638fff1ae58fb5 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,088 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp34-cp34m-linux_armv7l.whl#sha256=88138240aa15f771fc6bac93b5091eb076c9a5b2c5b4844f08638fff1ae58fb5 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,089 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp37-cp37m-linux_armv6l.whl#sha256=fa99b21289c1d1395e7213be1f2da83442d04a06839ddb18055832b8fc0cd147 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,090 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp37-cp37m-linux_armv7l.whl#sha256=fa99b21289c1d1395e7213be1f2da83442d04a06839ddb18055832b8fc0cd147 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,091 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp39-cp39-linux_armv7l.whl#sha256=51ff0c97bbafd1243a607efae14185a8cded80a107c03a701d6a74f1e8ffdbbc (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,091 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp39-cp39-linux_armv6l.whl#sha256=51ff0c97bbafd1243a607efae14185a8cded80a107c03a701d6a74f1e8ffdbbc (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,092 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp34-cp34m-linux_armv6l.whl#sha256=9b3221fab29e565552ada7c673d9755c2f2471b50f29e9ef750c929b19fa5f89 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,093 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp34-cp34m-linux_armv7l.whl#sha256=9b3221fab29e565552ada7c673d9755c2f2471b50f29e9ef750c929b19fa5f89 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,093 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp35-cp35m-linux_armv7l.whl#sha256=a6ffdf5f12d194952f1aa9b3e71fae04a7d9bef57ac0e1af31093e76746ebf84 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,094 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp35-cp35m-linux_armv6l.whl#sha256=a6ffdf5f12d194952f1aa9b3e71fae04a7d9bef57ac0e1af31093e76746ebf84 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,095 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp37-cp37m-linux_armv7l.whl#sha256=f287657d9a53fd46bb0746640449b12c95fdede071751f9aed47e35abb3b6e4d (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,096 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp37-cp37m-linux_armv6l.whl#sha256=f287657d9a53fd46bb0746640449b12c95fdede071751f9aed47e35abb3b6e4d (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,096 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp311-cp311-linux_armv7l.whl#sha256=d691092eb5181b42c73d036ded2f8a1f02b8674d5cb9af3213dd1ac48d4bb5bb (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,097 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp311-cp311-linux_armv6l.whl#sha256=d691092eb5181b42c73d036ded2f8a1f02b8674d5cb9af3213dd1ac48d4bb5bb (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,098 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp39-cp39-linux_armv7l.whl#sha256=aebdb752b6316e4fe49af818624adc8ca4e73cb4b8e6e496b6eb5413e453f395 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,099 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp39-cp39-linux_armv6l.whl#sha256=aebdb752b6316e4fe49af818624adc8ca4e73cb4b8e6e496b6eb5413e453f395 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,100 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp34-cp34m-linux_armv7l.whl#sha256=bb10a9a83274eed0d19b7f7ae2146a7bdba87f572cee50533a338274ed94d544 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,101 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp34-cp34m-linux_armv6l.whl#sha256=bb10a9a83274eed0d19b7f7ae2146a7bdba87f572cee50533a338274ed94d544 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,101 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp35-cp35m-linux_armv7l.whl#sha256=290476b98c5232b8cfa7da3f3ab55cab1daeee460b5c683a6329c47862e59dd5 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,102 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp35-cp35m-linux_armv6l.whl#sha256=290476b98c5232b8cfa7da3f3ab55cab1daeee460b5c683a6329c47862e59dd5 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,103 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp37-cp37m-linux_armv7l.whl#sha256=b8befab0a05b7736d634a7f279404b076b347db1dd59a43d03b3cbe2a92b26f5 