2023-09-10T15:33:05,586 Created temporary directory: /tmp/pip-build-tracker-0dyihjo4
2023-09-10T15:33:05,587 Initialized build tracking at /tmp/pip-build-tracker-0dyihjo4
2023-09-10T15:33:05,588 Created build tracker: /tmp/pip-build-tracker-0dyihjo4
2023-09-10T15:33:05,588 Entered build tracker: /tmp/pip-build-tracker-0dyihjo4
2023-09-10T15:33:05,589 Created temporary directory: /tmp/pip-wheel-mvq43268
2023-09-10T15:33:05,592 Created temporary directory: /tmp/pip-ephem-wheel-cache-gfneap9r
2023-09-10T15:33:05,616 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-10T15:33:05,620 2 location(s) to search for versions of hatshufflepy:
2023-09-10T15:33:05,620 * https://pypi.org/simple/hatshufflepy/
2023-09-10T15:33:05,620 * https://www.piwheels.org/simple/hatshufflepy/
2023-09-10T15:33:05,620 Fetching project page and analyzing links: https://pypi.org/simple/hatshufflepy/
2023-09-10T15:33:05,621 Getting page https://pypi.org/simple/hatshufflepy/
2023-09-10T15:33:05,623 Found index url https://pypi.org/simple/
2023-09-10T15:33:05,761 Fetched page https://pypi.org/simple/hatshufflepy/ as application/vnd.pypi.simple.v1+json
2023-09-10T15:33:05,763   Found link https://files.pythonhosted.org/packages/2f/55/14d78ef177d725c0ddec3583bd5b9383440e399fa94e00aab8e519a0f850/hatshufflepy-0.0.1.tar.gz (from https://pypi.org/simple/hatshufflepy/), version: 0.0.1
2023-09-10T15:33:05,764   Found link https://files.pythonhosted.org/packages/65/e3/88ea19e93c06bd31230b273b46bad89c3fd39f5a25edc5485a2e8bc47802/hatshufflepy-0.0.2.tar.gz (from https://pypi.org/simple/hatshufflepy/), version: 0.0.2
2023-09-10T15:33:05,765   Found link https://files.pythonhosted.org/packages/27/6f/232dfb1720bec6a4327b3ea607eb148fb7e9c056d76c550993415d21c87a/hatshufflepy-0.0.3.tar.gz (from https://pypi.org/simple/hatshufflepy/), version: 0.0.3
2023-09-10T15:33:05,765   Found link https://files.pythonhosted.org/packages/31/bc/f2a7c97edee256489b4f10461688486d5f811a94a2ab1b6489f3ae7b624b/hatshufflepy-0.0.4.tar.gz (from https://pypi.org/simple/hatshufflepy/), version: 0.0.4
2023-09-10T15:33:05,766   Found link https://files.pythonhosted.org/packages/a9/0b/42071a0bef328b560c14eb80ce532ecd63a4178f6f3bec4b5c04eae9af8e/hatshufflepy-0.0.5.tar.gz (from https://pypi.org/simple/hatshufflepy/), version: 0.0.5
