2023-09-10T23:37:32,322 Created temporary directory: /tmp/pip-build-tracker-2kjx4tnz
2023-09-10T23:37:32,323 Initialized build tracking at /tmp/pip-build-tracker-2kjx4tnz
2023-09-10T23:37:32,323 Created build tracker: /tmp/pip-build-tracker-2kjx4tnz
2023-09-10T23:37:32,324 Entered build tracker: /tmp/pip-build-tracker-2kjx4tnz
2023-09-10T23:37:32,324 Created temporary directory: /tmp/pip-wheel-2zwlnzf_
2023-09-10T23:37:32,328 Created temporary directory: /tmp/pip-ephem-wheel-cache-hty0_vp6
2023-09-10T23:37:32,349 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-10T23:37:32,353 2 location(s) to search for versions of ssw-aligner:
2023-09-10T23:37:32,353 * https://pypi.org/simple/ssw-aligner/
2023-09-10T23:37:32,353 * https://www.piwheels.org/simple/ssw-aligner/
2023-09-10T23:37:32,353 Fetching project page and analyzing links: https://pypi.org/simple/ssw-aligner/
2023-09-10T23:37:32,354 Getting page https://pypi.org/simple/ssw-aligner/
2023-09-10T23:37:32,356 Found index url https://pypi.org/simple/
2023-09-10T23:37:32,494 Fetched page https://pypi.org/simple/ssw-aligner/ as application/vnd.pypi.simple.v1+json
2023-09-10T23:37:32,497   Found link https://files.pythonhosted.org/packages/26/c5/d6d45f897bcaabc6413b3eba32aceb83da292e4837d172fd478e679326ae/ssw_aligner-0.0.0.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.0
2023-09-10T23:37:32,497   Found link https://files.pythonhosted.org/packages/db/90/df5f1864262c4dfdca23700b93fd6f12e7525d050c2e3a059f756ce3cb5c/ssw_aligner-0.0.1.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.1
2023-09-10T23:37:32,498   Found link https://files.pythonhosted.org/packages/00/40/c2aee762db470efb345706da1fdafcba22fa9458f702f5867cbc2a2202f4/ssw_aligner-0.0.2.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.2
2023-09-10T23:37:32,499   Found link https://files.pythonhosted.org/packages/07/28/37a2fbf4b0bc91cc3d441524aec94dc8bb7a4f62fea679a6c25dbd3235c5/ssw_aligner-0.0.3.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.3
2023-09-10T23:37:32,499   Found link https://files.pythonhosted.org/packages/5c/c9/1b596cea0939fcde6549b0be70518b7bad3d23335006c5641438b3605813/ssw_aligner-0.0.4.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.4
2023-09-10T23:37:32,500   Found link https://files.pythonhosted.org/packages/96/3b/1fda982e7c2264d8164fd3cacd82a1a00de575a1eff68b3f86c578af2a7b/ssw_aligner-0.0.5.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.5
2023-09-10T23:37:32,501   Found link https://files.pythonhosted.org/packages/fe/60/131861d0d4250f27a65db140a09f8a208e5db084135ddbe7c7c580b45add/ssw_aligner-0.0.6.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.6
2023-09-10T23:37:32,502   Found link https://files.pythonhosted.org/packages/09/33/a6ec7a29e0c5112a4626e82de22f1d3041a9848deeedb0eb10b29f955fd0/ssw_aligner-0.0.7.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.7
2023-09-10T23:37:32,502   Found link https://files.pythonhosted.org/packages/77/9a/73d8f071e78956c30e012c3fc5f9735a0e28426dad0cb6fd534e26cdd7db/ssw_aligner-0.0.8.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.8
2023-09-10T23:37:32,503 Fetching project page and analyzing links: https://www.piwheels.org/simple/ssw-aligner/
2023-09-10T23:37:32,504 Getting page https://www.piwheels.org/simple/ssw-aligner/
2023-09-10T23:37:32,505 Found index url https://www.piwheels.org/simple/
2023-09-10T23:37:32,776 Fetched page https://www.piwheels.org/simple/ssw-aligner/ as text/html
2023-09-10T23:37:32,777 Skipping link: not a file: https://www.piwheels.org/simple/ssw-aligner/
2023-09-10T23:37:32,778 Skipping link: not a file: https://pypi.org/simple/ssw-aligner/
2023-09-10T23:37:32,797 Given no hashes to check 1 links for project 'ssw-aligner': discarding no candidates
2023-09-10T23:37:32,815 Collecting ssw-aligner==0.0.4
2023-09-10T23:37:32,817   Created temporary directory: /tmp/pip-unpack-q9scduek
2023-09-10T23:37:33,028   Downloading ssw_aligner-0.0.4.tar.gz (103 kB)
2023-09-10T23:37:33,139   Added ssw-aligner==0.0.4 from https://files.pythonhosted.org/packages/5c/c9/1b596cea0939fcde6549b0be70518b7bad3d23335006c5641438b3605813/ssw_aligner-0.0.4.tar.gz to build tracker '/tmp/pip-build-tracker-2kjx4tnz'
2023-09-10T23:37:33,141   Running setup.py (path:/tmp/pip-wheel-2zwlnzf_/ssw-aligner_99347fd2b2b74925bdc70a1ddf9f68b8/setup.py) egg_info for package ssw-aligner
2023-09-10T23:37:33,142   Created temporary directory: /tmp/pip-pip-egg-info-mlq4vxse
2023-09-10T23:37:33,142   Preparing metadata (setup.py): started
2023-09-10T23:37:33,144   Running command python setup.py egg_info
2023-09-10T23:37:33,574   Traceback (most recent call last):
2023-09-10T23:37:33,574     File "/usr/local/lib/python3.11/dist-packages/numpy/core/__init__.py", line 23, in <module>
2023-09-10T23:37:33,575       from . import multiarray
2023-09-10T23:37:33,575     File "/usr/local/lib/python3.11/dist-packages/numpy/core/multiarray.py", line 10, in <module>
2023-09-10T23:37:33,576       from . import overrides
2023-09-10T23:37:33,576     File "/usr/local/lib/python3.11/dist-packages/numpy/core/overrides.py", line 8, in <module>
2023-09-10T23:37:33,577       from numpy.core._multiarray_umath import (
2023-09-10T23:37:33,577   ImportError: libopenblas.so.0: cannot open shared object file: No such file or directory