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,103 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp37-cp37m-linux_armv6l.whl#sha256=b8befab0a05b7736d634a7f279404b076b347db1dd59a43d03b3cbe2a92b26f5 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,104 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp39-cp39-linux_armv7l.whl#sha256=36203627d34049fa4bd5f68c5ea5982471d2696e71f6ebf3c2f40be512a0ca8f (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,105 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp39-cp39-linux_armv6l.whl#sha256=36203627d34049fa4bd5f68c5ea5982471d2696e71f6ebf3c2f40be512a0ca8f (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,106 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp34-cp34m-linux_armv7l.whl#sha256=99efb16db183cae49bf3225252476b2a114aa8202951ad4beedb456705aaa423 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,106 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp34-cp34m-linux_armv6l.whl#sha256=99efb16db183cae49bf3225252476b2a114aa8202951ad4beedb456705aaa423 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,107 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp35-cp35m-linux_armv6l.whl#sha256=39d01a5d76e0da3ee7e6a69b17bbeefe277dfd5078f2ae7e649d278c488c4d8a (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,108 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp35-cp35m-linux_armv7l.whl#sha256=39d01a5d76e0da3ee7e6a69b17bbeefe277dfd5078f2ae7e649d278c488c4d8a (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,109 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp37-cp37m-linux_armv6l.whl#sha256=d5f3cb2f32922d4dba6072abd7d8ff8bd5d6033c3b85e029c87038c636f2a668 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,110 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp37-cp37m-linux_armv7l.whl#sha256=d5f3cb2f32922d4dba6072abd7d8ff8bd5d6033c3b85e029c87038c636f2a668 (from https://www.piwheels.org/simple/ampal/) 2023-09-10T15:13:05,111 Skipping link: not a file: https://www.piwheels.org/simple/ampal/ 2023-09-10T15:13:05,112 Skipping link: not a file: https://pypi.org/simple/ampal/ 2023-09-10T15:13:05,146 Given no hashes to check 1 links for project 'ampal': discarding no candidates 2023-09-10T15:13:05,165 Collecting ampal==1.1.0 2023-09-10T15:13:05,168 Created temporary directory: /tmp/pip-unpack-sev73fmj 2023-09-10T15:13:05,886 Downloading AMPAL-1.1.0.tar.gz (1.2 MB) 2023-09-10T15:13:06,323 Added ampal==1.1.0 from https://files.pythonhosted.org/packages/29/39/ac32680ba515731a81942c3a1bb8d0731fc0da02185885794ccf51dd604b/AMPAL-1.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-86stuu5q' 2023-09-10T15:13:06,324 Running setup.py (path:/tmp/pip-wheel-9x89fjie/ampal_4e869884aeb5470e87d39df1e4f39ba1/setup.py) egg_info for package ampal 2023-09-10T15:13:06,325 Created temporary directory: /tmp/pip-pip-egg-info-t61cg8go 2023-09-10T15:13:06,326 Preparing metadata (setup.py): started 2023-09-10T15:13:06,327 Running command python setup.py egg_info 2023-09-10T15:13:08,485 /usr/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-9x89fjie/ampal_4e869884aeb5470e87d39df1e4f39ba1/src/ampal/geometry.pyx 2023-09-10T15:13:08,485 tree = Parsing.p_module(s, pxd, full_module_name) 2023-09-10T15:13:11,328 Compiling src/ampal/geometry.pyx because it changed. 2023-09-10T15:13:11,329 [1/1] Cythonizing src/ampal/geometry.pyx 2023-09-10T15:13:11,768 running egg_info 2023-09-10T15:13:11,770 creating /tmp/pip-pip-egg-info-t61cg8go/AMPAL.egg-info 2023-09-10T15:13:11,793 writing /tmp/pip-pip-egg-info-t61cg8go/AMPAL.egg-info/PKG-INFO 2023-09-10T15:13:11,797 writing dependency_links to /tmp/pip-pip-egg-info-t61cg8go/AMPAL.egg-info/dependency_links.txt 2023-09-10T15:13:11,798 writing requirements to /tmp/pip-pip-egg-info-t61cg8go/AMPAL.egg-info/requires.txt 2023-09-10T15:13:11,799 writing top-level names to /tmp/pip-pip-egg-info-t61cg8go/AMPAL.egg-info/top_level.txt 2023-09-10T15:13:11,801 writing manifest file '/tmp/pip-pip-egg-info-t61cg8go/AMPAL.egg-info/SOURCES.txt' 2023-09-10T15:13:11,901 reading manifest file '/tmp/pip-pip-egg-info-t61cg8go/AMPAL.egg-info/SOURCES.txt' 