2023-09-11T06:40:52,887 Created temporary directory: /tmp/pip-build-tracker-yrjm2jg9
2023-09-11T06:40:52,888 Initialized build tracking at /tmp/pip-build-tracker-yrjm2jg9
2023-09-11T06:40:52,889 Created build tracker: /tmp/pip-build-tracker-yrjm2jg9
2023-09-11T06:40:52,889 Entered build tracker: /tmp/pip-build-tracker-yrjm2jg9
2023-09-11T06:40:52,890 Created temporary directory: /tmp/pip-wheel-gy4sfdj3
2023-09-11T06:40:52,893 Created temporary directory: /tmp/pip-ephem-wheel-cache-y7_ze_c8
2023-09-11T06:40:52,915 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-11T06:40:52,919 2 location(s) to search for versions of compare-reads:
2023-09-11T06:40:52,919 * https://pypi.org/simple/compare-reads/
2023-09-11T06:40:52,919 * https://www.piwheels.org/simple/compare-reads/
2023-09-11T06:40:52,920 Fetching project page and analyzing links: https://pypi.org/simple/compare-reads/
2023-09-11T06:40:52,920 Getting page https://pypi.org/simple/compare-reads/
2023-09-11T06:40:52,922 Found index url https://pypi.org/simple/
2023-09-11T06:40:53,063 Fetched page https://pypi.org/simple/compare-reads/ as application/vnd.pypi.simple.v1+json
2023-09-11T06:40:53,067   Found link https://files.pythonhosted.org/packages/45/ba/ccbe06383c0d8974562aa87510b776985307b350d42d3d074361c79a7af1/compare-reads-0.0.0.tar.gz (from https://pypi.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*), version: 0.0.0
2023-09-11T06:40:53,068   Found link https://files.pythonhosted.org/packages/72/64/1366b20e77d55b4277a02b3015b72c81a40705128311898f17bc1d2cd261/compare-reads-0.0.1.tar.gz (from https://pypi.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*), version: 0.0.1
2023-09-11T06:40:53,069   Skipping link: No binaries permitted for compare-reads: https://files.pythonhosted.org/packages/6d/ed/427b56f3d3ec34bb0bcd08bc20a10c7357cb54520af28d2b48c69c6aa27e/compare_reads-0.0.1-cp27-cp27m-macosx_10_6_intel.whl (from https://pypi.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:53,070   Skipping link: No binaries permitted for compare-reads: https://files.pythonhosted.org/packages/80/39/821df71efdefedde84e5b4e864ffc2f37a5397a4efebd6d4c95a24357a9e/compare_reads-0.0.1-cp27-cp27m-manylinux1_x86_64.whl (from https://pypi.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:53,070   Skipping link: No binaries permitted for compare-reads: https://files.pythonhosted.org/packages/a7/e3/afbcba872088f01073254d7d2b1e0ce96816353e7a5693f634a586d7b43e/compare_reads-0.0.1-cp27-cp27mu-manylinux1_x86_64.whl (from https://pypi.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:53,071   Skipping link: No binaries permitted for compare-reads: https://files.pythonhosted.org/packages/e6/e1/9ecdb42750123ead9f7b5856daeccfbe8c6dd076fc592dbfb1bfa27e210b/compare_reads-0.0.1-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:53,072   Skipping link: No binaries permitted for compare-reads: https://files.pythonhosted.org/packages/8b/49/9bb089dfa181c376f5ed74dd8597d576fb5574668cacef326682bbf909a5/compare_reads-0.0.1-cp36-cp36m-macosx_10_6_intel.whl (from https://pypi.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:53,072   Skipping link: No binaries permitted for compare-reads: https://files.pythonhosted.org/packages/ba/4e/b4d0336569d7898aed9eb879f211f69661fb7347876a9a0b69f9c39e5aff/compare_reads-0.0.1-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:53,073   Skipping link: No binaries permitted for compare-reads: https://files.pythonhosted.org/packages/db/5e/e05f247c44e89224cb4aaf28a6b62b0ba06fc0e07544a0822d4fc2eafa96/compare_reads-0.0.1-cp37-cp37m-macosx_10_6_intel.whl (from https://pypi.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:53,074   Skipping link: No binaries permitted for compare-reads: https://files.pythonhosted.org/packages/54/a9/dea8942b4ac2ef17c6c7afdce1d28bb549682e29255618c2d612649f8f76/compare_reads-0.0.1-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:53,075 Fetching project page and analyzing links: https://www.piwheels.org/simple/compare-reads/