2023-09-10T23:37:33,579   During handling of the above exception, another exception occurred:

2023-09-10T23:37:33,581   Traceback (most recent call last):
2023-09-10T23:37:33,582     File "<string>", line 2, in <module>
2023-09-10T23:37:33,582     File "<pip-setuptools-caller>", line 34, in <module>
2023-09-10T23:37:33,583     File "/tmp/pip-wheel-2zwlnzf_/ssw-aligner_99347fd2b2b74925bdc70a1ddf9f68b8/setup.py", line 4, in <module>
2023-09-10T23:37:33,584       import numpy as np
2023-09-10T23:37:33,585     File "/usr/local/lib/python3.11/dist-packages/numpy/__init__.py", line 139, in <module>
2023-09-10T23:37:33,586       from . import core
2023-09-10T23:37:33,586     File "/usr/local/lib/python3.11/dist-packages/numpy/core/__init__.py", line 49, in <module>
2023-09-10T23:37:33,587       raise ImportError(msg)
2023-09-10T23:37:33,588   ImportError:

2023-09-10T23:37:33,590   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!

2023-09-10T23:37:33,592   Importing the numpy C-extensions failed. This error can happen for
2023-09-10T23:37:33,593   many reasons, often due to issues with your setup or how NumPy was
2023-09-10T23:37:33,594   installed.

2023-09-10T23:37:33,596   We have compiled some common reasons and troubleshooting tips at:

2023-09-10T23:37:33,598       https://numpy.org/devdocs/user/troubleshooting-importerror.html

2023-09-10T23:37:33,600   Please note and check the following:

2023-09-10T23:37:33,602     * The Python version is: Python3.11 from "/usr/bin/python3"
2023-09-10T23:37:33,603     * The NumPy version is: "1.25.2"

2023-09-10T23:37:33,605   and make sure that they are the versions you expect.
2023-09-10T23:37:33,605   Please carefully study the documentation linked above for further help.

2023-09-10T23:37:33,607   Original error was: libopenblas.so.0: cannot open shared object file: No such file or directory