2023-09-10T15:13:11,902 reading manifest template 'MANIFEST.in' 2023-09-10T15:13:11,904 warning: no files found matching 'LICENSE.txt' 2023-09-10T15:13:11,920 writing manifest file '/tmp/pip-pip-egg-info-t61cg8go/AMPAL.egg-info/SOURCES.txt' 2023-09-10T15:13:12,236 Preparing metadata (setup.py): finished with status 'done' 2023-09-10T15:13:12,240 Source in /tmp/pip-wheel-9x89fjie/ampal_4e869884aeb5470e87d39df1e4f39ba1 has version 1.1.0, which satisfies requirement ampal==1.1.0 from https://files.pythonhosted.org/packages/29/39/ac32680ba515731a81942c3a1bb8d0731fc0da02185885794ccf51dd604b/AMPAL-1.1.0.tar.gz 2023-09-10T15:13:12,241 Removed ampal==1.1.0 from https://files.pythonhosted.org/packages/29/39/ac32680ba515731a81942c3a1bb8d0731fc0da02185885794ccf51dd604b/AMPAL-1.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-86stuu5q' 2023-09-10T15:13:12,245 Created temporary directory: /tmp/pip-unpack-azldjzy1 2023-09-10T15:13:12,246 Created temporary directory: /tmp/pip-unpack-1xh1ghvi 2023-09-10T15:13:12,253 Building wheels for collected packages: ampal 2023-09-10T15:13:12,257 Created temporary directory: /tmp/pip-wheel-za1hoy74 2023-09-10T15:13:12,257 Building wheel for ampal (setup.py): started 2023-09-10T15:13:12,259 Destination directory: /tmp/pip-wheel-za1hoy74 2023-09-10T15:13:12,259 Running command python setup.py bdist_wheel 2023-09-10T15:13:13,733 running bdist_wheel 2023-09-10T15:13:13,828 running build 2023-09-10T15:13:13,828 running build_py 2023-09-10T15:13:13,855 creating build 2023-09-10T15:13:13,855 creating build/lib.linux-armv7l-cpython-311 2023-09-10T15:13:13,856 creating build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T15:13:13,857 copying src/ampal/analyse_protein.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T15:13:13,860 copying src/ampal/interactions.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T15:13:13,862 copying src/ampal/data.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T15:13:13,864 copying src/ampal/ligands.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T15:13:13,865 copying src/ampal/protein.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T15:13:13,868 copying src/ampal/__init__.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T15:13:13,869 copying src/ampal/base_ampal.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T15:13:13,872 copying src/ampal/nucleic_acid.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T15:13:13,874 copying src/ampal/assembly.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T15:13:13,876 copying src/ampal/ampal_warnings.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T15:13:13,877 copying src/ampal/pdb_parser.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T15:13:13,880 copying src/ampal/amino_acids.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T15:13:13,882 copying src/ampal/pseudo_atoms.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T15:13:13,884 running egg_info 2023-09-10T15:13:13,938 writing src/AMPAL.egg-info/PKG-INFO 2023-09-10T15:13:13,940 writing dependency_links to src/AMPAL.egg-info/dependency_links.txt 2023-09-10T15:13:13,942 writing requirements to src/AMPAL.egg-info/requires.txt 2023-09-10T15:13:13,943 writing top-level names to src/AMPAL.egg-info/top_level.txt 2023-09-10T15:13:13,969 reading manifest file 'src/AMPAL.egg-info/SOURCES.txt' 2023-09-10T15:13:13,972 reading manifest template 'MANIFEST.in' 2023-09-10T15:13:13,972 warning: no files found matching 'LICENSE.txt' 2023-09-10T15:13:13,989 writing manifest file 'src/AMPAL.egg-info/SOURCES.txt' 2023-09-10T15:13:13,992 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'ampal.__pycache__' is absent from the `packages` configuration. 2023-09-10T15:13:13,992 !! 2023-09-10T15:13:13,993 ******************************************************************************** 2023-09-10T15:13:13,994 ############################ 2023-09-10T15:13:13,995 # Package would be ignored # 2023-09-10T15:13:13,995 ############################ 2023-09-10T15:13:13,996 Python recognizes 'ampal.__pycache__' as an importable package[^1], 2023-09-10T15:13:13,996 but it is absent from setuptools' `packages` configuration. 