2023-09-10T23:37:32,689 Created temporary directory: /tmp/pip-build-tracker-6aw06rji
2023-09-10T23:37:32,690 Initialized build tracking at /tmp/pip-build-tracker-6aw06rji
2023-09-10T23:37:32,691 Created build tracker: /tmp/pip-build-tracker-6aw06rji
2023-09-10T23:37:32,691 Entered build tracker: /tmp/pip-build-tracker-6aw06rji
2023-09-10T23:37:32,692 Created temporary directory: /tmp/pip-wheel-e6yni27r
2023-09-10T23:37:32,695 Created temporary directory: /tmp/pip-ephem-wheel-cache-vne9r43b
2023-09-10T23:37:32,717 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-10T23:37:32,721 2 location(s) to search for versions of ssw-aligner:
2023-09-10T23:37:32,721 * https://pypi.org/simple/ssw-aligner/
2023-09-10T23:37:32,721 * https://www.piwheels.org/simple/ssw-aligner/
2023-09-10T23:37:32,722 Fetching project page and analyzing links: https://pypi.org/simple/ssw-aligner/
2023-09-10T23:37:32,722 Getting page https://pypi.org/simple/ssw-aligner/
2023-09-10T23:37:32,724 Found index url https://pypi.org/simple/
2023-09-10T23:37:32,864 Fetched page https://pypi.org/simple/ssw-aligner/ as application/vnd.pypi.simple.v1+json
2023-09-10T23:37:32,867   Found link https://files.pythonhosted.org/packages/26/c5/d6d45f897bcaabc6413b3eba32aceb83da292e4837d172fd478e679326ae/ssw_aligner-0.0.0.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.0
2023-09-10T23:37:32,868   Found link https://files.pythonhosted.org/packages/db/90/df5f1864262c4dfdca23700b93fd6f12e7525d050c2e3a059f756ce3cb5c/ssw_aligner-0.0.1.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.1
2023-09-10T23:37:32,869   Found link https://files.pythonhosted.org/packages/00/40/c2aee762db470efb345706da1fdafcba22fa9458f702f5867cbc2a2202f4/ssw_aligner-0.0.2.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.2
2023-09-10T23:37:32,869   Found link https://files.pythonhosted.org/packages/07/28/37a2fbf4b0bc91cc3d441524aec94dc8bb7a4f62fea679a6c25dbd3235c5/ssw_aligner-0.0.3.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.3
2023-09-10T23:37:32,870   Found link https://files.pythonhosted.org/packages/5c/c9/1b596cea0939fcde6549b0be70518b7bad3d23335006c5641438b3605813/ssw_aligner-0.0.4.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.4
2023-09-10T23:37:32,871   Found link https://files.pythonhosted.org/packages/96/3b/1fda982e7c2264d8164fd3cacd82a1a00de575a1eff68b3f86c578af2a7b/ssw_aligner-0.0.5.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.5
2023-09-10T23:37:32,872   Found link https://files.pythonhosted.org/packages/fe/60/131861d0d4250f27a65db140a09f8a208e5db084135ddbe7c7c580b45add/ssw_aligner-0.0.6.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.6
2023-09-10T23:37:32,872   Found link https://files.pythonhosted.org/packages/09/33/a6ec7a29e0c5112a4626e82de22f1d3041a9848deeedb0eb10b29f955fd0/ssw_aligner-0.0.7.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.7
2023-09-10T23:37:32,873   Found link https://files.pythonhosted.org/packages/77/9a/73d8f071e78956c30e012c3fc5f9735a0e28426dad0cb6fd534e26cdd7db/ssw_aligner-0.0.8.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.8
2023-09-10T23:37:32,874 Fetching project page and analyzing links: https://www.piwheels.org/simple/ssw-aligner/
2023-09-10T23:37:32,874 Getting page https://www.piwheels.org/simple/ssw-aligner/
2023-09-10T23:37:32,876 Found index url https://www.piwheels.org/simple/
2023-09-10T23:37:33,126 Fetched page https://www.piwheels.org/simple/ssw-aligner/ as text/html
2023-09-10T23:37:33,127 Skipping link: not a file: https://www.piwheels.org/simple/ssw-aligner/
2023-09-10T23:37:33,128 Skipping link: not a file: https://pypi.org/simple/ssw-aligner/
2023-09-10T23:37:33,147 Given no hashes to check 1 links for project 'ssw-aligner': discarding no candidates
2023-09-10T23:37:33,165 Collecting ssw-aligner==0.0.5
2023-09-10T23:37:33,168   Created temporary directory: /tmp/pip-unpack-1h4vs5pp
2023-09-10T23:37:33,613   Downloading ssw_aligner-0.0.5.tar.gz (103 kB)
2023-09-10T23:37:33,721   Added ssw-aligner==0.0.5 from https://files.pythonhosted.org/packages/96/3b/1fda982e7c2264d8164fd3cacd82a1a00de575a1eff68b3f86c578af2a7b/ssw_aligner-0.0.5.tar.gz to build tracker '/tmp/pip-build-tracker-6aw06rji'
2023-09-10T23:37:33,722   Running setup.py (path:/tmp/pip-wheel-e6yni27r/ssw-aligner_06e71e990b2347a1be2bac25fc4b2793/setup.py) egg_info for package ssw-aligner
2023-09-10T23:37:33,723   Created temporary directory: /tmp/pip-pip-egg-info-m5g24ezo
2023-09-10T23:37:33,724   Preparing metadata (setup.py): started
2023-09-10T23:37:33,725   Running command python setup.py egg_info
2023-09-10T23:37:34,173   Traceback (most recent call last):
2023-09-10T23:37:34,173     File "/usr/local/lib/python3.11/dist-packages/numpy/core/__init__.py", line 23, in <module>
2023-09-10T23:37:34,174       from . import multiarray
2023-09-10T23:37:34,174     File "/usr/local/lib/python3.11/dist-packages/numpy/core/multiarray.py", line 10, in <module>
2023-09-10T23:37:34,175       from . import overrides
2023-09-10T23:37:34,175     File "/usr/local/lib/python3.11/dist-packages/numpy/core/overrides.py", line 8, in <module>
2023-09-10T23:37:34,175       from numpy.core._multiarray_umath import (
2023-09-10T23:37:34,176   ImportError: libopenblas.so.0: cannot open shared object file: No such file or directory

