2023-09-11T02:11:11,833 Created temporary directory: /tmp/pip-build-tracker-ci5lgo31 2023-09-11T02:11:11,835 Initialized build tracking at /tmp/pip-build-tracker-ci5lgo31 2023-09-11T02:11:11,835 Created build tracker: /tmp/pip-build-tracker-ci5lgo31 2023-09-11T02:11:11,835 Entered build tracker: /tmp/pip-build-tracker-ci5lgo31 2023-09-11T02:11:11,836 Created temporary directory: /tmp/pip-wheel-7962mfpx 2023-09-11T02:11:11,839 Created temporary directory: /tmp/pip-ephem-wheel-cache-ewmsyost 2023-09-11T02:11:11,861 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-11T02:11:11,865 2 location(s) to search for versions of gimmemotifs: 2023-09-11T02:11:11,865 * https://pypi.org/simple/gimmemotifs/ 2023-09-11T02:11:11,865 * https://www.piwheels.org/simple/gimmemotifs/ 2023-09-11T02:11:11,865 Fetching project page and analyzing links: https://pypi.org/simple/gimmemotifs/ 2023-09-11T02:11:11,866 Getting page https://pypi.org/simple/gimmemotifs/ 2023-09-11T02:11:11,868 Found index url https://pypi.org/simple/ 2023-09-11T02:11:12,084 Fetched page https://pypi.org/simple/gimmemotifs/ as application/vnd.pypi.simple.v1+json 2023-09-11T02:11:12,090 Found link https://files.pythonhosted.org/packages/3b/66/216440ec9d7e3c075bd26b6ab13132bcebb42fc2dd20a8886a6bec347976/gimmemotifs-0.8.9.1.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.8.9.1 2023-09-11T02:11:12,090 Found link https://files.pythonhosted.org/packages/9a/64/35a8f9fdbf3d212a5a4a797bf862df63a3b53e1858b1d18480a4f7cfe1e6/gimmemotifs-0.9.0.2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.9.0.2 2023-09-11T02:11:12,091 Found link https://files.pythonhosted.org/packages/65/94/7402fe33e86c472e392ac203838c4e6d2c07a3dc421998d5e1c38dbcdcac/gimmemotifs-0.9.0.3.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.9.0.3 2023-09-11T02:11:12,092 Found link https://files.pythonhosted.org/packages/99/73/fc665e610b200b170a2701ecb2d298b8f51c9792e44e12b47a803ed1cf9e/gimmemotifs-0.10.0b1.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b1 2023-09-11T02:11:12,092 Found link https://files.pythonhosted.org/packages/e5/3a/cd3a48bbd49c2cdf325616da57ebe50b12135a4f60111cc4960573f29524/gimmemotifs-0.10.0b2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b2 2023-09-11T02:11:12,093 Found link https://files.pythonhosted.org/packages/98/be/6fdb2557d262d2dfd365fa8502205c6a1f72cfa8029d0d9c3fdb9420f3ff/gimmemotifs-0.10.0b4.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b4 2023-09-11T02:11:12,094 Found link https://files.pythonhosted.org/packages/d3/83/2ffdbeb78227407f2ac3f4390f27257630709a3653a2c42926b181381f75/gimmemotifs-0.10.0b5.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b5 2023-09-11T02:11:12,094 Found link https://files.pythonhosted.org/packages/90/2c/f9493aeaaf1cf10742d7a7bf251dfbfe4a82d53f5222379b0466ac8cacfe/gimmemotifs-0.10.0b6.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b6 2023-09-11T02:11:12,095 Found link https://files.pythonhosted.org/packages/82/a3/34326512c0e9418729124bf9f5fd5da54a9792d5e99e84fe0653f3c38d2e/gimmemotifs-0.11.0b0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.11.0b0 2023-09-11T02:11:12,096 Found link https://files.pythonhosted.org/packages/6c/b7/f04441424da981f03b69c21f2aa534aa4c6cee7aaea4a5e6b1887116bb08/gimmemotifs-0.11.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.11.0 2023-09-11T02:11:12,096 Found link https://files.pythonhosted.org/packages/e9/c6/6b7e7069dbadc7d14ddab5483ef1c98e7532a3a92d66d89ef5cb59d0ac7a/gimmemotifs-0.11.1.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.11.1 2023-09-11T02:11:12,097 Found link https://files.pythonhosted.org/packages/53/5b/9251735efaf7a76ed7694c03a7a47cc21290f71d3958581a425da4682c47/gimmemotifs-0.12.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.12.0 2023-09-11T02:11:12,098 Found link https://files.pythonhosted.org/packages/66/76/ec3ff69655c4bbb8b606db6f45608125fe91e8568dd5858187f8b1b9379c/gimmemotifs-0.13.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.13.0 2023-09-11T02:11:12,098 Found link https://files.pythonhosted.org/packages/80/e9/84e4a077680c2c6e2baaca829ac660e910014c0aa57cd5dc915564a5a001/gimmemotifs-0.13.1.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.13.1 2023-09-11T02:11:12,099 Found link https://files.pythonhosted.org/packages/24/d1/8505a7798bf8e06f4a0b7a54b51bbcd9c9e5361d0dd1f3a89e78f2784c65/gimmemotifs-0.14.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.14.0 2023-09-11T02:11:12,100 Found link https://files.pythonhosted.org/packages/ef/4c/1a19f42d88f7fb47a1589a0c535a9dff9d75d1317a8a1a099ef0195348f9/gimmemotifs-0.14.2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.14.2 2023-09-11T02:11:12,100 Found link https://files.pythonhosted.org/packages/1a/7d/113454d4ef0e960500067e0e4a0d0ed105318749c2e18f5be6542f22df48/gimmemotifs-0.14.3.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.14.3 2023-09-11T02:11:12,101 Found link https://files.pythonhosted.org/packages/f6/71/681a72802e005601ad8da3b695ada4eea8e56e8bd1f14d42d4d7248a24a4/gimmemotifs-0.14.4.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.14.4 2023-09-11T02:11:12,102 Found link https://files.pythonhosted.org/packages/5f/d9/43302fdb777ca8bad9739d81804644090b25011be4a0d2f99188a8849b40/gimmemotifs-0.15.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.15.0 2023-09-11T02:11:12,102 Found link https://files.pythonhosted.org/packages/de/a5/9a3804dda5730092769519f38a7bc736488cff60cf7c8f0f2f71eeeca3e4/gimmemotifs-0.15.2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.15.2 2023-09-11T02:11:12,103 Found link https://files.pythonhosted.org/packages/0c/bd/11e957138342aef4b2539818d1c548fce634e7b323961cdd9beedba3879c/gimmemotifs-0.15.3.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.15.3 2023-09-11T02:11:12,103 Found link https://files.pythonhosted.org/packages/2b/71/faeeb7d734b4163500ad2e62fc131e66f912a722b7b9f6ad902f3ed62923/gimmemotifs-0.16.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.16.0 2023-09-11T02:11:12,104 Found link https://files.pythonhosted.org/packages/90/56/831b7548562dce57014d87dc9731c4b5ec0747c74ce2dd30966e2e812c5e/gimmemotifs-0.17.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.17.0 2023-09-11T02:11:12,105 Found link https://files.pythonhosted.org/packages/c5/c3/2dbd6363f025cf4b06d938479a9b35dab0ca91e59259b16e0bd6eef8bea0/gimmemotifs-0.17.2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.17.2 2023-09-11T02:11:12,105 Found link https://files.pythonhosted.org/packages/23/b1/31f5061ff2749292af7c70ec4f1c81afd1991ea4a2cb62c4e5235d3f1f1c/gimmemotifs-0.18.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.18.0 2023-09-11T02:11:12,106 Fetching project page and analyzing links: https://www.piwheels.org/simple/gimmemotifs/ 2023-09-11T02:11:12,107 Getting page https://www.piwheels.org/simple/gimmemotifs/ 2023-09-11T02:11:12,108 Found index url https://www.piwheels.org/simple/ 2023-09-11T02:11:12,371 Fetched page https://www.piwheels.org/simple/gimmemotifs/ as text/html 2023-09-11T02:11:12,391 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.18.0-cp39-cp39-linux_armv7l.whl#sha256=c12d64728ba85967129e8944ea53e685487283a4aa9d86599b1d0b154bfafd50 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-11T02:11:12,392 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.18.0-cp39-cp39-linux_armv6l.whl#sha256=c12d64728ba85967129e8944ea53e685487283a4aa9d86599b1d0b154bfafd50 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-11T02:11:12,393 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.18.0-cp37-cp37m-linux_armv7l.whl#sha256=35903bb52ba9b0b924163a78f5da57547ab61e653ae348938391849b6995de96 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-11T02:11:12,393 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.18.0-cp37-cp37m-linux_armv6l.whl#sha256=35903bb52ba9b0b924163a78f5da57547ab61e653ae348938391849b6995de96 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-11T02:11:12,394 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.17.2-cp39-cp39-linux_armv7l.whl#sha256=2830a249b0b24152246ade44a0c4b8410f5cb1284dc415a301331c92cc66cac5 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-11T02:11:12,395 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.17.2-cp39-cp39-linux_armv6l.whl#sha256=2830a249b0b24152246ade44a0c4b8410f5cb1284dc415a301331c92cc66cac5 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-11T02:11:12,395 Skipping link: No binaries permitted for gimmemotifs: 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https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.16.0-cp39-cp39-linux_armv7l.whl#sha256=3bbdd661a2a2499f4b6dae989a20ea228510bc8e1774f5e82c956f1d8bfd10af (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-11T02:11:12,399 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.16.0-cp39-cp39-linux_armv6l.whl#sha256=3bbdd661a2a2499f4b6dae989a20ea228510bc8e1774f5e82c956f1d8bfd10af (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-11T02:11:12,400 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.16.0-cp37-cp37m-linux_armv7l.whl#sha256=18abd284f2b2bb7dadd8fd8d04aee0ae6f6f487512248746b3105b27d3521e42 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-11T02:11:12,400 Skipping link: No binaries permitted for gimmemotifs: 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https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp37-cp37m-linux_armv6l.whl#sha256=4fcf7c241d0be7c3cf6cbf538d027f79dff8c0e74de8dc43c9f2731b04cd5a6a (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-11T02:11:12,436 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp37-cp37m-linux_armv7l.whl#sha256=4fcf7c241d0be7c3cf6cbf538d027f79dff8c0e74de8dc43c9f2731b04cd5a6a (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-11T02:11:12,436 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp35-cp35m-linux_armv6l.whl#sha256=0c4940ef4ea69129a58fbbfdf350ea637b435f2f36e04ddfbc81dd3ac0057a01 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-11T02:11:12,437 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp35-cp35m-linux_armv7l.whl#sha256=0c4940ef4ea69129a58fbbfdf350ea637b435f2f36e04ddfbc81dd3ac0057a01 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-11T02:11:12,437 Skipping link: not a file: https://www.piwheels.org/simple/gimmemotifs/ 2023-09-11T02:11:12,438 Skipping link: not a file: https://pypi.org/simple/gimmemotifs/ 2023-09-11T02:11:12,459 Given no hashes to check 1 links for project 'gimmemotifs': discarding no candidates 2023-09-11T02:11:12,477 Collecting gimmemotifs==0.13.0 2023-09-11T02:11:12,479 Created temporary directory: /tmp/pip-unpack-10uyging 2023-09-11T02:11:12,808 Downloading gimmemotifs-0.13.0.tar.gz (54.4 MB) 2023-09-11T02:11:35,053 Added gimmemotifs==0.13.0 from https://files.pythonhosted.org/packages/66/76/ec3ff69655c4bbb8b606db6f45608125fe91e8568dd5858187f8b1b9379c/gimmemotifs-0.13.0.tar.gz to build tracker '/tmp/pip-build-tracker-ci5lgo31' 2023-09-11T02:11:35,055 Running setup.py (path:/tmp/pip-wheel-7962mfpx/gimmemotifs_fc3172ddfb1a44e891525418c38ef40e/setup.py) egg_info for package gimmemotifs 2023-09-11T02:11:35,056 Created temporary directory: /tmp/pip-pip-egg-info-tmtgpb3r 2023-09-11T02:11:35,056 Preparing metadata (setup.py): started 2023-09-11T02:11:35,058 Running command python setup.py egg_info 2023-09-11T02:11:36,155 running egg_info 2023-09-11T02:11:36,156 creating /tmp/pip-pip-egg-info-tmtgpb3r/gimmemotifs.egg-info 2023-09-11T02:11:36,180 writing /tmp/pip-pip-egg-info-tmtgpb3r/gimmemotifs.egg-info/PKG-INFO 2023-09-11T02:11:36,184 writing dependency_links to /tmp/pip-pip-egg-info-tmtgpb3r/gimmemotifs.egg-info/dependency_links.txt 2023-09-11T02:11:36,186 writing requirements to /tmp/pip-pip-egg-info-tmtgpb3r/gimmemotifs.egg-info/requires.txt 2023-09-11T02:11:36,187 writing top-level names to /tmp/pip-pip-egg-info-tmtgpb3r/gimmemotifs.egg-info/top_level.txt 2023-09-11T02:11:36,188 writing manifest file '/tmp/pip-pip-egg-info-tmtgpb3r/gimmemotifs.egg-info/SOURCES.txt' 2023-09-11T02:11:36,509 reading manifest file '/tmp/pip-pip-egg-info-tmtgpb3r/gimmemotifs.egg-info/SOURCES.txt' 2023-09-11T02:11:36,510 reading manifest template 'MANIFEST.in' 2023-09-11T02:11:37,523 adding license file 'COPYING' 2023-09-11T02:11:37,599 writing manifest file '/tmp/pip-pip-egg-info-tmtgpb3r/gimmemotifs.egg-info/SOURCES.txt' 2023-09-11T02:11:37,709 Preparing metadata (setup.py): finished with status 'done' 2023-09-11T02:11:37,926 Source in /tmp/pip-wheel-7962mfpx/gimmemotifs_fc3172ddfb1a44e891525418c38ef40e has version 0.13.0, which satisfies requirement gimmemotifs==0.13.0 from https://files.pythonhosted.org/packages/66/76/ec3ff69655c4bbb8b606db6f45608125fe91e8568dd5858187f8b1b9379c/gimmemotifs-0.13.0.tar.gz 2023-09-11T02:11:37,927 Removed gimmemotifs==0.13.0 from https://files.pythonhosted.org/packages/66/76/ec3ff69655c4bbb8b606db6f45608125fe91e8568dd5858187f8b1b9379c/gimmemotifs-0.13.0.tar.gz from build tracker '/tmp/pip-build-tracker-ci5lgo31' 2023-09-11T02:11:37,932 Created temporary directory: /tmp/pip-unpack-gwfute2x 2023-09-11T02:11:37,933 Created temporary directory: /tmp/pip-unpack-zxt1jc3e 2023-09-11T02:11:37,956 Building wheels for collected packages: gimmemotifs 2023-09-11T02:11:37,961 Created temporary directory: /tmp/pip-wheel-wanhjnq2 2023-09-11T02:11:37,961 Building wheel for gimmemotifs (setup.py): started 2023-09-11T02:11:37,963 Destination directory: /tmp/pip-wheel-wanhjnq2 2023-09-11T02:11:37,963 Running command python setup.py bdist_wheel 2023-09-11T02:11:39,051 running bdist_wheel 2023-09-11T02:11:39,149 running build 2023-09-11T02:11:39,150 running build_py 2023-09-11T02:11:39,150 creating build 2023-09-11T02:11:39,151 creating build/src 2023-09-11T02:11:39,153 creating build/src/Improbizer 2023-09-11T02:11:39,154 copying src/Improbizer/ameme_i386 -> build/src/Improbizer 2023-09-11T02:11:39,246 copying src/Improbizer/ameme_x86_64 -> build/src/Improbizer 2023-09-11T02:11:39,255 creating build/src/ChIPMunk 2023-09-11T02:11:39,256 copying src/ChIPMunk/chipmunk.jar -> build/src/ChIPMunk 2023-09-11T02:11:39,331 copying src/ChIPMunk/ChIPMunk.sh -> build/src/ChIPMunk 2023-09-11T02:11:39,333 creating build/src/BioProspector 2023-09-11T02:11:39,334 copying src/BioProspector/BioProspector.c -> build/src/BioProspector 2023-09-11T02:11:39,338 copying src/BioProspector/BioProspector -> build/src/BioProspector 2023-09-11T02:11:39,342 copying src/BioProspector/COPYING -> build/src/BioProspector 2023-09-11T02:11:39,344 creating build/src/weblogo 2023-09-11T02:11:39,345 copying src/weblogo/seqlogo -> build/src/weblogo 2023-09-11T02:11:39,347 copying src/weblogo/test.html -> build/src/weblogo 2023-09-11T02:11:39,349 creating build/src/weblogo/release 2023-09-11T02:11:39,350 copying src/weblogo/release/.htaccess -> build/src/weblogo/release 2023-09-11T02:11:39,352 copying src/weblogo/Crooks-2004-GR-WebLogo.pdf -> build/src/weblogo 2023-09-11T02:11:39,356 copying src/weblogo/logo.xml -> build/src/weblogo 2023-09-11T02:11:39,359 copying src/weblogo/.cvsignore -> build/src/weblogo 2023-09-11T02:11:39,360 copying src/weblogo/examples.html -> build/src/weblogo 2023-09-11T02:11:39,364 creating build/src/weblogo/img 2023-09-11T02:11:39,365 copying src/weblogo/img/weblogo-fig1.png -> build/src/weblogo/img 2023-09-11T02:11:39,368 copying src/weblogo/img/intron-exon.png -> build/src/weblogo/img 2023-09-11T02:11:39,370 copying src/weblogo/img/weblogologo.png -> build/src/weblogo/img 2023-09-11T02:11:39,372 copying src/weblogo/img/hth.png -> build/src/weblogo/img 2023-09-11T02:11:39,374 copying src/weblogo/img/ecoli10.png -> build/src/weblogo/img 2023-09-11T02:11:39,377 copying src/weblogo/img/info.gif -> build/src/weblogo/img 2023-09-11T02:11:39,378 copying src/weblogo/img/lexA.png -> build/src/weblogo/img 2023-09-11T02:11:39,380 copying src/weblogo/img/cap_hth.png -> build/src/weblogo/img 2023-09-11T02:11:39,382 copying src/weblogo/img/argR.png -> build/src/weblogo/img 2023-09-11T02:11:39,384 copying src/weblogo/img/prenyl.png -> build/src/weblogo/img 2023-09-11T02:11:39,386 copying src/weblogo/img/cap_dna.png -> build/src/weblogo/img 2023-09-11T02:11:39,388 copying src/weblogo/img/exon-intron.png -> build/src/weblogo/img 2023-09-11T02:11:39,390 copying src/weblogo/img/hns.png -> build/src/weblogo/img 2023-09-11T02:11:39,392 copying src/weblogo/img/dnaA.png -> build/src/weblogo/img 2023-09-11T02:11:39,394 copying src/weblogo/img/crp_dna.png -> build/src/weblogo/img 2023-09-11T02:11:39,396 copying src/weblogo/img/globins.png -> build/src/weblogo/img 2023-09-11T02:11:39,398 copying src/weblogo/img/ecoli35.png -> build/src/weblogo/img 2023-09-11T02:11:39,400 copying src/weblogo/index.html -> build/src/weblogo 2023-09-11T02:11:39,402 copying src/weblogo/logo.cgi -> build/src/weblogo 2023-09-11T02:11:39,405 creating build/src/weblogo/cache 2023-09-11T02:11:39,405 copying src/weblogo/cache/.cvsignore -> build/src/weblogo/cache 2023-09-11T02:11:39,407 copying src/weblogo/cache/.htaccess -> build/src/weblogo/cache 2023-09-11T02:11:39,409 copying src/weblogo/cache/notes -> build/src/weblogo/cache 2023-09-11T02:11:39,410 copying src/weblogo/logo.css -> build/src/weblogo 2023-09-11T02:11:39,412 copying src/weblogo/template.pm -> build/src/weblogo 2023-09-11T02:11:39,415 copying src/weblogo/logo.pm -> build/src/weblogo 2023-09-11T02:11:39,417 copying src/weblogo/globin.fasta -> build/src/weblogo 2023-09-11T02:11:39,419 copying src/weblogo/.htaccess -> build/src/weblogo 2023-09-11T02:11:39,421 copying src/weblogo/info.html -> build/src/weblogo 2023-09-11T02:11:39,423 copying src/weblogo/clustal.dat -> build/src/weblogo 2023-09-11T02:11:39,426 copying src/weblogo/logo.conf.init -> build/src/weblogo 2023-09-11T02:11:39,427 copying src/weblogo/template.eps -> build/src/weblogo 2023-09-11T02:11:39,430 copying src/weblogo/README -> build/src/weblogo 2023-09-11T02:11:39,432 copying src/weblogo/LICENSE -> build/src/weblogo 2023-09-11T02:11:39,434 creating build/src/HMS 2023-09-11T02:11:39,435 copying src/HMS/theta1.txt -> build/src/HMS 2023-09-11T02:11:39,437 copying src/HMS/hms -> build/src/HMS 2023-09-11T02:11:39,440 copying src/HMS/theta0.txt -> build/src/HMS 2023-09-11T02:11:39,442 copying src/HMS/theta3.txt -> build/src/HMS 2023-09-11T02:11:39,444 copying src/HMS/theta2.txt -> build/src/HMS 2023-09-11T02:11:39,446 creating build/src/meme_4.6.0 2023-09-11T02:11:39,447 copying src/meme_4.6.0/config.h.in -> build/src/meme_4.6.0 2023-09-11T02:11:39,449 copying src/meme_4.6.0/config.status -> build/src/meme_4.6.0 2023-09-11T02:11:39,452 copying src/meme_4.6.0/config.log -> build/src/meme_4.6.0 2023-09-11T02:11:39,455 copying src/meme_4.6.0/Makefile.am -> build/src/meme_4.6.0 2023-09-11T02:11:39,457 copying src/meme_4.6.0/AUTHORS -> build/src/meme_4.6.0 2023-09-11T02:11:39,459 copying src/meme_4.6.0/libtool -> build/src/meme_4.6.0 2023-09-11T02:11:39,464 copying src/meme_4.6.0/configure -> build/src/meme_4.6.0 2023-09-11T02:11:39,485 creating build/src/meme_4.6.0/src 2023-09-11T02:11:39,486 copying src/meme_4.6.0/src/meme_bin-dpalign.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,488 copying src/meme_4.6.0/src/mhmms-mhmms.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,492 copying src/meme_4.6.0/src/glam2-glam2_alphabet.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,494 copying src/meme_4.6.0/src/mast-util.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,497 copying src/meme_4.6.0/src/motiph-scoring.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,500 copying src/meme_4.6.0/src/libcommon_la-ranksum_test.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,503 copying src/meme_4.6.0/src/spamo-spamo-output.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,505 copying src/meme_4.6.0/src/ureadseq.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,507 copying src/meme_4.6.0/src/xml-out.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,509 copying src/meme_4.6.0/src/glam2-glam2_glam2_aln.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,511 copying src/meme_4.6.0/src/gomo-merger.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,514 copying src/meme_4.6.0/src/readseq -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,517 copying src/meme_4.6.0/src/libcommon_la-string-match.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,519 copying src/meme_4.6.0/src/mtype.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,520 copying src/meme_4.6.0/src/spamo-linked-list.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,522 copying src/meme_4.6.0/src/subst-matrix.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,525 copying src/meme_4.6.0/src/mhmm.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,528 copying src/meme_4.6.0/src/log-hmm.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,530 copying src/meme_4.6.0/src/prior.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,532 copying src/meme_4.6.0/src/shadow -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,563 copying src/meme_4.6.0/src/glam2_scan_args.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,565 copying src/meme_4.6.0/src/libcommon_la-io.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,567 copying src/meme_4.6.0/src/motif_regexp.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,568 copying src/meme_4.6.0/src/clustalw2fasta -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,572 copying src/meme_4.6.0/src/glam2-glam2_dna_prior.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,574 copying src/meme_4.6.0/src/cisml-sax.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,576 copying src/meme_4.6.0/src/fasta_io-fasta-io.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,578 copying src/meme_4.6.0/src/ama -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,612 copying src/meme_4.6.0/src/seq2theta.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,614 copying src/meme_4.6.0/src/glam2_alignment.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,616 copying src/meme_4.6.0/src/simple-getopt.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,618 copying src/meme_4.6.0/src/ame.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,622 copying src/meme_4.6.0/src/projrel.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,623 copying src/meme_4.6.0/src/meme_bin-read_seq_file.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,626 copying src/meme_4.6.0/src/glam2_recode3_20comp.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,628 copying src/meme_4.6.0/src/libcommon_la-tree.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,631 copying src/meme_4.6.0/src/glam2format-glam2_util.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,634 copying src/meme_4.6.0/src/beadstring-xml.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,635 copying src/meme_4.6.0/src/glam2_version.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,637 copying src/meme_4.6.0/src/fimo-fimo.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,640 copying src/meme_4.6.0/src/libcommon_la-motiph-scoring.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,641 copying src/meme_4.6.0/src/motiph-motiph.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,644 copying src/meme_4.6.0/src/libcommon_la-empirical-qvalue.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,646 copying src/meme_4.6.0/src/seq.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,648 copying src/meme_4.6.0/src/object-list.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,650 copying src/meme_4.6.0/src/build-hmm.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,653 copying src/meme_4.6.0/src/libcommon_la-utils.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,656 copying src/meme_4.6.0/src/libcommon_la-string-list.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,660 copying src/meme_4.6.0/src/hash_table_string.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,662 copying src/meme_4.6.0/src/glam2_scan_args.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,664 copying src/meme_4.6.0/src/calculate_p_y.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,666 copying src/meme_4.6.0/src/ceqlogo.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,669 copying src/meme_4.6.0/src/motiph -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,707 copying src/meme_4.6.0/src/libcommon_la-red-black-tree.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,709 copying src/meme_4.6.0/src/qvalue.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,712 copying src/meme_4.6.0/src/spamo-spamo-matches.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,714 copying src/meme_4.6.0/src/libcommon_la-clustalw-io.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,716 copying src/meme_4.6.0/src/libcommon_la-pssm-distr.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,718 copying src/meme_4.6.0/src/cisml-sax.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,721 copying src/meme_4.6.0/src/dp.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,723 copying src/meme_4.6.0/src/init.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,727 copying src/meme_4.6.0/src/spamo-cisml.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,729 copying src/meme_4.6.0/src/glam2_heap.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,731 copying src/meme_4.6.0/src/motiph-scoring.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,733 copying src/meme_4.6.0/src/glam2_glam2format.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,735 copying src/meme_4.6.0/src/mhmms.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,738 copying src/meme_4.6.0/src/meme_io-meme-io.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,742 copying src/meme_4.6.0/src/libcommon_la-read_sequence.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,744 copying src/meme_4.6.0/src/pssm-distr.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,746 copying src/meme_4.6.0/src/meme_bin-calculate_p_y.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,748 copying src/meme_4.6.0/src/histogram.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,750 copying src/meme_4.6.0/src/io.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,752 copying src/meme_4.6.0/src/libcommon_la-buffer.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,755 copying src/meme_4.6.0/src/mhmms.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,758 copying src/meme_4.6.0/src/glam2_site_sample.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,761 copying src/meme_4.6.0/src/meme_xml_html-meme-xml-html.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,763 copying src/meme_4.6.0/src/libcommon_la-object-list.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,766 copying src/meme_4.6.0/src/match.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,768 copying src/meme_4.6.0/src/libcommon_la-gendb.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,770 copying src/meme_4.6.0/src/diagram.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,772 copying src/meme_4.6.0/src/libcommon_la-array-list.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,775 copying src/meme_4.6.0/src/metameme.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,777 copying src/meme_4.6.0/src/seed.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,779 copying src/meme_4.6.0/src/reconcile-tree-alignment.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,782 copying src/meme_4.6.0/src/meme_bin-discretize.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,784 copying src/meme_4.6.0/src/binary-search.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,786 copying src/meme_4.6.0/src/libcommon_la-alignment.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,788 copying src/meme_4.6.0/src/meme_bin-psp.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,791 copying src/meme_4.6.0/src/meme_bin-likelihood.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,794 copying src/meme_4.6.0/src/log-hmm.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,796 copying src/meme_4.6.0/src/libcommon_la-heap.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,798 copying src/meme_4.6.0/src/libcommon_la-seq.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,800 copying src/meme_4.6.0/src/libcommon_la-read_sequence.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,803 copying src/meme_4.6.0/src/spamo-output.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,805 copying src/meme_4.6.0/src/libcommon_la-build-hmm.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,807 copying src/meme_4.6.0/src/libcommon_la-fasta-io.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,809 copying src/meme_4.6.0/src/meme.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,812 copying src/meme_4.6.0/src/libcommon_la-meme-io.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,814 copying src/meme_4.6.0/src/glam2mask-glam2_glam2mask.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,817 copying src/meme_4.6.0/src/data-block.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,819 copying src/meme_4.6.0/src/mhmmscan -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,854 copying src/meme_4.6.0/src/hash_table.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,856 copying src/meme_4.6.0/src/meme_bin-verbosity.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,858 copying src/meme_4.6.0/src/utils.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,860 copying src/meme_4.6.0/src/meme-io.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,864 copying src/meme_4.6.0/src/libcommon_la-spearman-rank-correlation.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,866 copying src/meme_4.6.0/src/tomtom.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,867 copying src/meme_4.6.0/src/glam2_util.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,870 copying src/meme_4.6.0/src/libcommon_la-spearman-rank-correlation.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,871 copying src/meme_4.6.0/src/glam2-glam2_args.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,874 copying src/meme_4.6.0/src/meme_bin-display.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,877 copying src/meme_4.6.0/src/clustalw-io.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,879 copying src/meme_4.6.0/src/motif.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,881 copying src/meme_4.6.0/src/ama-ama.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,884 copying src/meme_4.6.0/src/evomodel.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,887 copying src/meme_4.6.0/src/dp.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,889 copying src/meme_4.6.0/src/libcommon_la-xml-util.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,891 copying src/meme_4.6.0/src/mhmm.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,893 copying src/meme_4.6.0/src/meme.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,896 copying src/meme_4.6.0/src/libcommon_la-fisher_exact.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,897 copying src/meme_4.6.0/src/clustalw2fasta-clustalw2fasta.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,900 copying src/meme_4.6.0/src/motifs.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,901 copying src/meme_4.6.0/src/read_sequence.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,905 copying src/meme_4.6.0/src/reconcile_tree_alignment-reconcile-tree-alignment.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,907 copying src/meme_4.6.0/src/matrix.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,911 copying src/meme_4.6.0/src/libcommon_la-string-list.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,913 copying src/meme_4.6.0/src/draw-mhmm -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,961 copying src/meme_4.6.0/src/meme_bin-subseq7.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,965 copying src/meme_4.6.0/src/libcommon_la-clustalw-io.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,968 copying src/meme_4.6.0/src/string-match.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,971 copying src/meme_4.6.0/src/shadow-shadow.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,974 copying src/meme_4.6.0/src/glam2scan-glam2_fasta.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,977 copying src/meme_4.6.0/src/glam2scan-glam2_dirichlet.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,980 copying src/meme_4.6.0/src/Makefile.am -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,983 copying src/meme_4.6.0/src/meme_bin-llr.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,986 copying src/meme_4.6.0/src/message.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,989 copying src/meme_4.6.0/src/libcommon_la-evomodel.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,991 copying src/meme_4.6.0/src/libcommon_la-gendb.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,994 copying src/meme_4.6.0/src/mhmmscan-mhmmscan.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:39,998 copying src/meme_4.6.0/src/libcommon_la-qvalue.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,000 copying src/meme_4.6.0/src/fimo.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,004 copying src/meme_4.6.0/src/scored-sites.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,006 copying src/meme_4.6.0/src/evomodel_with_loss.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,008 copying src/meme_4.6.0/src/partition.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,010 copying src/meme_4.6.0/src/libcommon_la-heap.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,012 copying src/meme_4.6.0/src/glam2scan-glam2_scan_output.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,015 copying src/meme_4.6.0/src/alignment.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,018 creating build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,019 copying src/meme_4.6.0/src/.libs/libcommon_la-ranksum_test.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,022 copying src/meme_4.6.0/src/.libs/libcommon_la-tree.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,025 copying src/meme_4.6.0/src/.libs/libcommon_la-utils.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,028 copying src/meme_4.6.0/src/.libs/libcommon_la-string-list.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,031 copying src/meme_4.6.0/src/.libs/libcommon_la-buffer.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,034 copying src/meme_4.6.0/src/.libs/libcommon_la-object-list.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,037 copying src/meme_4.6.0/src/.libs/libcommon_la-array-list.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,039 copying src/meme_4.6.0/src/.libs/libcommon_la-heap.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,042 copying src/meme_4.6.0/src/.libs/libcommon_la-read_sequence.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,045 copying src/meme_4.6.0/src/.libs/libcommon_la-fasta-io.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,047 copying src/meme_4.6.0/src/.libs/libcommon_la-spearman-rank-correlation.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,050 copying src/meme_4.6.0/src/.libs/libcommon_la-xml-util.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,052 copying src/meme_4.6.0/src/.libs/libcommon_la-clustalw-io.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,055 copying src/meme_4.6.0/src/.libs/libcommon_la-gendb.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,057 copying src/meme_4.6.0/src/.libs/libcommon_la-karlin.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,060 copying src/meme_4.6.0/src/.libs/libcommon_la-order.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,063 copying src/meme_4.6.0/src/.libs/libcommon_la-pssm.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,066 copying src/meme_4.6.0/src/.libs/libcommon_la-prior-dist.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,068 copying src/meme_4.6.0/src/.libs/libcommon_la-qvalue.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,071 copying src/meme_4.6.0/src/.libs/libcommon_la-read-mhmm.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,074 copying src/meme_4.6.0/src/.libs/libcommon_la-evomodel.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,078 copying src/meme_4.6.0/src/.libs/libcommon_la-log-hmm.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,080 copying src/meme_4.6.0/src/.libs/libcommon_la-scored-sites.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,082 copying src/meme_4.6.0/src/.libs/libcommon_la-motif.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,085 copying src/meme_4.6.0/src/.libs/libcommon_la-mast-util.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,088 copying src/meme_4.6.0/src/.libs/libcommon_la-matrix.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,091 copying src/meme_4.6.0/src/.libs/libcommon_la-motif_regexp.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,094 copying src/meme_4.6.0/src/.libs/libcommon_la-build-hmm.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,097 copying src/meme_4.6.0/src/.libs/libcommon_la-alignment.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,100 copying src/meme_4.6.0/src/.libs/libcommon_la-subst-matrix.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,103 copying src/meme_4.6.0/src/.libs/libcommon_la-binary-search.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,105 copying src/meme_4.6.0/src/.libs/libcommon_la-meme-io.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,108 copying src/meme_4.6.0/src/.libs/libcommon_la-reservoir.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,110 copying src/meme_4.6.0/src/.libs/libcommon_la-seq-reader-from-fasta.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,113 copying src/meme_4.6.0/src/.libs/libcommon_la-data-block.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,118 copying src/meme_4.6.0/src/.libs/libcommon_la-array.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,126 copying src/meme_4.6.0/src/.libs/libcommon_la-rdb-matrix.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,129 copying src/meme_4.6.0/src/.libs/libcommon_la-empirical-qvalue.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,131 copying src/meme_4.6.0/src/.libs/libcommon_la-mhmms.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,134 copying src/meme_4.6.0/src/.libs/libcommon_la-ceqlogo.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,138 copying src/meme_4.6.0/src/.libs/libcommon_la-logodds.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,140 copying src/meme_4.6.0/src/.libs/libcommon_la-fitevd.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,143 copying src/meme_4.6.0/src/.libs/libcommon_la-fisher_exact.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,145 copying src/meme_4.6.0/src/.libs/libcommon_la-simple-getopt.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,147 copying src/meme_4.6.0/src/.libs/libcommon_la-motiph-scoring.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,149 copying src/meme_4.6.0/src/.libs/libcommon_la-prior-reader-from-psp.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,152 copying src/meme_4.6.0/src/.libs/libcommon_la-string-match.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,154 copying src/meme_4.6.0/src/.libs/libcommon_la-mhmm.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,156 copying src/meme_4.6.0/src/.libs/libcommon_la-background.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,159 copying src/meme_4.6.0/src/.libs/libcommon_la-seq.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,161 copying src/meme_4.6.0/src/.libs/libcommon_la-pssm-distr.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,163 copying src/meme_4.6.0/src/.libs/libcommon_la-cisml.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,167 copying src/meme_4.6.0/src/.libs/libcommon_la-red-black-tree.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,169 copying src/meme_4.6.0/src/.libs/libcommon_la-match.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,172 copying src/meme_4.6.0/src/.libs/libcommon_la-alphabet.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,174 copying src/meme_4.6.0/src/.libs/libcommon_la-hash_alph.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,176 copying src/meme_4.6.0/src/.libs/libcommon_la-metameme.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,179 copying src/meme_4.6.0/src/.libs/libcommon_la-substmatrix-table.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,180 copying src/meme_4.6.0/src/.libs/libcommon_la-data-block-reader.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,182 copying src/meme_4.6.0/src/.libs/libcommon.a -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,280 copying src/meme_4.6.0/src/.libs/libcommon_la-mhmm-state.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,283 copying src/meme_4.6.0/src/.libs/libcommon_la-io.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,285 copying src/meme_4.6.0/src/.libs/libcommon_la-hash_table.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,287 copying src/meme_4.6.0/src/.libs/libcommon_la-write-mhmm.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,290 copying src/meme_4.6.0/src/.libs/libcommon_la-xml-out.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,292 copying src/meme_4.6.0/src/.libs/libcommon_la-motifs.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,294 copying src/meme_4.6.0/src/.libs/libcommon_la-regress.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,296 copying src/meme_4.6.0/src/.libs/libcommon_la-dp.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,299 copying src/meme_4.6.0/src/.libs/libcommon_la-evomodel_with_loss.o -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,301 copying src/meme_4.6.0/src/.libs/libcommon.la -> build/src/meme_4.6.0/src/.libs 2023-09-11T02:11:40,303 copying src/meme_4.6.0/src/meta-pssm-distr.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,306 copying src/meme_4.6.0/src/glam2_glam2.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,308 copying src/meme_4.6.0/src/glam2format-glam2_fasta.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,310 copying src/meme_4.6.0/src/libcommon_la-hash_table.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,312 copying src/meme_4.6.0/src/write-mhmm.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,315 copying src/meme_4.6.0/src/prior-reader-from-psp.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,317 copying src/meme_4.6.0/src/readseq.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,320 copying src/meme_4.6.0/src/glam2scan-glam2_motif.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,322 copying src/meme_4.6.0/src/scored-sites.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,325 copying src/meme_4.6.0/src/libcommon_la-background.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,327 copying src/meme_4.6.0/src/glam2scan-glam2_alphabet.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,330 copying src/meme_4.6.0/src/justlike.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,332 copying src/meme_4.6.0/src/readseq-ureadseq.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,336 copying src/meme_4.6.0/src/libcommon_la-karlin.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,338 copying src/meme_4.6.0/src/spamo-cisml-sax.