2023-09-10T15:13:13,997 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-10T15:13:13,998 package, please make sure that 'ampal.__pycache__' is explicitly added 2023-09-10T15:13:13,999 to the `packages` configuration field. 2023-09-10T15:13:14,000 Alternatively, you can also rely on setuptools' discovery methods 2023-09-10T15:13:14,000 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-10T15:13:14,001 instead of `find_packages(...)`/`find:`). 2023-09-10T15:13:14,002 You can read more about "package discovery" on setuptools documentation page: 2023-09-10T15:13:14,003 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-10T15:13:14,004 If you don't want 'ampal.__pycache__' to be distributed and are 2023-09-10T15:13:14,005 already explicitly excluding 'ampal.__pycache__' via 2023-09-10T15:13:14,005 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-10T15:13:14,006 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-10T15:13:14,006 combination with a more fine grained `package-data` configuration. 2023-09-10T15:13:14,008 You can read more about "package data files" on setuptools documentation page: 2023-09-10T15:13:14,019 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-10T15:13:14,030 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-10T15:13:14,031 even if it does not contain any `.py` files. 2023-09-10T15:13:14,032 On the other hand, currently there is no concept of package data 2023-09-10T15:13:14,039 directory, all directories are treated like packages. 2023-09-10T15:13:14,039 ******************************************************************************** 2023-09-10T15:13:14,040 !! 2023-09-10T15:13:14,041 check.warn(importable) 2023-09-10T15:13:14,041 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'ampal.datafiles' is absent from the `packages` configuration. 2023-09-10T15:13:14,042 !! 2023-09-10T15:13:14,042 ******************************************************************************** 2023-09-10T15:13:14,043 ############################ 2023-09-10T15:13:14,043 # Package would be ignored # 2023-09-10T15:13:14,044 ############################ 2023-09-10T15:13:14,044 Python recognizes 'ampal.datafiles' as an importable package[^1], 2023-09-10T15:13:14,046 but it is absent from setuptools' `packages` configuration. 2023-09-10T15:13:14,050 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-10T15:13:14,055 package, please make sure that 'ampal.datafiles' is explicitly added 2023-09-10T15:13:14,066 to the `packages` configuration field. 2023-09-10T15:13:14,077 Alternatively, you can also rely on setuptools' discovery methods 2023-09-10T15:13:14,078 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-10T15:13:14,078 instead of `find_packages(...)`/`find:`). 2023-09-10T15:13:14,079 You can read more about "package discovery" on setuptools documentation page: 2023-09-10T15:13:14,080 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-10T15:13:14,081 If you don't want 'ampal.datafiles' to be distributed and are 2023-09-10T15:13:14,082 already explicitly excluding 'ampal.datafiles' via 2023-09-10T15:13:14,082 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-10T15:13:14,083 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-10T15:13:14,083 combination with a more fine grained `package-data` configuration. 2023-09-10T15:13:14,084 You can read more about "package data files" on setuptools documentation page: 2023-09-10T15:13:14,085 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-10T15:13:14,087 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-10T15:13:14,088 even if it does not contain any `.py` files. 2023-09-10T15:13:14,088 On the other hand, currently there is no concept of package data 2023-09-10T15:13:14,089 directory, all directories are treated like packages. 2023-09-10T15:13:14,089 ******************************************************************************** 2023-09-10T15:13:14,090 !! 