2023-09-10T15:33:05,767   Found link https://files.pythonhosted.org/packages/c3/5b/2bc2424b1b81c13141bacaff629c9be11a9442d165feb7b91312b16f991e/hatshufflepy-0.0.6.tar.gz (from https://pypi.org/simple/hatshufflepy/), version: 0.0.6
2023-09-10T15:33:05,768 Fetching project page and analyzing links: https://www.piwheels.org/simple/hatshufflepy/
2023-09-10T15:33:05,769 Getting page https://www.piwheels.org/simple/hatshufflepy/
2023-09-10T15:33:05,770 Found index url https://www.piwheels.org/simple/
2023-09-10T15:33:06,310 Fetched page https://www.piwheels.org/simple/hatshufflepy/ as text/html
2023-09-10T15:33:06,311 Skipping link: not a file: https://www.piwheels.org/simple/hatshufflepy/
2023-09-10T15:33:06,312 Skipping link: not a file: https://pypi.org/simple/hatshufflepy/
2023-09-10T15:33:06,331 Given no hashes to check 1 links for project 'hatshufflepy': discarding no candidates
2023-09-10T15:33:06,349 Collecting hatshufflepy==0.0.5
2023-09-10T15:33:06,352   Created temporary directory: /tmp/pip-unpack-ur9itb_k
2023-09-10T15:33:06,597   Downloading hatshufflepy-0.0.5.tar.gz (4.7 MB)
2023-09-10T15:33:08,870   Added hatshufflepy==0.0.5 from https://files.pythonhosted.org/packages/a9/0b/42071a0bef328b560c14eb80ce532ecd63a4178f6f3bec4b5c04eae9af8e/hatshufflepy-0.0.5.tar.gz to build tracker '/tmp/pip-build-tracker-0dyihjo4'
2023-09-10T15:33:08,871   Running setup.py (path:/tmp/pip-wheel-mvq43268/hatshufflepy_1eaae3898461475f90197afc36b975b1/setup.py) egg_info for package hatshufflepy
2023-09-10T15:33:08,872   Created temporary directory: /tmp/pip-pip-egg-info-dkw5h4tw
2023-09-10T15:33:08,873   Preparing metadata (setup.py): started
2023-09-10T15:33:08,874   Running command python setup.py egg_info
2023-09-10T15:33:11,049   /usr/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-mvq43268/hatshufflepy_1eaae3898461475f90197afc36b975b1/hatshufflepy/hatshufflepy.pxd
2023-09-10T15:33:11,049     tree = Parsing.p_module(s, pxd, full_module_name)
2023-09-10T15:33:11,674   /tmp/pip-wheel-mvq43268/hatshufflepy_1eaae3898461475f90197afc36b975b1
2023-09-10T15:33:11,674   Compiling hatshufflepy/hatshufflepy.pyx because it changed.
2023-09-10T15:33:11,675   [1/1] Cythonizing hatshufflepy/hatshufflepy.pyx
2023-09-10T15:33:11,708   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-10T15:33:11,709   !!