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,341 copying src/meme_4.6.0/src/spamo -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,378 copying src/meme_4.6.0/src/glam2-glam2_fasta.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,380 copying src/meme_4.6.0/src/meme_bin-tcm.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,382 copying src/meme_4.6.0/src/draw_mhmm-read-mhmm.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,385 copying src/meme_4.6.0/src/log_hmm-log-hmm.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,387 copying src/meme_4.6.0/src/linked-list.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,389 copying src/meme_4.6.0/src/general.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,391 copying src/meme_4.6.0/src/libcommon_la-order.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,393 copying src/meme_4.6.0/src/order.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,396 copying src/meme_4.6.0/src/glam2_convolve.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,397 copying src/meme_4.6.0/src/gomo_highlight -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,400 copying src/meme_4.6.0/src/array-list.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,403 copying src/meme_4.6.0/src/alphtype -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,406 copying src/meme_4.6.0/src/glam2_glam2_aln.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,407 copying src/meme_4.6.0/src/write-mhmm.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,410 copying src/meme_4.6.0/src/heap.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,412 copying src/meme_4.6.0/src/meme_bin-prior.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,414 copying src/meme_4.6.0/src/glam2_column_sample.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,416 copying src/meme_4.6.0/src/libcommon_la-pssm.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,419 copying src/meme_4.6.0/src/em.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,421 copying src/meme_4.6.0/src/glam2_init.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,423 copying src/meme_4.6.0/src/fitevd.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,425 copying src/meme_4.6.0/src/remove_alignment_gaps-remove-alignment-gaps.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,427 copying src/meme_4.6.0/src/mast.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,429 copying src/meme_4.6.0/src/glam2_recode3_20comp.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,431 copying src/meme_4.6.0/src/llr.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,432 copying src/meme_4.6.0/src/glam2_site_sample.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,434 copying src/meme_4.6.0/src/meme_bin-meme-print-html.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,436 copying src/meme_4.6.0/src/binary-search.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,438 copying src/meme_4.6.0/src/aa.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:40,440 creating build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,441 copying src/meme_4.6.0/src/libxml2/xmlmemory.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,444 copying src/meme_4.6.0/src/libxml2/libxml2_la-list.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,446 copying src/meme_4.6.0/src/libxml2/libxml2_la-pattern.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,448 copying src/meme_4.6.0/src/libxml2/libxml2_la-xmlunicode.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,450 copying src/meme_4.6.0/src/libxml2/triodef.h -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,452 copying src/meme_4.6.0/src/libxml2/libxml2_la-hash.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,454 creating build/src/meme_4.6.0/src/libxml2/include 2023-09-11T02:11:40,455 copying src/meme_4.6.0/src/libxml2/include/win32config.h -> build/src/meme_4.6.0/src/libxml2/include 2023-09-11T02:11:40,457 copying src/meme_4.6.0/src/libxml2/include/Makefile.am -> build/src/meme_4.6.0/src/libxml2/include 2023-09-11T02:11:40,459 copying src/meme_4.6.0/src/libxml2/include/Makefile.in -> build/src/meme_4.6.0/src/libxml2/include 2023-09-11T02:11:40,461 copying src/meme_4.6.0/src/libxml2/include/wsockcompat.h -> build/src/meme_4.6.0/src/libxml2/include 2023-09-11T02:11:40,463 copying src/meme_4.6.0/src/libxml2/include/Makefile -> build/src/meme_4.6.0/src/libxml2/include 2023-09-11T02:11:40,466 creating build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,467 copying src/meme_4.6.0/src/libxml2/include/libxml/xpath.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,469 copying src/meme_4.6.0/src/libxml2/include/libxml/relaxng.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,471 copying src/meme_4.6.0/src/libxml2/include/libxml/c14n.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,473 copying src/meme_4.6.0/src/libxml2/include/libxml/encoding.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,476 copying src/meme_4.6.0/src/libxml2/include/libxml/chvalid.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,478 copying src/meme_4.6.0/src/libxml2/include/libxml/xmlstring.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,481 copying src/meme_4.6.0/src/libxml2/include/libxml/DOCBparser.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,483 copying src/meme_4.6.0/src/libxml2/include/libxml/uri.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,485 copying src/meme_4.6.0/src/libxml2/include/libxml/Makefile.am -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,486 copying src/meme_4.6.0/src/libxml2/include/libxml/xmlmodule.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,488 copying src/meme_4.6.0/src/libxml2/include/libxml/xlink.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,490 copying src/meme_4.6.0/src/libxml2/include/libxml/Makefile.in -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,493 copying src/meme_4.6.0/src/libxml2/include/libxml/xmlIO.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,495 copying src/meme_4.6.0/src/libxml2/include/libxml/xpointer.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,497 copying src/meme_4.6.0/src/libxml2/include/libxml/pattern.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,499 copying src/meme_4.6.0/src/libxml2/include/libxml/xmlmemory.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,504 copying src/meme_4.6.0/src/libxml2/include/libxml/parser.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,507 copying src/meme_4.6.0/src/libxml2/include/libxml/list.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,509 copying src/meme_4.6.0/src/libxml2/include/libxml/xmlsave.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,511 copying src/meme_4.6.0/src/libxml2/include/libxml/threads.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,513 copying src/meme_4.6.0/src/libxml2/include/libxml/parserInternals.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,515 copying src/meme_4.6.0/src/libxml2/include/libxml/xmlschemas.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,518 copying src/meme_4.6.0/src/libxml2/include/libxml/dict.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,519 copying src/meme_4.6.0/src/libxml2/include/libxml/xmlexports.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,521 copying src/meme_4.6.0/src/libxml2/include/libxml/valid.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,524 copying src/meme_4.6.0/src/libxml2/include/libxml/SAX.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,526 copying src/meme_4.6.0/src/libxml2/include/libxml/HTMLparser.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,528 copying src/meme_4.6.0/src/libxml2/include/libxml/Makefile -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,531 copying src/meme_4.6.0/src/libxml2/include/libxml/xmlwriter.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,533 copying src/meme_4.6.0/src/libxml2/include/libxml/tree.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,536 copying src/meme_4.6.0/src/libxml2/include/libxml/globals.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,539 copying src/meme_4.6.0/src/libxml2/include/libxml/schemasInternals.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,541 copying src/meme_4.6.0/src/libxml2/include/libxml/xmlerror.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,544 copying src/meme_4.6.0/src/libxml2/include/libxml/xmlversion.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,546 copying src/meme_4.6.0/src/libxml2/include/libxml/xinclude.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,548 copying src/meme_4.6.0/src/libxml2/include/libxml/xmlunicode.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,550 copying src/meme_4.6.0/src/libxml2/include/libxml/xmlreader.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,552 copying src/meme_4.6.0/src/libxml2/include/libxml/SAX2.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,554 copying src/meme_4.6.0/src/libxml2/include/libxml/entities.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,556 copying src/meme_4.6.0/src/libxml2/include/libxml/nanohttp.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,558 copying src/meme_4.6.0/src/libxml2/include/libxml/xmlschemastypes.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,560 copying src/meme_4.6.0/src/libxml2/include/libxml/schematron.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,562 copying src/meme_4.6.0/src/libxml2/include/libxml/xpathInternals.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,564 copying src/meme_4.6.0/src/libxml2/include/libxml/xmlversion.h.in -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,567 copying src/meme_4.6.0/src/libxml2/include/libxml/debugXML.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,568 copying src/meme_4.6.0/src/libxml2/include/libxml/nanoftp.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,570 copying src/meme_4.6.0/src/libxml2/include/libxml/xmlautomata.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,573 copying src/meme_4.6.0/src/libxml2/include/libxml/HTMLtree.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,574 copying src/meme_4.6.0/src/libxml2/include/libxml/catalog.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,577 copying src/meme_4.6.0/src/libxml2/include/libxml/hash.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,579 copying src/meme_4.6.0/src/libxml2/include/libxml/xmlregexp.h -> build/src/meme_4.6.0/src/libxml2/include/libxml 2023-09-11T02:11:40,581 copying src/meme_4.6.0/src/libxml2/entities.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,584 copying src/meme_4.6.0/src/libxml2/libxml2_la-HTMLparser.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,585 copying src/meme_4.6.0/src/libxml2/libxml2_la-xmlIO.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,587 copying src/meme_4.6.0/src/libxml2/triostr.h -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,589 copying src/meme_4.6.0/src/libxml2/libxml2_la-xmlIO.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,592 copying src/meme_4.6.0/src/libxml2/libxml2_la-SAX2.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,594 copying src/meme_4.6.0/src/libxml2/xmlschemastypes.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,598 copying src/meme_4.6.0/src/libxml2/HTMLparser.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,603 copying src/meme_4.6.0/src/libxml2/libxml2_la-xmlstring.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,606 copying src/meme_4.6.0/src/libxml2/Makefile.am -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,607 copying src/meme_4.6.0/src/libxml2/libxml2_la-dict.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,610 copying src/meme_4.6.0/src/libxml2/libxml2_la-xmlstring.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,612 copying src/meme_4.6.0/src/libxml2/libxml2_la-xmlreader.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,616 creating build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,617 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-list.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,619 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-hash.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,622 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-xmlIO.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,625 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-xmlstring.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,627 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-dict.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,630 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-xmlreader.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,634 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-threads.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,636 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-parserInternals.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,638 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-xpath.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,644 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-globals.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,646 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-HTMLtree.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,649 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-pattern.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,651 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-chvalid.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,653 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-encoding.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,656 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-xmlunicode.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,659 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-xmlschemastypes.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,663 copying src/meme_4.6.0/src/libxml2/.libs/libxml2.la -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,665 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-debugXML.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,669 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-error.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,672 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-entities.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,674 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-xmlregexp.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,679 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-HTMLparser.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,684 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-parser.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,691 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-tree.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,696 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-valid.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,700 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-SAX2.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,703 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-uri.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,706 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-trionan.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,708 copying src/meme_4.6.0/src/libxml2/.libs/libxml2.a -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,757 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-relaxng.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,762 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-xmlsave.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,766 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-xmlschemas.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,773 copying src/meme_4.6.0/src/libxml2/.libs/libxml2_la-xmlmemory.o -> build/src/meme_4.6.0/src/libxml2/.libs 2023-09-11T02:11:40,775 copying src/meme_4.6.0/src/libxml2/libxml2_la-entities.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,777 copying src/meme_4.6.0/src/libxml2/libxml2_la-threads.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,779 copying src/meme_4.6.0/src/libxml2/Copyright -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,780 copying src/meme_4.6.0/src/libxml2/Makefile.in -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,783 copying src/meme_4.6.0/src/libxml2/libxml2_la-globals.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,785 copying src/meme_4.6.0/src/libxml2/libxml2_la-parserInternals.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,787 copying src/meme_4.6.0/src/libxml2/SAX2.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,791 copying src/meme_4.6.0/src/libxml2/HTMLtree.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,794 copying src/meme_4.6.0/src/libxml2/libxml2_la-xpath.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,799 copying src/meme_4.6.0/src/libxml2/pattern.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,802 copying src/meme_4.6.0/src/libxml2/trio.h -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,804 copying src/meme_4.6.0/src/libxml2/libxml2_la-globals.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,807 copying src/meme_4.6.0/src/libxml2/libxml2_la-HTMLtree.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,810 copying src/meme_4.6.0/src/libxml2/libxml2_la-pattern.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,813 copying src/meme_4.6.0/src/libxml2/libxml2_la-chvalid.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,816 copying src/meme_4.6.0/src/libxml2/libxml2_la-error.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,818 copying src/meme_4.6.0/src/libxml2/libxml2_la-encoding.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,821 copying src/meme_4.6.0/src/libxml2/parserInternals.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,825 copying src/meme_4.6.0/src/libxml2/libxml2_la-xmlunicode.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,829 copying src/meme_4.6.0/src/libxml2/libxml2_la-xmlschemastypes.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,834 copying src/meme_4.6.0/src/libxml2/libxml2_la-chvalid.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,837 copying src/meme_4.6.0/src/libxml2/libxml2_la-xmlschemas.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,839 copying src/meme_4.6.0/src/libxml2/xmlschemas.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,868 copying src/meme_4.6.0/src/libxml2/tree.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,876 copying src/meme_4.6.0/src/libxml2/valid.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,882 copying src/meme_4.6.0/src/libxml2/xpath.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,894 copying src/meme_4.6.0/src/libxml2/list.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,897 copying src/meme_4.6.0/src/libxml2/debugXML.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,902 copying src/meme_4.6.0/src/libxml2/libxml2_la-tree.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,905 copying src/meme_4.6.0/src/libxml2/libxml.h -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,907 copying src/meme_4.6.0/src/libxml2/libxml2_la-encoding.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,909 copying src/meme_4.6.0/src/libxml2/libxml2_la-xpath.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,911 copying src/meme_4.6.0/src/libxml2/xmlstring.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,914 copying src/meme_4.6.0/src/libxml2/libxml2.la -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,916 copying src/meme_4.6.0/src/libxml2/libxml2_la-debugXML.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,922 copying src/meme_4.6.0/src/libxml2/Makefile -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,926 copying src/meme_4.6.0/src/libxml2/libxml2_la-error.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,928 copying src/meme_4.6.0/src/libxml2/libxml2_la-parser.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,931 copying src/meme_4.6.0/src/libxml2/libxml2_la-entities.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,934 copying src/meme_4.6.0/src/libxml2/libxml2_la-xmlregexp.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:40,939 creating build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,941 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-parser.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,943 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-xmlmemory.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,946 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-entities.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,949 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-xmlIO.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,951 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-chvalid.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,954 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-HTMLparser.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,956 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-valid.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,959 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-debugXML.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,962 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-hash.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,964 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-trionan.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,967 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-xmlstring.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,970 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-xmlregexp.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,972 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-xmlschemas.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,975 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-tree.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,978 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-HTMLtree.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,980 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-parserInternals.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,983 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-threads.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,985 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-dict.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,988 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-encoding.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,990 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-xmlreader.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,993 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-list.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,996 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-relaxng.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:40,998 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-SAX2.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:41,001 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-xmlunicode.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:41,003 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-error.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:41,006 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-xpath.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:41,009 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-uri.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:41,011 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-globals.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:41,014 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-xmlschemastypes.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:41,016 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-pattern.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:41,019 copying src/meme_4.6.0/src/libxml2/.deps/libxml2_la-xmlsave.Plo -> build/src/meme_4.6.0/src/libxml2/.deps 2023-09-11T02:11:41,021 copying src/meme_4.6.0/src/libxml2/libxml2_la-xmlmemory.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,023 copying src/meme_4.6.0/src/libxml2/globals.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,026 copying src/meme_4.6.0/src/libxml2/libxml2_la-parserInternals.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,029 copying src/meme_4.6.0/src/libxml2/libxml2_la-debugXML.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,031 copying src/meme_4.6.0/src/libxml2/libxml2_la-HTMLparser.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,038 copying src/meme_4.6.0/src/libxml2/libxml2_la-list.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,040 copying src/meme_4.6.0/src/libxml2/error.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,043 copying src/meme_4.6.0/src/libxml2/xmlsave.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,048 copying src/meme_4.6.0/src/libxml2/elfgcchack.h -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,065 copying src/meme_4.6.0/src/libxml2/libxml2_la-uri.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,067 copying src/meme_4.6.0/src/libxml2/libxml2_la-valid.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,069 copying src/meme_4.6.0/src/libxml2/xmlregexp.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,076 copying src/meme_4.6.0/src/libxml2/libxml2_la-parser.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,081 copying src/meme_4.6.0/src/libxml2/libxml2_la-tree.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,086 copying src/meme_4.6.0/src/libxml2/libxml2_la-valid.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,090 copying src/meme_4.6.0/src/libxml2/libxml2_la-xmlreader.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,092 copying src/meme_4.6.0/src/libxml2/libxml2_la-SAX2.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,095 copying src/meme_4.6.0/src/libxml2/ltmain.sh -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,100 copying src/meme_4.6.0/src/libxml2/triop.h -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,103 copying src/meme_4.6.0/src/libxml2/relaxng.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,110 copying src/meme_4.6.0/src/libxml2/libxml2_la-uri.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,112 copying src/meme_4.6.0/src/libxml2/xmlreader.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,117 copying src/meme_4.6.0/src/libxml2/libxml2_la-xmlschemastypes.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,119 copying src/meme_4.6.0/src/libxml2/trionan.h -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,121 copying src/meme_4.6.0/src/libxml2/uri.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,124 copying src/meme_4.6.0/src/libxml2/libxml2_la-trionan.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,126 copying src/meme_4.6.0/src/libxml2/libxml2_la-trionan.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,128 copying src/meme_4.6.0/src/libxml2/encoding.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,133 copying src/meme_4.6.0/src/libxml2/libxml2_la-xmlsave.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,135 copying src/meme_4.6.0/src/libxml2/libxml2_la-HTMLtree.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,137 copying src/meme_4.6.0/src/libxml2/libxml2_la-relaxng.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,143 copying src/meme_4.6.0/src/libxml2/xmlunicode.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,147 copying src/meme_4.6.0/src/libxml2/xmlIO.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,151 copying src/meme_4.6.0/src/libxml2/threads.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,154 copying src/meme_4.6.0/src/libxml2/libxml2_la-hash.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,156 copying src/meme_4.6.0/src/libxml2/libxml2_la-xmlsave.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,160 copying src/meme_4.6.0/src/libxml2/chvalid.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,163 copying src/meme_4.6.0/src/libxml2/hash.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,165 copying src/meme_4.6.0/src/libxml2/libxml2_la-xmlschemas.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,176 copying src/meme_4.6.0/src/libxml2/dict.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,179 copying src/meme_4.6.0/src/libxml2/libxml2_la-xmlregexp.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,180 copying src/meme_4.6.0/src/libxml2/libxml2_la-threads.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,182 copying src/meme_4.6.0/src/libxml2/libxml2_la-xmlmemory.o -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,185 copying src/meme_4.6.0/src/libxml2/parser.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,192 copying src/meme_4.6.0/src/libxml2/trionan.c -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,195 copying src/meme_4.6.0/src/libxml2/libxml2_la-dict.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,197 copying src/meme_4.6.0/src/libxml2/libxml2_la-relaxng.lo -> build/src/meme_4.6.0/src/libxml2 2023-09-11T02:11:41,198 copying src/meme_4.6.0/src/spearman-rank-correlation.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,200 copying src/meme_4.6.0/src/reduce-alignment -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,204 copying src/meme_4.6.0/src/meme-print-html.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,206 copying src/meme_4.6.0/src/calculate_p_y.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,208 copying src/meme_4.6.0/src/Makefile.in -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,216 copying src/meme_4.6.0/src/libcommon_la-prior-dist.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,218 copying src/meme_4.6.0/src/logs.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,220 copying src/meme_4.6.0/src/ranksum_test.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,223 copying src/meme_4.6.0/src/ama.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,225 copying src/meme_4.6.0/src/strlcpy.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,227 copying src/meme_4.6.0/src/libcommon_la-qvalue.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,229 copying src/meme_4.6.0/src/mp.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,231 copying src/meme_4.6.0/src/glam2mask-glam2_fasta.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,233 copying src/meme_4.6.0/src/libcommon_la-data-block.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,235 copying src/meme_4.6.0/src/display_globals.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,237 copying src/meme_4.6.0/src/mast-mast.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,240 copying src/meme_4.6.0/src/ic.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,242 copying src/meme_4.6.0/src/meme_bin-init.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,245 copying src/meme_4.6.0/src/match.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,247 copying src/meme_4.6.0/src/glam2-glam2_glam2.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,250 copying src/meme_4.6.0/src/glam2_fasta.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,251 copying src/meme_4.6.0/src/libcommon_la-read-mhmm.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,254 copying src/meme_4.6.0/src/draw_mhmm-draw-mhmm.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,256 copying src/meme_4.6.0/src/glam2format -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,259 copying src/meme_4.6.0/src/gomo-linked-list.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,262 copying src/meme_4.6.0/src/libcommon_la-mhmms.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,264 copying src/meme_4.6.0/src/gomo-gomo_highlight.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,266 copying src/meme_4.6.0/src/libcommon_la-evomodel.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,269 copying src/meme_4.6.0/src/libcommon_la-log-hmm.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,271 copying src/meme_4.6.0/src/libcommon_la-scored-sites.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,274 copying src/meme_4.6.0/src/mp.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,275 copying src/meme_4.6.0/src/glam2_fasta.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,278 copying src/meme_4.6.0/src/clustalw2phylip-clustalw2phylip.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,280 copying src/meme_4.6.0/src/heap.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,282 copying src/meme_4.6.0/src/glam2-glam2_init.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,284 copying src/meme_4.6.0/src/glam2-glam2_site_sample.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,287 copying src/meme_4.6.0/src/glam2_dirichlet.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,289 copying src/meme_4.6.0/src/merger.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,290 copying src/meme_4.6.0/src/clustalw2phylip.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,292 copying src/meme_4.6.0/src/xsltproc_lite.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,294 copying src/meme_4.6.0/src/spamo-scan.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,296 copying src/meme_4.6.0/src/glam2-glam2_dirichlet.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,299 copying src/meme_4.6.0/src/fitevd.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,302 copying src/meme_4.6.0/src/meme_bin-seed_diffs.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,304 copying src/meme_4.6.0/src/glam2_dna_prior.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,306 copying src/meme_4.6.0/src/libcommon_la-motif.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,308 copying src/meme_4.6.0/src/meme2images.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,311 copying src/meme_4.6.0/src/qvalue.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,313 copying src/meme_4.6.0/src/pmp_bf.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,316 copying src/meme_4.6.0/src/libcommon_la-mast-util.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,318 copying src/meme_4.6.0/src/mcast.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,321 copying src/meme_4.6.0/src/read_csv.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,322 copying src/meme_4.6.0/src/mast2txt-mast2txt.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,326 copying src/meme_4.6.0/src/fisher_exact.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,328 copying src/meme_4.6.0/src/glam2-glam2_util.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,330 copying src/meme_4.6.0/src/ceqlogo-ceqlogo.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,335 copying src/meme_4.6.0/src/libcommon_la-tree.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,336 copying src/meme_4.6.0/src/libcommon_la-dp.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,338 copying src/meme_4.6.0/src/mhmm-io.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,340 copying src/meme_4.6.0/src/ame.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,342 copying src/meme_4.6.0/src/libcommon_la-hash_alph.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,343 copying src/meme_4.6.0/src/prior-reader-from-psp.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,346 copying src/meme_4.6.0/src/fisher_exact.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,348 copying src/meme_4.6.0/src/tree-tree.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,351 copying src/meme_4.6.0/src/motifs.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,353 copying src/meme_4.6.0/src/libcommon_la-matrix.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,355 copying src/meme_4.6.0/src/libcommon_la-ranksum_test.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,357 copying src/meme_4.6.0/src/pssm.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,360 copying src/meme_4.6.0/src/user.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,361 copying src/meme_4.6.0/src/simple-getopt.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,363 copying src/meme_4.6.0/src/data-block-reader.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,365 copying src/meme_4.6.0/src/libcommon_la-motif_regexp.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,368 copying src/meme_4.6.0/src/meme-print-html.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,369 copying src/meme_4.6.0/src/gomo_highlight-gomo_highlight.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,372 copying src/meme_4.6.0/src/meme-io -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,403 copying src/meme_4.6.0/src/libcommon_la-log-hmm.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,405 copying src/meme_4.6.0/src/split.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,406 copying src/meme_4.6.0/src/gendb -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,410 copying src/meme_4.6.0/src/glam2_column_sample.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,412 copying src/meme_4.6.0/src/libcommon_la-build-hmm.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,415 copying src/meme_4.6.0/src/meme-io.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,417 copying src/meme_4.6.0/src/nrutil.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,419 copying src/meme_4.6.0/src/libcommon_la-xml-util.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,420 copying src/meme_4.6.0/src/draw-mhmm.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,423 copying src/meme_4.6.0/src/libcommon_la-alignment.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,425 copying src/meme_4.6.0/src/compute-uniform-priors.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,427 copying src/meme_4.6.0/src/libcommon_la-xml-out.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,429 copying src/meme_4.6.0/src/libcommon_la-utils.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,431 copying src/meme_4.6.0/src/tcm.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,433 copying src/meme_4.6.0/src/evomodel.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,435 copying src/meme_4.6.0/src/hash_alph.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,437 copying src/meme_4.6.0/src/meme_bin-message.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,438 copying src/meme_4.6.0/src/verbosity.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,440 copying src/meme_4.6.0/src/glam2scan-glam2_alignment.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,442 copying src/meme_4.6.0/src/glam2scan-glam2_heap.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,444 copying src/meme_4.6.0/src/likelihood.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,446 copying src/meme_4.6.0/src/xml-util.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,448 copying src/meme_4.6.0/src/glam2 -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,453 copying src/meme_4.6.0/src/hash_table.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,456 copying src/meme_4.6.0/src/pssm.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,458 copying src/meme_4.6.0/src/meme_bin-sp_matrix.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,461 copying src/meme_4.6.0/src/fasta-io.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,462 copying src/meme_4.6.0/src/meme-xml-html.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,464 copying src/meme_4.6.0/src/glam2_scan.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,466 copying src/meme_4.6.0/src/tomtom.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,470 copying src/meme_4.6.0/src/spearman-rank-correlation.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,472 copying src/meme_4.6.0/src/glam2_heap.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,474 copying src/meme_4.6.0/src/clustalw2phylip -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,477 copying src/meme_4.6.0/src/libcommon_la-metameme.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,479 copying src/meme_4.6.0/src/ranksum_test-ranksum_test.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,481 copying src/meme_4.6.0/src/empirical-qvalue.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,483 copying src/meme_4.6.0/src/libcommon_la-subst-matrix.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,486 copying src/meme_4.6.0/src/libcommon_la-subst-matrix.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,487 copying src/meme_4.6.0/src/xml-util.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,489 copying src/meme_4.6.0/src/libcommon_la-simple-getopt.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,491 copying src/meme_4.6.0/src/rdb-matrix.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,494 copying src/meme_4.6.0/src/libcommon_la-motif.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,495 copying src/meme_4.6.0/src/mast.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,499 copying src/meme_4.6.0/src/logs.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,501 copying src/meme_4.6.0/src/regress.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,503 copying src/meme_4.6.0/src/meme_bin-banner.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,505 copying src/meme_4.6.0/src/glam2-glam2_column_sample.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,507 copying src/meme_4.6.0/src/ranksum_test -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,510 copying src/meme_4.6.0/src/alphtype.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,512 copying src/meme_4.6.0/src/libcommon_la-binary-search.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,514 copying src/meme_4.6.0/src/libcommon_la-matrix.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,515 copying src/meme_4.6.0/src/glam2_args.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,518 copying src/meme_4.6.0/src/string-list.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,520 copying src/meme_4.6.0/src/tree.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,523 copying src/meme_4.6.0/src/glam2_alphabet.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,524 copying src/meme_4.6.0/src/ama_scan.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,526 copying src/meme_4.6.0/src/alignment.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,529 copying src/meme_4.6.0/src/red-black-tree.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,531 copying src/meme_4.6.0/src/seed.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,533 copying src/meme_4.6.0/src/clustalw-io.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,535 copying src/meme_4.6.0/src/libcommon_la-meme-io.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,539 copying src/meme_4.6.0/src/libcommon_la-buffer.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,541 copying src/meme_4.6.0/src/fitevd-fitevd.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,544 copying src/meme_4.6.0/src/remove-alignment-gaps.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,546 copying src/meme_4.6.0/src/mast2txt.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,550 copying src/meme_4.6.0/src/rdb-matrix.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,552 copying src/meme_4.6.0/src/meme2images-meme2images.