2023-09-10T15:13:14,091 check.warn(importable) 2023-09-10T15:13:14,091 copying src/ampal/geometry.c -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T15:13:14,092 copying src/ampal/geometry.cpython-36m-x86_64-linux-gnu.so -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T15:13:14,092 copying src/ampal/geometry.pyx -> build/lib.linux-armv7l-cpython-311/ampal 2023-09-10T15:13:14,093 creating build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T15:13:14,094 copying src/ampal/__pycache__/__init__.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T15:13:14,094 copying src/ampal/__pycache__/amino_acids.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T15:13:14,095 copying src/ampal/__pycache__/ampal_warnings.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T15:13:14,095 copying src/ampal/__pycache__/analyse_protein.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T15:13:14,096 copying src/ampal/__pycache__/assembly.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T15:13:14,098 copying src/ampal/__pycache__/base_ampal.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T15:13:14,100 copying src/ampal/__pycache__/data.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T15:13:14,102 copying src/ampal/__pycache__/interactions.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T15:13:14,105 copying src/ampal/__pycache__/ligands.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T15:13:14,107 copying src/ampal/__pycache__/nucleic_acid.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T15:13:14,109 copying src/ampal/__pycache__/pdb_parser.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T15:13:14,112 copying src/ampal/__pycache__/protein.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T15:13:14,114 copying src/ampal/__pycache__/pseudo_atoms.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/ampal/__pycache__ 2023-09-10T15:13:14,117 creating build/lib.linux-armv7l-cpython-311/ampal/datafiles 2023-09-10T15:13:14,118 copying src/ampal/datafiles/amino_acids.json -> build/lib.linux-armv7l-cpython-311/ampal/datafiles 2023-09-10T15:13:14,122 copying src/ampal/datafiles/chemical_elements.json -> build/lib.linux-armv7l-cpython-311/ampal/datafiles 2023-09-10T15:13:14,125 copying src/ampal/datafiles/pdb_atom_column_format.json -> build/lib.linux-armv7l-cpython-311/ampal/datafiles 2023-09-10T15:13:14,129 running build_ext 2023-09-10T15:13:14,136 building 'ampal.geometry' extension 2023-09-10T15:13:14,136 creating build/temp.linux-armv7l-cpython-311 2023-09-10T15:13:14,137 creating build/temp.linux-armv7l-cpython-311/src 2023-09-10T15:13:14,138 creating build/temp.linux-armv7l-cpython-311/src/ampal 2023-09-10T15:13:14,138 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c src/ampal/geometry.c -o build/temp.linux-armv7l-cpython-311/src/ampal/geometry.o 2023-09-10T15:13:20,147 src/ampal/geometry.c:7286:18: warning: ‘__pyx_f_5ampal_8geometry__unit_vector’ defined but not used [-Wunused-function] 2023-09-10T15:13:20,148 7286 | static PyObject *__pyx_f_5ampal_8geometry__unit_vector(double *__pyx_v_a) { 2023-09-10T15:13:20,149 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-10T15:13:20,154 src/ampal/geometry.c:6356:15: warning: ‘__pyx_f_5ampal_8geometry__dot_product_2d’ defined but not used [-Wunused-function] 2023-09-10T15:13:20,155 6356 | static double __pyx_f_5ampal_8geometry__dot_product_2d(double *__pyx_v_a, double *__pyx_v_b) { 2023-09-10T15:13:20,156 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-10T15:14:47,304 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/ampal/geometry.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/ampal/geometry.cpython-311-arm-linux-gnueabihf.so 2023-09-10T15:14:47,537 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-09-10T15:14:47,538 !! 2023-09-10T15:14:47,539 ******************************************************************************** 2023-09-10T15:14:47,540 Please avoid running ``setup.py`` directly. 2023-09-10T15:14:47,541 Instead, use pypa/build, pypa/installer or other 2023-09-10T15:14:47,541 standards-based tools. 2023-09-10T15:14:47,543 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-09-10T15:14:47,544 ******************************************************************************** 2023-09-10T15:14:47,545 !! 