2023-09-10T15:33:11,710           ********************************************************************************
2023-09-10T15:33:11,710           Usage of dash-separated 'description-file' will not be supported in future
2023-09-10T15:33:11,711           versions. Please use the underscore name 'description_file' instead.

2023-09-10T15:33:11,712           By 2023-Sep-26, you need to update your project and remove deprecated calls
2023-09-10T15:33:11,712           or your builds will no longer be supported.

2023-09-10T15:33:11,713           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-10T15:33:11,714           ********************************************************************************

2023-09-10T15:33:11,715   !!
2023-09-10T15:33:11,715     opt = self.warn_dash_deprecation(opt, section)
2023-09-10T15:33:12,085   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-10T15:33:12,085   !!

2023-09-10T15:33:12,086           ********************************************************************************
2023-09-10T15:33:12,087           Usage of dash-separated 'description-file' will not be supported in future
2023-09-10T15:33:12,087           versions. Please use the underscore name 'description_file' instead.

2023-09-10T15:33:12,088           By 2023-Sep-26, you need to update your project and remove deprecated calls
2023-09-10T15:33:12,089           or your builds will no longer be supported.

2023-09-10T15:33:12,090           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-10T15:33:12,091           ********************************************************************************

2023-09-10T15:33:12,092   !!
2023-09-10T15:33:12,093     opt = self.warn_dash_deprecation(opt, section)
2023-09-10T15:33:12,126   running egg_info
2023-09-10T15:33:12,128   creating /tmp/pip-pip-egg-info-dkw5h4tw/hatshufflepy.egg-info
2023-09-10T15:33:12,152   writing /tmp/pip-pip-egg-info-dkw5h4tw/hatshufflepy.egg-info/PKG-INFO
2023-09-10T15:33:12,155   writing dependency_links to /tmp/pip-pip-egg-info-dkw5h4tw/hatshufflepy.egg-info/dependency_links.txt
2023-09-10T15:33:12,157   writing requirements to /tmp/pip-pip-egg-info-dkw5h4tw/hatshufflepy.egg-info/requires.txt
2023-09-10T15:33:12,158   writing top-level names to /tmp/pip-pip-egg-info-dkw5h4tw/hatshufflepy.egg-info/top_level.txt
2023-09-10T15:33:12,160   writing manifest file '/tmp/pip-pip-egg-info-dkw5h4tw/hatshufflepy.egg-info/SOURCES.txt'
2023-09-10T15:33:12,209   reading manifest file '/tmp/pip-pip-egg-info-dkw5h4tw/hatshufflepy.egg-info/SOURCES.txt'
2023-09-10T15:33:12,211   reading manifest template 'MANIFEST.in'
2023-09-10T15:33:12,257   writing manifest file '/tmp/pip-pip-egg-info-dkw5h4tw/hatshufflepy.egg-info/SOURCES.txt'
2023-09-10T15:33:12,516   Preparing metadata (setup.py): finished with status 'done'
2023-09-10T15:33:12,520   Source in /tmp/pip-wheel-mvq43268/hatshufflepy_1eaae3898461475f90197afc36b975b1 has version 0.0.5, which satisfies requirement hatshufflepy==0.0.5 from https://files.pythonhosted.org/packages/a9/0b/42071a0bef328b560c14eb80ce532ecd63a4178f6f3bec4b5c04eae9af8e/hatshufflepy-0.0.5.tar.gz
2023-09-10T15:33:12,521   Removed hatshufflepy==0.0.5 from https://files.pythonhosted.org/packages/a9/0b/42071a0bef328b560c14eb80ce532ecd63a4178f6f3bec4b5c04eae9af8e/hatshufflepy-0.0.5.tar.gz from build tracker '/tmp/pip-build-tracker-0dyihjo4'
2023-09-10T15:33:12,525 Created temporary directory: /tmp/pip-unpack-2f52gs2g
2023-09-10T15:33:12,526 Created temporary directory: /tmp/pip-unpack-otbwozwl
2023-09-10T15:33:12,530 Building wheels for collected packages: hatshufflepy
2023-09-10T15:33:12,533   Created temporary directory: /tmp/pip-wheel-0cgh90_h
2023-09-10T15:33:12,534   Building wheel for hatshufflepy (setup.py): started
2023-09-10T15:33:12,535   Destination directory: /tmp/pip-wheel-0cgh90_h
2023-09-10T15:33:12,535   Running command python setup.py bdist_wheel
2023-09-10T15:33:13,098   /tmp/pip-wheel-mvq43268/hatshufflepy_1eaae3898461475f90197afc36b975b1
2023-09-10T15:33:13,650   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-10T15:33:13,651   !!

2023-09-10T15:33:13,652           ********************************************************************************
2023-09-10T15:33:13,652           Usage of dash-separated 'description-file' will not be supported in future
2023-09-10T15:33:13,653           versions. Please use the underscore name 'description_file' instead.

2023-09-10T15:33:13,654           By 2023-Sep-26, you need to update your project and remove deprecated calls
2023-09-10T15:33:13,654           or your builds will no longer be supported.

2023-09-10T15:33:13,655           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-10T15:33:13,656           ********************************************************************************

2023-09-10T15:33:13,657   !!
2023-09-10T15:33:13,658     opt = self.warn_dash_deprecation(opt, section)
2023-09-10T15:33:14,020   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-10T15:33:14,021   !!

2023-09-10T15:33:14,022           ********************************************************************************
2023-09-10T15:33:14,022           Usage of dash-separated 'description-file' will not be supported in future
2023-09-10T15:33:14,023           versions. Please use the underscore name 'description_file' instead.

2023-09-10T15:33:14,024           By 2023-Sep-26, you need to update your project and remove deprecated calls
2023-09-10T15:33:14,025           or your builds will no longer be supported.