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,554 copying src/meme_4.6.0/src/gomo_highlight.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,556 copying src/meme_4.6.0/src/glam2_dirichlet.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,558 copying src/meme_4.6.0/src/libcommon_la-mast-util.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,560 copying src/meme_4.6.0/src/meme_bin-branching_search.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,562 copying src/meme_4.6.0/src/libcommon_la-reservoir.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,564 copying src/meme_4.6.0/src/libcommon_la-mhmm-state.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,566 copying src/meme_4.6.0/src/libcommon_la-object-list.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,567 copying src/meme_4.6.0/src/cisml.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,571 copying src/meme_4.6.0/src/libcommon_la-match.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,573 copying src/meme_4.6.0/src/libcommon_la-seq-reader-from-fasta.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,575 copying src/meme_4.6.0/src/spamo.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,578 copying src/meme_4.6.0/src/compute-prior-dist.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,580 copying src/meme_4.6.0/src/banner.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,582 copying src/meme_4.6.0/src/glam2scan-glam2_dna_prior.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,584 copying src/meme_4.6.0/src/libcommon_la-motif_regexp.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,585 copying src/meme_4.6.0/src/libcommon_la-data-block.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,587 copying src/meme_4.6.0/src/subst-matrix.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,589 copying src/meme_4.6.0/src/libcommon_la-array.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,591 copying src/meme_4.6.0/src/logodds.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,594 copying src/meme_4.6.0/src/libcommon_la-rdb-matrix.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,595 copying src/meme_4.6.0/src/gomo-gomo.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,599 copying src/meme_4.6.0/src/matrix.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,602 copying src/meme_4.6.0/src/spamo-scan.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,604 copying src/meme_4.6.0/src/prior-dist.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,606 copying src/meme_4.6.0/src/libcommon_la-rdb-matrix.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,608 copying src/meme_4.6.0/src/mhmme.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,611 copying src/meme_4.6.0/src/buffer.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,614 copying src/meme_4.6.0/src/display.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,616 copying src/meme_4.6.0/src/pssm-distr.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,619 copying src/meme_4.6.0/src/align.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,621 copying src/meme_4.6.0/src/curves.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,623 copying src/meme_4.6.0/src/readseq-readseq.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,627 copying src/meme_4.6.0/src/clustalw2fasta.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,630 copying src/meme_4.6.0/src/merger.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,633 copying src/meme_4.6.0/src/glam2scan-glam2_recode3_20comp.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,636 copying src/meme_4.6.0/src/utils.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,641 copying src/meme_4.6.0/src/ureadseq.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,645 copying src/meme_4.6.0/src/seq-reader-from-fasta.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,648 copying src/meme_4.6.0/src/meme_bin-starts.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,651 copying src/meme_4.6.0/src/compute-prior-dist -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,655 copying src/meme_4.6.0/src/gendb.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,657 copying src/meme_4.6.0/src/Makefile -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,667 copying src/meme_4.6.0/src/beadstring.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,669 copying src/meme_4.6.0/src/alphabet.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,672 copying src/meme_4.6.0/src/tree.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,676 copying src/meme_4.6.0/src/mcast-mcast.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,679 copying src/meme_4.6.0/src/glam2_alphabet.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,682 copying src/meme_4.6.0/src/libcommon_la-empirical-qvalue.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,685 copying src/meme_4.6.0/src/glam2_glam2_aln.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,688 copying src/meme_4.6.0/src/reservoir.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,691 copying src/meme_4.6.0/src/glam2mask-glam2_alignment.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,694 copying src/meme_4.6.0/src/glam2scan-glam2_scan_args.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:41,698 creating build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,699 copying src/meme_4.6.0/src/.deps/meme_bin-prior.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,703 copying src/meme_4.6.0/src/.deps/libcommon_la-simple-getopt.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,706 copying src/meme_4.6.0/src/.deps/meme_bin-meme-print-html.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,709 copying src/meme_4.6.0/src/.deps/libcommon_la-array.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,713 copying src/meme_4.6.0/src/.deps/libcommon_la-motifs.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,715 copying src/meme_4.6.0/src/.deps/glam2scan-glam2_scan.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,718 copying src/meme_4.6.0/src/.deps/libcommon_la-qvalue.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,720 copying src/meme_4.6.0/src/.deps/fasta_io-fasta-io.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,723 copying src/meme_4.6.0/src/.deps/meme_bin-psp.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,725 copying src/meme_4.6.0/src/.deps/libcommon_la-build-hmm.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,728 copying src/meme_4.6.0/src/.deps/meme_bin-meme.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,730 copying src/meme_4.6.0/src/.deps/meme_bin-read_seq_file.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,733 copying src/meme_4.6.0/src/.deps/glam2scan-glam2_alignment.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,735 copying src/meme_4.6.0/src/.deps/libcommon_la-subst-matrix.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,738 copying src/meme_4.6.0/src/.deps/libcommon_la-logodds.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,740 copying src/meme_4.6.0/src/.deps/getsize.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,742 copying src/meme_4.6.0/src/.deps/libcommon_la-red-black-tree.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,745 copying src/meme_4.6.0/src/.deps/mast-diagram.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,747 copying src/meme_4.6.0/src/.deps/glam2-glam2_alphabet.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,750 copying src/meme_4.6.0/src/.deps/alphtype-alphtype.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,752 copying src/meme_4.6.0/src/.deps/meme_bin-seed.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,755 copying src/meme_4.6.0/src/.deps/qvalue-qvalue.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,757 copying src/meme_4.6.0/src/.deps/libcommon_la-buffer.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,760 copying src/meme_4.6.0/src/.deps/fitevd-fitevd.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,763 copying src/meme_4.6.0/src/.deps/meme_bin-seq2theta.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,765 copying src/meme_4.6.0/src/.deps/libcommon_la-prior-dist.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,768 copying src/meme_4.6.0/src/.deps/meme_bin-subseq7.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,770 copying src/meme_4.6.0/src/.deps/meme_bin-logs.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,772 copying src/meme_4.6.0/src/.deps/gomo_highlight-gomo_highlight.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,774 copying src/meme_4.6.0/src/.deps/glam2-glam2_glam2_aln.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,777 copying src/meme_4.6.0/src/.deps/spamo-spamo-cisml.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,779 copying src/meme_4.6.0/src/.deps/ceqlogo-ceqlogo.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,782 copying src/meme_4.6.0/src/.deps/libcommon_la-background.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,784 copying src/meme_4.6.0/src/.deps/libcommon_la-motiph-scoring.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,786 copying src/meme_4.6.0/src/.deps/fimo-fimo.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,788 copying src/meme_4.6.0/src/.deps/mcast-mcast.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,791 copying src/meme_4.6.0/src/.deps/ama-ama.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,793 copying src/meme_4.6.0/src/.deps/libcommon_la-binary-search.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,794 copying src/meme_4.6.0/src/.deps/libcommon_la-rdb-matrix.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,796 copying src/meme_4.6.0/src/.deps/glam2-glam2_column_sample.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,799 copying src/meme_4.6.0/src/.deps/glam2mask-glam2_alignment.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,801 copying src/meme_4.6.0/src/.deps/tree-tree.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,803 copying src/meme_4.6.0/src/.deps/libcommon_la-seq-reader-from-fasta.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,805 copying src/meme_4.6.0/src/.deps/glam2scan-glam2_scan_init.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,808 copying src/meme_4.6.0/src/.deps/glam2scan-glam2_util.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,810 copying src/meme_4.6.0/src/.deps/meme_bin-banner.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,812 copying src/meme_4.6.0/src/.deps/spamo-spamo-scan.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,815 copying src/meme_4.6.0/src/.deps/glam2-glam2_glam2.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,817 copying src/meme_4.6.0/src/.deps/libcommon_la-dp.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,819 copying src/meme_4.6.0/src/.deps/glam2scan-glam2_scan_output.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,822 copying src/meme_4.6.0/src/.deps/meme_bin-starts.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,824 copying src/meme_4.6.0/src/.deps/readseq-readseq.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,826 copying src/meme_4.6.0/src/.deps/mhmm_io-mhmm-io.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,829 copying src/meme_4.6.0/src/.deps/gomo-read_csv.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,831 copying src/meme_4.6.0/src/.deps/libcommon_la-motif.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,833 copying src/meme_4.6.0/src/.deps/libcommon_la-evomodel.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,835 copying src/meme_4.6.0/src/.deps/libcommon_la-write-mhmm.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,837 copying src/meme_4.6.0/src/.deps/clustalw2fasta-clustalw2fasta.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,839 copying src/meme_4.6.0/src/.deps/libcommon_la-read-mhmm.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,842 copying src/meme_4.6.0/src/.deps/gomo-linked-list.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,844 copying src/meme_4.6.0/src/.deps/libcommon_la-gendb.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,846 copying src/meme_4.6.0/src/.deps/glam2scan-glam2_dirichlet.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,848 copying src/meme_4.6.0/src/.deps/glam2-glam2_dna_prior.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,850 copying src/meme_4.6.0/src/.deps/libcommon_la-ranksum_test.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,852 copying src/meme_4.6.0/src/.deps/clustalw_io-clustalw-io.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,854 copying src/meme_4.6.0/src/.deps/libcommon_la-data-block.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,856 copying src/meme_4.6.0/src/.deps/libcommon_la-cisml.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,859 copying src/meme_4.6.0/src/.deps/libcommon_la-seq.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,861 copying src/meme_4.6.0/src/.deps/libcommon_la-evomodel_with_loss.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,863 copying src/meme_4.6.0/src/.deps/meme_bin-sp_matrix.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,865 copying src/meme_4.6.0/src/.deps/libcommon_la-substmatrix-table.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,867 copying src/meme_4.6.0/src/.deps/libcommon_la-log-hmm.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,869 copying src/meme_4.6.0/src/.deps/libcommon_la-data-block-reader.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,871 copying src/meme_4.6.0/src/.deps/libcommon_la-alignment.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,873 copying src/meme_4.6.0/src/.deps/spamo-linked-list.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,875 copying src/meme_4.6.0/src/.deps/glam2-glam2_util.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,878 copying src/meme_4.6.0/src/.deps/libcommon_la-string-match.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,880 copying src/meme_4.6.0/src/.deps/meme_bin-linked-list.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,882 copying src/meme_4.6.0/src/.deps/libcommon_la-pssm.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,884 copying src/meme_4.6.0/src/.deps/libcommon_la-motif_regexp.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,886 copying src/meme_4.6.0/src/.deps/libcommon_la-order.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,888 copying src/meme_4.6.0/src/.deps/libcommon_la-string-list.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,890 copying src/meme_4.6.0/src/.deps/meme_bin-init.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,892 copying src/meme_4.6.0/src/.deps/libcommon_la-prior-reader-from-psp.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,895 copying src/meme_4.6.0/src/.deps/mast-mast.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,897 copying src/meme_4.6.0/src/.deps/glam2-glam2_fasta.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,899 copying src/meme_4.6.0/src/.deps/libcommon_la-utils.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,901 copying src/meme_4.6.0/src/.deps/libcommon_la-alphabet.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,904 copying src/meme_4.6.0/src/.deps/meme_xml_html-meme-print-html.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,906 copying src/meme_4.6.0/src/.deps/mhmme-mhmme.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,908 copying src/meme_4.6.0/src/.deps/gomo-gomo_highlight.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,911 copying src/meme_4.6.0/src/.deps/ranksum_test-ranksum_test.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,913 copying src/meme_4.6.0/src/.deps/gomo-gomo.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,915 copying src/meme_4.6.0/src/.deps/meme2images-meme2images.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,917 copying src/meme_4.6.0/src/.deps/libcommon_la-regress.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,920 copying src/meme_4.6.0/src/.deps/gomo-ranksum_test.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,922 copying src/meme_4.6.0/src/.deps/remove_alignment_gaps-remove-alignment-gaps.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,924 copying src/meme_4.6.0/src/.deps/libcommon_la-xml-util.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,926 copying src/meme_4.6.0/src/.deps/libcommon_la-array-list.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,928 copying src/meme_4.6.0/src/.deps/meme_bin-oops.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,931 copying src/meme_4.6.0/src/.deps/meme_bin-llr.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,933 copying src/meme_4.6.0/src/.deps/readseq-ureadseq.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,935 copying src/meme_4.6.0/src/.deps/draw_mhmm-draw-mhmm.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,937 copying src/meme_4.6.0/src/.deps/spamo-spamo.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,939 copying src/meme_4.6.0/src/.deps/libcommon_la-match.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,942 copying src/meme_4.6.0/src/.deps/glam2-glam2_init.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,944 copying src/meme_4.6.0/src/.deps/glam2scan-glam2_dna_prior.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,946 copying src/meme_4.6.0/src/.deps/draw_mhmm-read-mhmm.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,948 copying src/meme_4.6.0/src/.deps/mhmms-mhmms.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,950 copying src/meme_4.6.0/src/.deps/glam2-glam2_dirichlet.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,952 copying src/meme_4.6.0/src/.deps/libcommon_la-pssm-distr.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,955 copying src/meme_4.6.0/src/.deps/mhmmscan-mhmmscan.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,957 copying src/meme_4.6.0/src/.deps/libcommon_la-mhmm.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,959 copying src/meme_4.6.0/src/.deps/meme_bin-dpalign.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,961 copying src/meme_4.6.0/src/.deps/libcommon_la-empirical-qvalue.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,963 copying src/meme_4.6.0/src/.deps/libcommon_la-clustalw-io.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,965 copying src/meme_4.6.0/src/.deps/spamo-cisml-sax.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,968 copying src/meme_4.6.0/src/.deps/meme_bin-partition.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,970 copying src/meme_4.6.0/src/.deps/mast2txt-mast2txt.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,972 copying src/meme_4.6.0/src/.deps/shadow-shadow.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,975 copying src/meme_4.6.0/src/.deps/meme_bin-meme_util.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,977 copying src/meme_4.6.0/src/.deps/ame-ame.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,979 copying src/meme_4.6.0/src/.deps/meme_bin-verbosity.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,981 copying src/meme_4.6.0/src/.deps/libcommon_la-hash_table.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,984 copying src/meme_4.6.0/src/.deps/libcommon_la-fisher_exact.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,986 copying src/meme_4.6.0/src/.deps/pmp_bf-pmp_bf.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,988 copying src/meme_4.6.0/src/.deps/glam2mask-glam2_util.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,990 copying src/meme_4.6.0/src/.deps/meme_xml_html-meme-xml-html.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,992 copying src/meme_4.6.0/src/.deps/libcommon_la-tree.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,995 copying src/meme_4.6.0/src/.deps/glam2mask-glam2_glam2mask.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,997 copying src/meme_4.6.0/src/.deps/glam2scan-glam2_alphabet.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:41,999 copying src/meme_4.6.0/src/.deps/libcommon_la-spearman-rank-correlation.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,001 copying src/meme_4.6.0/src/.deps/reconcile_tree_alignment-reconcile-tree-alignment.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,003 copying src/meme_4.6.0/src/.deps/meme_bin-seed_diffs.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,005 copying src/meme_4.6.0/src/.deps/ama-ama_scan.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,008 copying src/meme_4.6.0/src/.deps/glam2format-glam2_fasta.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,010 copying src/meme_4.6.0/src/.deps/libcommon_la-matrix.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,012 copying src/meme_4.6.0/src/.deps/glam2format-glam2_util.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,014 copying src/meme_4.6.0/src/.deps/libcommon_la-hash_alph.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,016 copying src/meme_4.6.0/src/.deps/glam2-glam2_args.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,018 copying src/meme_4.6.0/src/.deps/meme_bin-justlike.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,020 copying src/meme_4.6.0/src/.deps/reduce_alignment-reduce-alignment.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,022 copying src/meme_4.6.0/src/.deps/glam2scan-glam2_motif.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,025 copying src/meme_4.6.0/src/.deps/libcommon_la-karlin.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,027 copying src/meme_4.6.0/src/.deps/glam2scan-glam2_fasta.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,029 copying src/meme_4.6.0/src/.deps/meme_bin-mp.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,030 copying src/meme_4.6.0/src/.deps/mhmm-mhmm.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,033 copying src/meme_4.6.0/src/.deps/meme_bin-message.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,035 copying src/meme_4.6.0/src/.deps/libcommon_la-mast-util.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,037 copying src/meme_4.6.0/src/.deps/libcommon_la-heap.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,039 copying src/meme_4.6.0/src/.deps/meme_bin-display.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,041 copying src/meme_4.6.0/src/.deps/libcommon_la-mhmms.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,043 copying src/meme_4.6.0/src/.deps/tomtom-tomtom.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,046 copying src/meme_4.6.0/src/.deps/compute_uniform_priors-compute-uniform-priors.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,048 copying src/meme_4.6.0/src/.deps/libcommon_la-ceqlogo.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,050 copying src/meme_4.6.0/src/.deps/meme_bin-calculate_p_y.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,052 copying src/meme_4.6.0/src/.deps/gendb-gendb.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,054 copying src/meme_4.6.0/src/.deps/libcommon_la-metameme.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,056 copying src/meme_4.6.0/src/.deps/meme_bin-tcm.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,059 copying src/meme_4.6.0/src/.deps/clustalw2phylip-clustalw2phylip.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,061 copying src/meme_4.6.0/src/.deps/glam2mask-glam2_fasta.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,063 copying src/meme_4.6.0/src/.deps/meme_io-meme-io.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,066 copying src/meme_4.6.0/src/.deps/libcommon_la-object-list.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,068 copying src/meme_4.6.0/src/.deps/libcommon_la-scored-sites.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,070 copying src/meme_4.6.0/src/.deps/glam2format-glam2_glam2format.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,072 copying src/meme_4.6.0/src/.deps/meme_bin-em.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,074 copying src/meme_4.6.0/src/.deps/spamo-spamo-matches.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,076 copying src/meme_4.6.0/src/.deps/log_hmm-log-hmm.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,078 copying src/meme_4.6.0/src/.deps/libcommon_la-fitevd.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,081 copying src/meme_4.6.0/src/.deps/compute_prior_dist-compute-prior-dist.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,083 copying src/meme_4.6.0/src/.deps/glam2scan-glam2_recode3_20comp.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,085 copying src/meme_4.6.0/src/.deps/glam2format-glam2_alignment.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,087 copying src/meme_4.6.0/src/.deps/glam2-glam2_recode3_20comp.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,089 copying src/meme_4.6.0/src/.deps/spamo-spamo-output.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,091 copying src/meme_4.6.0/src/.deps/motiph-motiph.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,093 copying src/meme_4.6.0/src/.deps/glam2-glam2_site_sample.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,095 copying src/meme_4.6.0/src/.deps/gomo-merger.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,098 copying src/meme_4.6.0/src/.deps/meme_bin-discretize.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,100 copying src/meme_4.6.0/src/.deps/libcommon_la-xml-out.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,102 copying src/meme_4.6.0/src/.deps/beadstring-beadstring.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,104 copying src/meme_4.6.0/src/.deps/libcommon_la-fasta-io.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,106 copying src/meme_4.6.0/src/.deps/libcommon_la-read_sequence.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,108 copying src/meme_4.6.0/src/.deps/libcommon_la-mhmm-state.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,110 copying src/meme_4.6.0/src/.deps/glam2-glam2_output.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,112 copying src/meme_4.6.0/src/.deps/glam2scan-glam2_scan_args.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,115 copying src/meme_4.6.0/src/.deps/libcommon_la-meme-io.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,117 copying src/meme_4.6.0/src/.deps/libcommon_la-io.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,119 copying src/meme_4.6.0/src/.deps/meme_bin-likelihood.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,121 copying src/meme_4.6.0/src/.deps/libcommon_la-reservoir.Plo -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,124 copying src/meme_4.6.0/src/.deps/glam2scan-glam2_heap.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,126 copying src/meme_4.6.0/src/.deps/xsltproc_lite-xsltproc_lite.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,129 copying src/meme_4.6.0/src/.deps/meme_bin-branching_search.Po -> build/src/meme_4.6.0/src/.deps 2023-09-11T02:11:42,131 copying src/meme_4.6.0/src/glam2_scan_output.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,133 copying src/meme_4.6.0/src/starts.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,135 copying src/meme_4.6.0/src/libcommon_la-mhmms.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,138 copying src/meme_4.6.0/src/beadstring-beadstring.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,141 copying src/meme_4.6.0/src/libcommon_la-ceqlogo.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,145 copying src/meme_4.6.0/src/motif_regexp.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,147 copying src/meme_4.6.0/src/libcommon_la-logodds.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,149 copying src/meme_4.6.0/src/shadow.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,152 copying src/meme_4.6.0/src/libcommon_la-fitevd.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,154 copying src/meme_4.6.0/src/libcommon_la-alphabet.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,156 copying src/meme_4.6.0/src/reservoir.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,158 copying src/meme_4.6.0/src/beadstring -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,202 copying src/meme_4.6.0/src/gomo -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,244 copying src/meme_4.6.0/src/libcommon_la-substmatrix-table.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,246 copying src/meme_4.6.0/src/params.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,248 copying src/meme_4.6.0/src/mhmme -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,282 copying src/meme_4.6.0/src/meme_bin-partition.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,284 copying src/meme_4.6.0/src/ranksum_test.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,286 copying src/meme_4.6.0/src/glam2scan-glam2_scan.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,288 copying src/meme_4.6.0/src/compute-uniform-priors -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,290 copying src/meme_4.6.0/src/mcast -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,293 copying src/meme_4.6.0/src/libcommon_la-fisher_exact.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,295 copying src/meme_4.6.0/src/libcommon_la-pssm.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,297 copying src/meme_4.6.0/src/libcommon_la-evomodel_with_loss.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,298 copying src/meme_4.6.0/src/motif.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,301 copying src/meme_4.6.0/src/fcodon.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,305 copying src/meme_4.6.0/src/hashu.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,307 copying src/meme_4.6.0/src/compute_uniform_priors-compute-uniform-priors.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,308 copying src/meme_4.6.0/src/seq.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,311 copying src/meme_4.6.0/src/data-block.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,313 copying src/meme_4.6.0/src/array.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,315 copying src/meme_4.6.0/src/xml-out.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,317 copying src/meme_4.6.0/src/meme_bin-meme.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,319 copying src/meme_4.6.0/src/mhmm-dtd.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,321 copying src/meme_4.6.0/src/meme_bin-seed.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,323 copying src/meme_4.6.0/src/prior.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,325 copying src/meme_4.6.0/src/psp.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,327 copying src/meme_4.6.0/src/beadstring.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,330 copying src/meme_4.6.0/src/libcommon_la-simple-getopt.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,333 copying src/meme_4.6.0/src/meme-dtd.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,335 copying src/meme_4.6.0/src/gomo-read_csv.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,337 copying src/meme_4.6.0/src/glam2_glam2.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,339 copying src/meme_4.6.0/src/llr.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,341 copying src/meme_4.6.0/src/meme_bin-seq2theta.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,343 copying src/meme_4.6.0/src/glam2format-glam2_alignment.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,345 copying src/meme_4.6.0/src/libcommon_la-motiph-scoring.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,348 copying src/meme_4.6.0/src/libcommon_la-prior-reader-from-psp.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,350 copying src/meme_4.6.0/src/glam2_scan.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,352 copying src/meme_4.6.0/src/libcommon_la-reservoir.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,354 copying src/meme_4.6.0/src/mhmms -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,387 copying src/meme_4.6.0/src/gomo.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,390 copying src/meme_4.6.0/src/libcommon_la-string-match.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,393 copying src/meme_4.6.0/src/getsize.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,395 copying src/meme_4.6.0/src/libcommon_la-mhmm.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,398 copying src/meme_4.6.0/src/glam2format-glam2_glam2format.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,400 copying src/meme_4.6.0/src/clustalw-io -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,404 copying src/meme_4.6.0/src/libcommon_la-array-list.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,406 copying src/meme_4.6.0/src/glam2_glam2mask.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,408 copying src/meme_4.6.0/src/seed_diffs.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,410 copying src/meme_4.6.0/src/sp_matrix.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,412 copying src/meme_4.6.0/src/libcommon_la-background.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,415 copying src/meme_4.6.0/src/fasta-io -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,418 copying src/meme_4.6.0/src/shuffle_int.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,420 copying src/meme_4.6.0/src/meme_bin-oops.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,423 copying src/meme_4.6.0/src/libcommon_la-read-mhmm.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,425 copying src/meme_4.6.0/src/libcommon_la-seq.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,429 copying src/meme_4.6.0/src/meme_bin-logs.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,431 copying src/meme_4.6.0/src/mhmm -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,485 copying src/meme_4.6.0/src/mhmm-io -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,528 copying src/meme_4.6.0/src/background.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,531 copying src/meme_4.6.0/src/diagram.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,533 copying src/meme_4.6.0/src/libcommon_la-pssm-distr.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,535 copying src/meme_4.6.0/src/xsltproc_lite -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,537 copying src/meme_4.6.0/src/glam2_dna_prior.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,540 copying src/meme_4.6.0/src/linked-list.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,542 copying src/meme_4.6.0/src/display.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,546 copying src/meme_4.6.0/src/substmatrix-table.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,548 copying src/meme_4.6.0/src/dpalign.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,551 copying src/meme_4.6.0/src/substmatrix-table.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,553 copying src/meme_4.6.0/src/cisml.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,557 copying src/meme_4.6.0/src/libcommon_la-cisml.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,561 copying src/meme_4.6.0/src/order.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,564 copying src/meme_4.6.0/src/read_sequence.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,566 copying src/meme_4.6.0/src/libcommon_la-red-black-tree.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,568 copying src/meme_4.6.0/src/ame-ame.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,572 copying src/meme_4.6.0/src/sp_matrix.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,575 copying src/meme_4.6.0/src/remove-alignment-gaps -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,579 copying src/meme_4.6.0/src/mhmm-mhmm.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,582 copying src/meme_4.6.0/src/logodds.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,585 creating build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,586 copying src/meme_4.6.0/src/libxslt/libxslt_la-transform.lo -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,588 copying src/meme_4.6.0/src/libxslt/libxslt_la-attributes.lo -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,590 copying src/meme_4.6.0/src/libxslt/win32config.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,592 copying src/meme_4.6.0/src/libxslt/libxslt_la-namespaces.o -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,595 copying src/meme_4.6.0/src/libxslt/libxslt_la-xsltutils.lo -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,597 copying src/meme_4.6.0/src/libxslt/libxslt_la-preproc.o -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,600 copying src/meme_4.6.0/src/libxslt/functions.c -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,603 copying src/meme_4.6.0/src/libxslt/libxslt_la-extra.o -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,605 copying src/meme_4.6.0/src/libxslt/libxslt_la-extensions.o -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,608 copying src/meme_4.6.0/src/libxslt/documents.c -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,611 copying src/meme_4.6.0/src/libxslt/libxslt_la-namespaces.lo -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,613 copying src/meme_4.6.0/src/libxslt/libxslt_la-attrvt.lo -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,615 copying src/meme_4.6.0/src/libxslt/libxslt_la-numbers.o -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,618 copying src/meme_4.6.0/src/libxslt/extra.c -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,620 copying src/meme_4.6.0/src/libxslt/variables.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,622 copying src/meme_4.6.0/src/libxslt/Makefile.am -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,624 copying src/meme_4.6.0/src/libxslt/libxslt_la-xsltutils.o -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,628 copying src/meme_4.6.0/src/libxslt/keys.c -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,630 creating build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,632 copying src/meme_4.6.0/src/libxslt/.libs/libxslt_la-namespaces.o -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,634 copying src/meme_4.6.0/src/libxslt/.libs/libxslt_la-preproc.o -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,637 copying src/meme_4.6.0/src/libxslt/.libs/libxslt_la-extra.o -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,640 copying src/meme_4.6.0/src/libxslt/.libs/libxslt_la-extensions.o -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,643 copying src/meme_4.6.0/src/libxslt/.libs/libxslt_la-numbers.o -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,646 copying src/meme_4.6.0/src/libxslt/.libs/libxslt_la-xsltutils.o -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,649 copying src/meme_4.6.0/src/libxslt/.libs/libxslt_la-keys.o -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,652 copying src/meme_4.6.0/src/libxslt/.libs/libxslt_la-xslt.o -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,655 copying src/meme_4.6.0/src/libxslt/.libs/libxslt_la-functions.o -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,658 copying src/meme_4.6.0/src/libxslt/.libs/libxslt.la -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,660 copying src/meme_4.6.0/src/libxslt/.libs/libxslt_la-documents.o -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,662 copying src/meme_4.6.0/src/libxslt/.libs/libxslt_la-attributes.o -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,665 copying src/meme_4.6.0/src/libxslt/.libs/libxslt_la-templates.o -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,668 copying src/meme_4.6.0/src/libxslt/.libs/libxslt_la-imports.o -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,671 copying src/meme_4.6.0/src/libxslt/.libs/libxslt_la-transform.o -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,675 copying src/meme_4.6.0/src/libxslt/.libs/libxslt_la-security.o -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,678 copying src/meme_4.6.0/src/libxslt/.libs/libxslt_la-variables.o -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,681 copying src/meme_4.6.0/src/libxslt/.libs/libxslt.a -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,730 copying src/meme_4.6.0/src/libxslt/.libs/libxslt_la-attrvt.o -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,732 copying src/meme_4.6.0/src/libxslt/.libs/libxslt_la-pattern.o -> build/src/meme_4.6.0/src/libxslt/.libs 2023-09-11T02:11:42,735 copying src/meme_4.6.0/src/libxslt/numbers.c -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,738 copying src/meme_4.6.0/src/libxslt/libxslt_la-keys.o -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,741 copying src/meme_4.6.0/src/libxslt/namespaces.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,742 copying src/meme_4.6.0/src/libxslt/Copyright -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,744 copying src/meme_4.6.0/src/libxslt/Makefile.in -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,747 copying src/meme_4.6.0/src/libxslt/pattern.c -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,750 copying src/meme_4.6.0/src/libxslt/libxslt_la-xslt.o -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,753 copying src/meme_4.6.0/src/libxslt/pattern.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,754 copying src/meme_4.6.0/src/libxslt/keys.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,756 copying src/meme_4.6.0/src/libxslt/preproc.c -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,759 copying src/meme_4.6.0/src/libxslt/xslt.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,761 copying src/meme_4.6.0/src/libxslt/xsltconfig.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,763 copying src/meme_4.6.0/src/libxslt/libxslt_la-functions.o -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,765 copying src/meme_4.6.0/src/libxslt/libxslt.la -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,767 copying src/meme_4.6.0/src/libxslt/attrvt.c -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,769 copying src/meme_4.6.0/src/libxslt/security.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,771 copying src/meme_4.6.0/src/libxslt/libxslt_la-documents.o -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,773 copying src/meme_4.6.0/src/libxslt/templates.c -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,776 copying src/meme_4.6.0/src/libxslt/xslt.c -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,781 copying src/meme_4.6.0/src/libxslt/xsltutils.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,783 copying src/meme_4.6.0/src/libxslt/libxslt_la-preproc.lo -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,784 copying src/meme_4.6.0/src/libxslt/libxslt_la-templates.lo -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,786 copying src/meme_4.6.0/src/libxslt/functions.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,788 copying src/meme_4.6.0/src/libxslt/numbersInternals.