2023-09-10T15:14:47,545 self.initialize_options() 2023-09-10T15:14:47,564 installing to build/bdist.linux-armv7l/wheel 2023-09-10T15:14:47,565 running install 2023-09-10T15:14:47,589 running install_lib 2023-09-10T15:14:47,613 creating build/bdist.linux-armv7l 2023-09-10T15:14:47,614 creating build/bdist.linux-armv7l/wheel 2023-09-10T15:14:47,615 creating build/bdist.linux-armv7l/wheel/ampal 2023-09-10T15:14:47,616 copying build/lib.linux-armv7l-cpython-311/ampal/analyse_protein.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T15:14:47,619 copying build/lib.linux-armv7l-cpython-311/ampal/interactions.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T15:14:47,621 copying build/lib.linux-armv7l-cpython-311/ampal/data.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T15:14:47,623 creating build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T15:14:47,624 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/ligands.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T15:14:47,626 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/pseudo_atoms.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T15:14:47,628 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/data.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T15:14:47,630 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/pdb_parser.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T15:14:47,632 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/ampal_warnings.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T15:14:47,634 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/nucleic_acid.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T15:14:47,637 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/__init__.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T15:14:47,638 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/protein.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T15:14:47,642 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/analyse_protein.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T15:14:47,644 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/base_ampal.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T15:14:47,647 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/assembly.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T15:14:47,649 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/interactions.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T15:14:47,652 copying build/lib.linux-armv7l-cpython-311/ampal/__pycache__/amino_acids.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/ampal/__pycache__ 2023-09-10T15:14:47,654 copying build/lib.linux-armv7l-cpython-311/ampal/ligands.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T15:14:47,656 copying build/lib.linux-armv7l-cpython-311/ampal/geometry.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T15:14:47,699 copying build/lib.linux-armv7l-cpython-311/ampal/geometry.pyx -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T15:14:47,702 copying build/lib.linux-armv7l-cpython-311/ampal/protein.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T15:14:47,705 copying build/lib.linux-armv7l-cpython-311/ampal/geometry.c -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T15:14:47,736 copying build/lib.linux-armv7l-cpython-311/ampal/__init__.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T15:14:47,739 copying build/lib.linux-armv7l-cpython-311/ampal/geometry.cpython-36m-x86_64-linux-gnu.so -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T15:14:47,793 copying build/lib.linux-armv7l-cpython-311/ampal/base_ampal.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T15:14:47,795 copying build/lib.linux-armv7l-cpython-311/ampal/nucleic_acid.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T15:14:47,797 copying build/lib.linux-armv7l-cpython-311/ampal/assembly.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T15:14:47,800 copying build/lib.linux-armv7l-cpython-311/ampal/ampal_warnings.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T15:14:47,802 creating build/bdist.linux-armv7l/wheel/ampal/datafiles 2023-09-10T15:14:47,803 copying build/lib.linux-armv7l-cpython-311/ampal/datafiles/amino_acids.