2023-09-10T23:37:34,178   During handling of the above exception, another exception occurred:

2023-09-10T23:37:34,179   Traceback (most recent call last):
2023-09-10T23:37:34,180     File "<string>", line 2, in <module>
2023-09-10T23:37:34,180     File "<pip-setuptools-caller>", line 34, in <module>
2023-09-10T23:37:34,181     File "/tmp/pip-wheel-e6yni27r/ssw-aligner_06e71e990b2347a1be2bac25fc4b2793/setup.py", line 4, in <module>
2023-09-10T23:37:34,182       import numpy as np
2023-09-10T23:37:34,183     File "/usr/local/lib/python3.11/dist-packages/numpy/__init__.py", line 139, in <module>
2023-09-10T23:37:34,184       from . import core
2023-09-10T23:37:34,184     File "/usr/local/lib/python3.11/dist-packages/numpy/core/__init__.py", line 49, in <module>
2023-09-10T23:37:34,185       raise ImportError(msg)
2023-09-10T23:37:34,186   ImportError:

2023-09-10T23:37:34,188   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!

2023-09-10T23:37:34,189   Importing the numpy C-extensions failed. This error can happen for
2023-09-10T23:37:34,190   many reasons, often due to issues with your setup or how NumPy was
2023-09-10T23:37:34,191   installed.

2023-09-10T23:37:34,193   We have compiled some common reasons and troubleshooting tips at:

2023-09-10T23:37:34,195       https://numpy.org/devdocs/user/troubleshooting-importerror.html

2023-09-10T23:37:34,197   Please note and check the following:

2023-09-10T23:37:34,198     * The Python version is: Python3.11 from "/usr/bin/python3"
2023-09-10T23:37:34,199     * The NumPy version is: "1.25.2"

2023-09-10T23:37:34,201   and make sure that they are the versions you expect.
2023-09-10T23:37:34,202   Please carefully study the documentation linked above for further help.

2023-09-10T23:37:34,203   Original error was: libopenblas.so.0: cannot open shared object file: No such file or directory