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,790 copying src/meme_4.6.0/src/libxslt/libxslt_la-pattern.lo -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,792 copying src/meme_4.6.0/src/libxslt/attributes.c -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,794 copying src/meme_4.6.0/src/libxslt/libxslt_la-variables.lo -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,796 copying src/meme_4.6.0/src/libxslt/libxslt_la-documents.lo -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,798 copying src/meme_4.6.0/src/libxslt/Makefile -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,801 copying src/meme_4.6.0/src/libxslt/libxslt_la-attributes.o -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,803 copying src/meme_4.6.0/src/libxslt/transform.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,805 copying src/meme_4.6.0/src/libxslt/namespaces.c -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,808 creating build/src/meme_4.6.0/src/libxslt/.deps 2023-09-11T02:11:42,809 copying src/meme_4.6.0/src/libxslt/.deps/libxslt_la-numbers.Plo -> build/src/meme_4.6.0/src/libxslt/.deps 2023-09-11T02:11:42,812 copying src/meme_4.6.0/src/libxslt/.deps/libxslt_la-attributes.Plo -> build/src/meme_4.6.0/src/libxslt/.deps 2023-09-11T02:11:42,814 copying src/meme_4.6.0/src/libxslt/.deps/libxslt_la-pattern.Plo -> build/src/meme_4.6.0/src/libxslt/.deps 2023-09-11T02:11:42,816 copying src/meme_4.6.0/src/libxslt/.deps/libxslt_la-xsltutils.Plo -> build/src/meme_4.6.0/src/libxslt/.deps 2023-09-11T02:11:42,818 copying src/meme_4.6.0/src/libxslt/.deps/libxslt_la-security.Plo -> build/src/meme_4.6.0/src/libxslt/.deps 2023-09-11T02:11:42,820 copying src/meme_4.6.0/src/libxslt/.deps/libxslt_la-variables.Plo -> build/src/meme_4.6.0/src/libxslt/.deps 2023-09-11T02:11:42,822 copying src/meme_4.6.0/src/libxslt/.deps/libxslt_la-attrvt.Plo -> build/src/meme_4.6.0/src/libxslt/.deps 2023-09-11T02:11:42,825 copying src/meme_4.6.0/src/libxslt/.deps/libxslt_la-xslt.Plo -> build/src/meme_4.6.0/src/libxslt/.deps 2023-09-11T02:11:42,827 copying src/meme_4.6.0/src/libxslt/.deps/libxslt_la-namespaces.Plo -> build/src/meme_4.6.0/src/libxslt/.deps 2023-09-11T02:11:42,829 copying src/meme_4.6.0/src/libxslt/.deps/libxslt_la-extensions.Plo -> build/src/meme_4.6.0/src/libxslt/.deps 2023-09-11T02:11:42,831 copying src/meme_4.6.0/src/libxslt/.deps/libxslt_la-documents.Plo -> build/src/meme_4.6.0/src/libxslt/.deps 2023-09-11T02:11:42,833 copying src/meme_4.6.0/src/libxslt/.deps/libxslt_la-imports.Plo -> build/src/meme_4.6.0/src/libxslt/.deps 2023-09-11T02:11:42,835 copying src/meme_4.6.0/src/libxslt/.deps/libxslt_la-keys.Plo -> build/src/meme_4.6.0/src/libxslt/.deps 2023-09-11T02:11:42,837 copying src/meme_4.6.0/src/libxslt/.deps/libxslt_la-templates.Plo -> build/src/meme_4.6.0/src/libxslt/.deps 2023-09-11T02:11:42,840 copying src/meme_4.6.0/src/libxslt/.deps/libxslt_la-transform.Plo -> build/src/meme_4.6.0/src/libxslt/.deps 2023-09-11T02:11:42,842 copying src/meme_4.6.0/src/libxslt/.deps/libxslt_la-preproc.Plo -> build/src/meme_4.6.0/src/libxslt/.deps 2023-09-11T02:11:42,844 copying src/meme_4.6.0/src/libxslt/.deps/libxslt_la-functions.Plo -> build/src/meme_4.6.0/src/libxslt/.deps 2023-09-11T02:11:42,846 copying src/meme_4.6.0/src/libxslt/.deps/libxslt_la-extra.Plo -> build/src/meme_4.6.0/src/libxslt/.deps 2023-09-11T02:11:42,849 copying src/meme_4.6.0/src/libxslt/transform.c -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,854 copying src/meme_4.6.0/src/libxslt/libxslt_la-templates.o -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,856 copying src/meme_4.6.0/src/libxslt/preproc.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,857 copying src/meme_4.6.0/src/libxslt/security.c -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,859 copying src/meme_4.6.0/src/libxslt/libxslt_la-numbers.lo -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,861 copying src/meme_4.6.0/src/libxslt/libxslt_la-imports.o -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,864 copying src/meme_4.6.0/src/libxslt/documents.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,866 copying src/meme_4.6.0/src/libxslt/libxslt_la-extensions.lo -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,867 copying src/meme_4.6.0/src/libxslt/extensions.c -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,870 copying src/meme_4.6.0/src/libxslt/libxslt_la-transform.o -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,874 copying src/meme_4.6.0/src/libxslt/extensions.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,876 copying src/meme_4.6.0/src/libxslt/libxslt_la-xslt.lo -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,878 copying src/meme_4.6.0/src/libxslt/libxslt_la-security.lo -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,880 copying src/meme_4.6.0/src/libxslt/extra.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,882 copying src/meme_4.6.0/src/libxslt/xsltwin32config.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,884 copying src/meme_4.6.0/src/libxslt/xsltexports.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,886 copying src/meme_4.6.0/src/libxslt/attributes.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,888 copying src/meme_4.6.0/src/libxslt/variables.c -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,891 copying src/meme_4.6.0/src/libxslt/libxslt_la-extra.lo -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,893 copying src/meme_4.6.0/src/libxslt/xsltwin32config.h.in -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,895 copying src/meme_4.6.0/src/libxslt/libxslt_la-security.o -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,897 copying src/meme_4.6.0/src/libxslt/imports.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,899 copying src/meme_4.6.0/src/libxslt/libxslt_la-variables.o -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,902 copying src/meme_4.6.0/src/libxslt/libxslt_la-imports.lo -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,904 copying src/meme_4.6.0/src/libxslt/imports.c -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,906 copying src/meme_4.6.0/src/libxslt/libxslt_la-functions.lo -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,907 copying src/meme_4.6.0/src/libxslt/xsltutils.c -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,910 copying src/meme_4.6.0/src/libxslt/templates.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,912 copying src/meme_4.6.0/src/libxslt/libxslt_la-attrvt.o -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,914 copying src/meme_4.6.0/src/libxslt/libxslt.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,916 copying src/meme_4.6.0/src/libxslt/libxslt_la-pattern.o -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,918 copying src/meme_4.6.0/src/libxslt/libxslt_la-keys.lo -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,920 copying src/meme_4.6.0/src/libxslt/xsltInternals.h -> build/src/meme_4.6.0/src/libxslt 2023-09-11T02:11:42,923 copying src/meme_4.6.0/src/getsize -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,926 copying src/meme_4.6.0/src/spamo-matches.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,928 copying src/meme_4.6.0/src/mhmm_io-mhmm-io.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,930 copying src/meme_4.6.0/src/libcommon_la-prior-reader-from-psp.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,932 copying src/meme_4.6.0/src/seed_diffs.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,935 copying src/meme_4.6.0/src/hash_alph.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,937 copying src/meme_4.6.0/src/meme.bin -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,981 copying src/meme_4.6.0/src/glam2mask -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,984 copying src/meme_4.6.0/src/gomo_highlight.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,987 copying src/meme_4.6.0/src/subseq7.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,990 copying src/meme_4.6.0/src/meme_bin-justlike.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,992 copying src/meme_4.6.0/src/libcommon_la-match.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,994 copying src/meme_4.6.0/src/read-mhmm.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:42,996 copying src/meme_4.6.0/src/pmp_bf -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,037 copying src/meme_4.6.0/src/libcommon_la-alphabet.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,039 copying src/meme_4.6.0/src/libcommon_la-hash_alph.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,042 copying src/meme_4.6.0/src/libcommon_la-metameme.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,044 copying src/meme_4.6.0/src/alphabet.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,046 copying src/meme_4.6.0/src/partition.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,048 copying src/meme_4.6.0/src/libcommon_la-substmatrix-table.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,051 copying src/meme_4.6.0/src/libcommon_la-data-block-reader.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,053 copying src/meme_4.6.0/src/meme_bin-mp.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,055 copying src/meme_4.6.0/src/reduce_alignment-reduce-alignment.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,057 copying src/meme_4.6.0/src/meme_bin-linked-list.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,059 copying src/meme_4.6.0/src/libcommon_la-fasta-io.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,061 copying src/meme_4.6.0/src/buffer.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,063 copying src/meme_4.6.0/src/glam2_motif.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,065 copying src/meme_4.6.0/src/string-match.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,066 copying src/meme_4.6.0/src/ceqlogo -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,098 copying src/meme_4.6.0/src/mast2txt -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,125 copying src/meme_4.6.0/src/libcommon_la-mhmm-state.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,127 copying src/meme_4.6.0/src/dir.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,129 copying src/meme_4.6.0/src/fitevd -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,132 copying src/meme_4.6.0/src/xsltproc_lite-xsltproc_lite.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,135 copying src/meme_4.6.0/src/string-list.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,137 copying src/meme_4.6.0/src/mhmm-state.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,140 copying src/meme_4.6.0/src/libcommon_la-io.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,142 copying src/meme_4.6.0/src/mhmm-state.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,144 copying src/meme_4.6.0/src/libcommon_la-hash_table.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,147 copying src/meme_4.6.0/src/mast -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,185 copying src/meme_4.6.0/src/getsize.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,187 copying src/meme_4.6.0/src/gomo-ranksum_test.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,190 copying src/meme_4.6.0/src/glam2mask-glam2_util.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,192 copying src/meme_4.6.0/src/libcommon_la-order.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,194 copying src/meme_4.6.0/src/libcommon_la-motifs.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,196 copying src/meme_4.6.0/src/glam2scan-glam2_scan_init.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,198 copying src/meme_4.6.0/src/compute_prior_dist-compute-prior-dist.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,200 copying src/meme_4.6.0/src/qvalue -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,203 copying src/meme_4.6.0/src/spamo-matches.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,206 copying src/meme_4.6.0/src/array.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,209 copying src/meme_4.6.0/src/background.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,211 copying src/meme_4.6.0/src/alphtype-alphtype.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,213 copying src/meme_4.6.0/src/read_csv.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,215 copying src/meme_4.6.0/src/io.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,217 copying src/meme_4.6.0/src/karlin.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,219 copying src/meme_4.6.0/src/prior-dist.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,221 copying src/meme_4.6.0/src/psp.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,223 copying src/meme_4.6.0/src/glam2_util.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,227 copying src/meme_4.6.0/src/libcommon_la-mhmm.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,229 copying src/meme_4.6.0/src/mast-diagram.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,232 copying src/meme_4.6.0/src/spamo-cisml.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,236 copying src/meme_4.6.0/src/branching_search.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,239 copying src/meme_4.6.0/src/libcommon_la-seq-reader-from-fasta.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,241 copying src/meme_4.6.0/src/reconcile-tree-alignment -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,248 copying src/meme_4.6.0/src/libcommon_la-binary-search.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,250 copying src/meme_4.6.0/src/glam2_alignment.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,253 copying src/meme_4.6.0/src/glam2_args.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,255 copying src/meme_4.6.0/src/red-black-tree.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,258 copying src/meme_4.6.0/src/read_seq_file.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,260 copying src/meme_4.6.0/src/fimo -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,307 copying src/meme_4.6.0/src/object-list.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,310 copying src/meme_4.6.0/src/meme_util.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,313 copying src/meme_4.6.0/src/empirical-qvalue.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,316 copying src/meme_4.6.0/src/libcommon_la-write-mhmm.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,319 copying src/meme_4.6.0/src/discretize.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,322 copying src/meme_4.6.0/src/meme_bin-meme_util.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,325 copying src/meme_4.6.0/src/libcommon_la-xml-out.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,327 copying src/meme_4.6.0/src/glam2scan -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,331 copying src/meme_4.6.0/src/mhmmscan.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,334 copying src/meme_4.6.0/src/banner.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,336 copying src/meme_4.6.0/src/libcommon_la-fitevd.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,338 creating build/src/meme_4.6.0/src/filters 2023-09-11T02:11:43,339 copying src/meme_4.6.0/src/filters/Makefile.am -> build/src/meme_4.6.0/src/filters 2023-09-11T02:11:43,341 copying src/meme_4.6.0/src/filters/Makefile.in -> build/src/meme_4.6.0/src/filters 2023-09-11T02:11:43,344 creating build/src/meme_4.6.0/src/filters/dust 2023-09-11T02:11:43,345 copying src/meme_4.6.0/src/filters/dust/dust.o -> build/src/meme_4.6.0/src/filters/dust 2023-09-11T02:11:43,347 copying src/meme_4.6.0/src/filters/dust/tust.c -> build/src/meme_4.6.0/src/filters/dust 2023-09-11T02:11:43,350 copying src/meme_4.6.0/src/filters/dust/dust.c -> build/src/meme_4.6.0/src/filters/dust 2023-09-11T02:11:43,352 copying src/meme_4.6.0/src/filters/dust/tust.o -> build/src/meme_4.6.0/src/filters/dust 2023-09-11T02:11:43,354 copying src/meme_4.6.0/src/filters/dust/getfa.o -> build/src/meme_4.6.0/src/filters/dust 2023-09-11T02:11:43,357 copying src/meme_4.6.0/src/filters/dust/Makefile.am -> build/src/meme_4.6.0/src/filters/dust 2023-09-11T02:11:43,359 copying src/meme_4.6.0/src/filters/dust/Makefile.in -> build/src/meme_4.6.0/src/filters/dust 2023-09-11T02:11:43,361 copying src/meme_4.6.0/src/filters/dust/getfa.h -> build/src/meme_4.6.0/src/filters/dust 2023-09-11T02:11:43,363 copying src/meme_4.6.0/src/filters/dust/dust -> build/src/meme_4.6.0/src/filters/dust 2023-09-11T02:11:43,366 copying src/meme_4.6.0/src/filters/dust/getfa.c -> build/src/meme_4.6.0/src/filters/dust 2023-09-11T02:11:43,368 copying src/meme_4.6.0/src/filters/dust/Makefile -> build/src/meme_4.6.0/src/filters/dust 2023-09-11T02:11:43,371 creating build/src/meme_4.6.0/src/filters/dust/.deps 2023-09-11T02:11:43,372 copying src/meme_4.6.0/src/filters/dust/.deps/dust.Po -> build/src/meme_4.6.0/src/filters/dust/.deps 2023-09-11T02:11:43,374 copying src/meme_4.6.0/src/filters/dust/.deps/getfa.Po -> build/src/meme_4.6.0/src/filters/dust/.deps 2023-09-11T02:11:43,376 copying src/meme_4.6.0/src/filters/dust/.deps/tust.Po -> build/src/meme_4.6.0/src/filters/dust/.deps 2023-09-11T02:11:43,378 copying src/meme_4.6.0/src/filters/dust/README -> build/src/meme_4.6.0/src/filters/dust 2023-09-11T02:11:43,380 copying src/meme_4.6.0/src/filters/Makefile -> build/src/meme_4.6.0/src/filters 2023-09-11T02:11:43,383 creating build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,384 copying src/meme_4.6.0/src/filters/purge/afnio.o -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,386 copying src/meme_4.6.0/src/filters/purge/block.o -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,389 copying src/meme_4.6.0/src/filters/purge/afnio.c -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,391 copying src/meme_4.6.0/src/filters/purge/residues.h -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,393 copying src/meme_4.6.0/src/filters/purge/mlist.c -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,395 copying src/meme_4.6.0/src/filters/purge/mheap.h -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,397 copying src/meme_4.6.0/src/filters/purge/gblast.o -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,400 copying src/meme_4.6.0/src/filters/purge/pmain.c -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,402 copying src/meme_4.6.0/src/filters/purge/Makefile.am -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,404 copying src/meme_4.6.0/src/filters/purge/karlin.o -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,406 copying src/meme_4.6.0/src/filters/purge/stdinc.h -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,408 copying src/meme_4.6.0/src/filters/purge/purge.c -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,411 copying src/meme_4.6.0/src/filters/purge/Makefile.in -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,413 copying src/meme_4.6.0/src/filters/purge/pairaln.h -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,415 copying src/meme_4.6.0/src/filters/purge/dheap.h -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,417 copying src/meme_4.6.0/src/filters/purge/mheap.c -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,419 copying src/meme_4.6.0/src/filters/purge/seqset.o -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,421 copying src/meme_4.6.0/src/filters/purge/sequence.c -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,424 copying src/meme_4.6.0/src/filters/purge/block.h -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,426 copying src/meme_4.6.0/src/filters/purge/mlist.o -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,428 copying src/meme_4.6.0/src/filters/purge/random.o -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,430 copying src/meme_4.6.0/src/filters/purge/seqset.c -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,433 copying src/meme_4.6.0/src/filters/purge/pairaln.o -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,435 copying src/meme_4.6.0/src/filters/purge/random.h -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,438 copying src/meme_4.6.0/src/filters/purge/afnio.h -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,440 copying src/meme_4.6.0/src/filters/purge/gblast.c -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,442 copying src/meme_4.6.0/src/filters/purge/Makefile -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,445 copying src/meme_4.6.0/src/filters/purge/alphabet.h -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,447 copying src/meme_4.6.0/src/filters/purge/alphabet.o -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,449 copying src/meme_4.6.0/src/filters/purge/sequence.h -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,451 creating build/src/meme_4.6.0/src/filters/purge/.deps 2023-09-11T02:11:43,452 copying src/meme_4.6.0/src/filters/purge/.deps/pmain.Po -> build/src/meme_4.6.0/src/filters/purge/.deps 2023-09-11T02:11:43,455 copying src/meme_4.6.0/src/filters/purge/.deps/afnio.Po -> build/src/meme_4.6.0/src/filters/purge/.deps 2023-09-11T02:11:43,457 copying src/meme_4.6.0/src/filters/purge/.deps/gblast.Po -> build/src/meme_4.6.0/src/filters/purge/.deps 2023-09-11T02:11:43,460 copying src/meme_4.6.0/src/filters/purge/.deps/pairaln.Po -> build/src/meme_4.6.0/src/filters/purge/.deps 2023-09-11T02:11:43,462 copying src/meme_4.6.0/src/filters/purge/.deps/alphabet.Po -> build/src/meme_4.6.0/src/filters/purge/.deps 2023-09-11T02:11:43,465 copying src/meme_4.6.0/src/filters/purge/.deps/mlist.Po -> build/src/meme_4.6.0/src/filters/purge/.deps 2023-09-11T02:11:43,467 copying src/meme_4.6.0/src/filters/purge/.deps/karlin.Po -> build/src/meme_4.6.0/src/filters/purge/.deps 2023-09-11T02:11:43,469 copying src/meme_4.6.0/src/filters/purge/.deps/block.Po -> build/src/meme_4.6.0/src/filters/purge/.deps 2023-09-11T02:11:43,472 copying src/meme_4.6.0/src/filters/purge/.deps/purge.Po -> build/src/meme_4.6.0/src/filters/purge/.deps 2023-09-11T02:11:43,474 copying src/meme_4.6.0/src/filters/purge/.deps/sequence.Po -> build/src/meme_4.6.0/src/filters/purge/.deps 2023-09-11T02:11:43,476 copying src/meme_4.6.0/src/filters/purge/.deps/mheap.Po -> build/src/meme_4.6.0/src/filters/purge/.deps 2023-09-11T02:11:43,479 copying src/meme_4.6.0/src/filters/purge/.deps/seqset.Po -> build/src/meme_4.6.0/src/filters/purge/.deps 2023-09-11T02:11:43,481 copying src/meme_4.6.0/src/filters/purge/.deps/dheap.Po -> build/src/meme_4.6.0/src/filters/purge/.deps 2023-09-11T02:11:43,483 copying src/meme_4.6.0/src/filters/purge/.deps/random.Po -> build/src/meme_4.6.0/src/filters/purge/.deps 2023-09-11T02:11:43,485 copying src/meme_4.6.0/src/filters/purge/seqset.h -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,487 copying src/meme_4.6.0/src/filters/purge/sequence.o -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,489 copying src/meme_4.6.0/src/filters/purge/random.c -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,491 copying src/meme_4.6.0/src/filters/purge/dheap.c -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,493 copying src/meme_4.6.0/src/filters/purge/block.c -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,496 copying src/meme_4.6.0/src/filters/purge/dheap.o -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,498 copying src/meme_4.6.0/src/filters/purge/purge.o -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,500 copying src/meme_4.6.0/src/filters/purge/purge.h -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,502 copying src/meme_4.6.0/src/filters/purge/mheap.o -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,504 copying src/meme_4.6.0/src/filters/purge/alphabet.c -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,506 copying src/meme_4.6.0/src/filters/purge/pmain.o -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,509 copying src/meme_4.6.0/src/filters/purge/purge -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,513 copying src/meme_4.6.0/src/filters/purge/README -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,515 copying src/meme_4.6.0/src/filters/purge/karlin.c -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,518 copying src/meme_4.6.0/src/filters/purge/pairaln.c -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,520 copying src/meme_4.6.0/src/filters/purge/gblast.h -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,522 copying src/meme_4.6.0/src/filters/purge/mlist.h -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,524 copying src/meme_4.6.0/src/filters/purge/karlin.h -> build/src/meme_4.6.0/src/filters/purge 2023-09-11T02:11:43,526 copying src/meme_4.6.0/src/libcommon_la-write-mhmm.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,528 copying src/meme_4.6.0/src/glam2scan-glam2_util.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,531 copying src/meme_4.6.0/src/libcommon_la-motifs.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,534 copying src/meme_4.6.0/src/build-hmm.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,536 copying src/meme_4.6.0/src/gendb.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,539 copying src/meme_4.6.0/src/ama-ama_scan.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,541 creating build/src/meme_4.6.0/src/parallel 2023-09-11T02:11:43,542 copying src/meme_4.6.0/src/parallel/Makefile.am -> build/src/meme_4.6.0/src/parallel 2023-09-11T02:11:43,544 copying src/meme_4.6.0/src/parallel/Makefile.in -> build/src/meme_4.6.0/src/parallel 2023-09-11T02:11:43,549 copying src/meme_4.6.0/src/parallel/Makefile -> build/src/meme_4.6.0/src/parallel 2023-09-11T02:11:43,552 creating build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,553 copying src/meme_4.6.0/src/parallel/.deps/meme_p-starts.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,555 copying src/meme_4.6.0/src/parallel/.deps/meme_p-oops.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,557 copying src/meme_4.6.0/src/parallel/.deps/meme_p-justlike.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,559 copying src/meme_4.6.0/src/parallel/.deps/meme_p-pssm-distr.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,560 copying src/meme_4.6.0/src/parallel/.deps/meme_p-read_seq_file.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,562 copying src/meme_4.6.0/src/parallel/.deps/meme_p-message.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,564 copying src/meme_4.6.0/src/parallel/.deps/meme_p-tcm.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,566 copying src/meme_4.6.0/src/parallel/.deps/meme_p-seed_diffs.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,568 copying src/meme_4.6.0/src/parallel/.deps/meme_p-logs.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,570 copying src/meme_4.6.0/src/parallel/.deps/meme_p-psp.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,572 copying src/meme_4.6.0/src/parallel/.deps/meme_p-banner.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,573 copying src/meme_4.6.0/src/parallel/.deps/meme_p-subseq7.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,576 copying src/meme_4.6.0/src/parallel/.deps/meme_p-branching_search.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,578 copying src/meme_4.6.0/src/parallel/.deps/meme_p-calculate_p_y.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,580 copying src/meme_4.6.0/src/parallel/.deps/meme_p-meme_util.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,582 copying src/meme_4.6.0/src/parallel/.deps/meme_p-verbosity.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,584 copying src/meme_4.6.0/src/parallel/.deps/meme_p-llr.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,585 copying src/meme_4.6.0/src/parallel/.deps/meme_p-likelihood.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,587 copying src/meme_4.6.0/src/parallel/.deps/meme_p-sp_matrix.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,589 copying src/meme_4.6.0/src/parallel/.deps/meme_p-mp.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,591 copying src/meme_4.6.0/src/parallel/.deps/meme_p-seed.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,593 copying src/meme_4.6.0/src/parallel/.deps/meme_p-display.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,594 copying src/meme_4.6.0/src/parallel/.deps/meme_p-init.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,596 copying src/meme_4.6.0/src/parallel/.deps/meme_p-prior.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,598 copying src/meme_4.6.0/src/parallel/.deps/meme_p-partition.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,600 copying src/meme_4.6.0/src/parallel/.deps/meme_p-regress.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,602 copying src/meme_4.6.0/src/parallel/.deps/meme_p-meme.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,604 copying src/meme_4.6.0/src/parallel/.deps/meme_p-seq2theta.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,606 copying src/meme_4.6.0/src/parallel/.deps/meme_p-discretize.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,607 copying src/meme_4.6.0/src/parallel/.deps/meme_p-meme-print-html.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,609 copying src/meme_4.6.0/src/parallel/.deps/meme_p-dpalign.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,611 copying src/meme_4.6.0/src/parallel/.deps/meme_p-em.Po -> build/src/meme_4.6.0/src/parallel/.deps 2023-09-11T02:11:43,613 copying src/meme_4.6.0/src/regress.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,615 copying src/meme_4.6.0/src/glam2_output.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,617 copying src/meme_4.6.0/src/message.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,619 copying src/meme_4.6.0/src/libcommon_la-regress.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,621 copying src/meme_4.6.0/src/glam2_scan_init.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,623 copying src/meme_4.6.0/src/read_seq_file.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,625 copying src/meme_4.6.0/src/meme_xml_html-meme-print-html.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,627 copying src/meme_4.6.0/src/dpalign.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,629 copying src/meme_4.6.0/src/evomodel_with_loss.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,632 copying src/meme_4.6.0/src/spamo-spamo.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,635 copying src/meme_4.6.0/src/spamo-spamo-scan.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,637 copying src/meme_4.6.0/src/motiph.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,640 copying src/meme_4.6.0/src/star.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,642 copying src/meme_4.6.0/src/libcommon_la-prior-dist.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,644 copying src/meme_4.6.0/src/glam2_scan_output.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,646 copying src/meme_4.6.0/src/meme-xml-html -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,648 copying src/meme_4.6.0/src/libcommon_la-dp.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,651 copying src/meme_4.6.0/src/libcommon_la-logodds.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,652 copying src/meme_4.6.0/src/log-hmm -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,684 copying src/meme_4.6.0/src/metameme.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,686 copying src/meme_4.6.0/src/data-block-reader.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,688 copying src/meme_4.6.0/src/read-mhmm.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,691 copying src/meme_4.6.0/src/tree -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,695 copying src/meme_4.6.0/src/qvalue-qvalue.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,698 copying src/meme_4.6.0/src/spamo-spamo-cisml.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,700 copying src/meme_4.6.0/src/seq-reader-from-fasta.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,703 copying src/meme_4.6.0/src/glam2_motif.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,705 copying src/meme_4.6.0/src/libcommon_la-evomodel_with_loss.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,707 copying src/meme_4.6.0/src/mhmme-mhmme.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,709 copying src/meme_4.6.0/src/fasta-io.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,712 copying src/meme_4.6.0/src/reduce-alignment.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,714 copying src/meme_4.6.0/src/libcommon_la-data-block-reader.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,716 copying src/meme_4.6.0/src/libcommon_la-cisml.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,717 copying src/meme_4.6.0/src/glam2_init.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,719 copying src/meme_4.6.0/src/libcommon_la-regress.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,721 copying src/meme_4.6.0/src/oops.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,724 copying src/meme_4.6.0/src/tomtom-tomtom.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,727 copying src/meme_4.6.0/src/macros.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,730 copying src/meme_4.6.0/src/libcommon_la-array.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,732 copying src/meme_4.6.0/src/karlin.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,734 copying src/meme_4.6.0/src/glam2-glam2_output.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,736 copying src/meme_4.6.0/src/pmp_bf-pmp_bf.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,739 copying src/meme_4.6.0/src/libcommon_la-karlin.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,741 copying src/meme_4.6.0/src/ceqlogo.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,745 copying src/meme_4.6.0/src/libcommon_la-scored-sites.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,747 copying src/meme_4.6.0/src/glam2_scan_init.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,749 copying src/meme_4.6.0/src/ame -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,782 copying src/meme_4.6.0/src/utest.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,784 copying src/meme_4.6.0/src/clustalw_io-clustalw-io.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,787 copying src/meme_4.6.0/src/libcommon.la -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,788 copying src/meme_4.6.0/src/array-list.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,790 copying src/meme_4.6.0/src/libcommon_la-ceqlogo.lo -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,792 copying src/meme_4.6.0/src/hash.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,794 copying src/meme_4.6.0/src/tomtom -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,825 copying src/meme_4.6.0/src/glam2-glam2_recode3_20comp.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,828 copying src/meme_4.6.0/src/spamo-output.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,831 copying src/meme_4.6.0/src/em.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,833 copying src/meme_4.6.0/src/meme_bin-em.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,836 copying src/meme_4.6.0/src/ama_scan.c -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,838 copying src/meme_4.6.0/src/glam2_output.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,840 copying src/meme_4.6.0/src/meme2images -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,880 copying src/meme_4.6.0/src/gendb-gendb.o -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,891 copying src/meme_4.6.0/src/cisml-dtd.h -> build/src/meme_4.6.0/src 2023-09-11T02:11:43,897 copying src/meme_4.6.0/Makefile.in -> build/src/meme_4.6.0 2023-09-11T02:11:43,905 copying src/meme_4.6.0/aclocal.m4 -> build/src/meme_4.6.0 2023-09-11T02:11:43,918 creating build/src/meme_4.6.0/tests 2023-09-11T02:11:43,921 creating build/src/meme_4.6.0/tests/web 2023-09-11T02:11:43,925 copying src/meme_4.6.0/tests/web/Makefile.am -> build/src/meme_4.6.0/tests/web 2023-09-11T02:11:44,144 copying src/meme_4.6.0/tests/web/Makefile.in -> build/src/meme_4.6.0/tests/web 2023-09-11T02:11:44,147 copying src/meme_4.6.0/tests/web/Makefile -> build/src/meme_4.6.0/tests/web 2023-09-11T02:11:44,149 creating build/src/meme_4.6.0/tests/clustalw2fasta 2023-09-11T02:11:44,150 copying src/meme_4.6.0/tests/clustalw2fasta/test.consensus.fasta -> build/src/meme_4.6.0/tests/clustalw2fasta 2023-09-11T02:11:44,152 copying src/meme_4.6.0/tests/clustalw2fasta/Makefile.am -> build/src/meme_4.6.0/tests/clustalw2fasta 2023-09-11T02:11:44,154 copying src/meme_4.6.0/tests/clustalw2fasta/Makefile.in -> build/src/meme_4.6.0/tests/clustalw2fasta 2023-09-11T02:11:44,157 copying src/meme_4.6.0/tests/clustalw2fasta/test.fasta -> build/src/meme_4.6.0/tests/clustalw2fasta 2023-09-11T02:11:44,159 copying src/meme_4.6.0/tests/clustalw2fasta/Makefile -> build/src/meme_4.6.0/tests/clustalw2fasta 2023-09-11T02:11:44,161 copying src/meme_4.6.0/tests/clustalw2fasta/test.nogap.fasta -> build/src/meme_4.6.0/tests/clustalw2fasta 2023-09-11T02:11:44,163 copying src/meme_4.6.0/tests/noq.s -> build/src/meme_4.6.0/tests 2023-09-11T02:11:44,165 creating build/src/meme_4.6.0/tests/motiph 2023-09-11T02:11:44,166 copying src/meme_4.6.0/tests/motiph/motiph.gff -> build/src/meme_4.6.0/tests/motiph 2023-09-11T02:11:44,168 copying src/meme_4.6.0/tests/motiph/spiked.fasta -> build/src/meme_4.6.0/tests/motiph 2023-09-11T02:11:44,170 copying src/meme_4.6.0/tests/motiph/Makefile.am -> build/src/meme_4.6.0/tests/motiph 2023-09-11T02:11:44,172 copying src/meme_4.6.0/tests/motiph/Makefile.in -> build/src/meme_4.6.0/tests/motiph 2023-09-11T02:11:44,174 copying src/meme_4.6.0/tests/motiph/spiked.aln -> build/src/meme_4.6.0/tests/motiph 2023-09-11T02:11:44,177 copying src/meme_4.6.0/tests/motiph/Makefile -> build/src/meme_4.6.0/tests/motiph 2023-09-11T02:11:44,180 copying src/meme_4.6.0/tests/motiph/shadow.gff -> build/src/meme_4.6.0/tests/motiph 2023-09-11T02:11:44,182 copying src/meme_4.6.0/tests/motiph/MCM1.meme.html -> build/src/meme_4.6.0/tests/motiph 2023-09-11T02:11:44,185 copying src/meme_4.6.0/tests/motiph/yeast.tree -> build/src/meme_4.6.0/tests/motiph 2023-09-11T02:11:44,186 copying src/meme_4.6.0/tests/motiph/motiph-motif23.gff -> build/src/meme_4.6.0/tests/motiph 2023-09-11T02:11:44,193 copying src/meme_4.6.0/tests/crp0.s -> build/src/meme_4.6.0/tests 2023-09-11T02:11:44,195 copying src/meme_4.6.0/tests/adh.s -> build/src/meme_4.6.0/tests 2023-09-11T02:11:44,198 copying src/meme_4.6.0/tests/mini-drosoph.s -> build/src/meme_4.6.0/tests 2023-09-11T02:11:44,209 copying src/meme_4.6.0/tests/farntrans5.s -> build/src/meme_4.6.0/tests 2023-09-11T02:11:44,213 creating build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,214 copying src/meme_4.6.0/tests/draw-mhmm/crp0.linear.spacer.gvz -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,216 copying src/meme_4.6.0/tests/draw-mhmm/Makefile.am -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,218 copying src/meme_4.6.0/tests/draw-mhmm/lipo.star.gvz -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,220 copying src/meme_4.6.0/tests/draw-mhmm/lipo.linear.fim.gvz -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,222 copying src/meme_4.6.0/tests/draw-mhmm/Makefile.in -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,224 copying src/meme_4.6.0/tests/draw-mhmm/lipo.linear.gvz -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,227 copying src/meme_4.6.0/tests/draw-mhmm/crp0.linear.fim.gvz -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,229 copying src/meme_4.6.0/tests/draw-mhmm/crp0.complete.spacer.gvz -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,231 copying src/meme_4.6.0/tests/draw-mhmm/lipo.complete.gvz -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,233 copying src/meme_4.6.0/tests/draw-mhmm/crp0.star.spacer.gvz -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,235 copying src/meme_4.6.0/tests/draw-mhmm/crp0.complete.gvz -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,237 copying src/meme_4.6.0/tests/draw-mhmm/crp0.complete.fim.gvz -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,239 copying src/meme_4.6.0/tests/draw-mhmm/lipo.complete.spacer.gvz -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,242 copying src/meme_4.6.0/tests/draw-mhmm/Makefile -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,244 copying src/meme_4.6.0/tests/draw-mhmm/crp0.linear.gvz -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,246 copying src/meme_4.6.0/tests/draw-mhmm/lipo.star.spacer.gvz -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,248 copying src/meme_4.6.0/tests/draw-mhmm/README -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,250 copying src/meme_4.6.0/tests/draw-mhmm/crp0.star.gvz -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,252 copying src/meme_4.6.0/tests/draw-mhmm/lipo.complete.fim.gvz -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,254 copying src/meme_4.6.0/tests/draw-mhmm/lipo.linear.spacer.gvz -> build/src/meme_4.6.0/tests/draw-mhmm 2023-09-11T02:11:44,257 copying src/meme_4.6.0/tests/Makefile.am -> build/src/meme_4.6.0/tests 2023-09-11T02:11:44,259 copying src/meme_4.6.0/tests/Makefile.in -> build/src/meme_4.6.0/tests 2023-09-11T02:11:44,262 creating build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,263 copying src/meme_4.6.0/tests/meme/meme.lipocalin.zoops -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,267 copying src/meme_4.6.0/tests/meme/meme.INO_up800.oops -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,270 copying src/meme_4.6.0/tests/meme/meme.crp0.tcm -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,279 copying src/meme_4.6.0/tests/meme/meme.adh.tcm -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,294 copying src/meme_4.6.0/tests/meme/meme.adh.oops -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,298 copying src/meme_4.6.0/tests/meme/meme.crp0.zoops -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,302 copying src/meme_4.6.0/tests/meme/Makefile.am -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,304 copying src/meme_4.6.0/tests/meme/meme.adh.zoops -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,309 copying src/meme_4.6.0/tests/meme/Makefile.in -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,312 copying src/meme_4.6.0/tests/meme/meme.psp_test.zoops -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,315 copying src/meme_4.6.0/tests/meme/meme.lex0.zoops -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,317 copying src/meme_4.6.0/tests/meme/meme.farntrans5.zoops -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,320 copying src/meme_4.6.0/tests/meme/meme.INO_up800.zoops -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,323 copying src/meme_4.6.0/tests/meme/Makefile -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,325 copying src/meme_4.6.0/tests/meme/meme.farntrans5.oops -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,328 copying src/meme_4.6.0/tests/meme/meme.crp0.oops -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,331 copying src/meme_4.6.0/tests/meme/meme.lipocalin.tcm -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,334 copying src/meme_4.6.0/tests/meme/meme.farntrans5.tcm -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,336 copying src/meme_4.6.0/tests/meme/meme.lipocalin.oops -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,339 copying src/meme_4.6.0/tests/meme/meme.INO_up800.tcm -> build/src/meme_4.6.0/tests/meme 2023-09-11T02:11:44,342 creating build/src/meme_4.6.0/tests/fasta-center 2023-09-11T02:11:44,343 copying src/meme_4.6.0/tests/fasta-center/Makefile.am -> build/src/meme_4.6.0/tests/fasta-center 2023-09-11T02:11:44,345 copying src/meme_4.6.0/tests/fasta-center/Makefile.in -> build/src/meme_4.6.0/tests/fasta-center 2023-09-11T02:11:44,348 copying src/meme_4.6.0/tests/fasta-center/mid3.fasta -> build/src/meme_4.6.0/tests/fasta-center 2023-09-11T02:11:44,350 copying src/meme_4.6.0/tests/fasta-center/Makefile -> build/src/meme_4.6.0/tests/fasta-center 2023-09-11T02:11:44,352 copying src/meme_4.6.0/tests/fasta-center/README -> build/src/meme_4.6.0/tests/fasta-center 2023-09-11T02:11:44,354 copying src/meme_4.6.0/tests/lipocalin.s -> build/src/meme_4.6.0/tests 2023-09-11T02:11:44,356 copying src/meme_4.6.0/tests/Makefile -> build/src/meme_4.6.0/tests 2023-09-11T02:11:44,359 creating build/src/meme_4.6.0/tests/gomo 2023-09-11T02:11:44,360 copying src/meme_4.6.0/tests/gomo/gomo.smallthreshold.txt -> build/src/meme_4.6.0/tests/gomo 2023-09-11T02:11:44,362 copying src/meme_4.6.0/tests/gomo/gomo.multipeSpecies.txt -> build/src/meme_4.6.0/tests/gomo 2023-09-11T02:11:44,364 copying src/meme_4.6.0/tests/gomo/ama.withMaxodds.xml -> build/src/meme_4.6.0/tests/gomo 2023-09-11T02:11:44,366 copying src/meme_4.6.0/tests/gomo/Makefile.am -> build/src/meme_4.6.0/tests/gomo 2023-09-11T02:11:44,368 copying src/meme_4.6.0/tests/gomo/motif.meme -> build/src/meme_4.6.0/tests/gomo 2023-09-11T02:11:44,370 copying src/meme_4.6.0/tests/gomo/Makefile.in -> build/src/meme_4.6.0/tests/gomo 2023-09-11T02:11:44,373 copying src/meme_4.6.0/tests/gomo/ama.zscoring.xml -> build/src/meme_4.6.0/tests/gomo 2023-09-11T02:11:44,376 copying src/meme_4.6.0/tests/gomo/seqs.bg -> build/src/meme_4.6.0/tests/gomo 2023-09-11T02:11:44,378 copying src/meme_4.6.0/tests/gomo/seqs_red.fasta -> build/src/meme_4.6.0/tests/gomo 2023-09-11T02:11:44,379 copying src/meme_4.6.0/tests/gomo/Makefile -> build/src/meme_4.6.0/tests/gomo 2023-09-11T02:11:44,382 copying src/meme_4.6.0/tests/gomo/ama.redundant.xml -> build/src/meme_4.6.0/tests/gomo 2023-09-11T02:11:44,384 copying src/meme_4.6.0/tests/gomo/seqs.norc.bg -> build/src/meme_4.6.0/tests/gomo 2023-09-11T02:11:44,387 copying src/meme_4.6.0/tests/gomo/ama.nozscoring.xml -> build/src/meme_4.6.0/tests/gomo 2023-09-11T02:11:44,390 copying src/meme_4.6.0/tests/gomo/seqs.fasta -> build/src/meme_4.6.0/tests/gomo 2023-09-11T02:11:44,392 copying src/meme_4.6.0/tests/gomo/GO2Gene.map.csv -> build/src/meme_4.6.0/tests/gomo 2023-09-11T02:11:44,394 creating build/src/meme_4.6.0/tests/mcast 2023-09-11T02:11:44,395 copying src/meme_4.6.0/tests/mcast/Makefile.am -> build/src/meme_4.6.0/tests/mcast 2023-09-11T02:11:44,397 copying src/meme_4.6.0/tests/mcast/Makefile.in -> build/src/meme_4.6.0/tests/mcast 2023-09-11T02:11:44,399 copying src/meme_4.6.0/tests/mcast/Makefile -> build/src/meme_4.6.0/tests/mcast 2023-09-11T02:11:44,401 copying src/meme_4.6.0/tests/mcast/lex0.zoops.mcast -> build/src/meme_4.6.0/tests/mcast 2023-09-11T02:11:44,404 creating build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,405 copying src/meme_4.6.0/tests/mhmms/lipo.linear.spacer.all.