2023-09-11T06:40:53,075 Getting page https://www.piwheels.org/simple/compare-reads/
2023-09-11T06:40:53,076 Found index url https://www.piwheels.org/simple/
2023-09-11T06:40:55,421 Fetched page https://www.piwheels.org/simple/compare-reads/ as text/html
2023-09-11T06:40:55,434   Skipping link: No binaries permitted for compare-reads: https://www.piwheels.org/simple/compare-reads/compare_reads-0.0.0-cp34-cp34m-linux_armv6l.whl#sha256=890999176564f850dfccb60c65ecfd0ee855d1e8714aebcb71d231752b6b344b (from https://www.piwheels.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:55,435   Skipping link: No binaries permitted for compare-reads: https://www.piwheels.org/simple/compare-reads/compare_reads-0.0.0-cp34-cp34m-linux_armv7l.whl#sha256=890999176564f850dfccb60c65ecfd0ee855d1e8714aebcb71d231752b6b344b (from https://www.piwheels.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:55,436   Skipping link: No binaries permitted for compare-reads: https://www.piwheels.org/simple/compare-reads/compare_reads-0.0.0-cp35-cp35m-linux_armv6l.whl#sha256=dfdc09dc202249b6ef89b3b7b26ccb1dc12a3a5b4817feb9277062168d2ac3b7 (from https://www.piwheels.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:55,437   Skipping link: No binaries permitted for compare-reads: https://www.piwheels.org/simple/compare-reads/compare_reads-0.0.0-cp35-cp35m-linux_armv7l.whl#sha256=dfdc09dc202249b6ef89b3b7b26ccb1dc12a3a5b4817feb9277062168d2ac3b7 (from https://www.piwheels.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:55,438   Skipping link: No binaries permitted for compare-reads: https://www.piwheels.org/simple/compare-reads/compare_reads-0.0.0-cp37-cp37m-linux_armv6l.whl#sha256=072a516562b024c76fafac72cac908465a4e81d9b7ed8b06c0c6fb8157944c8d (from https://www.piwheels.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:55,439   Skipping link: No binaries permitted for compare-reads: https://www.piwheels.org/simple/compare-reads/compare_reads-0.0.0-cp37-cp37m-linux_armv7l.whl#sha256=072a516562b024c76fafac72cac908465a4e81d9b7ed8b06c0c6fb8157944c8d (from https://www.piwheels.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:55,440   Skipping link: No binaries permitted for compare-reads: https://www.piwheels.org/simple/compare-reads/compare_reads-0.0.0-cp39-cp39-linux_armv6l.whl#sha256=c339bf70f7618bbdb367cba8a19760a7489fbddce98d940870cdcd93a0c747da (from https://www.piwheels.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:55,441   Skipping link: No binaries permitted for compare-reads: https://www.piwheels.org/simple/compare-reads/compare_reads-0.0.0-cp39-cp39-linux_armv7l.whl#sha256=c339bf70f7618bbdb367cba8a19760a7489fbddce98d940870cdcd93a0c747da (from https://www.piwheels.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:55,442   Skipping link: No binaries permitted for compare-reads: https://www.piwheels.org/simple/compare-reads/compare_reads-0.0.1-cp34-cp34m-linux_armv6l.whl#sha256=f88b17bf210558a20d2b50d3c9020f1846c970b49699601e2f2959ad0a05ca07 (from https://www.piwheels.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:55,443   Skipping link: No binaries permitted for compare-reads: https://www.piwheels.org/simple/compare-reads/compare_reads-0.0.1-cp34-cp34m-linux_armv7l.whl#sha256=f88b17bf210558a20d2b50d3c9020f1846c970b49699601e2f2959ad0a05ca07 (from https://www.piwheels.