2023-09-10T23:37:33,652   ERROR: [present-rich] python setup.py egg_info exited with 1
2023-09-10T23:37:33,665   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2023-09-10T23:37:33,665   exec(compile('"'"''"'"''"'"'
2023-09-10T23:37:33,665   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-10T23:37:33,665   #
2023-09-10T23:37:33,665   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-10T23:37:33,665   #   import from `distutils.core` to work with newer packaging standards.
2023-09-10T23:37:33,665   # - It provides a clear error message when setuptools is not installed.
2023-09-10T23:37:33,665   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-10T23:37:33,665   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-10T23:37:33,665   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-10T23:37:33,665   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-10T23:37:33,665   import os, sys, tokenize
2023-09-10T23:37:33,665   
2023-09-10T23:37:33,665   try:
2023-09-10T23:37:33,665       import setuptools
2023-09-10T23:37:33,665   except ImportError as error:
2023-09-10T23:37:33,665       print(
2023-09-10T23:37:33,665           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-10T23:37:33,665           "the build environment.",
2023-09-10T23:37:33,665           file=sys.stderr,
2023-09-10T23:37:33,665       )
2023-09-10T23:37:33,665       sys.exit(1)
2023-09-10T23:37:33,665   
2023-09-10T23:37:33,665   __file__ = %r
2023-09-10T23:37:33,665   sys.argv[0] = __file__
2023-09-10T23:37:33,665   
2023-09-10T23:37:33,665   if os.path.exists(__file__):
2023-09-10T23:37:33,665       filename = __file__
2023-09-10T23:37:33,665       with tokenize.open(__file__) as f:
2023-09-10T23:37:33,665           setup_py_code = f.read()
2023-09-10T23:37:33,665   else:
2023-09-10T23:37:33,665       filename = "<auto-generated setuptools caller>"
2023-09-10T23:37:33,665       setup_py_code = "from setuptools import setup; setup()"
2023-09-10T23:37:33,665   
2023-09-10T23:37:33,665   exec(compile(setup_py_code, filename, "exec"))
2023-09-10T23:37:33,665   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-2zwlnzf_/ssw-aligner_99347fd2b2b74925bdc70a1ddf9f68b8/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-mlq4vxse[/]
2023-09-10T23:37:33,665   [bold magenta]cwd[/]: /tmp/pip-wheel-2zwlnzf_/ssw-aligner_99347fd2b2b74925bdc70a1ddf9f68b8/
2023-09-10T23:37:33,666   Preparing metadata (setup.py): finished with status 'error'
2023-09-10T23:37:33,668 ERROR: [present-rich] metadata generation failed
2023-09-10T23:37:33,673 Exception information:
2023-09-10T23:37:33,673 Traceback (most recent call last):
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2023-09-10T23:37:33,673     call_subprocess(
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2023-09-10T23:37:33,673     raise error
2023-09-10T23:37:33,673 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2023-09-10T23:37:33,673 
2023-09-10T23:37:33,673 The above exception was the direct cause of the following exception:
2023-09-10T23:37:33,673 
2023-09-10T23:37:33,673 Traceback (most recent call last):
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-10T23:37:33,673     status = run_func(*args)
2023-09-10T23:37:33,673              ^^^^^^^^^^^^^^^
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-10T23:37:33,673     return func(self, options, args)
2023-09-10T23:37:33,673            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2023-09-10T23:37:33,673     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2023-09-10T23:37:33,673                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve
2023-09-10T23:37:33,673     result = self._result = resolver.resolve(
2023-09-10T23:37:33,673                             ^^^^^^^^^^^^^^^^^
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2023-09-10T23:37:33,673     state = resolution.resolve(requirements, max_rounds=max_rounds)
2023-09-10T23:37:33,673             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2023-09-10T23:37:33,673     self._add_to_criteria(self.state.criteria, r, parent=None)
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2023-09-10T23:37:33,673     if not criterion.candidates:
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2023-09-10T23:37:33,673     return bool(self._sequence)
2023-09-10T23:37:33,673            ^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2023-09-10T23:37:33,673     return any(self)
2023-09-10T23:37:33,673            ^^^^^^^^^
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2023-09-10T23:37:33,673     return (c for c in iterator if id(c) not in self._incompatible_ids)
2023-09-10T23:37:33,673            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2023-09-10T23:37:33,673     candidate = func()
2023-09-10T23:37:33,673                 ^^^^^^
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link
2023-09-10T23:37:33,673     self._link_candidate_cache[link] = LinkCandidate(
2023-09-10T23:37:33,673                                        ^^^^^^^^^^^^^^
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__
2023-09-10T23:37:33,673     super().__init__(
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
2023-09-10T23:37:33,673     self.dist = self._prepare()
2023-09-10T23:37:33,673                 ^^^^^^^^^^^^^^^
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare
2023-09-10T23:37:33,673     dist = self._prepare_distribution()
2023-09-10T23:37:33,673            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution
2023-09-10T23:37:33,673     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2023-09-10T23:37:33,673            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement
2023-09-10T23:37:33,673     return self._prepare_linked_requirement(req, parallel_builds)
2023-09-10T23:37:33,673            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement
2023-09-10T23:37:33,673     dist = _get_prepared_distribution(
2023-09-10T23:37:33,673            ^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution
2023-09-10T23:37:33,673     abstract_dist.prepare_distribution_metadata(
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata
2023-09-10T23:37:33,673     self.req.prepare_metadata()
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata
2023-09-10T23:37:33,673     self.metadata_directory = generate_metadata_legacy(
2023-09-10T23:37:33,673                               ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:33,673   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2023-09-10T23:37:33,673     raise MetadataGenerationFailed(package_details=details) from error
2023-09-10T23:37:33,673 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2023-09-10T23:37:33,686 Removed ssw-aligner==0.0.4 from https://files.pythonhosted.org/packages/5c/c9/1b596cea0939fcde6549b0be70518b7bad3d23335006c5641438b3605813/ssw_aligner-0.0.4.tar.gz from build tracker '/tmp/pip-build-tracker-2kjx4tnz'
2023-09-10T23:37:33,687 Removed build tracker: '/tmp/pip-build-tracker-2kjx4tnz'