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,407 copying src/meme_4.6.0/tests/mhmms/lipo.complete.fim.all.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,409 copying src/meme_4.6.0/tests/mhmms/crp0.complete.spacer.single.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,412 copying src/meme_4.6.0/tests/mhmms/crp0.star.spacer.all.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,414 copying src/meme_4.6.0/tests/mhmms/lipo.star.spacer.single.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,417 copying src/meme_4.6.0/tests/mhmms/lipo.complete.single.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,419 copying src/meme_4.6.0/tests/mhmms/crp0.complete.fim.single.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,422 copying src/meme_4.6.0/tests/mhmms/lipo.star.spacer.all.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,424 copying src/meme_4.6.0/tests/mhmms/Makefile.am -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,426 copying src/meme_4.6.0/tests/mhmms/r1635.fasta -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,428 copying src/meme_4.6.0/tests/mhmms/lipo.linear.fim.single.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,431 copying src/meme_4.6.0/tests/mhmms/lipo.star.single.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,434 copying src/meme_4.6.0/tests/mhmms/lipo.complete.fim.single.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,436 copying src/meme_4.6.0/tests/mhmms/crp0.linear.all.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,439 copying src/meme_4.6.0/tests/mhmms/Makefile.in -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,441 copying src/meme_4.6.0/tests/mhmms/r1584.fasta -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,443 copying src/meme_4.6.0/tests/mhmms/lipo.linear.spacer.single.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,445 copying src/meme_4.6.0/tests/mhmms/crp0.star.single.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,448 copying src/meme_4.6.0/tests/mhmms/r1635.global.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,451 copying src/meme_4.6.0/tests/mhmms/crp0.linear.single.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,453 copying src/meme_4.6.0/tests/mhmms/lipo.star.all.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,455 copying src/meme_4.6.0/tests/mhmms/crp0.complete.all.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,458 copying src/meme_4.6.0/tests/mhmms/lipo.linear.single.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,460 copying src/meme_4.6.0/tests/mhmms/crp0.star.spacer.single.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,463 copying src/meme_4.6.0/tests/mhmms/r1584.hmm -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,467 copying src/meme_4.6.0/tests/mhmms/crp0.linear.spacer.all.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,469 copying src/meme_4.6.0/tests/mhmms/crp0.complete.fim.all.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,471 copying src/meme_4.6.0/tests/mhmms/crp0.star.all.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,473 copying src/meme_4.6.0/tests/mhmms/Makefile -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,476 copying src/meme_4.6.0/tests/mhmms/lipo.linear.fim.all.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,477 copying src/meme_4.6.0/tests/mhmms/lipo.complete.spacer.single.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,480 copying src/meme_4.6.0/tests/mhmms/r1584.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,482 copying src/meme_4.6.0/tests/mhmms/lipo.complete.spacer.all.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,484 copying src/meme_4.6.0/tests/mhmms/lipo.complete.all.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,486 copying src/meme_4.6.0/tests/mhmms/crp0.linear.spacer.single.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,488 copying src/meme_4.6.0/tests/mhmms/crp0.complete.single.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,490 copying src/meme_4.6.0/tests/mhmms/r1635.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,492 copying src/meme_4.6.0/tests/mhmms/lipo.linear.all.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,494 copying src/meme_4.6.0/tests/mhmms/r1635.maxseqs.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,496 copying src/meme_4.6.0/tests/mhmms/crp0.linear.fim.single.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,499 copying src/meme_4.6.0/tests/mhmms/crp0.complete.spacer.all.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,500 copying src/meme_4.6.0/tests/mhmms/crp0.linear.fim.all.mhmms -> build/src/meme_4.6.0/tests/mhmms 2023-09-11T02:11:44,502 creating build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,503 copying src/meme_4.6.0/tests/mhmm/crp0.complete.spacer.mhmm -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,507 copying src/meme_4.6.0/tests/mhmm/crp0.linear.spacer.mhmm -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,509 copying src/meme_4.6.0/tests/mhmm/lipo.linear.mhmm -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,512 copying src/meme_4.6.0/tests/mhmm/Makefile.am -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,514 copying src/meme_4.6.0/tests/mhmm/lipo.star.spacer.mhmm -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,517 copying src/meme_4.6.0/tests/mhmm/Makefile.in -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,519 copying src/meme_4.6.0/tests/mhmm/lipo.complete.spacer.mhmm -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,522 copying src/meme_4.6.0/tests/mhmm/crp0.complete.fim.mhmm -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,525 copying src/meme_4.6.0/tests/mhmm/crp0.star.spacer.mhmm -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,527 copying src/meme_4.6.0/tests/mhmm/Makefile -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,529 copying src/meme_4.6.0/tests/mhmm/crp0.linear.fim.mhmm -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,532 copying src/meme_4.6.0/tests/mhmm/lipo.complete.fim.mhmm -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,534 copying src/meme_4.6.0/tests/mhmm/lipo.linear.spacer.mhmm -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,537 copying src/meme_4.6.0/tests/mhmm/crp0.complete.mhmm -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,540 copying src/meme_4.6.0/tests/mhmm/README -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,542 copying src/meme_4.6.0/tests/mhmm/lipo.star.mhmm -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,545 copying src/meme_4.6.0/tests/mhmm/crp0.linear.mhmm -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,547 copying src/meme_4.6.0/tests/mhmm/lipo.linear.fim.mhmm -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,550 copying src/meme_4.6.0/tests/mhmm/crp0.star.mhmm -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,552 copying src/meme_4.6.0/tests/mhmm/lipo.complete.mhmm -> build/src/meme_4.6.0/tests/mhmm 2023-09-11T02:11:44,555 creating build/src/meme_4.6.0/tests/scaffold 2023-09-11T02:11:44,556 copying src/meme_4.6.0/tests/scaffold/lipo.fasta -> build/src/meme_4.6.0/tests/scaffold 2023-09-11T02:11:44,558 copying src/meme_4.6.0/tests/scaffold/Makefile.am -> build/src/meme_4.6.0/tests/scaffold 2023-09-11T02:11:44,560 copying src/meme_4.6.0/tests/scaffold/Makefile.in -> build/src/meme_4.6.0/tests/scaffold 2023-09-11T02:11:44,562 copying src/meme_4.6.0/tests/scaffold/crp0.prior -> build/src/meme_4.6.0/tests/scaffold 2023-09-11T02:11:44,564 copying src/meme_4.6.0/tests/scaffold/lipo.meme-io -> build/src/meme_4.6.0/tests/scaffold 2023-09-11T02:11:44,567 copying src/meme_4.6.0/tests/scaffold/crp0.fasta -> build/src/meme_4.6.0/tests/scaffold 2023-09-11T02:11:44,569 copying src/meme_4.6.0/tests/scaffold/lipo.prior -> build/src/meme_4.6.0/tests/scaffold 2023-09-11T02:11:44,571 copying src/meme_4.6.0/tests/scaffold/Makefile -> build/src/meme_4.6.0/tests/scaffold 2023-09-11T02:11:44,573 copying src/meme_4.6.0/tests/scaffold/crp0.meme-io -> build/src/meme_4.6.0/tests/scaffold 2023-09-11T02:11:44,575 creating build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,576 copying src/meme_4.6.0/tests/common/noq.s -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,578 copying src/meme_4.6.0/tests/common/crp0.s -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,580 copying src/meme_4.6.0/tests/common/yeast.nc.6.freq -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,584 copying src/meme_4.6.0/tests/common/adh.s -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,587 copying src/meme_4.6.0/tests/common/lipo.fasta -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,589 copying src/meme_4.6.0/tests/common/uprot.freq -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,591 copying src/meme_4.6.0/tests/common/crp0-test.fasta -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,593 copying src/meme_4.6.0/tests/common/sample.meme -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,596 copying src/meme_4.6.0/tests/common/mini-drosoph.s -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,605 copying src/meme_4.6.0/tests/common/farntrans5.s -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,607 copying src/meme_4.6.0/tests/common/lipo.meme.html -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,611 copying src/meme_4.6.0/tests/common/Makefile.am -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,613 copying src/meme_4.6.0/tests/common/Makefile.in -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,616 copying src/meme_4.6.0/tests/common/lipocalin.s -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,617 copying src/meme_4.6.0/tests/common/simple.aln -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,619 copying src/meme_4.6.0/tests/common/psp_test.s -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,622 copying src/meme_4.6.0/tests/common/lipo-test.fasta -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,624 copying src/meme_4.6.0/tests/common/crp0.fasta -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,626 copying src/meme_4.6.0/tests/common/Makefile -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,628 copying src/meme_4.6.0/tests/common/yeast.nc.3.freq -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,630 copying src/meme_4.6.0/tests/common/nr.freq -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,632 copying src/meme_4.6.0/tests/common/yeast.nc.1.freq -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,634 copying src/meme_4.6.0/tests/common/crp0.meme.html -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,637 copying src/meme_4.6.0/tests/common/nt.freq -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,639 copying src/meme_4.6.0/tests/common/lex0.s -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,641 copying src/meme_4.6.0/tests/common/psp_test.psp -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,645 copying src/meme_4.6.0/tests/common/INO_up800.s -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,647 copying src/meme_4.6.0/tests/common/test_tree.txt -> build/src/meme_4.6.0/tests/common 2023-09-11T02:11:44,649 creating build/src/meme_4.6.0/tests/psp-gen 2023-09-11T02:11:44,650 copying src/meme_4.6.0/tests/psp-gen/Makefile.am -> build/src/meme_4.6.0/tests/psp-gen 2023-09-11T02:11:44,652 copying src/meme_4.6.0/tests/psp-gen/Makefile.in -> build/src/meme_4.6.0/tests/psp-gen 2023-09-11T02:11:44,654 copying src/meme_4.6.0/tests/psp-gen/one-peak-protein.psp -> build/src/meme_4.6.0/tests/psp-gen 2023-09-11T02:11:44,656 copying src/meme_4.6.0/tests/psp-gen/one-peak-dna-revcomp.psp -> build/src/meme_4.6.0/tests/psp-gen 2023-09-11T02:11:44,658 copying src/meme_4.6.0/tests/psp-gen/one-peak-dna.fasta -> build/src/meme_4.6.0/tests/psp-gen 2023-09-11T02:11:44,660 copying src/meme_4.6.0/tests/psp-gen/all-A.fasta -> build/src/meme_4.6.0/tests/psp-gen 2023-09-11T02:11:44,662 copying src/meme_4.6.0/tests/psp-gen/one-peak-protein.fasta -> build/src/meme_4.6.0/tests/psp-gen 2023-09-11T02:11:44,664 copying src/meme_4.6.0/tests/psp-gen/Makefile -> build/src/meme_4.6.0/tests/psp-gen 2023-09-11T02:11:44,666 copying src/meme_4.6.0/tests/psp-gen/README -> build/src/meme_4.6.0/tests/psp-gen 2023-09-11T02:11:44,668 creating build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,669 copying src/meme_4.6.0/tests/mast/mast.lipocalin.tcm -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,671 copying src/meme_4.6.0/tests/mast/mast.INO_up800.oops -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,674 copying src/meme_4.6.0/tests/mast/mast.adh.oops.mini-drosoph.s -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,676 copying src/meme_4.6.0/tests/mast/mast.crp0.zoops -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,679 copying src/meme_4.6.0/tests/mast/mast.adh.zoops -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,681 copying src/meme_4.6.0/tests/mast/Makefile.am -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,683 copying src/meme_4.6.0/tests/mast/mast.lipocalin.oops -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,686 copying src/meme_4.6.0/tests/mast/Makefile.in -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,688 copying src/meme_4.6.0/tests/mast/mast.crp0.oops -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,691 copying src/meme_4.6.0/tests/mast/mast.farntrans5.oops -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,693 copying src/meme_4.6.0/tests/mast/mast.adh.tcm -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,696 copying src/meme_4.6.0/tests/mast/mast.adh.zoops.mini-drosoph.s -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,698 copying src/meme_4.6.0/tests/mast/Makefile -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,700 copying src/meme_4.6.0/tests/mast/mast.lipocalin.zoops -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,703 copying src/meme_4.6.0/tests/mast/mast.adh.oops -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,706 copying src/meme_4.6.0/tests/mast/mast.INO_up800.tcm -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,708 copying src/meme_4.6.0/tests/mast/mast.farntrans5.tcm -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,711 copying src/meme_4.6.0/tests/mast/mast.crp0.tcm -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,713 copying src/meme_4.6.0/tests/mast/mast.INO_up800.zoops -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,716 copying src/meme_4.6.0/tests/mast/mast.adh.tcm.mini-drosoph.s -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,718 copying src/meme_4.6.0/tests/mast/mast.farntrans5.zoops -> build/src/meme_4.6.0/tests/mast 2023-09-11T02:11:44,721 creating build/src/meme_4.6.0/tests/qvalue 2023-09-11T02:11:44,722 copying src/meme_4.6.0/tests/qvalue/observed.txt -> build/src/meme_4.6.0/tests/qvalue 2023-09-11T02:11:44,724 copying src/meme_4.6.0/tests/qvalue/Makefile.am -> build/src/meme_4.6.0/tests/qvalue 2023-09-11T02:11:44,726 copying src/meme_4.6.0/tests/qvalue/null.txt -> build/src/meme_4.6.0/tests/qvalue 2023-09-11T02:11:44,728 copying src/meme_4.6.0/tests/qvalue/Makefile.in -> build/src/meme_4.6.0/tests/qvalue 2023-09-11T02:11:44,730 copying src/meme_4.6.0/tests/qvalue/Makefile -> build/src/meme_4.6.0/tests/qvalue 2023-09-11T02:11:44,732 copying src/meme_4.6.0/tests/qvalue/uniform.out -> build/src/meme_4.6.0/tests/qvalue 2023-09-11T02:11:44,735 copying src/meme_4.6.0/tests/qvalue/uniform.txt -> build/src/meme_4.6.0/tests/qvalue 2023-09-11T02:11:44,738 copying src/meme_4.6.0/tests/qvalue/observed.out -> build/src/meme_4.6.0/tests/qvalue 2023-09-11T02:11:44,740 creating build/src/meme_4.6.0/tests/fimo 2023-09-11T02:11:44,741 copying src/meme_4.6.0/tests/fimo/fimo-priors.txt -> build/src/meme_4.6.0/tests/fimo 2023-09-11T02:11:44,744 copying src/meme_4.6.0/tests/fimo/GCN4_YPD.fasta -> build/src/meme_4.6.0/tests/fimo 2023-09-11T02:11:44,748 copying src/meme_4.6.0/tests/fimo/spiked.fasta -> build/src/meme_4.6.0/tests/fimo 2023-09-11T02:11:44,750 copying src/meme_4.6.0/tests/fimo/Makefile.am -> build/src/meme_4.6.0/tests/fimo 2023-09-11T02:11:44,753 copying src/meme_4.6.0/tests/fimo/Makefile.in -> build/src/meme_4.6.0/tests/fimo 2023-09-11T02:11:44,756 copying src/meme_4.6.0/tests/fimo/fimo.txt -> build/src/meme_4.6.0/tests/fimo 2023-09-11T02:11:44,758 copying src/meme_4.6.0/tests/fimo/Makefile -> build/src/meme_4.6.0/tests/fimo 2023-09-11T02:11:44,761 copying src/meme_4.6.0/tests/fimo/fimo-motif23.txt -> build/src/meme_4.6.0/tests/fimo 2023-09-11T02:11:44,764 copying src/meme_4.6.0/tests/fimo/GCN4_YPD.psp -> build/src/meme_4.6.0/tests/fimo 2023-09-11T02:11:44,776 copying src/meme_4.6.0/tests/fimo/MCM1.meme.html -> build/src/meme_4.6.0/tests/fimo 2023-09-11T02:11:44,779 copying src/meme_4.6.0/tests/fimo/prior.dist.txt -> build/src/meme_4.6.0/tests/fimo 2023-09-11T02:11:44,781 copying src/meme_4.6.0/tests/fimo/GCN4.meme -> build/src/meme_4.6.0/tests/fimo 2023-09-11T02:11:44,784 copying src/meme_4.6.0/tests/lex0.s -> build/src/meme_4.6.0/tests 2023-09-11T02:11:44,786 copying src/meme_4.6.0/tests/INO_up800.s -> build/src/meme_4.6.0/tests 2023-09-11T02:11:44,790 creating build/src/meme_4.6.0/tests/tomtom 2023-09-11T02:11:44,791 copying src/meme_4.6.0/tests/tomtom/tomtom.out.blic5 -> build/src/meme_4.6.0/tests/tomtom 2023-09-11T02:11:44,794 copying src/meme_4.6.0/tests/tomtom/Makefile.am -> build/src/meme_4.6.0/tests/tomtom 2023-09-11T02:11:44,796 copying src/meme_4.6.0/tests/tomtom/tomtom.out.allr -> build/src/meme_4.6.0/tests/tomtom 2023-09-11T02:11:44,798 copying src/meme_4.6.0/tests/tomtom/Makefile.in -> build/src/meme_4.6.0/tests/tomtom 2023-09-11T02:11:44,802 copying src/meme_4.6.0/tests/tomtom/tomtom.out.sandelin -> build/src/meme_4.6.0/tests/tomtom 2023-09-11T02:11:44,804 copying src/meme_4.6.0/tests/tomtom/Makefile -> build/src/meme_4.6.0/tests/tomtom 2023-09-11T02:11:44,807 copying src/meme_4.6.0/tests/tomtom/tomtom.out.blic1 -> build/src/meme_4.6.0/tests/tomtom 2023-09-11T02:11:44,810 copying src/meme_4.6.0/tests/tomtom/tomtom.out.pearson -> build/src/meme_4.6.0/tests/tomtom 2023-09-11T02:11:44,812 copying src/meme_4.6.0/tests/tomtom/tomtom.out.ed -> build/src/meme_4.6.0/tests/tomtom 2023-09-11T02:11:44,815 copying src/meme_4.6.0/tests/tomtom/tomtom.out.kullback -> build/src/meme_4.6.0/tests/tomtom 2023-09-11T02:11:44,817 copying src/meme_4.6.0/configure.lineno -> build/src/meme_4.6.0 2023-09-11T02:11:44,842 copying src/meme_4.6.0/stamp-h1 -> build/src/meme_4.6.0 2023-09-11T02:11:44,843 copying src/meme_4.6.0/config.h -> build/src/meme_4.6.0 2023-09-11T02:11:44,846 copying src/meme_4.6.0/Makefile -> build/src/meme_4.6.0 2023-09-11T02:11:44,849 creating build/src/meme_4.6.0/doc 2023-09-11T02:11:44,850 copying src/meme_4.6.0/doc/meme-format.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,852 copying src/meme_4.6.0/doc/mhmm.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,855 copying src/meme_4.6.0/doc/release-notes.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,859 copying src/meme_4.6.0/doc/remove-alignment-gaps.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,860 copying src/meme_4.6.0/doc/clustalw2phylip.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,863 copying src/meme_4.6.0/doc/fasta-get-markov.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,864 copying src/meme_4.6.0/doc/uniprobe2meme.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,867 copying src/meme_4.6.0/doc/fasta-io.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,869 copying src/meme_4.6.0/doc/overview.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,872 copying src/meme_4.6.0/doc/meme-install.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,875 copying src/meme_4.6.0/doc/reduce-alignment.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,878 copying src/meme_4.6.0/doc/purge.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,879 copying src/meme_4.6.0/doc/tamo2meme.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,882 copying src/meme_4.6.0/doc/lipo.linear.mhmm -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,885 copying src/meme_4.6.0/doc/lipo.fasta -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,887 copying src/meme_4.6.0/doc/fimo.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,889 copying src/meme_4.6.0/doc/gomo_highlight.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,891 copying src/meme_4.6.0/doc/cite.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,894 copying src/meme_4.6.0/doc/readseq.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,896 copying src/meme_4.6.0/doc/glam2scan_man.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,898 copying src/meme_4.6.0/doc/scpd2meme.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,900 copying src/meme_4.6.0/doc/glam2-template-header.js -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,902 copying src/meme_4.6.0/doc/select-star-species.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,905 copying src/meme_4.6.0/doc/meme-io.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,907 copying src/meme_4.6.0/doc/psp-gen.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,909 copying src/meme_4.6.0/doc/fasta-format.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,912 copying src/meme_4.6.0/doc/clustalw-format.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,914 copying src/meme_4.6.0/doc/glam2_man.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,916 copying src/meme_4.6.0/doc/lipo.meme.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,920 copying src/meme_4.6.0/doc/Makefile.am -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,922 copying src/meme_4.6.0/doc/fasta-io.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,925 copying src/meme_4.6.0/doc/mcast.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,927 copying src/meme_4.6.0/doc/mhmms.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,930 copying src/meme_4.6.0/doc/ceqlogo.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,932 copying src/meme_4.6.0/doc/chen2meme.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,934 copying src/meme_4.6.0/doc/modified-template-footer.js -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,936 copying src/meme_4.6.0/doc/mast2txt.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,938 copying src/meme_4.6.0/doc/alphtype.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,940 copying src/meme_4.6.0/doc/reduce-alignment.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,942 copying src/meme_4.6.0/doc/glam2_ref.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,945 copying src/meme_4.6.0/doc/miao.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,947 copying src/meme_4.6.0/doc/fasta-get-markov.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,949 copying src/meme_4.6.0/doc/meme-chip-tutorial.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,951 copying src/meme_4.6.0/doc/Makefile.in -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,954 copying src/meme_4.6.0/doc/glam2format_man.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,957 copying src/meme_4.6.0/doc/dreme.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,958 copying src/meme_4.6.0/doc/getsize.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,960 copying src/meme_4.6.0/doc/clustalw2phylip.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,962 copying src/meme_4.6.0/doc/modified-template-footer.in -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,965 copying src/meme_4.6.0/doc/alphabets.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,966 copying src/meme_4.6.0/doc/standards.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,968 copying src/meme_4.6.0/doc/miao.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,971 copying src/meme_4.6.0/doc/mcast.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,973 copying src/meme_4.6.0/doc/gomo-format.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,975 copying src/meme_4.6.0/doc/gendb.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,977 copying src/meme_4.6.0/doc/motiph.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,980 copying src/meme_4.6.0/doc/meme-chip-tutorial.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,982 copying src/meme_4.6.0/doc/options.xsl -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,985 copying src/meme_4.6.0/doc/mhmm-output.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,987 copying src/meme_4.6.0/doc/meta-meme.gif -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,989 copying src/meme_4.6.0/doc/psp-gen.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:44,992 creating build/src/meme_4.6.0/doc/images 2023-09-11T02:11:44,993 copying src/meme_4.6.0/doc/images/memechip_logo.png -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:44,996 copying src/meme_4.6.0/doc/images/UWlogo150p.gif -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:44,998 copying src/meme_4.6.0/doc/images/ncrr_logo.gif -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:45,000 copying src/meme_4.6.0/doc/images/Makefile.am -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:45,002 copying src/meme_4.6.0/doc/images/uq_logo.png -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:45,004 copying src/meme_4.6.0/doc/images/mcast-logo.png -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:45,007 copying src/meme_4.6.0/doc/images/Makefile.in -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:45,010 copying src/meme_4.6.0/doc/images/sdsc_logo.png -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:45,011 copying src/meme_4.6.0/doc/images/fimo_logo.png -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:45,014 copying src/meme_4.6.0/doc/images/cbrc_logo.png -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:45,016 copying src/meme_4.6.0/doc/images/glam2scan_logo.png -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:45,018 copying src/meme_4.6.0/doc/images/schematic.fig -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:45,021 copying src/meme_4.6.0/doc/images/Makefile -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:45,024 copying src/meme_4.6.0/doc/images/tomtom_logo.png -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:45,026 copying src/meme_4.6.0/doc/images/spamo_logo.png -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:45,029 copying src/meme_4.6.0/doc/images/glam2_logo.png -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:45,032 copying src/meme_4.6.0/doc/images/schematic.png -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:45,034 copying src/meme_4.6.0/doc/images/webserver_schema.png -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:45,037 copying src/meme_4.6.0/doc/images/nbcr_logo_trans.gif -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:45,039 copying src/meme_4.6.0/doc/images/ucsd_logo.png -> build/src/meme_4.6.0/doc/images 2023-09-11T02:11:45,041 copying src/meme_4.6.0/doc/mhmme.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,044 copying src/meme_4.6.0/doc/authors.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,046 copying src/meme_4.6.0/doc/glam2mask_man.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,049 copying src/meme_4.6.0/doc/ama.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,051 copying src/meme_4.6.0/doc/log-hmm.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,053 copying src/meme_4.6.0/doc/alphtype.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,054 copying src/meme_4.6.0/doc/priority2meme.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,057 copying src/meme_4.6.0/doc/gomo.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,059 copying src/meme_4.6.0/doc/godag-format.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,062 copying src/meme_4.6.0/doc/shadow.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,064 copying src/meme_4.6.0/doc/glam2_dirichlet.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,066 copying src/meme_4.6.0/doc/fimo.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,068 copying src/meme_4.6.0/doc/glam2_tut.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,070 copying src/meme_4.6.0/doc/fitevd.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,073 copying src/meme_4.6.0/doc/meme.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,076 copying src/meme_4.6.0/doc/bfile-format.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,078 copying src/meme_4.6.0/doc/dreme.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,080 copying src/meme_4.6.0/doc/iupac2meme.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,082 copying src/meme_4.6.0/doc/glam2_alphabet.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,085 copying src/meme_4.6.0/doc/mhmm.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,087 copying src/meme_4.6.0/doc/install.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,089 copying src/meme_4.6.0/doc/compute-prior-dist.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,091 copying src/meme_4.6.0/doc/tomtom.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,094 copying src/meme_4.6.0/doc/draw-mhmm.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,096 copying src/meme_4.6.0/doc/scripting.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,098 copying src/meme_4.6.0/doc/meme-io.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,100 copying src/meme_4.6.0/doc/Makefile -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,103 copying src/meme_4.6.0/doc/glam2.css -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,104 copying src/meme_4.6.0/doc/beadstring.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,107 copying src/meme_4.6.0/doc/mhmmscan.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,110 copying src/meme_4.6.0/doc/beadstring.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,112 copying src/meme_4.6.0/doc/iupac.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,114 copying src/meme_4.6.0/doc/lipo.meme.stripped.txt -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,116 copying src/meme_4.6.0/doc/sdsc.gif -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,119 copying src/meme_4.6.0/doc/mast.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,122 copying src/meme_4.6.0/doc/ama.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,124 creating build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,125 copying src/meme_4.6.0/doc/examples/sample-protein-motif.meme-io -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,128 creating build/src/meme_4.6.0/doc/examples/glam2scan_example_output_files 2023-09-11T02:11:45,129 copying src/meme_4.6.0/doc/examples/glam2scan_example_output_files/Makefile.am -> build/src/meme_4.6.0/doc/examples/glam2scan_example_output_files 2023-09-11T02:11:45,131 copying src/meme_4.6.0/doc/examples/glam2scan_example_output_files/Makefile.in -> build/src/meme_4.6.0/doc/examples/glam2scan_example_output_files 2023-09-11T02:11:45,133 copying src/meme_4.6.0/doc/examples/glam2scan_example_output_files/Makefile -> build/src/meme_4.6.0/doc/examples/glam2scan_example_output_files 2023-09-11T02:11:45,136 copying src/meme_4.6.0/doc/examples/glam2scan_example_output_files/glam2scan.html -> build/src/meme_4.6.0/doc/examples/glam2scan_example_output_files 2023-09-11T02:11:45,138 copying src/meme_4.6.0/doc/examples/sample-dna-motif.meme-io -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,140 creating build/src/meme_4.6.0/doc/examples/fimo_example_output_files 2023-09-11T02:11:45,141 copying src/meme_4.6.0/doc/examples/fimo_example_output_files/cisml.css -> build/src/meme_4.6.0/doc/examples/fimo_example_output_files 2023-09-11T02:11:45,143 copying src/meme_4.6.0/doc/examples/fimo_example_output_files/fimo.html -> build/src/meme_4.6.0/doc/examples/fimo_example_output_files 2023-09-11T02:11:45,145 copying src/meme_4.6.0/doc/examples/fimo_example_output_files/Makefile.am -> build/src/meme_4.6.0/doc/examples/fimo_example_output_files 2023-09-11T02:11:45,147 copying src/meme_4.6.0/doc/examples/fimo_example_output_files/Makefile.in -> build/src/meme_4.6.0/doc/examples/fimo_example_output_files 2023-09-11T02:11:45,149 copying src/meme_4.6.0/doc/examples/fimo_example_output_files/fimo.txt -> build/src/meme_4.6.0/doc/examples/fimo_example_output_files 2023-09-11T02:11:45,151 copying src/meme_4.6.0/doc/examples/fimo_example_output_files/fimo.xml -> build/src/meme_4.6.0/doc/examples/fimo_example_output_files 2023-09-11T02:11:45,154 copying src/meme_4.6.0/doc/examples/fimo_example_output_files/Makefile -> build/src/meme_4.6.0/doc/examples/fimo_example_output_files 2023-09-11T02:11:45,156 copying src/meme_4.6.0/doc/examples/fimo_example_output_files/fimo.gff -> build/src/meme_4.6.0/doc/examples/fimo_example_output_files 2023-09-11T02:11:45,158 copying src/meme_4.6.0/doc/examples/fimo_example_output_files/fimo-to-html.xsl -> build/src/meme_4.6.0/doc/examples/fimo_example_output_files 2023-09-11T02:11:45,160 creating build/src/meme_4.6.0/doc/examples/mast_example_output_files 2023-09-11T02:11:45,161 copying src/meme_4.6.0/doc/examples/mast_example_output_files/Makefile.am -> build/src/meme_4.6.0/doc/examples/mast_example_output_files 2023-09-11T02:11:45,163 copying src/meme_4.6.0/doc/examples/mast_example_output_files/Makefile.in -> build/src/meme_4.6.0/doc/examples/mast_example_output_files 2023-09-11T02:11:45,166 copying src/meme_4.6.0/doc/examples/mast_example_output_files/mast.txt -> build/src/meme_4.6.0/doc/examples/mast_example_output_files 2023-09-11T02:11:45,168 copying src/meme_4.6.0/doc/examples/mast_example_output_files/mast.xml -> build/src/meme_4.6.0/doc/examples/mast_example_output_files 2023-09-11T02:11:45,171 copying src/meme_4.6.0/doc/examples/mast_example_output_files/Makefile -> build/src/meme_4.6.0/doc/examples/mast_example_output_files 2023-09-11T02:11:45,173 copying src/meme_4.6.0/doc/examples/mast_example_output_files/mast.html -> build/src/meme_4.6.0/doc/examples/mast_example_output_files 2023-09-11T02:11:45,178 copying src/meme_4.6.0/doc/examples/Makefile.am -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,180 copying src/meme_4.6.0/doc/examples/sample-glam2-aln.protein -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,182 copying src/meme_4.6.0/doc/examples/sample-dna-Klf1-200-100-ame.html -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,184 copying src/meme_4.6.0/doc/examples/Makefile.in -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,186 creating build/src/meme_4.6.0/doc/examples/sample_opal_scripts 2023-09-11T02:11:45,188 copying src/meme_4.6.0/doc/examples/sample_opal_scripts/FimoClient.pl -> build/src/meme_4.6.0/doc/examples/sample_opal_scripts 2023-09-11T02:11:45,190 copying src/meme_4.6.0/doc/examples/sample_opal_scripts/MemeClient.pl -> build/src/meme_4.6.0/doc/examples/sample_opal_scripts 2023-09-11T02:11:45,192 copying src/meme_4.6.0/doc/examples/sample_opal_scripts/Makefile.am -> build/src/meme_4.6.0/doc/examples/sample_opal_scripts 2023-09-11T02:11:45,194 copying src/meme_4.6.0/doc/examples/sample_opal_scripts/crp0.meme.xml -> build/src/meme_4.6.0/doc/examples/sample_opal_scripts 2023-09-11T02:11:45,197 copying src/meme_4.6.0/doc/examples/sample_opal_scripts/Makefile.in -> build/src/meme_4.6.0/doc/examples/sample_opal_scripts 2023-09-11T02:11:45,200 copying src/meme_4.6.0/doc/examples/sample_opal_scripts/MemeClient.py -> build/src/meme_4.6.0/doc/examples/sample_opal_scripts 2023-09-11T02:11:45,203 copying src/meme_4.6.0/doc/examples/sample_opal_scripts/crp0.fasta -> build/src/meme_4.6.0/doc/examples/sample_opal_scripts 2023-09-11T02:11:45,204 copying src/meme_4.6.0/doc/examples/sample_opal_scripts/Makefile -> build/src/meme_4.6.0/doc/examples/sample_opal_scripts 2023-09-11T02:11:45,207 copying src/meme_4.6.0/doc/examples/sample_opal_scripts/FimoClient.py -> build/src/meme_4.6.0/doc/examples/sample_opal_scripts 2023-09-11T02:11:45,209 copying src/meme_4.6.0/doc/examples/sample-dna-Klf1-200.fa -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,213 copying src/meme_4.6.0/doc/examples/memechip_example_output_files.tgz -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,368 copying src/meme_4.6.0/doc/examples/sample-kabat.seq -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,371 copying src/meme_4.6.0/doc/examples/sample-dna-Klf1-200-100-shuffled.fa -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,373 copying src/meme_4.6.0/doc/examples/Jaspar-subset.meme -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,376 copying src/meme_4.6.0/doc/examples/sample-glam2-aln.dna -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,378 copying src/meme_4.6.0/doc/examples/At.fa -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,380 copying src/meme_4.6.0/doc/examples/Makefile -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,383 copying src/meme_4.6.0/doc/examples/sample-protein-motif.mast-io -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,386 creating build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,387 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/logo6.png -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,389 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/logo_ssc5.png -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,392 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/logo7.png -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,394 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/Makefile.am -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,396 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/logo8.png -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,399 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/logo_ssc4.png -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,401 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/Makefile.in -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,404 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/logo2.png -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,407 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/logo_ssc1.png -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,409 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/logo9.png -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,411 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/logo_ssc8.png -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,414 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/logo5.png -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,417 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/glam2.html -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,419 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/logo4.png -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,422 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/Makefile -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,424 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/logo_ssc3.png -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,427 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/logo_ssc9.png -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,429 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/logo_ssc6.png -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,431 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/logo_ssc7.png -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,434 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/logo3.png -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,436 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/logo1.png -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,438 copying src/meme_4.6.0/doc/examples/glam2_example_output_files/logo_ssc2.png -> build/src/meme_4.6.0/doc/examples/glam2_example_output_files 2023-09-11T02:11:45,441 creating build/src/meme_4.6.0/doc/examples/meme_example_output_files 2023-09-11T02:11:45,442 copying src/meme_4.6.0/doc/examples/meme_example_output_files/logo_rc1.png -> build/src/meme_4.6.0/doc/examples/meme_example_output_files 2023-09-11T02:11:45,445 copying src/meme_4.6.0/doc/examples/meme_example_output_files/logo_rc3.eps -> build/src/meme_4.6.0/doc/examples/meme_example_output_files 2023-09-11T02:11:45,447 copying src/meme_4.6.0/doc/examples/meme_example_output_files/logo_rc2.eps -> build/src/meme_4.6.0/doc/examples/meme_example_output_files 2023-09-11T02:11:45,449 copying src/meme_4.6.0/doc/examples/meme_example_output_files/logo_rc3.png -> build/src/meme_4.6.0/doc/examples/meme_example_output_files 2023-09-11T02:11:45,452 copying src/meme_4.6.0/doc/examples/meme_example_output_files/Makefile.am -> build/src/meme_4.6.0/doc/examples/meme_example_output_files 2023-09-11T02:11:45,454 copying src/meme_4.6.0/doc/examples/meme_example_output_files/meme.xml -> build/src/meme_4.6.0/doc/examples/meme_example_output_files 2023-09-11T02:11:45,457 copying src/meme_4.6.0/doc/examples/meme_example_output_files/Makefile.in -> build/src/meme_4.6.0/doc/examples/meme_example_output_files 2023-09-11T02:11:45,459 copying src/meme_4.6.0/doc/examples/meme_example_output_files/logo3.eps -> build/src/meme_4.6.0/doc/examples/meme_example_output_files 2023-09-11T02:11:45,462 copying src/meme_4.6.0/doc/examples/meme_example_output_files/logo2.png -> build/src/meme_4.6.0/doc/examples/meme_example_output_files 2023-09-11T02:11:45,464 copying src/meme_4.6.0/doc/examples/meme_example_output_files/logo_rc2.png -> build/src/meme_4.6.0/doc/examples/meme_example_output_files 2023-09-11T02:11:45,466 copying src/meme_4.6.0/doc/examples/meme_example_output_files/meme.html -> build/src/meme_4.6.0/doc/examples/meme_example_output_files 2023-09-11T02:11:45,471 copying src/meme_4.6.0/doc/examples/meme_example_output_files/Makefile -> build/src/meme_4.6.0/doc/examples/meme_example_output_files 2023-09-11T02:11:45,473 copying src/meme_4.6.0/doc/examples/meme_example_output_files/meme.txt -> build/src/meme_4.6.0/doc/examples/meme_example_output_files 2023-09-11T02:11:45,476 copying src/meme_4.6.0/doc/examples/meme_example_output_files/logo_rc1.eps -> build/src/meme_4.6.0/doc/examples/meme_example_output_files 2023-09-11T02:11:45,478 copying src/meme_4.6.0/doc/examples/meme_example_output_files/logo1.eps -> build/src/meme_4.6.0/doc/examples/meme_example_output_files 2023-09-11T02:11:45,481 copying src/meme_4.6.0/doc/examples/meme_example_output_files/logo2.eps -> build/src/meme_4.6.0/doc/examples/meme_example_output_files 2023-09-11T02:11:45,483 copying src/meme_4.6.0/doc/examples/meme_example_output_files/logo3.png -> build/src/meme_4.6.0/doc/examples/meme_example_output_files 2023-09-11T02:11:45,485 copying src/meme_4.6.0/doc/examples/meme_example_output_files/logo1.png -> build/src/meme_4.6.0/doc/examples/meme_example_output_files 2023-09-11T02:11:45,488 creating build/src/meme_4.6.0/doc/examples/compute_prior_dist_example_output_files 2023-09-11T02:11:45,489 copying src/meme_4.6.0/doc/examples/compute_prior_dist_example_output_files/Makefile.am -> build/src/meme_4.6.0/doc/examples/compute_prior_dist_example_output_files 2023-09-11T02:11:45,491 copying src/meme_4.6.0/doc/examples/compute_prior_dist_example_output_files/Makefile.in -> build/src/meme_4.6.0/doc/examples/compute_prior_dist_example_output_files 2023-09-11T02:11:45,493 copying src/meme_4.6.0/doc/examples/compute_prior_dist_example_output_files/Makefile -> build/src/meme_4.6.0/doc/examples/compute_prior_dist_example_output_files 2023-09-11T02:11:45,495 copying src/meme_4.6.0/doc/examples/compute_prior_dist_example_output_files/prior.dist.txt -> build/src/meme_4.6.0/doc/examples/compute_prior_dist_example_output_files 2023-09-11T02:11:45,498 copying src/meme_4.6.0/doc/examples/sample-dna-Klf1.fa -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,524 copying src/meme_4.6.0/doc/examples/sample-dna-motif.mast-io -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,526 creating build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,527 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+MA0072.1.