2023-09-10T23:37:34,250   ERROR: [present-rich] python setup.py egg_info exited with 1
2023-09-10T23:37:34,263   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2023-09-10T23:37:34,263   exec(compile('"'"''"'"''"'"'
2023-09-10T23:37:34,263   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-10T23:37:34,263   #
2023-09-10T23:37:34,263   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-10T23:37:34,263   #   import from `distutils.core` to work with newer packaging standards.
2023-09-10T23:37:34,263   # - It provides a clear error message when setuptools is not installed.
2023-09-10T23:37:34,263   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-10T23:37:34,263   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-10T23:37:34,263   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-10T23:37:34,263   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-10T23:37:34,263   import os, sys, tokenize
2023-09-10T23:37:34,263   
2023-09-10T23:37:34,263   try:
2023-09-10T23:37:34,263       import setuptools
2023-09-10T23:37:34,263   except ImportError as error:
2023-09-10T23:37:34,263       print(
2023-09-10T23:37:34,263           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-10T23:37:34,263           "the build environment.",
2023-09-10T23:37:34,263           file=sys.stderr,
2023-09-10T23:37:34,263       )
2023-09-10T23:37:34,263       sys.exit(1)
2023-09-10T23:37:34,263   
2023-09-10T23:37:34,263   __file__ = %r
2023-09-10T23:37:34,263   sys.argv[0] = __file__
2023-09-10T23:37:34,263   
2023-09-10T23:37:34,263   if os.path.exists(__file__):
2023-09-10T23:37:34,263       filename = __file__
2023-09-10T23:37:34,263       with tokenize.open(__file__) as f:
2023-09-10T23:37:34,263           setup_py_code = f.read()
2023-09-10T23:37:34,263   else:
2023-09-10T23:37:34,263       filename = "<auto-generated setuptools caller>"
2023-09-10T23:37:34,263       setup_py_code = "from setuptools import setup; setup()"
2023-09-10T23:37:34,263   
2023-09-10T23:37:34,263   exec(compile(setup_py_code, filename, "exec"))
2023-09-10T23:37:34,263   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-e6yni27r/ssw-aligner_06e71e990b2347a1be2bac25fc4b2793/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-m5g24ezo[/]
2023-09-10T23:37:34,264   [bold magenta]cwd[/]: /tmp/pip-wheel-e6yni27r/ssw-aligner_06e71e990b2347a1be2bac25fc4b2793/
2023-09-10T23:37:34,265   Preparing metadata (setup.py): finished with status 'error'
2023-09-10T23:37:34,266 ERROR: [present-rich] metadata generation failed
2023-09-10T23:37:34,272 Exception information:
2023-09-10T23:37:34,272 Traceback (most recent call last):
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2023-09-10T23:37:34,272     call_subprocess(
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2023-09-10T23:37:34,272     raise error
2023-09-10T23:37:34,272 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2023-09-10T23:37:34,272 
2023-09-10T23:37:34,272 The above exception was the direct cause of the following exception:
2023-09-10T23:37:34,272 
2023-09-10T23:37:34,272 Traceback (most recent call last):
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-10T23:37:34,272     status = run_func(*args)
2023-09-10T23:37:34,272              ^^^^^^^^^^^^^^^
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-10T23:37:34,272     return func(self, options, args)
2023-09-10T23:37:34,272            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2023-09-10T23:37:34,272     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2023-09-10T23:37:34,272                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve
2023-09-10T23:37:34,272     result = self._result = resolver.resolve(
2023-09-10T23:37:34,272                             ^^^^^^^^^^^^^^^^^
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2023-09-10T23:37:34,272     state = resolution.resolve(requirements, max_rounds=max_rounds)
2023-09-10T23:37:34,272             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2023-09-10T23:37:34,272     self._add_to_criteria(self.state.criteria, r, parent=None)
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2023-09-10T23:37:34,272     if not criterion.candidates:
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2023-09-10T23:37:34,272     return bool(self._sequence)
2023-09-10T23:37:34,272            ^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2023-09-10T23:37:34,272     return any(self)
2023-09-10T23:37:34,272            ^^^^^^^^^
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2023-09-10T23:37:34,272     return (c for c in iterator if id(c) not in self._incompatible_ids)
2023-09-10T23:37:34,272            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2023-09-10T23:37:34,272     candidate = func()
2023-09-10T23:37:34,272                 ^^^^^^
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link
2023-09-10T23:37:34,272     self._link_candidate_cache[link] = LinkCandidate(
2023-09-10T23:37:34,272                                        ^^^^^^^^^^^^^^
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__
2023-09-10T23:37:34,272     super().__init__(
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
2023-09-10T23:37:34,272     self.dist = self._prepare()
2023-09-10T23:37:34,272                 ^^^^^^^^^^^^^^^
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare
2023-09-10T23:37:34,272     dist = self._prepare_distribution()
2023-09-10T23:37:34,272            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution
2023-09-10T23:37:34,272     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2023-09-10T23:37:34,272            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement
2023-09-10T23:37:34,272     return self._prepare_linked_requirement(req, parallel_builds)
2023-09-10T23:37:34,272            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement
2023-09-10T23:37:34,272     dist = _get_prepared_distribution(
2023-09-10T23:37:34,272            ^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution
2023-09-10T23:37:34,272     abstract_dist.prepare_distribution_metadata(
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata
2023-09-10T23:37:34,272     self.req.prepare_metadata()
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata
2023-09-10T23:37:34,272     self.metadata_directory = generate_metadata_legacy(
2023-09-10T23:37:34,272                               ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-10T23:37:34,272   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2023-09-10T23:37:34,272     raise MetadataGenerationFailed(package_details=details) from error
2023-09-10T23:37:34,272 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2023-09-10T23:37:34,284 Removed ssw-aligner==0.0.5 from https://files.pythonhosted.org/packages/96/3b/1fda982e7c2264d8164fd3cacd82a1a00de575a1eff68b3f86c578af2a7b/ssw_aligner-0.0.5.tar.gz from build tracker '/tmp/pip-build-tracker-6aw06rji'
2023-09-10T23:37:34,285 Removed build tracker: '/tmp/pip-build-tracker-6aw06rji'