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:55,444   Skipping link: No binaries permitted for compare-reads: https://www.piwheels.org/simple/compare-reads/compare_reads-0.0.1-cp35-cp35m-linux_armv6l.whl#sha256=a02971028330da741ca1400412ec767f2c0932b6e9ceea073f466f62c7d0aa40 (from https://www.piwheels.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:55,446   Skipping link: No binaries permitted for compare-reads: https://www.piwheels.org/simple/compare-reads/compare_reads-0.0.1-cp35-cp35m-linux_armv7l.whl#sha256=a02971028330da741ca1400412ec767f2c0932b6e9ceea073f466f62c7d0aa40 (from https://www.piwheels.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:55,447   Skipping link: No binaries permitted for compare-reads: https://www.piwheels.org/simple/compare-reads/compare_reads-0.0.1-cp37-cp37m-linux_armv6l.whl#sha256=3ebdaa5eabbde951e3786336da6c19fb0a8e9188fa92ed51f5a8178b942de61f (from https://www.piwheels.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:55,448   Skipping link: No binaries permitted for compare-reads: https://www.piwheels.org/simple/compare-reads/compare_reads-0.0.1-cp37-cp37m-linux_armv7l.whl#sha256=3ebdaa5eabbde951e3786336da6c19fb0a8e9188fa92ed51f5a8178b942de61f (from https://www.piwheels.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:55,448   Skipping link: No binaries permitted for compare-reads: https://www.piwheels.org/simple/compare-reads/compare_reads-0.0.1-cp39-cp39-linux_armv6l.whl#sha256=d98030ce2a08e81dbb08a24cc7a5fb7269dc1ebf4197b923fcc42700ffc03fcb (from https://www.piwheels.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:55,449   Skipping link: No binaries permitted for compare-reads: https://www.piwheels.org/simple/compare-reads/compare_reads-0.0.1-cp39-cp39-linux_armv7l.whl#sha256=d98030ce2a08e81dbb08a24cc7a5fb7269dc1ebf4197b923fcc42700ffc03fcb (from https://www.piwheels.org/simple/compare-reads/) (requires-python:>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*)
2023-09-11T06:40:55,451 Skipping link: not a file: https://www.piwheels.org/simple/compare-reads/
2023-09-11T06:40:55,451 Skipping link: not a file: https://pypi.org/simple/compare-reads/
2023-09-11T06:40:55,495 Given no hashes to check 1 links for project 'compare-reads': discarding no candidates
2023-09-11T06:40:55,522 Collecting compare-reads==0.0.1
2023-09-11T06:40:55,525   Created temporary directory: /tmp/pip-unpack-f7kreyty
2023-09-11T06:40:55,763   Downloading compare-reads-0.0.1.tar.gz (47 kB)
2023-09-11T06:40:55,909   Added compare-reads==0.0.1 from https://files.pythonhosted.org/packages/72/64/1366b20e77d55b4277a02b3015b72c81a40705128311898f17bc1d2cd261/compare-reads-0.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-yrjm2jg9'
2023-09-11T06:40:55,911   Running setup.py (path:/tmp/pip-wheel-gy4sfdj3/compare-reads_190356cea7e74e7482a7184a24769b57/setup.py) egg_info for package compare-reads
2023-09-11T06:40:55,912   Created temporary directory: /tmp/pip-pip-egg-info-qi36e2de
2023-09-11T06:40:55,912   Preparing metadata (setup.py): started
2023-09-11T06:40:55,914   Running command python setup.py egg_info
2023-09-11T06:40:56,659   /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
2023-09-11T06:40:56,659   !!

2023-09-11T06:40:56,661           ********************************************************************************
2023-09-11T06:40:56,661           Requirements should be satisfied by a PEP 517 installer.
2023-09-11T06:40:56,662           If you are using pip, you can try `pip install --use-pep517`.
2023-09-11T06:40:56,663           ********************************************************************************

2023-09-11T06:40:56,664   !!