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,530 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+M00528.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,532 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+M01202.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,535 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+MA0159.1.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,537 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/Makefile.am -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,539 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_-M00763.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,542 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+MA0065.2.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,544 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+M00156.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,547 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_-M00226.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,550 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/Makefile.in -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,553 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_-M01217.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,556 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+M01033.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,559 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+M01032.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,563 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/tomtom.xml -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,568 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_-MA0112.1.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,573 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/tomtom.html -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,579 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+MA0066.1.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,583 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+MA0258.1.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,586 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_-M00191.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,590 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/Makefile -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,593 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+MA0074.1.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,596 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+M01270.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,599 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_-MA0112.2.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,602 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+M01248.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,605 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+M00157.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,608 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/tomtom.txt -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,611 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_-M01227.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,614 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+M01198.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,617 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_-M01282.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,620 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+M00959.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,623 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+MA0071.1.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,626 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+MA0451.1.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,629 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+M00511.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,633 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+MA0160.1.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,636 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+M01268.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,639 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+M00515.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,643 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_-M00172.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,646 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+M01138.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,649 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/STRGGTCAN.meme -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,650 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+M00202.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,654 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+M00762.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,656 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_+M00242.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,659 copying src/meme_4.6.0/doc/examples/tomtom_example_output_files/logo_STRGGTCAN_-M00965.png -> build/src/meme_4.6.0/doc/examples/tomtom_example_output_files 2023-09-11T02:11:45,661 creating build/src/meme_4.6.0/doc/examples/mcast_example_output_files 2023-09-11T02:11:45,662 copying src/meme_4.6.0/doc/examples/mcast_example_output_files/Makefile.am -> build/src/meme_4.6.0/doc/examples/mcast_example_output_files 2023-09-11T02:11:45,665 copying src/meme_4.6.0/doc/examples/mcast_example_output_files/Makefile.in -> build/src/meme_4.6.0/doc/examples/mcast_example_output_files 2023-09-11T02:11:45,667 copying src/meme_4.6.0/doc/examples/mcast_example_output_files/mcast.html -> build/src/meme_4.6.0/doc/examples/mcast_example_output_files 2023-09-11T02:11:45,671 copying src/meme_4.6.0/doc/examples/mcast_example_output_files/Makefile -> build/src/meme_4.6.0/doc/examples/mcast_example_output_files 2023-09-11T02:11:45,673 copying src/meme_4.6.0/doc/examples/sample-dna-Klf1-200-100-dreme.txt -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,675 copying src/meme_4.6.0/doc/examples/sample-dna-Klf1-200-100.fa -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,678 copying src/meme_4.6.0/doc/examples/sample-dna-Klf1-200-100-ame.txt -> build/src/meme_4.6.0/doc/examples 2023-09-11T02:11:45,680 copying src/meme_4.6.0/doc/meme.dtd -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,682 copying src/meme_4.6.0/doc/ame.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,684 copying src/meme_4.6.0/doc/metameme.css -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,686 copying src/meme_4.6.0/doc/draw-mhmm.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,688 copying src/meme_4.6.0/doc/ceqlogo.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,690 copying src/meme_4.6.0/doc/transfac-format.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,692 copying src/meme_4.6.0/doc/jaspar2meme.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,694 copying src/meme_4.6.0/doc/qvalue.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,696 copying src/meme_4.6.0/doc/readseq.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,698 copying src/meme_4.6.0/doc/qvalue.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,700 copying src/meme_4.6.0/doc/mhmms.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,703 copying src/meme_4.6.0/doc/README -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,705 copying src/meme_4.6.0/doc/meme-suite.css -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,707 copying src/meme_4.6.0/doc/reconcile-tree-alignment.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,709 copying src/meme_4.6.0/doc/pmp_bf.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,711 copying src/meme_4.6.0/doc/lipo.linear.all.mhmms -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,713 copying src/meme_4.6.0/doc/transfac2meme.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,715 copying src/meme_4.6.0/doc/fitevd.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,717 copying src/meme_4.6.0/doc/remove-alignment-gaps.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,719 copying src/meme_4.6.0/doc/GLAM2_method.pdf -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,724 copying src/meme_4.6.0/doc/motiph.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,727 copying src/meme_4.6.0/doc/ame.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,729 copying src/meme_4.6.0/doc/shadow.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,731 copying src/meme_4.6.0/doc/glam2_install.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,733 copying src/meme_4.6.0/doc/clustalw2fasta.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,735 copying src/meme_4.6.0/doc/getsize.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,737 copying src/meme_4.6.0/doc/reconcile-tree-alignment.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,739 copying src/meme_4.6.0/doc/log-hmm.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,741 copying src/meme_4.6.0/doc/compute-prior-dist.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,743 copying src/meme_4.6.0/doc/copyright.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,745 copying src/meme_4.6.0/doc/gendb.xml -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,746 copying src/meme_4.6.0/doc/pmp_bf.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,748 copying src/meme_4.6.0/doc/mhmme.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,750 copying src/meme_4.6.0/doc/meme-suite-logo.js -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,752 copying src/meme_4.6.0/doc/gomo.html -> build/src/meme_4.6.0/doc 2023-09-11T02:11:45,754 creating build/src/meme_4.6.0/config 2023-09-11T02:11:45,755 copying src/meme_4.6.0/config/depcomp -> build/src/meme_4.6.0/config 2023-09-11T02:11:45,759 copying src/meme_4.6.0/config/missing -> build/src/meme_4.6.0/config 2023-09-11T02:11:45,766 copying src/meme_4.6.0/config/config.sub -> build/src/meme_4.6.0/config 2023-09-11T02:11:45,769 copying src/meme_4.6.0/config/mkinstalldirs -> build/src/meme_4.6.0/config 2023-09-11T02:11:45,771 copying src/meme_4.6.0/config/ltmain.sh -> build/src/meme_4.6.0/config 2023-09-11T02:11:45,777 copying src/meme_4.6.0/config/config.guess -> build/src/meme_4.6.0/config 2023-09-11T02:11:45,780 copying src/meme_4.6.0/config/install-sh -> build/src/meme_4.6.0/config 2023-09-11T02:11:45,782 copying src/meme_4.6.0/config/compile -> build/src/meme_4.6.0/config 2023-09-11T02:11:45,784 copying src/meme_4.6.0/configure.ac -> build/src/meme_4.6.0 2023-09-11T02:11:45,787 creating build/src/meme_4.6.0/autom4te.cache 2023-09-11T02:11:45,788 copying src/meme_4.6.0/autom4te.cache/traces.0 -> build/src/meme_4.6.0/autom4te.cache 2023-09-11T02:11:45,792 copying src/meme_4.6.0/autom4te.cache/output.0 -> build/src/meme_4.6.0/autom4te.cache 2023-09-11T02:11:45,811 copying src/meme_4.6.0/autom4te.cache/requests -> build/src/meme_4.6.0/autom4te.cache 2023-09-11T02:11:45,813 copying src/meme_4.6.0/ChangeLog -> build/src/meme_4.6.0 2023-09-11T02:11:45,815 creating build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,816 copying src/meme_4.6.0/scripts/fasta-fetch.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,819 copying src/meme_4.6.0/scripts/fasta-center.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,821 copying src/meme_4.6.0/scripts/fasta-hamming-enrich -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,823 copying src/meme_4.6.0/scripts/rna2meme -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,825 copying src/meme_4.6.0/scripts/meme2meme -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,828 copying src/meme_4.6.0/scripts/priority2meme.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,830 copying src/meme_4.6.0/scripts/hypergeometric-dynamicprog.pl -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,832 copying src/meme_4.6.0/scripts/get_db_csv.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,834 copying src/meme_4.6.0/scripts/mailer.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,837 copying src/meme_4.6.0/scripts/runtests -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,839 copying src/meme_4.6.0/scripts/CatList.pm -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,842 copying src/meme_4.6.0/scripts/MotifUtils.pm -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,844 copying src/meme_4.6.0/scripts/chen2meme.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,846 copying src/meme_4.6.0/scripts/fasta-fetch -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,848 copying src/meme_4.6.0/scripts/meme2meme.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,851 copying src/meme_4.6.0/scripts/update_meme_tests -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,853 copying src/meme_4.6.0/scripts/dreme -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,856 copying src/meme_4.6.0/scripts/Makefile.am -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,859 copying src/meme_4.6.0/scripts/fasta-make-index.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,861 copying src/meme_4.6.0/scripts/scpd2meme -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,863 copying src/meme_4.6.0/scripts/glam2html -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,865 copying src/meme_4.6.0/scripts/fasta-unique-names -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,867 copying src/meme_4.6.0/scripts/taipale2meme.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,869 copying src/meme_4.6.0/scripts/nmica2meme -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,871 copying src/meme_4.6.0/scripts/dreme.py.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,874 copying src/meme_4.6.0/scripts/spamo_webservice.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,877 copying src/meme_4.6.0/scripts/get_db_csv -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,879 copying src/meme_4.6.0/scripts/compare_dates -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,881 copying src/meme_4.6.0/scripts/Makefile.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,884 copying src/meme_4.6.0/scripts/hartemink2psp.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,887 copying src/meme_4.6.0/scripts/iupac2meme -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,889 copying src/meme_4.6.0/scripts/ama-qvalues.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,891 copying src/meme_4.6.0/scripts/texit -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,894 copying src/meme_4.6.0/scripts/meme -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,896 copying src/meme_4.6.0/scripts/lrun.csh.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,899 copying src/meme_4.6.0/scripts/rna2meme.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,908 copying src/meme_4.6.0/scripts/tomtom_webservice.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,910 copying src/meme_4.6.0/scripts/sd -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,913 copying src/meme_4.6.0/scripts/transfac2meme.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,915 copying src/meme_4.6.0/scripts/runcheck_p.sh.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,917 copying src/meme_4.6.0/scripts/uniprobe2meme.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,919 copying src/meme_4.6.0/scripts/transfac2meme -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,922 copying src/meme_4.6.0/scripts/fasta-hamming-enrich.py.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,924 copying src/meme_4.6.0/scripts/fasta-center -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,927 copying src/meme_4.6.0/scripts/fasta-dinucleotide-shuffle.py.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,929 copying src/meme_4.6.0/scripts/meme-get-motif -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,931 copying src/meme_4.6.0/scripts/uniprobe2meme -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,934 copying src/meme_4.6.0/scripts/fasta-get-markov.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,936 copying src/meme_4.6.0/scripts/fasta-hamming-enrich.py -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,939 copying src/meme_4.6.0/scripts/glam2scan2html.py.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,941 copying src/meme_4.6.0/scripts/fasta-shuffle-letters.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,943 copying src/meme_4.6.0/scripts/MemeWebUtils.pm.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,946 copying src/meme_4.6.0/scripts/meme-get-motif.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,948 copying src/meme_4.6.0/scripts/convert2html.pl -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,951 copying src/meme_4.6.0/scripts/fasta-subsample.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,953 copying src/meme_4.6.0/scripts/plotgen -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,955 copying src/meme_4.6.0/scripts/download -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,957 copying src/meme_4.6.0/scripts/hartemink2psp -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,960 copying src/meme_4.6.0/scripts/compare_dates.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,961 copying src/meme_4.6.0/scripts/mcast.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,964 copying src/meme_4.6.0/scripts/glam2scan2html -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,966 copying src/meme_4.6.0/scripts/Makefile -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,968 copying src/meme_4.6.0/scripts/tamo2meme -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,970 copying src/meme_4.6.0/scripts/plot-usage -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,972 copying src/meme_4.6.0/scripts/tamo2meme.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,974 copying src/meme_4.6.0/scripts/update-plot-usage.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,976 copying src/meme_4.6.0/scripts/scpd2meme.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,979 copying src/meme_4.6.0/scripts/update_db.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,981 copying src/meme_4.6.0/scripts/comb-dynamicprog.pl -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,983 copying src/meme_4.6.0/scripts/fasta-make-index -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,985 copying src/meme_4.6.0/scripts/fasta-dinucleotide-shuffle.py -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,987 copying src/meme_4.6.0/scripts/MemeWebUtils.pm -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,990 copying src/meme_4.6.0/scripts/jaspar2meme.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,992 copying src/meme_4.6.0/scripts/fasta-unique-names.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,995 copying src/meme_4.6.0/scripts/nmica2meme.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,997 copying src/meme_4.6.0/scripts/jaspar2meme -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:45,999 copying src/meme_4.6.0/scripts/cat_max -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,002 copying src/meme_4.6.0/scripts/taipale2meme -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,004 copying src/meme_4.6.0/scripts/usage-reports -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,006 copying src/meme_4.6.0/scripts/glam2psfm.py.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,008 copying src/meme_4.6.0/scripts/iupac2meme.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,011 copying src/meme_4.6.0/scripts/prior_utils.pl -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,014 copying src/meme_4.6.0/scripts/mhmm2html -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,017 copying src/meme_4.6.0/scripts/ama-qvalues -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,019 copying src/meme_4.6.0/scripts/mhmm2html.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,022 copying src/meme_4.6.0/scripts/convert2html.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,025 copying src/meme_4.6.0/scripts/priority2meme -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,027 copying src/meme_4.6.0/scripts/metatest.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,030 copying src/meme_4.6.0/scripts/chen2meme -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,032 copying src/meme_4.6.0/scripts/glam2psfm -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,034 copying src/meme_4.6.0/scripts/fasta-dinucleotide-shuffle -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,036 copying src/meme_4.6.0/scripts/psp-gen.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,038 copying src/meme_4.6.0/scripts/sequence.py -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,041 copying src/meme_4.6.0/scripts/psp-gen -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,043 copying src/meme_4.6.0/scripts/hart2meme-bkg.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,045 copying src/meme_4.6.0/scripts/README -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,047 copying src/meme_4.6.0/scripts/runcheck -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,050 copying src/meme_4.6.0/scripts/glam2html.py.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,052 copying src/meme_4.6.0/scripts/obo2dag.jar -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,054 copying src/meme_4.6.0/scripts/fasta-get-markov -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,057 copying src/meme_4.6.0/scripts/update_db -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,059 copying src/meme_4.6.0/scripts/fasta-shuffle-letters -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,062 copying src/meme_4.6.0/scripts/fasta-subsample -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,064 copying src/meme_4.6.0/scripts/read_fasta_file.pl -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,066 copying src/meme_4.6.0/scripts/cat_max.pl.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,068 copying src/meme_4.6.0/scripts/meme.csh.in -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,070 copying src/meme_4.6.0/scripts/hart2meme-bkg -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,072 copying src/meme_4.6.0/scripts/hypergeometric.py -> build/src/meme_4.6.0/scripts 2023-09-11T02:11:46,074 copying src/meme_4.6.0/INSTALL -> build/src/meme_4.6.0 2023-09-11T02:11:46,076 copying src/meme_4.6.0/README -> build/src/meme_4.6.0 2023-09-11T02:11:46,078 copying src/meme_4.6.0/COPYING -> build/src/meme_4.6.0 2023-09-11T02:11:46,080 copying src/meme_4.6.0/config.h.in~ -> build/src/meme_4.6.0 2023-09-11T02:11:46,082 creating build/src/meme_4.6.0/website 2023-09-11T02:11:46,083 creating build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,084 copying src/meme_4.6.0/website/html/mhmm-options.in -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,087 copying src/meme_4.6.0/website/html/motif_input.js -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,090 copying src/meme_4.6.0/website/html/mast-faq.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,092 copying src/meme_4.6.0/website/html/metameme-help-format.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,094 copying src/meme_4.6.0/website/html/cisml.css -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,095 copying src/meme_4.6.0/website/html/glam2scan-intro.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,098 copying src/meme_4.6.0/website/html/template-footer.in -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,100 copying src/meme_4.6.0/website/html/canvas-test.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,102 copying src/meme_4.6.0/website/html/meme-download.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,104 copying src/meme_4.6.0/website/html/help_email.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,107 copying src/meme_4.6.0/website/html/mhmm-papers.in -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,108 copying src/meme_4.6.0/website/html/template-css.js -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,110 copying src/meme_4.6.0/website/html/submit-verify.in -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,113 copying src/meme_4.6.0/website/html/Makefile.am -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,115 copying src/meme_4.6.0/website/html/mhmm-links.in -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,117 copying src/meme_4.6.0/website/html/mast-output.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,120 copying src/meme_4.6.0/website/html/spamo.js -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,121 copying src/meme_4.6.0/website/html/metameme-intro.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,123 copying src/meme_4.6.0/website/html/intro.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,125 copying src/meme_4.6.0/website/html/motif_search.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,127 copying src/meme_4.6.0/website/html/Makefile.in -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,129 copying src/meme_4.6.0/website/html/papers.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,131 copying src/meme_4.6.0/website/html/cisml.pattern.html.xsl.in -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,133 copying src/meme_4.6.0/website/html/cisml.pattern.html.xsl -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,135 copying src/meme_4.6.0/website/html/gomo-intro.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,137 copying src/meme_4.6.0/website/html/mhmm-faq.in -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,140 copying src/meme_4.6.0/website/html/sample.database -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,142 copying src/meme_4.6.0/website/html/template-header.js -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,144 copying src/meme_4.6.0/website/html/memechip-intro.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,146 copying src/meme_4.6.0/website/html/selectdb.js -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,148 copying src/meme_4.6.0/website/html/showhide.js -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,150 copying src/meme_4.6.0/website/html/help_alphabet.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,152 copying src/meme_4.6.0/website/html/help_multiple_genomes.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,154 copying src/meme_4.6.0/website/html/glam2-intro.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,156 copying src/meme_4.6.0/website/html/tomtom.js -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,159 copying src/meme_4.6.0/website/html/meme-input.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,162 copying src/meme_4.6.0/website/html/fimo-intro.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,164 copying src/meme_4.6.0/website/html/search.js -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,166 copying src/meme_4.6.0/website/html/motif_input.css -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,168 copying src/meme_4.6.0/website/html/Makefile -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,171 copying src/meme_4.6.0/website/html/mhmm-download.in -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,173 copying src/meme_4.6.0/website/html/general-faq.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,176 copying src/meme_4.6.0/website/html/metameme-help-format.in -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,177 copying src/meme_4.6.0/website/html/help_psp.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,180 copying src/meme_4.6.0/website/html/mast-intro.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,182 copying src/meme_4.6.0/website/html/mast-input.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,184 copying src/meme_4.6.0/website/html/tomtom-intro.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,186 copying src/meme_4.6.0/website/html/metameme.css -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,188 copying src/meme_4.6.0/website/html/help_format.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,191 copying src/meme_4.6.0/website/html/help_filters.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,193 copying src/meme_4.6.0/website/html/motif_discovery.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,196 copying src/meme_4.6.0/website/html/meme-intro.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,198 copying src/meme_4.6.0/website/html/resources.in -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,200 copying src/meme_4.6.0/website/html/mcast-intro.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,202 copying src/meme_4.6.0/website/html/downloads.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,204 copying src/meme_4.6.0/website/html/tail-copyright -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,206 copying src/meme_4.6.0/website/html/metameme-intro.in -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,208 copying src/meme_4.6.0/website/html/head-copyright -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,210 copying src/meme_4.6.0/website/html/help_distribution.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,212 copying src/meme_4.6.0/website/html/meme-suite-menu.in -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,214 copying src/meme_4.6.0/website/html/validate.js -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,216 copying src/meme_4.6.0/website/html/help_width.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,218 copying src/meme_4.6.0/website/html/search.in -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,220 copying src/meme_4.6.0/website/html/help_sequences.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,222 copying src/meme_4.6.0/website/html/documentation.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,224 copying src/meme_4.6.0/website/html/check-submission-form.js -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,226 copying src/meme_4.6.0/website/html/mhmm-overview.in -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,229 copying src/meme_4.6.0/website/html/alternates.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,230 copying src/meme_4.6.0/website/html/meme-faq.html -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,232 copying src/meme_4.6.0/website/html/sample.query -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,234 copying src/meme_4.6.0/website/html/site.css -> build/src/meme_4.6.0/website/html 2023-09-11T02:11:46,236 copying src/meme_4.6.0/website/Makefile.am -> build/src/meme_4.6.0/website 2023-09-11T02:11:46,238 copying src/meme_4.6.0/website/Makefile.in -> build/src/meme_4.6.0/website 2023-09-11T02:11:46,241 creating build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,242 copying src/meme_4.6.0/website/images/help.png -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,244 copying src/meme_4.6.0/website/images/gomo.png -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,246 copying src/meme_4.6.0/website/images/memesuite.fig -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,248 copying src/meme_4.6.0/website/images/Makefile.am -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,250 copying src/meme_4.6.0/website/images/euclidean-eq.png -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,252 copying src/meme_4.6.0/website/images/mcast-logo.png -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,254 copying src/meme_4.6.0/website/images/page.gif -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,256 copying src/meme_4.6.0/website/images/consensus-eq-2.png -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,258 copying src/meme_4.6.0/website/images/join.gif -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,260 copying src/meme_4.6.0/website/images/Makefile.in -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,262 copying src/meme_4.6.0/website/images/bkg.jpg -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,264 copying src/meme_4.6.0/website/images/mcast-logo.fig -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,266 copying src/meme_4.6.0/website/images/plus.gif -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,268 copying src/meme_4.6.0/website/images/pasteur_logo.png -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,270 copying src/meme_4.6.0/website/images/meta-meme.gif -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,272 copying src/meme_4.6.0/website/images/memesuite.png -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,273 copying src/meme_4.6.0/website/images/memesuite_icon.png -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,276 copying src/meme_4.6.0/website/images/plus.png -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,278 copying src/meme_4.6.0/website/images/sandelin-eq.png -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,279 copying src/meme_4.6.0/website/images/meme.png -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,282 copying src/meme_4.6.0/website/images/host_logo.png -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,284 copying src/meme_4.6.0/website/images/line.gif -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,286 copying src/meme_4.6.0/website/images/acb_logo.png -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,288 copying src/meme_4.6.0/website/images/minus.png -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,290 copying src/meme_4.6.0/website/images/joinbottom.gif -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,292 copying src/meme_4.6.0/website/images/Makefile -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,294 copying src/meme_4.6.0/website/images/folder.gif -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,296 copying src/meme_4.6.0/website/images/minus.gif -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,298 copying src/meme_4.6.0/website/images/minusbottom.gif -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,300 copying src/meme_4.6.0/website/images/blankpixel.gif -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,301 copying src/meme_4.6.0/website/images/memesuite.eps -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,304 copying src/meme_4.6.0/website/images/plusbottom.gif -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,306 copying src/meme_4.6.0/website/images/sdsc.gif -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,308 copying src/meme_4.6.0/website/images/consensus-eq-1.png -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,310 copying src/meme_4.6.0/website/images/base.gif -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,312 copying src/meme_4.6.0/website/images/memesuite_icon.ico -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,315 copying src/meme_4.6.0/website/images/pearson-eq.png -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,317 copying src/meme_4.6.0/website/images/logo_alignment.png -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,320 copying src/meme_4.6.0/website/images/folderopen.gif -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,322 copying src/meme_4.6.0/website/images/mast.png -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,325 copying src/meme_4.6.0/website/images/flowchart.gif -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,327 copying src/meme_4.6.0/website/images/empty.gif -> build/src/meme_4.6.0/website/images 2023-09-11T02:11:46,329 copying src/meme_4.6.0/website/Makefile -> build/src/meme_4.6.0/website 2023-09-11T02:11:46,332 creating build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,332 copying src/meme_4.6.0/website/scripts/metameme -> build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,335 copying src/meme_4.6.0/website/scripts/oldmeme2meme.txt -> build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,337 copying src/meme_4.6.0/website/scripts/Log.txt -> build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,339 copying src/meme_4.6.0/website/scripts/Makefile.am -> build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,341 copying src/meme_4.6.0/website/scripts/Makefile.in -> build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,344 copying src/meme_4.6.0/website/scripts/MetaGlobals.txt -> build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,346 copying src/meme_4.6.0/website/scripts/Process.pm -> build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,348 copying src/meme_4.6.0/website/scripts/Globals.pm -> build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,350 copying src/meme_4.6.0/website/scripts/Globals.txt -> build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,352 copying src/meme_4.6.0/website/scripts/Makefile -> build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,355 copying src/meme_4.6.0/website/scripts/UID.txt -> build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,357 copying src/meme_4.6.0/website/scripts/Queue.pm -> build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,358 copying src/meme_4.6.0/website/scripts/changetoweb -> build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,360 copying src/meme_4.6.0/website/scripts/mhmm_globals.txt -> build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,362 copying src/meme_4.6.0/website/scripts/changetoweb.txt -> build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,365 copying src/meme_4.6.0/website/scripts/oldmeme2meme -> build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,367 copying src/meme_4.6.0/website/scripts/Submit.txt -> build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,369 copying src/meme_4.6.0/website/scripts/CGIutil.pm -> build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,371 copying src/meme_4.6.0/website/scripts/metameme.txt -> build/src/meme_4.6.0/website/scripts 2023-09-11T02:11:46,374 creating build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,375 copying src/meme_4.6.0/website/cgi-bin/tomtom_request.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,378 copying src/meme_4.6.0/website/cgi-bin/OpalServices.pm.in -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,380 copying src/meme_4.6.0/website/cgi-bin/mast.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,383 copying src/meme_4.6.0/website/cgi-bin/metameme.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,385 copying src/meme_4.6.0/website/cgi-bin/spamo_verify.tmpl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,387 copying src/meme_4.6.0/website/cgi-bin/nph-endpointtest.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,390 copying src/meme_4.6.0/website/cgi-bin/submit-verify.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,393 copying src/meme_4.6.0/website/cgi-bin/Makefile.am -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,395 copying src/meme_4.6.0/website/cgi-bin/motif_input.tmpl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,398 copying src/meme_4.6.0/website/cgi-bin/nph-placeholder.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,400 copying src/meme_4.6.0/website/cgi-bin/tomtom.tmpl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,403 copying src/meme_4.6.0/website/cgi-bin/meme-chip.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,405 copying src/meme_4.6.0/website/cgi-bin/Makefile.in -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,408 copying src/meme_4.6.0/website/cgi-bin/OpalTypes.pm.in -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,411 copying src/meme_4.6.0/website/cgi-bin/tomtom.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,414 copying src/meme_4.6.0/website/cgi-bin/fimo.