2023-09-10T15:33:14,026           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-10T15:33:14,026           ********************************************************************************

2023-09-10T15:33:14,028   !!
2023-09-10T15:33:14,028     opt = self.warn_dash_deprecation(opt, section)
2023-09-10T15:33:14,057   running bdist_wheel
2023-09-10T15:33:14,127   running build
2023-09-10T15:33:14,128   running build_ext
2023-09-10T15:33:14,134   building 'hatshufflepy' extension
2023-09-10T15:33:14,134   creating build
2023-09-10T15:33:14,135   creating build/temp.linux-armv7l-cpython-311
2023-09-10T15:33:14,136   creating build/temp.linux-armv7l-cpython-311/hatshufflepy
2023-09-10T15:33:14,137   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ihatshufflepy/libhatshuffle/include/libhatshuffle -Ihatshufflepy/libhatshuffle/include -Ilibhatshuffle/include/libff -I/usr/include/python3.11 -c hatshufflepy/hatshufflepy.cpp -o build/temp.linux-armv7l-cpython-311/hatshufflepy/hatshufflepy.o -std=c++11 -fPIC -shared -w -static -O3
2023-09-10T15:33:32,381   creating build/lib.linux-armv7l-cpython-311
2023-09-10T15:33:32,381   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/hatshufflepy/hatshufflepy.o -L/usr/local/lib -Lhatshufflepy/libhatshuffle/lib -L/usr/lib/arm-linux-gnueabihf -Wl,--enable-new-dtags,-R/tmp/pip-wheel-mvq43268/hatshufflepy_1eaae3898461475f90197afc36b975b1/hatshufflepy/libhatshuffle/lib -Wl,--enable-new-dtags,-R/usr/local/lib/python3.11/dist-packages/hatshufflepy -Wl,--enable-new-dtags,-R/usr/lib/python3/dist-packages/hatshufflepy -lzm -lff -lhatshuffle -o build/lib.linux-armv7l-cpython-311/hatshufflepy.cpython-311-arm-linux-gnueabihf.so -lgmp -fopenmp -g
2023-09-10T15:33:32,410   hatshufflepy/libhatshuffle/lib/libzm.so: file not recognized: file format not recognized
2023-09-10T15:33:32,411   collect2: error: ld returned 1 exit status
2023-09-10T15:33:32,412   error: command '/usr/bin/arm-linux-gnueabihf-g++' failed with exit code 1
2023-09-10T15:33:32,560   ERROR: [present-rich] python setup.py bdist_wheel exited with 1
2023-09-10T15:33:32,573   [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c '
2023-09-10T15:33:32,573   exec(compile('"'"''"'"''"'"'
2023-09-10T15:33:32,573   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-10T15:33:32,573   #
2023-09-10T15:33:32,573   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-10T15:33:32,573   #   import from `distutils.core` to work with newer packaging standards.
2023-09-10T15:33:32,573   # - It provides a clear error message when setuptools is not installed.
2023-09-10T15:33:32,573   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-10T15:33:32,573   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-10T15:33:32,573   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-10T15:33:32,573   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-10T15:33:32,573   import os, sys, tokenize
2023-09-10T15:33:32,573   
2023-09-10T15:33:32,573   try:
2023-09-10T15:33:32,573       import setuptools
2023-09-10T15:33:32,573   except ImportError as error:
2023-09-10T15:33:32,573       print(
2023-09-10T15:33:32,573           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-10T15:33:32,573           "the build environment.",
2023-09-10T15:33:32,573           file=sys.stderr,
2023-09-10T15:33:32,573       )
2023-09-10T15:33:32,573       sys.exit(1)
2023-09-10T15:33:32,573   
2023-09-10T15:33:32,573   __file__ = %r
2023-09-10T15:33:32,573   sys.argv[0] = __file__
2023-09-10T15:33:32,573   
2023-09-10T15:33:32,573   if os.path.exists(__file__):
2023-09-10T15:33:32,573       filename = __file__
2023-09-10T15:33:32,573       with tokenize.open(__file__) as f:
2023-09-10T15:33:32,573           setup_py_code = f.read()
2023-09-10T15:33:32,573   else:
2023-09-10T15:33:32,573       filename = "<auto-generated setuptools caller>"
2023-09-10T15:33:32,573       setup_py_code = "from setuptools import setup; setup()"
2023-09-10T15:33:32,573   
2023-09-10T15:33:32,573   exec(compile(setup_py_code, filename, "exec"))
2023-09-10T15:33:32,573   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-mvq43268/hatshufflepy_1eaae3898461475f90197afc36b975b1/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' bdist_wheel -d /tmp/pip-wheel-0cgh90_h[/]
2023-09-10T15:33:32,574   [bold magenta]cwd[/]: /tmp/pip-wheel-mvq43268/hatshufflepy_1eaae3898461475f90197afc36b975b1/
2023-09-10T15:33:32,574   Building wheel for hatshufflepy (setup.py): finished with status 'error'
2023-09-10T15:33:32,575   ERROR: Failed building wheel for hatshufflepy
2023-09-10T15:33:32,577   Running setup.py clean for hatshufflepy
2023-09-10T15:33:32,578   Running command python setup.py clean
2023-09-10T15:33:33,180   /tmp/pip-wheel-mvq43268/hatshufflepy_1eaae3898461475f90197afc36b975b1
2023-09-10T15:33:33,733   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-10T15:33:33,734   !!