2023-09-11T06:40:56,664     dist.fetch_build_eggs(dist.setup_requires)
2023-09-11T06:53:55,872   running egg_info
2023-09-11T06:53:55,874   creating /tmp/pip-pip-egg-info-qi36e2de/compare_reads.egg-info
2023-09-11T06:53:55,899   writing /tmp/pip-pip-egg-info-qi36e2de/compare_reads.egg-info/PKG-INFO
2023-09-11T06:53:55,904   writing dependency_links to /tmp/pip-pip-egg-info-qi36e2de/compare_reads.egg-info/dependency_links.txt
2023-09-11T06:53:55,906   writing requirements to /tmp/pip-pip-egg-info-qi36e2de/compare_reads.egg-info/requires.txt
2023-09-11T06:53:55,907   writing top-level names to /tmp/pip-pip-egg-info-qi36e2de/compare_reads.egg-info/top_level.txt
2023-09-11T06:53:55,909   writing manifest file '/tmp/pip-pip-egg-info-qi36e2de/compare_reads.egg-info/SOURCES.txt'
2023-09-11T06:53:55,988   reading manifest file '/tmp/pip-pip-egg-info-qi36e2de/compare_reads.egg-info/SOURCES.txt'
2023-09-11T06:53:55,990   reading manifest template 'MANIFEST.in'
2023-09-11T06:53:55,999   warning: no files found matching 'appveyor.yml'
2023-09-11T06:53:56,000   warning: no previously-included files matching '*.py[cod]' found anywhere in distribution
2023-09-11T06:53:56,001   warning: no previously-included files matching '__pycache__' found anywhere in distribution
2023-09-11T06:53:56,002   warning: no previously-included files matching '*.so' found anywhere in distribution
2023-09-11T06:53:56,003   warning: no previously-included files matching '*.dylib' found anywhere in distribution
2023-09-11T06:53:56,003   adding license file 'LICENSE'
2023-09-11T06:53:56,004   adding license file 'AUTHORS.rst'
2023-09-11T06:53:56,006   writing manifest file '/tmp/pip-pip-egg-info-qi36e2de/compare_reads.egg-info/SOURCES.txt'
2023-09-11T06:53:56,122   Preparing metadata (setup.py): finished with status 'done'
2023-09-11T06:53:56,126   Source in /tmp/pip-wheel-gy4sfdj3/compare-reads_190356cea7e74e7482a7184a24769b57 has version 0.0.1, which satisfies requirement compare-reads==0.0.1 from https://files.pythonhosted.org/packages/72/64/1366b20e77d55b4277a02b3015b72c81a40705128311898f17bc1d2cd261/compare-reads-0.0.1.tar.gz
2023-09-11T06:53:56,128   Removed compare-reads==0.0.1 from https://files.pythonhosted.org/packages/72/64/1366b20e77d55b4277a02b3015b72c81a40705128311898f17bc1d2cd261/compare-reads-0.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-yrjm2jg9'
2023-09-11T06:53:56,135 Created temporary directory: /tmp/pip-unpack-p_04rb5h
2023-09-11T06:53:56,136 Created temporary directory: /tmp/pip-unpack-nwmvti4t
2023-09-11T06:53:56,140 Building wheels for collected packages: compare-reads
2023-09-11T06:53:56,145   Created temporary directory: /tmp/pip-wheel-5fm6t25j
2023-09-11T06:53:56,146   Building wheel for compare-reads (setup.py): started
2023-09-11T06:53:56,147   Destination directory: /tmp/pip-wheel-5fm6t25j
2023-09-11T06:53:56,148   Running command python setup.py bdist_wheel
2023-09-11T06:53:56,934   /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
2023-09-11T06:53:56,934   !!

2023-09-11T06:53:56,935           ********************************************************************************
2023-09-11T06:53:56,936           Requirements should be satisfied by a PEP 517 installer.
2023-09-11T06:53:56,936           If you are using pip, you can try `pip install --use-pep517`.
2023-09-11T06:53:56,937           ********************************************************************************

2023-09-11T06:53:56,938   !!