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,416 copying src/meme_4.6.0/website/cgi-bin/get_db_list.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,419 copying src/meme_4.6.0/website/cgi-bin/db_list_view.tmpl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,421 copying src/meme_4.6.0/website/cgi-bin/tomtom_verify.tmpl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,423 copying src/meme_4.6.0/website/cgi-bin/process_request.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,425 copying src/meme_4.6.0/website/cgi-bin/spamo.tmpl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,428 copying src/meme_4.6.0/website/cgi-bin/mcast.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,430 copying src/meme_4.6.0/website/cgi-bin/Makefile -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,433 copying src/meme_4.6.0/website/cgi-bin/meme_request.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,436 copying src/meme_4.6.0/website/cgi-bin/glam2.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,438 copying src/meme_4.6.0/website/cgi-bin/querystatus.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,440 copying src/meme_4.6.0/website/cgi-bin/meme.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,443 copying src/meme_4.6.0/website/cgi-bin/nph-mcast-submit.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,445 copying src/meme_4.6.0/website/cgi-bin/README -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,447 copying src/meme_4.6.0/website/cgi-bin/job_status.tmpl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,449 copying src/meme_4.6.0/website/cgi-bin/glam2scan.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,452 copying src/meme_4.6.0/website/cgi-bin/mhmm_process_request.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,454 copying src/meme_4.6.0/website/cgi-bin/gomo.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,456 copying src/meme_4.6.0/website/cgi-bin/spamo.pl -> build/src/meme_4.6.0/website/cgi-bin 2023-09-11T02:11:46,459 copying src/meme_4.6.0/NEWS -> build/src/meme_4.6.0 2023-09-11T02:11:46,461 creating build/src/meme_4.6.0/etc 2023-09-11T02:11:46,462 copying src/meme_4.6.0/etc/mast-to-html.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,466 copying src/meme_4.6.0/etc/glam2_config.xml -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,467 copying src/meme_4.6.0/etc/hmm-text.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,469 copying src/meme_4.6.0/etc/gomo.sh.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,472 copying src/meme_4.6.0/etc/spamo-to-html.css.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,474 copying src/meme_4.6.0/etc/cisml-to-text.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,476 copying src/meme_4.6.0/etc/cisml.css -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,478 copying src/meme_4.6.0/etc/prior1.plib -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,480 copying src/meme_4.6.0/etc/glam2scan.sh -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,482 copying src/meme_4.6.0/etc/glam2_config.xml.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,484 copying src/meme_4.6.0/etc/template.svg -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,486 copying src/meme_4.6.0/etc/fimo_config.xml.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,488 copying src/meme_4.6.0/etc/fimo.sh.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,490 copying src/meme_4.6.0/etc/meme.css.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,492 copying src/meme_4.6.0/etc/fimo-to-gff3.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,494 copying src/meme_4.6.0/etc/spamo-to-html.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,498 copying src/meme_4.6.0/etc/Makefile.am -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,500 copying src/meme_4.6.0/etc/cisml-to-gff3.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,502 copying src/meme_4.6.0/etc/glam2.sh.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,504 copying src/meme_4.6.0/etc/fimo-to-wiggle.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,506 copying src/meme_4.6.0/etc/fasta_db.index -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,508 copying src/meme_4.6.0/etc/meme.css -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,510 copying src/meme_4.6.0/etc/meme_config.xml -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,513 copying src/meme_4.6.0/etc/meme-mast.sh -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,515 copying src/meme_4.6.0/etc/glam2scan_config.xml -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,519 copying src/meme_4.6.0/etc/mcast.sh.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,521 copying src/meme_4.6.0/etc/motif_logo.js.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,524 copying src/meme_4.6.0/etc/Makefile.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,527 copying src/meme_4.6.0/etc/mcast_config.xml.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,529 copying src/meme_4.6.0/etc/gomo_config.xml -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,531 copying src/meme_4.6.0/etc/timer.sh -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,532 copying src/meme_4.6.0/etc/fasta_db.csv -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,534 copying src/meme_4.6.0/etc/bkg.jpg -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,536 copying src/meme_4.6.0/etc/meme.doc -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,539 copying src/meme_4.6.0/etc/motif_logo.js -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,542 copying src/meme_4.6.0/etc/gomo_db.index -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,544 copying src/meme_4.6.0/etc/glam2.sh -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,546 copying src/meme_4.6.0/etc/meme_config.xml.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,548 copying src/meme_4.6.0/etc/constants.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,550 copying src/meme_4.6.0/etc/meme-chip -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,552 copying src/meme_4.6.0/etc/motif_db.index -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,555 copying src/meme_4.6.0/etc/spamo_graph.js.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,557 copying src/meme_4.6.0/etc/spamo_config.xml -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,559 copying src/meme_4.6.0/etc/delay_draw.js.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,562 copying src/meme_4.6.0/etc/block-diagram.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,564 copying src/meme_4.6.0/etc/meme-chip_config.xml.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,566 copying src/meme_4.6.0/etc/delay_draw.js -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,568 copying src/meme_4.6.0/etc/beadstring.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,571 copying src/meme_4.6.0/etc/db_other_genomes.csv -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,573 copying src/meme_4.6.0/etc/prior30.plib -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,576 copying src/meme_4.6.0/etc/db_general.csv -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,578 copying src/meme_4.6.0/etc/spamo_template.eps -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,580 copying src/meme_4.6.0/etc/spamo-to-html.js -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,583 copying src/meme_4.6.0/etc/gomo_db.csv -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,584 copying src/meme_4.6.0/etc/gomo-to-html.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,587 copying src/meme_4.6.0/etc/spamo-to-html.css -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,589 copying src/meme_4.6.0/etc/spamo-to-html.js.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,592 copying src/meme_4.6.0/etc/mcast.sh -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,594 copying src/meme_4.6.0/etc/spamo_config.xml.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,596 copying src/meme_4.6.0/etc/meme-chip.txt -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,599 copying src/meme_4.6.0/etc/Makefile -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,602 copying src/meme_4.6.0/etc/gomo_config.xml.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,605 copying src/meme_4.6.0/etc/help.gif -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,607 copying src/meme_4.6.0/etc/cisml-to-html.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,609 copying src/meme_4.6.0/etc/meme-mast.sh.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,611 copying src/meme_4.6.0/etc/glam2scan.sh.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,613 copying src/meme_4.6.0/etc/motif_db.csv -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,615 copying src/meme_4.6.0/etc/xsl-wrapper.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,616 copying src/meme_4.6.0/etc/tomtom_config.xml.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,618 copying src/meme_4.6.0/etc/mast_config.xml -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,621 copying src/meme_4.6.0/etc/mast.sh.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,623 copying src/meme_4.6.0/etc/gomo.sh -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,625 copying src/meme_4.6.0/etc/spamo_graph.js -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,628 copying src/meme_4.6.0/etc/fimo-to-text.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,630 copying src/meme_4.6.0/etc/template.eps -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,632 copying src/meme_4.6.0/etc/tomtom-to-html.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,635 copying src/meme_4.6.0/etc/meme-to-html.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,638 copying src/meme_4.6.0/etc/mcast_config.xml -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,640 copying src/meme_4.6.0/etc/glam2scan_config.xml.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,642 copying src/meme_4.6.0/etc/tomtom_config.xml -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,644 copying src/meme_4.6.0/etc/fimo_config.xml -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,646 copying src/meme_4.6.0/etc/constants.xsl.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,647 copying src/meme_4.6.0/etc/mast.sh -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,649 copying src/meme_4.6.0/etc/meme-chip_config.xml -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,651 copying src/meme_4.6.0/etc/fimo-to-html.xsl -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,654 copying src/meme_4.6.0/etc/fimo.sh -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,656 copying src/meme_4.6.0/etc/mast_config.xml.in -> build/src/meme_4.6.0/etc 2023-09-11T02:11:46,658 creating build/src/MDmodule 2023-09-11T02:11:46,659 copying src/MDmodule/MDmodule.c -> build/src/MDmodule 2023-09-11T02:11:46,663 copying src/MDmodule/MDmodule -> build/src/MDmodule 2023-09-11T02:11:46,666 copying src/MDmodule/COPYING -> build/src/MDmodule 2023-09-11T02:11:46,668 creating build/src/posmo 2023-09-11T02:11:46,669 copying src/posmo/clusterwd -> build/src/posmo 2023-09-11T02:11:46,672 copying src/posmo/posmo -> build/src/posmo 2023-09-11T02:11:46,675 copying src/README -> build/src 2023-09-11T02:11:46,677 copying src/COPYING -> build/src 2023-09-11T02:11:46,679 creating build/src/MotifSampler 2023-09-11T02:11:46,680 copying src/MotifSampler/CreateBackgroundModel_i386 -> build/src/MotifSampler 2023-09-11T02:11:46,699 copying src/MotifSampler/MotifSampler_x86_64 -> build/src/MotifSampler 2023-09-11T02:11:46,728 copying src/MotifSampler/CreateBackgroundModel_x86_64 -> build/src/MotifSampler 2023-09-11T02:11:46,754 copying src/MotifSampler/MotifSampler_i386 -> build/src/MotifSampler 2023-09-11T02:11:46,780 creating build/src/AMD 2023-09-11T02:11:46,781 copying src/AMD/AMD.bin -> build/src/AMD 2023-09-11T02:11:46,785 creating build/lib.linux-armv7l-cpython-311 2023-09-11T02:11:46,785 creating build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:11:46,786 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-11T02:11:47,603 compiling BioProspector... ok 2023-09-11T02:11:48,418 compiling MDmodule... ok 2023-09-11T02:16:17,724 compiling MEME... failed 2023-09-11T02:16:17,726 copying src/meme_4.6.0/src/meme.bin -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-11T02:16:17,760 copying src/MDmodule/MDmodule -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-11T02:16:17,763 copying build/src/MDmodule/MDmodule -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-11T02:16:17,767 copying src/BioProspector/BioProspector -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-11T02:16:17,770 copying build/src/BioProspector/BioProspector -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-11T02:16:17,774 copying src/posmo/posmo -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-11T02:16:17,777 copying src/posmo/clusterwd -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-11T02:16:17,780 copying src/AMD/AMD.bin -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-11T02:16:17,784 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ChIPMunk 2023-09-11T02:16:17,785 copying build/src/ChIPMunk/chipmunk.jar -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ChIPMunk 2023-09-11T02:16:17,867 copying build/src/ChIPMunk/ChIPMunk.sh -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ChIPMunk 2023-09-11T02:16:17,869 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS 2023-09-11T02:16:17,870 copying build/src/HMS/theta1.txt -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS 2023-09-11T02:16:17,872 copying build/src/HMS/hms -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS 2023-09-11T02:16:17,875 copying build/src/HMS/theta0.txt -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS 2023-09-11T02:16:17,877 copying build/src/HMS/theta3.txt -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS 2023-09-11T02:16:17,879 copying build/src/HMS/theta2.txt -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS 2023-09-11T02:16:17,881 copying build/src/MotifSampler/MotifSampler_x86_64 -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/MotifSampler 2023-09-11T02:16:17,909 copying build/src/MotifSampler/CreateBackgroundModel_x86_64 -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/CreateBackgroundModel 2023-09-11T02:16:17,935 copying build/src/Improbizer/ameme_x86_64 -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ameme 2023-09-11T02:16:17,943 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:17,944 copying src/weblogo/seqlogo -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:17,946 copying src/weblogo/test.html -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:17,948 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/release 2023-09-11T02:16:17,950 copying src/weblogo/release/.htaccess -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/release 2023-09-11T02:16:17,951 copying src/weblogo/Crooks-2004-GR-WebLogo.pdf -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:17,955 copying src/weblogo/logo.xml -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:17,958 copying src/weblogo/.cvsignore -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:17,959 copying src/weblogo/examples.html -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:17,963 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:17,964 copying src/weblogo/img/weblogo-fig1.png -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:17,967 copying src/weblogo/img/intron-exon.png -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:17,969 copying src/weblogo/img/weblogologo.png -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:17,971 copying src/weblogo/img/hth.png -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:17,973 copying src/weblogo/img/ecoli10.png -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:17,975 copying src/weblogo/img/info.gif -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:17,977 copying src/weblogo/img/lexA.png -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:17,979 copying src/weblogo/img/cap_hth.png -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:17,981 copying src/weblogo/img/argR.png -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:17,983 copying src/weblogo/img/prenyl.png -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:17,985 copying src/weblogo/img/cap_dna.png -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:17,987 copying src/weblogo/img/exon-intron.png -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:17,989 copying src/weblogo/img/hns.png -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:17,991 copying src/weblogo/img/dnaA.png -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:17,993 copying src/weblogo/img/crp_dna.png -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:17,994 copying src/weblogo/img/globins.png -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:17,996 copying src/weblogo/img/ecoli35.png -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:17,998 copying src/weblogo/index.html -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:18,000 copying src/weblogo/logo.cgi -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:18,003 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/cache 2023-09-11T02:16:18,004 copying src/weblogo/cache/.cvsignore -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/cache 2023-09-11T02:16:18,006 copying src/weblogo/cache/.htaccess -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/cache 2023-09-11T02:16:18,008 copying src/weblogo/cache/notes -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/cache 2023-09-11T02:16:18,009 copying src/weblogo/logo.css -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:18,011 copying src/weblogo/template.pm -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:18,014 copying src/weblogo/logo.pm -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:18,016 copying src/weblogo/globin.fasta -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:18,018 copying src/weblogo/.htaccess -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:18,020 copying src/weblogo/info.html -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:18,022 copying src/weblogo/clustal.dat -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:18,024 copying src/weblogo/logo.conf.init -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:18,026 copying src/weblogo/template.eps -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:18,028 copying src/weblogo/README -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:18,030 copying src/weblogo/LICENSE -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:18,037 creating build/lib.linux-armv7l-cpython-311/data 2023-09-11T02:16:18,038 copying data/__init__.py -> build/lib.linux-armv7l-cpython-311/data 2023-09-11T02:16:18,041 copying gimmemotifs/shutils.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,042 copying gimmemotifs/config.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,045 copying gimmemotifs/stats.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,047 copying gimmemotifs/report.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,050 copying gimmemotifs/tools.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,054 copying gimmemotifs/motif.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,058 copying gimmemotifs/validation.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,060 copying gimmemotifs/genome_index.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,063 copying gimmemotifs/background.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,066 copying gimmemotifs/prediction.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,069 copying gimmemotifs/utils.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,072 copying gimmemotifs/cluster.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,075 copying gimmemotifs/scanner.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,078 copying gimmemotifs/comparison.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,081 copying gimmemotifs/rocmetrics.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,084 copying gimmemotifs/rank.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,086 copying gimmemotifs/denovo.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,089 copying gimmemotifs/prediction_torque.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,092 copying gimmemotifs/maelstrom.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,096 copying gimmemotifs/_version.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,098 copying gimmemotifs/plot.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,100 copying gimmemotifs/__init__.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,102 copying gimmemotifs/moap.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,105 copying gimmemotifs/fasta.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:18,109 copying gimmemotifs/included_tools/__init__.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-11T02:16:18,112 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-11T02:16:18,113 copying gimmemotifs/commands/location.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-11T02:16:18,115 copying gimmemotifs/commands/config.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-11T02:16:18,117 copying gimmemotifs/commands/logo.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-11T02:16:18,119 copying gimmemotifs/commands/background.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-11T02:16:18,121 copying gimmemotifs/commands/prediction.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-11T02:16:18,124 copying gimmemotifs/commands/genome.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-11T02:16:18,126 copying gimmemotifs/commands/diff.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-11T02:16:18,128 copying gimmemotifs/commands/cluster.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-11T02:16:18,131 copying gimmemotifs/commands/pwmscan.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-11T02:16:18,133 copying gimmemotifs/commands/match.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-11T02:16:18,135 copying gimmemotifs/commands/motifs.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-11T02:16:18,138 copying gimmemotifs/commands/maelstrom.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-11T02:16:18,140 copying gimmemotifs/commands/roc.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-11T02:16:18,142 copying gimmemotifs/commands/__init__.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-11T02:16:18,144 copying gimmemotifs/commands/threshold.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-11T02:16:18,147 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/db 2023-09-11T02:16:18,148 copying gimmemotifs/db/__init__.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/db 2023-09-11T02:16:18,150 running egg_info 2023-09-11T02:16:18,219 writing gimmemotifs.egg-info/PKG-INFO 2023-09-11T02:16:18,222 writing dependency_links to gimmemotifs.egg-info/dependency_links.txt 2023-09-11T02:16:18,223 writing requirements to gimmemotifs.egg-info/requires.txt 2023-09-11T02:16:18,224 writing top-level names to gimmemotifs.egg-info/top_level.txt 2023-09-11T02:16:18,256 reading manifest file 'gimmemotifs.egg-info/SOURCES.txt' 2023-09-11T02:16:18,604 reading manifest template 'MANIFEST.in' 2023-09-11T02:16:19,427 adding license file 'COPYING' 2023-09-11T02:16:19,539 writing manifest file 'gimmemotifs.egg-info/SOURCES.txt' 2023-09-11T02:16:19,544 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.__pycache__' is absent from the `packages` configuration. 2023-09-11T02:16:19,544 !! 2023-09-11T02:16:19,545 ******************************************************************************** 2023-09-11T02:16:19,546 ############################ 2023-09-11T02:16:19,546 # Package would be ignored # 2023-09-11T02:16:19,547 ############################ 2023-09-11T02:16:19,547 Python recognizes 'data.__pycache__' as an importable package[^1], 2023-09-11T02:16:19,548 but it is absent from setuptools' `packages` configuration. 2023-09-11T02:16:19,549 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-11T02:16:19,550 package, please make sure that 'data.__pycache__' is explicitly added 2023-09-11T02:16:19,550 to the `packages` configuration field. 2023-09-11T02:16:19,551 Alternatively, you can also rely on setuptools' discovery methods 2023-09-11T02:16:19,552 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-11T02:16:19,552 instead of `find_packages(...)`/`find:`). 2023-09-11T02:16:19,553 You can read more about "package discovery" on setuptools documentation page: 2023-09-11T02:16:19,554 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-11T02:16:19,556 If you don't want 'data.__pycache__' to be distributed and are 2023-09-11T02:16:19,556 already explicitly excluding 'data.__pycache__' via 2023-09-11T02:16:19,557 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-11T02:16:19,557 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-11T02:16:19,558 combination with a more fine grained `package-data` configuration. 2023-09-11T02:16:19,559 You can read more about "package data files" on setuptools documentation page: 2023-09-11T02:16:19,560 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-11T02:16:19,562 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-11T02:16:19,563 even if it does not contain any `.py` files. 2023-09-11T02:16:19,563 On the other hand, currently there is no concept of package data 2023-09-11T02:16:19,564 directory, all directories are treated like packages. 2023-09-11T02:16:19,565 ******************************************************************************** 2023-09-11T02:16:19,566 !! 2023-09-11T02:16:19,567 check.warn(importable) 2023-09-11T02:16:19,567 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.bg' is absent from the `packages` configuration. 2023-09-11T02:16:19,568 !! 2023-09-11T02:16:19,569 ******************************************************************************** 2023-09-11T02:16:19,569 ############################ 2023-09-11T02:16:19,570 # Package would be ignored # 2023-09-11T02:16:19,570 ############################ 2023-09-11T02:16:19,571 Python recognizes 'data.bg' as an importable package[^1], 2023-09-11T02:16:19,571 but it is absent from setuptools' `packages` configuration. 2023-09-11T02:16:19,573 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-11T02:16:19,573 package, please make sure that 'data.bg' is explicitly added 2023-09-11T02:16:19,574 to the `packages` configuration field. 2023-09-11T02:16:19,575 Alternatively, you can also rely on setuptools' discovery methods 2023-09-11T02:16:19,575 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-11T02:16:19,576 instead of `find_packages(...)`/`find:`). 2023-09-11T02:16:19,577 You can read more about "package discovery" on setuptools documentation page: 2023-09-11T02:16:19,578 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-11T02:16:19,579 If you don't want 'data.bg' to be distributed and are 2023-09-11T02:16:19,580 already explicitly excluding 'data.bg' via 2023-09-11T02:16:19,580 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-11T02:16:19,581 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-11T02:16:19,581 combination with a more fine grained `package-data` configuration. 2023-09-11T02:16:19,583 You can read more about "package data files" on setuptools documentation page: 2023-09-11T02:16:19,584 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-11T02:16:19,586 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-11T02:16:19,587 even if it does not contain any `.py` files. 2023-09-11T02:16:19,588 On the other hand, currently there is no concept of package data 2023-09-11T02:16:19,588 directory, all directories are treated like packages. 2023-09-11T02:16:19,589 ******************************************************************************** 2023-09-11T02:16:19,591 !! 2023-09-11T02:16:19,591 check.warn(importable) 2023-09-11T02:16:19,592 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.cfg' is absent from the `packages` configuration. 2023-09-11T02:16:19,592 !! 2023-09-11T02:16:19,594 ******************************************************************************** 2023-09-11T02:16:19,594 ############################ 2023-09-11T02:16:19,595 # Package would be ignored # 2023-09-11T02:16:19,595 ############################ 2023-09-11T02:16:19,596 Python recognizes 'data.cfg' as an importable package[^1], 2023-09-11T02:16:19,597 but it is absent from setuptools' `packages` configuration. 2023-09-11T02:16:19,598 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-11T02:16:19,598 package, please make sure that 'data.cfg' is explicitly added 2023-09-11T02:16:19,599 to the `packages` configuration field. 2023-09-11T02:16:19,600 Alternatively, you can also rely on setuptools' discovery methods 2023-09-11T02:16:19,601 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-11T02:16:19,601 instead of `find_packages(...)`/`find:`). 2023-09-11T02:16:19,603 You can read more about "package discovery" on setuptools documentation page: 2023-09-11T02:16:19,604 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-11T02:16:19,605 If you don't want 'data.cfg' to be distributed and are 2023-09-11T02:16:19,605 already explicitly excluding 'data.cfg' via 2023-09-11T02:16:19,606 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-11T02:16:19,606 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-11T02:16:19,607 combination with a more fine grained `package-data` configuration. 2023-09-11T02:16:19,608 You can read more about "package data files" on setuptools documentation page: 2023-09-11T02:16:19,609 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-11T02:16:19,610 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-11T02:16:19,611 even if it does not contain any `.py` files. 2023-09-11T02:16:19,611 On the other hand, currently there is no concept of package data 2023-09-11T02:16:19,612 directory, all directories are treated like packages. 2023-09-11T02:16:19,612 ******************************************************************************** 2023-09-11T02:16:19,614 !! 2023-09-11T02:16:19,614 check.warn(importable) 2023-09-11T02:16:19,615 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.examples' is absent from the `packages` configuration. 2023-09-11T02:16:19,615 !! 2023-09-11T02:16:19,616 ******************************************************************************** 2023-09-11T02:16:19,617 ############################ 2023-09-11T02:16:19,617 # Package would be ignored # 2023-09-11T02:16:19,618 ############################ 2023-09-11T02:16:19,619 Python recognizes 'data.examples' as an importable package[^1], 2023-09-11T02:16:19,619 but it is absent from setuptools' `packages` configuration. 2023-09-11T02:16:19,621 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-11T02:16:19,622 package, please make sure that 'data.examples' is explicitly added 2023-09-11T02:16:19,622 to the `packages` configuration field. 2023-09-11T02:16:19,623 Alternatively, you can also rely on setuptools' discovery methods 2023-09-11T02:16:19,624 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-11T02:16:19,625 instead of `find_packages(...)`/`find:`). 2023-09-11T02:16:19,626 You can read more about "package discovery" on setuptools documentation page: 2023-09-11T02:16:19,628 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-11T02:16:19,629 If you don't want 'data.examples' to be distributed and are 2023-09-11T02:16:19,629 already explicitly excluding 'data.examples' via 2023-09-11T02:16:19,630 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-11T02:16:19,631 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-11T02:16:19,631 combination with a more fine grained `package-data` configuration. 2023-09-11T02:16:19,633 You can read more about "package data files" on setuptools documentation page: 2023-09-11T02:16:19,634 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-11T02:16:19,636 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-11T02:16:19,637 even if it does not contain any `.py` files. 2023-09-11T02:16:19,638 On the other hand, currently there is no concept of package data 2023-09-11T02:16:19,638 directory, all directories are treated like packages. 2023-09-11T02:16:19,639 ******************************************************************************** 2023-09-11T02:16:19,640 !! 2023-09-11T02:16:19,641 check.warn(importable) 2023-09-11T02:16:19,641 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.motif_databases' is absent from the `packages` configuration. 2023-09-11T02:16:19,642 !! 2023-09-11T02:16:19,643 ******************************************************************************** 2023-09-11T02:16:19,643 ############################ 2023-09-11T02:16:19,644 # Package would be ignored # 2023-09-11T02:16:19,644 ############################ 2023-09-11T02:16:19,645 Python recognizes 'data.motif_databases' as an importable package[^1], 2023-09-11T02:16:19,645 but it is absent from setuptools' `packages` configuration. 2023-09-11T02:16:19,646 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-11T02:16:19,647 package, please make sure that 'data.motif_databases' is explicitly added 2023-09-11T02:16:19,647 to the `packages` configuration field. 2023-09-11T02:16:19,648 Alternatively, you can also rely on setuptools' discovery methods 2023-09-11T02:16:19,649 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-11T02:16:19,649 instead of `find_packages(...)`/`find:`). 2023-09-11T02:16:19,651 You can read more about "package discovery" on setuptools documentation page: 2023-09-11T02:16:19,652 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-11T02:16:19,653 If you don't want 'data.motif_databases' to be distributed and are 2023-09-11T02:16:19,654 already explicitly excluding 'data.motif_databases' via 2023-09-11T02:16:19,654 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-11T02:16:19,655 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-11T02:16:19,656 combination with a more fine grained `package-data` configuration. 2023-09-11T02:16:19,657 You can read more about "package data files" on setuptools documentation page: 2023-09-11T02:16:19,658 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-11T02:16:19,660 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-11T02:16:19,661 even if it does not contain any `.py` files. 2023-09-11T02:16:19,661 On the other hand, currently there is no concept of package data 2023-09-11T02:16:19,662 directory, all directories are treated like packages. 2023-09-11T02:16:19,662 ******************************************************************************** 2023-09-11T02:16:19,663 !! 2023-09-11T02:16:19,664 check.warn(importable) 2023-09-11T02:16:19,664 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.score_dists' is absent from the `packages` configuration. 2023-09-11T02:16:19,665 !! 2023-09-11T02:16:19,666 ******************************************************************************** 2023-09-11T02:16:19,666 ############################ 2023-09-11T02:16:19,667 # Package would be ignored # 2023-09-11T02:16:19,667 ############################ 2023-09-11T02:16:19,668 Python recognizes 'data.score_dists' as an importable package[^1], 2023-09-11T02:16:19,668 but it is absent from setuptools' `packages` configuration. 2023-09-11T02:16:19,669 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-11T02:16:19,670 package, please make sure that 'data.score_dists' is explicitly added 2023-09-11T02:16:19,670 to the `packages` configuration field. 2023-09-11T02:16:19,672 Alternatively, you can also rely on setuptools' discovery methods 2023-09-11T02:16:19,672 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-11T02:16:19,673 instead of `find_packages(...)`/`find:`). 2023-09-11T02:16:19,673 You can read more about "package discovery" on setuptools documentation page: 2023-09-11T02:16:19,674 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-11T02:16:19,675 If you don't want 'data.score_dists' to be distributed and are 2023-09-11T02:16:19,676 already explicitly excluding 'data.score_dists' via 2023-09-11T02:16:19,676 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-11T02:16:19,677 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-11T02:16:19,677 combination with a more fine grained `package-data` configuration. 2023-09-11T02:16:19,678 You can read more about "package data files" on setuptools documentation page: 2023-09-11T02:16:19,679 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-11T02:16:19,680 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-11T02:16:19,681 even if it does not contain any `.py` files. 2023-09-11T02:16:19,681 On the other hand, currently there is no concept of package data 2023-09-11T02:16:19,682 directory, all directories are treated like packages. 2023-09-11T02:16:19,682 ******************************************************************************** 2023-09-11T02:16:19,684 !! 2023-09-11T02:16:19,684 check.warn(importable) 2023-09-11T02:16:19,685 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.templates' is absent from the `packages` configuration. 2023-09-11T02:16:19,685 !! 2023-09-11T02:16:19,686 ******************************************************************************** 2023-09-11T02:16:19,687 ############################ 2023-09-11T02:16:19,687 # Package would be ignored # 2023-09-11T02:16:19,688 ############################ 2023-09-11T02:16:19,688 Python recognizes 'data.templates' as an importable package[^1], 2023-09-11T02:16:19,689 but it is absent from setuptools' `packages` configuration. 2023-09-11T02:16:19,690 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-11T02:16:19,690 package, please make sure that 'data.templates' is explicitly added 2023-09-11T02:16:19,691 to the `packages` configuration field. 2023-09-11T02:16:19,692 Alternatively, you can also rely on setuptools' discovery methods 2023-09-11T02:16:19,693 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-11T02:16:19,693 instead of `find_packages(...)`/`find:`). 2023-09-11T02:16:19,694 You can read more about "package discovery" on setuptools documentation page: 2023-09-11T02:16:19,695 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-11T02:16:19,696 If you don't want 'data.templates' to be distributed and are 2023-09-11T02:16:19,697 already explicitly excluding 'data.templates' via 2023-09-11T02:16:19,697 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-11T02:16:19,698 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-11T02:16:19,698 combination with a more fine grained `package-data` configuration. 2023-09-11T02:16:19,699 You can read more about "package data files" on setuptools documentation page: 2023-09-11T02:16:19,700 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-11T02:16:19,702 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-11T02:16:19,703 even if it does not contain any `.py` files. 2023-09-11T02:16:19,703 On the other hand, currently there is no concept of package data 2023-09-11T02:16:19,704 directory, all directories are treated like packages. 2023-09-11T02:16:19,704 ******************************************************************************** 2023-09-11T02:16:19,705 !! 2023-09-11T02:16:19,705 check.warn(importable) 2023-09-11T02:16:19,706 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.templates.sortable' is absent from the `packages` configuration. 2023-09-11T02:16:19,706 !! 2023-09-11T02:16:19,708 ******************************************************************************** 2023-09-11T02:16:19,708 ############################ 2023-09-11T02:16:19,709 # Package would be ignored # 2023-09-11T02:16:19,709 ############################ 2023-09-11T02:16:19,710 Python recognizes 'data.templates.sortable' as an importable package[^1], 2023-09-11T02:16:19,710 but it is absent from setuptools' `packages` configuration. 2023-09-11T02:16:19,712 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-11T02:16:19,712 package, please make sure that 'data.templates.sortable' is explicitly added 2023-09-11T02:16:19,712 to the `packages` configuration field. 2023-09-11T02:16:19,713 Alternatively, you can also rely on setuptools' discovery methods 2023-09-11T02:16:19,714 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-11T02:16:19,714 instead of `find_packages(...)`/`find:`). 2023-09-11T02:16:19,715 You can read more about "package discovery" on setuptools documentation page: 2023-09-11T02:16:19,717 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-11T02:16:19,718 If you don't want 'data.templates.sortable' to be distributed and are 2023-09-11T02:16:19,719 already explicitly excluding 'data.templates.sortable' via 2023-09-11T02:16:19,719 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-11T02:16:19,720 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-11T02:16:19,720 combination with a more fine grained `package-data` configuration. 2023-09-11T02:16:19,722 You can read more about "package data files" on setuptools documentation page: 2023-09-11T02:16:19,723 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-11T02:16:19,725 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-11T02:16:19,726 even if it does not contain any `.py` files. 2023-09-11T02:16:19,726 On the other hand, currently there is no concept of package data 2023-09-11T02:16:19,727 directory, all directories are treated like packages. 2023-09-11T02:16:19,727 ******************************************************************************** 2023-09-11T02:16:19,729 !! 2023-09-11T02:16:19,729 check.warn(importable) 2023-09-11T02:16:19,730 creating build/lib.linux-armv7l-cpython-311/data/__pycache__ 2023-09-11T02:16:19,731 copying data/__pycache__/__init__.cpython-36.pyc -> build/lib.linux-armv7l-cpython-311/data/__pycache__ 2023-09-11T02:16:19,731 creating build/lib.linux-armv7l-cpython-311/data/bg 2023-09-11T02:16:19,732 copying data/bg/hg18.MotifSampler.bg -> build/lib.linux-armv7l-cpython-311/data/bg 2023-09-11T02:16:19,732 copying data/bg/hg19.MotifSampler.bg -> build/lib.linux-armv7l-cpython-311/data/bg 2023-09-11T02:16:19,733 copying data/bg/hg38.MotifSampler.bg -> build/lib.linux-armv7l-cpython-311/data/bg 2023-09-11T02:16:19,734 copying data/bg/mm10.MotifSampler.bg -> build/lib.linux-armv7l-cpython-311/data/bg 2023-09-11T02:16:19,735 copying data/bg/mm9.MotifSampler.bg -> build/lib.linux-armv7l-cpython-311/data/bg 2023-09-11T02:16:19,738 copying data/bg/xenTro2.MotifSampler.bg -> build/lib.linux-armv7l-cpython-311/data/bg 2023-09-11T02:16:19,743 creating build/lib.linux-armv7l-cpython-311/data/cfg 2023-09-11T02:16:19,749 copying data/cfg/gimmemotifs.default.cfg -> build/lib.linux-armv7l-cpython-311/data/cfg 2023-09-11T02:16:19,757 creating build/lib.linux-armv7l-cpython-311/data/examples 2023-09-11T02:16:19,774 copying data/examples/TAp73alpha.bed -> build/lib.linux-armv7l-cpython-311/data/examples 2023-09-11T02:16:19,775 copying data/examples/TAp73alpha.fa -> build/lib.linux-armv7l-cpython-311/data/examples 2023-09-11T02:16:19,776 creating build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,776 copying data/motif_databases/CIS-BP.