2023-09-10T15:33:33,735           ********************************************************************************
2023-09-10T15:33:33,735           Usage of dash-separated 'description-file' will not be supported in future
2023-09-10T15:33:33,736           versions. Please use the underscore name 'description_file' instead.

2023-09-10T15:33:33,737           By 2023-Sep-26, you need to update your project and remove deprecated calls
2023-09-10T15:33:33,738           or your builds will no longer be supported.

2023-09-10T15:33:33,738           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-10T15:33:33,739           ********************************************************************************

2023-09-10T15:33:33,740   !!
2023-09-10T15:33:33,740     opt = self.warn_dash_deprecation(opt, section)
2023-09-10T15:33:34,144   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-10T15:33:34,144   !!

2023-09-10T15:33:34,145           ********************************************************************************
2023-09-10T15:33:34,146           Usage of dash-separated 'description-file' will not be supported in future
2023-09-10T15:33:34,146           versions. Please use the underscore name 'description_file' instead.

2023-09-10T15:33:34,147           By 2023-Sep-26, you need to update your project and remove deprecated calls
2023-09-10T15:33:34,147           or your builds will no longer be supported.

2023-09-10T15:33:34,148           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-10T15:33:34,149           ********************************************************************************

2023-09-10T15:33:34,150   !!
2023-09-10T15:33:34,150     opt = self.warn_dash_deprecation(opt, section)
2023-09-10T15:33:34,183   running clean
2023-09-10T15:33:34,230   removing 'build/temp.linux-armv7l-cpython-311' (and everything under it)
2023-09-10T15:33:34,232   removing 'build/lib.linux-armv7l-cpython-311' (and everything under it)
2023-09-10T15:33:34,233   'build/bdist.linux-armv7l' does not exist -- can't clean it
2023-09-10T15:33:34,234   'build/scripts-3.11' does not exist -- can't clean it
2023-09-10T15:33:34,234   removing 'build'
2023-09-10T15:33:34,381 Failed to build hatshufflepy
2023-09-10T15:33:34,382 ERROR: Failed to build one or more wheels
2023-09-10T15:33:34,384 Exception information:
2023-09-10T15:33:34,384 Traceback (most recent call last):
2023-09-10T15:33:34,384   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-10T15:33:34,384     status = run_func(*args)
2023-09-10T15:33:34,384              ^^^^^^^^^^^^^^^
2023-09-10T15:33:34,384   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-10T15:33:34,384     return func(self, options, args)
2023-09-10T15:33:34,384            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T15:33:34,384   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 181, in run
2023-09-10T15:33:34,384     raise CommandError("Failed to build one or more wheels")
2023-09-10T15:33:34,384 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2023-09-10T15:33:34,387 Removed build tracker: '/tmp/pip-build-tracker-0dyihjo4'