2023-09-11T06:53:56,939     dist.fetch_build_eggs(dist.setup_requires)
2023-09-11T06:53:57,448   running bdist_wheel
2023-09-11T06:53:57,519   running build
2023-09-11T06:53:57,520   running build_py
2023-09-11T06:53:57,547   creating build
2023-09-11T06:53:57,547   creating build/lib.linux-armv7l-cpython-311
2023-09-11T06:53:57,548   creating build/lib.linux-armv7l-cpython-311/compare_reads
2023-09-11T06:53:57,549   copying src/compare_reads/__init__.py -> build/lib.linux-armv7l-cpython-311/compare_reads
2023-09-11T06:53:57,551   running egg_info
2023-09-11T06:53:57,600   writing src/compare_reads.egg-info/PKG-INFO
2023-09-11T06:53:57,603   writing dependency_links to src/compare_reads.egg-info/dependency_links.txt
2023-09-11T06:53:57,604   writing requirements to src/compare_reads.egg-info/requires.txt
2023-09-11T06:53:57,605   writing top-level names to src/compare_reads.egg-info/top_level.txt
2023-09-11T06:53:57,632   reading manifest file 'src/compare_reads.egg-info/SOURCES.txt'
2023-09-11T06:53:57,635   reading manifest template 'MANIFEST.in'
2023-09-11T06:53:57,640   warning: no files found matching 'appveyor.yml'
2023-09-11T06:53:57,641   warning: no previously-included files matching '*.py[cod]' found anywhere in distribution
2023-09-11T06:53:57,641   warning: no previously-included files matching '__pycache__' found anywhere in distribution
2023-09-11T06:53:57,642   warning: no previously-included files matching '*.so' found anywhere in distribution
2023-09-11T06:53:57,643   warning: no previously-included files matching '*.dylib' found anywhere in distribution
2023-09-11T06:53:57,643   adding license file 'LICENSE'
2023-09-11T06:53:57,644   adding license file 'AUTHORS.rst'
2023-09-11T06:53:57,646   writing manifest file 'src/compare_reads.egg-info/SOURCES.txt'
2023-09-11T06:53:57,649   copying src/compare_reads/_compare_reads.c -> build/lib.linux-armv7l-cpython-311/compare_reads
2023-09-11T06:53:57,655   copying src/compare_reads/_compare_reads.pxd -> build/lib.linux-armv7l-cpython-311/compare_reads
2023-09-11T06:53:57,657   copying src/compare_reads/_compare_reads.pyx -> build/lib.linux-armv7l-cpython-311/compare_reads
2023-09-11T06:53:57,659   copying src/compare_reads/strnum_cmp.c -> build/lib.linux-armv7l-cpython-311/compare_reads
2023-09-11T06:53:57,661   running build_ext
2023-09-11T06:53:59,558   Compiling src/compare_reads/_compare_reads.pyx because it changed.