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,777 copying data/motif_databases/CIS-BP.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,803 copying data/motif_databases/ENCODE.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,807 copying data/motif_databases/ENCODE.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,827 copying data/motif_databases/HOCOMOCOv10_HUMAN.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,829 copying data/motif_databases/HOCOMOCOv10_HUMAN.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,839 copying data/motif_databases/HOCOMOCOv10_MOUSE.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,842 copying data/motif_databases/HOCOMOCOv10_MOUSE.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,849 copying data/motif_databases/HOCOMOCOv11_HUMAN.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,852 copying data/motif_databases/HOCOMOCOv11_HUMAN.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,861 copying data/motif_databases/HOCOMOCOv11_MOUSE.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,863 copying data/motif_databases/HOCOMOCOv11_MOUSE.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,871 copying data/motif_databases/HOMER.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,874 copying data/motif_databases/HOMER.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,879 copying data/motif_databases/IMAGE.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,882 copying data/motif_databases/IMAGE.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,902 copying data/motif_databases/JASPAR2018.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,906 copying data/motif_databases/JASPAR2018.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,918 copying data/motif_databases/JASPAR2018_fungi.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,920 copying data/motif_databases/JASPAR2018_fungi.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,923 copying data/motif_databases/JASPAR2018_insects.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,926 copying data/motif_databases/JASPAR2018_insects.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,929 copying data/motif_databases/JASPAR2018_nematodes.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,931 copying data/motif_databases/JASPAR2018_nematodes.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,933 copying data/motif_databases/JASPAR2018_plants.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,935 copying data/motif_databases/JASPAR2018_plants.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,940 copying data/motif_databases/JASPAR2018_urochordates.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,942 copying data/motif_databases/JASPAR2018_urochordates.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,944 copying data/motif_databases/JASPAR2018_vertebrates.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,947 copying data/motif_databases/JASPAR2018_vertebrates.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,952 copying data/motif_databases/RSAT_insects.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,954 copying data/motif_databases/RSAT_insects.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,958 copying data/motif_databases/RSAT_plants.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,960 copying data/motif_databases/RSAT_plants.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,964 copying data/motif_databases/RSAT_vertebrates.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,966 copying data/motif_databases/RSAT_vertebrates.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,982 copying data/motif_databases/SwissRegulon.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,985 copying data/motif_databases/SwissRegulon.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,991 copying data/motif_databases/factorbook.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,994 copying data/motif_databases/factorbook.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:19,999 copying data/motif_databases/gimme.invertebrate.v1.0.pwm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:20,005 copying data/motif_databases/gimme.plant.v1.0.pwm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:20,009 copying data/motif_databases/gimme.vertebrate.v3.1.factor2motifs.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:20,013 copying data/motif_databases/gimme.vertebrate.v3.1.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:20,016 copying data/motif_databases/gimme.vertebrate.v3.1.pwm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:20,025 copying data/motif_databases/gimme.vertebrate.v5.0.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:20,033 copying data/motif_databases/gimme.vertebrate.v5.0.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-11T02:16:20,049 creating build/lib.linux-armv7l-cpython-311/data/score_dists 2023-09-11T02:16:20,050 copying data/score_dists/dic2_bg_mean_sd.txt -> build/lib.linux-armv7l-cpython-311/data/score_dists 2023-09-11T02:16:20,053 copying data/score_dists/dic2_mean_sd.txt -> build/lib.linux-armv7l-cpython-311/data/score_dists 2023-09-11T02:16:20,055 copying data/score_dists/total_wic_mean_score_dist.txt -> build/lib.linux-armv7l-cpython-311/data/score_dists 2023-09-11T02:16:20,058 creating build/lib.linux-armv7l-cpython-311/data/templates 2023-09-11T02:16:20,059 copying data/templates/cluster_template.jinja.html -> build/lib.linux-armv7l-cpython-311/data/templates 2023-09-11T02:16:20,061 copying data/templates/report_template.jinja.html -> build/lib.linux-armv7l-cpython-311/data/templates 2023-09-11T02:16:20,063 copying data/templates/star.png -> build/lib.linux-armv7l-cpython-311/data/templates 2023-09-11T02:16:20,066 copying data/templates/star_silver.png -> build/lib.linux-armv7l-cpython-311/data/templates 2023-09-11T02:16:20,069 creating build/lib.linux-armv7l-cpython-311/data/templates/sortable 2023-09-11T02:16:20,069 copying data/templates/sortable/sortable-theme-slick.css -> build/lib.linux-armv7l-cpython-311/data/templates/sortable 2023-09-11T02:16:20,072 copying data/templates/sortable/sortable.min.js -> build/lib.linux-armv7l-cpython-311/data/templates/sortable 2023-09-11T02:16:20,074 copying gimmemotifs/c_metrics.c -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:20,080 UPDATING build/lib.linux-armv7l-cpython-311/gimmemotifs/_version.py 2023-09-11T02:16:20,081 set build/lib.linux-armv7l-cpython-311/gimmemotifs/_version.py to '0.13.0' 2023-09-11T02:16:20,081 running build_ext 2023-09-11T02:16:20,592 building 'gimmemotifs.c_metrics' extension 2023-09-11T02:16:20,592 creating build/temp.linux-armv7l-cpython-311 2023-09-11T02:16:20,593 creating build/temp.linux-armv7l-cpython-311/gimmemotifs 2023-09-11T02:16:20,594 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c gimmemotifs/c_metrics.c -o build/temp.linux-armv7l-cpython-311/gimmemotifs/c_metrics.o 2023-09-11T02:16:20,946 gimmemotifs/c_metrics.c: In function ‘get_truncate_len’: 2023-09-11T02:16:20,947 gimmemotifs/c_metrics.c:285:5: warning: type of ‘len1’ defaults to ‘int’ [-Wimplicit-int] 2023-09-11T02:16:20,947 285 | int get_truncate_len(len1, len2, pos) { 2023-09-11T02:16:20,948 | ^~~~~~~~~~~~~~~~ 2023-09-11T02:16:20,949 gimmemotifs/c_metrics.c:285:5: warning: type of ‘len2’ defaults to ‘int’ [-Wimplicit-int] 2023-09-11T02:16:20,949 gimmemotifs/c_metrics.c:285:5: warning: type of ‘pos’ defaults to ‘int’ [-Wimplicit-int] 2023-09-11T02:16:20,958 gimmemotifs/c_metrics.c: At top level: 2023-09-11T02:16:20,958 gimmemotifs/c_metrics.c:864:22: warning: initialization of ‘int’ from ‘void *’ makes integer from pointer without a cast [-Wint-conversion] 2023-09-11T02:16:20,959 864 | {NULL, NULL, NULL, 0, NULL} 2023-09-11T02:16:20,960 | ^~~~ 2023-09-11T02:16:20,962 gimmemotifs/c_metrics.c:864:22: note: (near initialization for ‘CoreMethods[4].ml_flags’) 2023-09-11T02:16:20,963 gimmemotifs/c_metrics.c:864:31: warning: excess elements in struct initializer 2023-09-11T02:16:20,964 864 | {NULL, NULL, NULL, 0, NULL} 2023-09-11T02:16:20,965 | ^~~~ 2023-09-11T02:16:20,965 gimmemotifs/c_metrics.c:864:31: note: (near initialization for ‘CoreMethods[4]’) 2023-09-11T02:16:22,252 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/gimmemotifs/c_metrics.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/gimmemotifs/c_metrics.cpython-311-arm-linux-gnueabihf.so 2023-09-11T02:16:22,348 running build_scripts 2023-09-11T02:16:22,349 creating build/scripts-3.11 2023-09-11T02:16:22,350 copying and adjusting scripts/track2fasta.py -> build/scripts-3.11 2023-09-11T02:16:22,352 copying and adjusting scripts/gimme -> build/scripts-3.11 2023-09-11T02:16:22,355 copying and adjusting scripts/combine_peaks -> build/scripts-3.11 2023-09-11T02:16:22,356 copying and adjusting scripts/coverage_table -> build/scripts-3.11 2023-09-11T02:16:22,358 changing mode of build/scripts-3.11/track2fasta.py from 644 to 755 2023-09-11T02:16:22,358 changing mode of build/scripts-3.11/gimme from 644 to 755 2023-09-11T02:16:22,359 changing mode of build/scripts-3.11/combine_peaks from 644 to 755 2023-09-11T02:16:22,359 changing mode of build/scripts-3.11/coverage_table from 644 to 755 2023-09-11T02:16:22,384 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-09-11T02:16:22,385 !! 2023-09-11T02:16:22,386 ******************************************************************************** 2023-09-11T02:16:22,387 Please avoid running ``setup.py`` directly. 2023-09-11T02:16:22,387 Instead, use pypa/build, pypa/installer or other 2023-09-11T02:16:22,388 standards-based tools. 2023-09-11T02:16:22,388 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-09-11T02:16:22,389 ******************************************************************************** 2023-09-11T02:16:22,390 !! 2023-09-11T02:16:22,390 self.initialize_options() 2023-09-11T02:16:22,413 installing to build/bdist.linux-armv7l/wheel 2023-09-11T02:16:22,414 running install 2023-09-11T02:16:22,437 running install_lib 2023-09-11T02:16:22,466 creating build/bdist.linux-armv7l 2023-09-11T02:16:22,466 creating build/bdist.linux-armv7l/wheel 2023-09-11T02:16:22,468 creating build/bdist.linux-armv7l/wheel/data 2023-09-11T02:16:22,470 creating build/bdist.linux-armv7l/wheel/data/cfg 2023-09-11T02:16:22,471 copying build/lib.linux-armv7l-cpython-311/data/cfg/gimmemotifs.default.cfg -> build/bdist.linux-armv7l/wheel/data/cfg 2023-09-11T02:16:22,476 creating build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,477 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/factorbook.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,483 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_nematodes.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,486 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/RSAT_vertebrates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,508 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/factorbook.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,511 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/RSAT_plants.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,513 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_fungi.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,518 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/IMAGE.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,522 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_insects.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,525 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_urochordates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,528 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_plants.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,531 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOMER.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,536 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv11_MOUSE.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,544 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.vertebrate.v3.1.pwm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,554 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/IMAGE.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,568 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_insects.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,571 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_plants.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,577 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv11_HUMAN.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,580 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.vertebrate.v3.1.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,584 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/ENCODE.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,604 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv10_HUMAN.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,617 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.vertebrate.v5.0.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,640 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/RSAT_vertebrates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,642 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/ENCODE.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,647 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv11_HUMAN.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,659 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/CIS-BP.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,705 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.plant.v1.0.pwm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,708 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv10_MOUSE.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,710 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.invertebrate.v1.0.pwm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,715 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv10_HUMAN.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,718 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/SwissRegulon.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,720 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_nematodes.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,722 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.vertebrate.v5.0.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,730 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,742 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOMER.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,745 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/RSAT_insects.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,747 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/CIS-BP.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,796 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,799 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_vertebrates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,801 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/SwissRegulon.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,807 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.vertebrate.v3.1.factor2motifs.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,811 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/RSAT_insects.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,815 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_fungi.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,817 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/RSAT_plants.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,821 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_urochordates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,823 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv10_MOUSE.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,829 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_vertebrates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,835 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv11_MOUSE.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-11T02:16:22,838 creating build/bdist.linux-armv7l/wheel/data/bg 2023-09-11T02:16:22,839 copying build/lib.linux-armv7l-cpython-311/data/bg/mm10.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-09-11T02:16:22,840 copying build/lib.linux-armv7l-cpython-311/data/bg/hg19.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-09-11T02:16:22,842 copying build/lib.linux-armv7l-cpython-311/data/bg/xenTro2.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-09-11T02:16:22,844 copying build/lib.linux-armv7l-cpython-311/data/bg/hg38.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-09-11T02:16:22,846 copying build/lib.linux-armv7l-cpython-311/data/bg/hg18.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-09-11T02:16:22,848 copying build/lib.linux-armv7l-cpython-311/data/bg/mm9.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-09-11T02:16:22,850 creating build/bdist.linux-armv7l/wheel/data/examples 2023-09-11T02:16:22,851 copying build/lib.linux-armv7l-cpython-311/data/examples/TAp73alpha.fa -> build/bdist.linux-armv7l/wheel/data/examples 2023-09-11T02:16:22,857 copying build/lib.linux-armv7l-cpython-311/data/examples/TAp73alpha.bed -> build/bdist.linux-armv7l/wheel/data/examples 2023-09-11T02:16:22,860 creating build/bdist.linux-armv7l/wheel/data/score_dists 2023-09-11T02:16:22,861 copying build/lib.linux-armv7l-cpython-311/data/score_dists/total_wic_mean_score_dist.txt -> build/bdist.linux-armv7l/wheel/data/score_dists 2023-09-11T02:16:22,863 copying build/lib.linux-armv7l-cpython-311/data/score_dists/dic2_bg_mean_sd.txt -> build/bdist.linux-armv7l/wheel/data/score_dists 2023-09-11T02:16:22,865 copying build/lib.linux-armv7l-cpython-311/data/score_dists/dic2_mean_sd.txt -> build/bdist.linux-armv7l/wheel/data/score_dists 2023-09-11T02:16:22,868 creating build/bdist.linux-armv7l/wheel/data/templates 2023-09-11T02:16:22,869 copying build/lib.linux-armv7l-cpython-311/data/templates/cluster_template.jinja.html -> build/bdist.linux-armv7l/wheel/data/templates 2023-09-11T02:16:22,871 creating build/bdist.linux-armv7l/wheel/data/templates/sortable 2023-09-11T02:16:22,872 copying build/lib.linux-armv7l-cpython-311/data/templates/sortable/sortable.min.js -> build/bdist.linux-armv7l/wheel/data/templates/sortable 2023-09-11T02:16:22,874 copying build/lib.linux-armv7l-cpython-311/data/templates/sortable/sortable-theme-slick.css -> build/bdist.linux-armv7l/wheel/data/templates/sortable 2023-09-11T02:16:22,876 copying build/lib.linux-armv7l-cpython-311/data/templates/star.png -> build/bdist.linux-armv7l/wheel/data/templates 2023-09-11T02:16:22,878 copying build/lib.linux-armv7l-cpython-311/data/templates/report_template.jinja.html -> build/bdist.linux-armv7l/wheel/data/templates 2023-09-11T02:16:22,880 copying build/lib.linux-armv7l-cpython-311/data/templates/star_silver.png -> build/bdist.linux-armv7l/wheel/data/templates 2023-09-11T02:16:22,883 creating build/bdist.linux-armv7l/wheel/data/__pycache__ 2023-09-11T02:16:22,884 copying build/lib.linux-armv7l-cpython-311/data/__pycache__/__init__.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/data/__pycache__ 2023-09-11T02:16:22,886 copying build/lib.linux-armv7l-cpython-311/data/__init__.py -> build/bdist.linux-armv7l/wheel/data 2023-09-11T02:16:22,889 creating build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:22,890 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/c_metrics.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:22,893 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/shutils.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:22,895 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/config.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:22,897 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/stats.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:22,901 creating build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-11T02:16:22,902 creating build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/ChIPMunk 2023-09-11T02:16:22,903 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ChIPMunk/chipmunk.jar -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/ChIPMunk 2023-09-11T02:16:22,981 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ChIPMunk/ChIPMunk.sh -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/ChIPMunk 2023-09-11T02:16:22,983 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/BioProspector -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-11T02:16:22,986 creating build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:22,987 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/seqlogo -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:22,989 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/test.html -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:22,992 creating build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/release 2023-09-11T02:16:22,993 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/release/.htaccess -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/release 2023-09-11T02:16:22,995 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/Crooks-2004-GR-WebLogo.pdf -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:22,999 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/logo.xml -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:23,001 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/.cvsignore -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:23,003 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/examples.html -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:23,007 creating build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:23,008 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img/weblogo-fig1.png -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:23,011 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img/intron-exon.png -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:23,013 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img/weblogologo.png -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:23,015 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img/hth.png -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:23,017 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img/ecoli10.png -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:23,019 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img/info.gif -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:23,021 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img/lexA.png -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:23,023 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img/cap_hth.png -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:23,025 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img/argR.png -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:23,027 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img/prenyl.png -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:23,029 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img/cap_dna.png -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:23,031 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img/exon-intron.png -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:23,033 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img/hns.png -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:23,035 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img/dnaA.png -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:23,037 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img/crp_dna.png -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:23,039 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img/globins.png -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:23,041 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/img/ecoli35.png -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/img 2023-09-11T02:16:23,043 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/index.html -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:23,045 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/logo.cgi -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:23,048 creating build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/cache 2023-09-11T02:16:23,049 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/cache/.cvsignore -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/cache 2023-09-11T02:16:23,051 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/cache/.htaccess -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/cache 2023-09-11T02:16:23,053 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/cache/notes -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo/cache 2023-09-11T02:16:23,054 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/logo.css -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:23,056 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/template.pm -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:23,059 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/logo.pm -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:23,061 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/globin.fasta -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:23,063 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/.htaccess -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:23,065 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/info.html -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:23,067 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/clustal.dat -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:23,069 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/logo.conf.init -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:23,070 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/template.eps -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:23,073 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/README -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:23,075 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/weblogo/LICENSE -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/weblogo 2023-09-11T02:16:23,076 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ameme -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-11T02:16:23,085 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/clusterwd -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-11T02:16:23,088 creating build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-09-11T02:16:23,089 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS/theta1.txt -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-09-11T02:16:23,091 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS/hms -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-09-11T02:16:23,095 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS/theta0.txt -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-09-11T02:16:23,096 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS/theta3.txt -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-09-11T02:16:23,098 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS/theta2.txt -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-09-11T02:16:23,100 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/AMD.bin -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-11T02:16:23,104 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/MDmodule -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-11T02:16:23,107 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/posmo -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-11T02:16:23,111 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/meme.bin -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-11T02:16:23,155 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/CreateBackgroundModel -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-11T02:16:23,177 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/MotifSampler -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-11T02:16:23,205 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-11T02:16:23,208 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/report.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,212 creating build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-11T02:16:23,213 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/location.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-11T02:16:23,216 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/config.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-11T02:16:23,218 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/logo.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-11T02:16:23,221 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/background.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-11T02:16:23,224 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/prediction.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-11T02:16:23,226 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/genome.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-11T02:16:23,229 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/diff.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-11T02:16:23,232 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/cluster.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-11T02:16:23,234 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/pwmscan.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-11T02:16:23,237 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/match.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-11T02:16:23,240 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/motifs.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-11T02:16:23,242 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/maelstrom.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-11T02:16:23,245 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/roc.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-11T02:16:23,248 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-11T02:16:23,251 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/threshold.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-11T02:16:23,253 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,258 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/motif.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,261 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/validation.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,264 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/genome_index.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,267 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/background.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,271 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/prediction.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,274 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/utils.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,278 creating build/bdist.linux-armv7l/wheel/gimmemotifs/db 2023-09-11T02:16:23,280 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/db/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/db 2023-09-11T02:16:23,283 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/cluster.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,287 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/scanner.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,290 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/c_metrics.c -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,294 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/comparison.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,297 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/rocmetrics.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,299 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/rank.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,301 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/denovo.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,303 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/prediction_torque.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,306 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/maelstrom.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,308 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/_version.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,310 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/plot.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,312 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,313 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/moap.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,316 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/fasta.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-11T02:16:23,317 running install_egg_info 2023-09-11T02:16:23,347 Copying gimmemotifs.egg-info to build/bdist.linux-armv7l/wheel/gimmemotifs-0.13.0-py3.11.egg-info 2023-09-11T02:16:23,358 running install_scripts 2023-09-11T02:16:23,359 creating build/bdist.linux-armv7l/wheel/gimmemotifs-0.13.0.data 2023-09-11T02:16:23,360 creating build/bdist.linux-armv7l/wheel/gimmemotifs-0.13.0.data/scripts 2023-09-11T02:16:23,361 copying build/scripts-3.11/track2fasta.py -> build/bdist.linux-armv7l/wheel/gimmemotifs-0.13.0.data/scripts 2023-09-11T02:16:23,363 copying build/scripts-3.11/combine_peaks -> build/bdist.linux-armv7l/wheel/gimmemotifs-0.13.0.data/scripts 2023-09-11T02:16:23,365 copying build/scripts-3.11/coverage_table -> build/bdist.linux-armv7l/wheel/gimmemotifs-0.13.0.data/scripts 2023-09-11T02:16:23,367 copying build/scripts-3.11/gimme -> build/bdist.linux-armv7l/wheel/gimmemotifs-0.13.0.data/scripts 2023-09-11T02:16:23,369 changing mode of build/bdist.linux-armv7l/wheel/gimmemotifs-0.13.0.data/scripts/track2fasta.py to 755 2023-09-11T02:16:23,370 changing mode of build/bdist.linux-armv7l/wheel/gimmemotifs-0.13.0.data/scripts/combine_peaks to 755 2023-09-11T02:16:23,370 changing mode of build/bdist.linux-armv7l/wheel/gimmemotifs-0.13.0.data/scripts/coverage_table to 755 2023-09-11T02:16:23,371 changing mode of build/bdist.linux-armv7l/wheel/gimmemotifs-0.13.0.data/scripts/gimme to 755 2023-09-11T02:16:23,427 creating build/bdist.linux-armv7l/wheel/gimmemotifs-0.13.0.dist-info/WHEEL 2023-09-11T02:16:23,429 creating '/tmp/pip-wheel-wanhjnq2/gimmemotifs-0.13.0-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-11T02:16:23,431 adding 'data/__init__.py' 2023-09-11T02:16:23,433 adding 'data/__pycache__/__init__.cpython-36.pyc' 2023-09-11T02:16:23,435 adding 'data/bg/hg18.MotifSampler.bg' 2023-09-11T02:16:23,436 adding 'data/bg/hg19.MotifSampler.bg' 2023-09-11T02:16:23,438 adding 'data/bg/hg38.MotifSampler.bg' 2023-09-11T02:16:23,439 adding 'data/bg/mm10.MotifSampler.bg' 2023-09-11T02:16:23,441 adding 'data/bg/mm9.MotifSampler.bg' 2023-09-11T02:16:23,443 adding 'data/bg/xenTro2.MotifSampler.bg' 2023-09-11T02:16:23,444 adding 'data/cfg/gimmemotifs.default.cfg' 2023-09-11T02:16:23,449 adding 'data/examples/TAp73alpha.bed' 2023-09-11T02:16:23,558 adding 'data/examples/TAp73alpha.fa' 2023-09-11T02:16:23,652 adding 'data/motif_databases/CIS-BP.motif2factors.txt' 2023-09-11T02:16:24,024 adding 'data/motif_databases/CIS-BP.pfm' 2023-09-11T02:16:24,049 adding 'data/motif_databases/ENCODE.motif2factors.txt' 2023-09-11T02:16:24,253 adding 'data/motif_databases/ENCODE.pfm' 2023-09-11T02:16:24,265 adding 'data/motif_databases/HOCOMOCOv10_HUMAN.motif2factors.txt' 2023-09-11T02:16:24,356 adding 'data/motif_databases/HOCOMOCOv10_HUMAN.pfm' 2023-09-11T02:16:24,362 adding 'data/motif_databases/HOCOMOCOv10_MOUSE.motif2factors.txt' 2023-09-11T02:16:24,423 adding 'data/motif_databases/HOCOMOCOv10_MOUSE.pfm' 2023-09-11T02:16:24,427 adding 'data/motif_databases/HOCOMOCOv11_HUMAN.motif2factors.txt' 2023-09-11T02:16:24,465 adding 'data/motif_databases/HOCOMOCOv11_HUMAN.pfm' 2023-09-11T02:16:24,469 adding 'data/motif_databases/HOCOMOCOv11_MOUSE.motif2factors.txt' 2023-09-11T02:16:24,500 adding 'data/motif_databases/HOCOMOCOv11_MOUSE.pfm' 2023-09-11T02:16:24,505 adding 'data/motif_databases/HOMER.motif2factors.txt' 2023-09-11T02:16:24,535 adding 'data/motif_databases/HOMER.pfm' 2023-09-11T02:16:24,541 adding 'data/motif_databases/IMAGE.motif2factors.txt' 2023-09-11T02:16:24,711 adding 'data/motif_databases/IMAGE.pfm' 2023-09-11T02:16:24,724 adding 'data/motif_databases/JASPAR2018.motif2factors.txt' 2023-09-11T02:16:24,831 adding 'data/motif_databases/JASPAR2018.pfm' 2023-09-11T02:16:24,836 adding 'data/motif_databases/JASPAR2018_fungi.motif2factors.txt' 2023-09-11T02:16:24,846 adding 'data/motif_databases/JASPAR2018_fungi.pfm' 2023-09-11T02:16:24,848 adding 'data/motif_databases/JASPAR2018_insects.motif2factors.txt' 2023-09-11T02:16:24,853 adding 'data/motif_databases/JASPAR2018_insects.pfm' 2023-09-11T02:16:24,855 adding 'data/motif_databases/JASPAR2018_nematodes.motif2factors.txt' 2023-09-11T02:16:24,857 adding 'data/motif_databases/JASPAR2018_nematodes.pfm' 2023-09-11T02:16:24,860 adding 'data/motif_databases/JASPAR2018_plants.motif2factors.txt' 2023-09-11T02:16:24,900 adding 'data/motif_databases/JASPAR2018_plants.pfm' 2023-09-11T02:16:24,902 adding 'data/motif_databases/JASPAR2018_urochordates.motif2factors.txt' 2023-09-11T02:16:24,904 adding 'data/motif_databases/JASPAR2018_urochordates.pfm' 2023-09-11T02:16:24,907 adding 'data/motif_databases/JASPAR2018_vertebrates.motif2factors.txt' 2023-09-11T02:16:24,955 adding 'data/motif_databases/JASPAR2018_vertebrates.pfm' 2023-09-11T02:16:24,958 adding 'data/motif_databases/RSAT_insects.motif2factors.txt' 2023-09-11T02:16:24,983 adding 'data/motif_databases/RSAT_insects.pfm' 2023-09-11T02:16:24,985 adding 'data/motif_databases/RSAT_plants.motif2factors.txt' 2023-09-11T02:16:25,016 adding 'data/motif_databases/RSAT_plants.pfm' 2023-09-11T02:16:25,018 adding 'data/motif_databases/RSAT_vertebrates.motif2factors.txt' 2023-09-11T02:16:25,221 adding 'data/motif_databases/RSAT_vertebrates.pfm' 2023-09-11T02:16:25,231 adding 'data/motif_databases/SwissRegulon.motif2factors.txt' 2023-09-11T02:16:25,292 adding 'data/motif_databases/SwissRegulon.pfm' 2023-09-11T02:16:25,297 adding 'data/motif_databases/factorbook.motif2factors.txt' 2023-09-11T02:16:25,329 adding 'data/motif_databases/factorbook.pfm' 2023-09-11T02:16:25,362 adding 'data/motif_databases/gimme.invertebrate.v1.0.pwm' 2023-09-11T02:16:25,380 adding 'data/motif_databases/gimme.plant.v1.0.pwm' 2023-09-11T02:16:25,385 adding 'data/motif_databases/gimme.vertebrate.v3.1.factor2motifs.txt' 2023-09-11T02:16:25,389 adding 'data/motif_databases/gimme.vertebrate.v3.1.motif2factors.txt' 2023-09-11T02:16:25,493 adding 'data/motif_databases/gimme.vertebrate.v3.1.pwm' 2023-09-11T02:16:25,525 adding 'data/motif_databases/gimme.vertebrate.v5.0.motif2factors.txt' 2023-09-11T02:16:25,688 adding 'data/motif_databases/gimme.vertebrate.v5.0.pfm' 2023-09-11T02:16:25,697 adding 'data/score_dists/dic2_bg_mean_sd.txt' 2023-09-11T02:16:25,699 adding 'data/score_dists/dic2_mean_sd.txt' 2023-09-11T02:16:25,701 adding 'data/score_dists/total_wic_mean_score_dist.txt' 2023-09-11T02:16:25,702 adding 'data/templates/cluster_template.jinja.html' 2023-09-11T02:16:25,704 adding 'data/templates/report_template.jinja.html' 2023-09-11T02:16:25,706 adding 'data/templates/star.png' 2023-09-11T02:16:25,707 adding 'data/templates/star_silver.png' 2023-09-11T02:16:25,709 adding 'data/templates/sortable/sortable-theme-slick.css' 2023-09-11T02:16:25,711 adding 'data/templates/sortable/sortable.min.js' 2023-09-11T02:16:25,712 adding 'gimmemotifs/__init__.py' 2023-09-11T02:16:25,714 adding 'gimmemotifs/_version.py' 2023-09-11T02:16:25,716 adding 'gimmemotifs/background.py' 2023-09-11T02:16:25,718 adding 'gimmemotifs/c_metrics.c' 2023-09-11T02:16:25,727 adding 'gimmemotifs/c_metrics.cpython-311-arm-linux-gnueabihf.so' 2023-09-11T02:16:25,730 adding 'gimmemotifs/cluster.py' 2023-09-11T02:16:25,735 adding 'gimmemotifs/comparison.py' 2023-09-11T02:16:25,736 adding 'gimmemotifs/config.py' 2023-09-11T02:16:25,739 adding 'gimmemotifs/denovo.py' 2023-09-11T02:16:25,741 adding 'gimmemotifs/fasta.py' 2023-09-11T02:16:25,744 adding 'gimmemotifs/genome_index.py' 2023-09-11T02:16:25,747 adding 'gimmemotifs/maelstrom.py' 2023-09-11T02:16:25,750 adding 'gimmemotifs/moap.py' 2023-09-11T02:16:25,755 adding 'gimmemotifs/motif.py' 2023-09-11T02:16:25,757 adding 'gimmemotifs/plot.py' 2023-09-11T02:16:25,759 adding 'gimmemotifs/prediction.py' 2023-09-11T02:16:25,761 adding 'gimmemotifs/prediction_torque.py' 2023-09-11T02:16:25,762 adding 'gimmemotifs/rank.py' 2023-09-11T02:16:25,764 adding 'gimmemotifs/report.py' 2023-09-11T02:16:25,766 adding 'gimmemotifs/rocmetrics.py' 2023-09-11T02:16:25,770 adding 'gimmemotifs/scanner.py' 2023-09-11T02:16:25,771 adding 'gimmemotifs/shutils.py' 2023-09-11T02:16:25,773 adding 'gimmemotifs/stats.py' 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'gimmemotifs/commands/pwmscan.py' 2023-09-11T02:16:25,801 adding 'gimmemotifs/commands/roc.py' 2023-09-11T02:16:25,803 adding 'gimmemotifs/commands/threshold.py' 2023-09-11T02:16:25,805 adding 'gimmemotifs/db/__init__.py' 2023-09-11T02:16:25,820 adding 'gimmemotifs/included_tools/AMD.bin' 2023-09-11T02:16:25,830 adding 'gimmemotifs/included_tools/BioProspector' 2023-09-11T02:16:26,077 adding 'gimmemotifs/included_tools/CreateBackgroundModel' 2023-09-11T02:16:26,098 adding 'gimmemotifs/included_tools/MDmodule' 2023-09-11T02:16:26,380 adding 'gimmemotifs/included_tools/MotifSampler' 2023-09-11T02:16:26,394 adding 'gimmemotifs/included_tools/__init__.py' 2023-09-11T02:16:26,459 adding 'gimmemotifs/included_tools/ameme' 2023-09-11T02:16:26,467 adding 'gimmemotifs/included_tools/clusterwd' 2023-09-11T02:16:26,901 adding 'gimmemotifs/included_tools/meme.bin' 2023-09-11T02:16:26,923 adding 'gimmemotifs/included_tools/posmo' 2023-09-11T02:16:26,925 adding 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'gimmemotifs-0.13.0.data/scripts/gimme' 2023-09-11T02:16:27,642 adding 'gimmemotifs-0.13.0.data/scripts/track2fasta.py' 2023-09-11T02:16:27,644 adding 'gimmemotifs-0.13.0.dist-info/COPYING' 2023-09-11T02:16:27,646 adding 'gimmemotifs-0.13.0.dist-info/METADATA' 2023-09-11T02:16:27,647 adding 'gimmemotifs-0.13.0.dist-info/WHEEL' 2023-09-11T02:16:27,648 adding 'gimmemotifs-0.13.0.dist-info/top_level.txt' 2023-09-11T02:16:27,651 adding 'gimmemotifs-0.13.0.dist-info/RECORD' 2023-09-11T02:16:27,766 removing build/bdist.linux-armv7l/wheel 2023-09-11T02:16:27,964 Building wheel for gimmemotifs (setup.py): finished with status 'done' 2023-09-11T02:16:28,089 Created wheel for gimmemotifs: filename=gimmemotifs-0.13.0-cp311-cp311-linux_armv7l.whl size=10339817 sha256=d217b1e3151376436453faabdc0fd9d6f2bc09521f3abe74c7c175ca78d2045a 2023-09-11T02:16:28,090 Stored in directory: /tmp/pip-ephem-wheel-cache-ewmsyost/wheels/f5/0a/cf/6e9ab5c327f6789715bd1236ba948346d25303fc36a3ca48e3 2023-09-11T02:16:28,109 Successfully built gimmemotifs 2023-09-11T02:16:28,361 Removed build tracker: '/tmp/pip-build-tracker-ci5lgo31'