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles 2023-09-10T15:14:47,807 copying build/lib.linux-armv7l-cpython-311/ampal/datafiles/chemical_elements.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles 2023-09-10T15:14:47,811 copying build/lib.linux-armv7l-cpython-311/ampal/datafiles/pdb_atom_column_format.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles 2023-09-10T15:14:47,814 copying build/lib.linux-armv7l-cpython-311/ampal/pdb_parser.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T15:14:47,816 copying build/lib.linux-armv7l-cpython-311/ampal/amino_acids.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T15:14:47,818 copying build/lib.linux-armv7l-cpython-311/ampal/pseudo_atoms.py -> build/bdist.linux-armv7l/wheel/ampal 2023-09-10T15:14:47,821 running install_egg_info 2023-09-10T15:14:47,851 Copying src/AMPAL.egg-info to build/bdist.linux-armv7l/wheel/AMPAL-1.1.0-py3.11.egg-info 2023-09-10T15:14:47,863 running install_scripts 2023-09-10T15:14:47,910 creating build/bdist.linux-armv7l/wheel/AMPAL-1.1.0.dist-info/WHEEL 2023-09-10T15:14:47,913 creating '/tmp/pip-wheel-za1hoy74/AMPAL-1.1.0-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-10T15:14:47,916 adding 'ampal/__init__.py' 2023-09-10T15:14:47,919 adding 'ampal/amino_acids.py' 2023-09-10T15:14:47,921 adding 'ampal/ampal_warnings.py' 2023-09-10T15:14:47,924 adding 'ampal/analyse_protein.py' 2023-09-10T15:14:47,926 adding 'ampal/assembly.py' 2023-09-10T15:14:47,929 adding 'ampal/base_ampal.py' 2023-09-10T15:14:47,931 adding 'ampal/data.py' 2023-09-10T15:14:48,060 adding 'ampal/geometry.c' 2023-09-10T15:14:48,558 adding 'ampal/geometry.cpython-311-arm-linux-gnueabihf.so' 2023-09-10T15:14:48,973 adding 'ampal/geometry.cpython-36m-x86_64-linux-gnu.so' 2023-09-10T15:14:49,002 adding 'ampal/geometry.pyx' 2023-09-10T15:14:49,004 adding 'ampal/interactions.py' 2023-09-10T15:14:49,005 adding 'ampal/ligands.py' 2023-09-10T15:14:49,006 adding 'ampal/nucleic_acid.py' 2023-09-10T15:14:49,009 adding 'ampal/pdb_parser.py' 2023-09-10T15:14:49,013 adding 'ampal/protein.py' 2023-09-10T15:14:49,015 adding 'ampal/pseudo_atoms.py' 2023-09-10T15:14:49,017 adding 'ampal/__pycache__/__init__.cpython-36.pyc' 2023-09-10T15:14:49,019 adding 'ampal/__pycache__/amino_acids.cpython-36.pyc' 2023-09-10T15:14:49,020 adding 'ampal/__pycache__/ampal_warnings.cpython-36.pyc' 2023-09-10T15:14:49,023 adding 'ampal/__pycache__/analyse_protein.cpython-36.pyc' 2023-09-10T15:14:49,027 adding 'ampal/__pycache__/assembly.cpython-36.pyc' 2023-09-10T15:14:49,031 adding 'ampal/__pycache__/base_ampal.cpython-36.pyc' 2023-09-10T15:14:49,032 adding 'ampal/__pycache__/data.cpython-36.pyc' 2023-09-10T15:14:49,034 adding 'ampal/__pycache__/interactions.cpython-36.pyc' 2023-09-10T15:14:49,035 adding 'ampal/__pycache__/ligands.cpython-36.pyc' 2023-09-10T15:14:49,037 adding 'ampal/__pycache__/nucleic_acid.cpython-36.pyc' 2023-09-10T15:14:49,039 adding 'ampal/__pycache__/pdb_parser.cpython-36.pyc' 2023-09-10T15:14:49,044 adding 'ampal/__pycache__/protein.cpython-36.pyc' 2023-09-10T15:14:49,047 adding 'ampal/__pycache__/pseudo_atoms.cpython-36.pyc' 2023-09-10T15:14:49,054 adding 'ampal/datafiles/amino_acids.json' 2023-09-10T15:14:49,059 adding 'ampal/datafiles/chemical_elements.json' 2023-09-10T15:14:49,076 adding 'ampal/datafiles/pdb_atom_column_format.json' 2023-09-10T15:14:49,078 adding 'AMPAL-1.1.0.dist-info/METADATA' 2023-09-10T15:14:49,079 adding 'AMPAL-1.1.0.dist-info/WHEEL' 2023-09-10T15:14:49,080 adding 'AMPAL-1.1.0.dist-info/top_level.txt' 2023-09-10T15:14:49,081 adding 'AMPAL-1.1.0.dist-info/RECORD' 2023-09-10T15:14:49,114 removing build/bdist.linux-armv7l/wheel 2023-09-10T15:14:49,266 Building wheel for ampal (setup.py): finished with status 'done' 2023-09-10T15:14:49,295 Created wheel for ampal: filename=AMPAL-1.1.0-cp311-cp311-linux_armv7l.whl size=2237833 sha256=9a3125cfc6ec5776f4355bbc88c7f68fb045975781821b8430f94db3fd5b6cc3 2023-09-10T15:14:49,296 Stored in directory: /tmp/pip-ephem-wheel-cache-8faztw64/wheels/bc/c0/bb/7272cd6c38bb3401bde8458578a0cac177535e8086a55bdd88 2023-09-10T15:14:49,307 Successfully built ampal 2023-09-10T15:14:49,362 Removed build tracker: '/tmp/pip-build-tracker-86stuu5q'