2023-09-11T06:53:59,559   [1/1] Cythonizing src/compare_reads/_compare_reads.pyx
2023-09-11T06:54:00,603   /usr/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-gy4sfdj3/compare-reads_190356cea7e74e7482a7184a24769b57/src/compare_reads/_compare_reads.pxd
2023-09-11T06:54:00,604     tree = Parsing.p_module(s, pxd, full_module_name)
2023-09-11T06:54:03,701   building 'compare_reads._compare_reads' extension
2023-09-11T06:54:03,702   creating build/temp.linux-armv7l-cpython-311
2023-09-11T06:54:03,702   creating build/temp.linux-armv7l-cpython-311/src
2023-09-11T06:54:03,703   creating build/temp.linux-armv7l-cpython-311/src/compare_reads
2023-09-11T06:54:03,704   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/compare_reads -I/usr/include/python3.11 -I/tmp/pip-wheel-gy4sfdj3/compare-reads_190356cea7e74e7482a7184a24769b57/.eggs/pysam-0.21.0-py3.11-linux-armv7l.egg/pysam -I/tmp/pip-wheel-gy4sfdj3/compare-reads_190356cea7e74e7482a7184a24769b57/.eggs/pysam-0.21.0-py3.11-linux-armv7l.egg/pysam/include/htslib -I/tmp/pip-wheel-gy4sfdj3/compare-reads_190356cea7e74e7482a7184a24769b57/.eggs/pysam-0.21.0-py3.11-linux-armv7l.egg/pysam/include/samtools -c src/compare_reads/_compare_reads.c -o build/temp.linux-armv7l-cpython-311/src/compare_reads/_compare_reads.o
2023-09-11T06:54:04,758   In file included from /tmp/pip-wheel-gy4sfdj3/compare-reads_190356cea7e74e7482a7184a24769b57/.eggs/pysam-0.21.0-py3.11-linux-armv7l.egg/pysam/pysam_stream.h:4,
2023-09-11T06:54:04,759                    from src/compare_reads/_compare_reads.c:1214:
2023-09-11T06:54:04,760   /tmp/pip-wheel-gy4sfdj3/compare-reads_190356cea7e74e7482a7184a24769b57/.eggs/pysam-0.21.0-py3.11-linux-armv7l.egg/pysam/include/htslib/htslib/kseq.h:185:19: warning: ‘kseq_read’ defined but not used [-Wunused-function]
2023-09-11T06:54:04,760     185 |         SCOPE int kseq_read(kseq_t *seq) \
2023-09-11T06:54:04,761         |                   ^~~~~~~~~
2023-09-11T06:54:04,762   /tmp/pip-wheel-gy4sfdj3/compare-reads_190356cea7e74e7482a7184a24769b57/.eggs/pysam-0.21.0-py3.11-linux-armv7l.egg/pysam/include/htslib/htslib/kseq.h:238:9: note: in expansion of macro ‘__KSEQ_READ’
2023-09-11T06:54:04,762     238 |         __KSEQ_READ(SCOPE)
2023-09-11T06:54:04,763         |         ^~~~~~~~~~~
2023-09-11T06:54:04,763   /tmp/pip-wheel-gy4sfdj3/compare-reads_190356cea7e74e7482a7184a24769b57/.eggs/pysam-0.21.0-py3.11-linux-armv7l.egg/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’
2023-09-11T06:54:04,763     240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read)
2023-09-11T06:54:04,764         |                                   ^~~~~~~~~~
2023-09-11T06:54:04,764   /tmp/pip-wheel-gy4sfdj3/compare-reads_190356cea7e74e7482a7184a24769b57/.eggs/pysam-0.21.0-py3.11-linux-armv7l.egg/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’
2023-09-11T06:54:04,765       9 | KSEQ_INIT(BGZF *, bgzf_read)
2023-09-11T06:54:04,765         | ^~~~~~~~~
2023-09-11T06:54:04,766   /tmp/pip-wheel-gy4sfdj3/compare-reads_190356cea7e74e7482a7184a24769b57/.eggs/pysam-0.21.0-py3.11-linux-armv7l.egg/pysam/include/htslib/htslib/kseq.h:171:20: warning: ‘kseq_destroy’ defined but not used [-Wunused-function]
2023-09-11T06:54:04,766     171 |         SCOPE void kseq_destroy(kseq_t *ks)                                                                     \
2023-09-11T06:54:04,767         |                    ^~~~~~~~~~~~
2023-09-11T06:54:04,767   /tmp/pip-wheel-gy4sfdj3/compare-reads_190356cea7e74e7482a7184a24769b57/.eggs/pysam-0.21.0-py3.11-linux-armv7l.egg/pysam/include/htslib/htslib/kseq.h:237:9: note: in expansion of macro ‘__KSEQ_BASIC’
2023-09-11T06:54:04,768     237 |         __KSEQ_BASIC(SCOPE, type_t)                                     \
2023-09-11T06:54:04,768         |         ^~~~~~~~~~~~
2023-09-11T06:54:04,769   /tmp/pip-wheel-gy4sfdj3/compare-reads_190356cea7e74e7482a7184a24769b57/.eggs/pysam-0.21.0-py3.11-linux-armv7l.egg/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’
2023-09-11T06:54:04,770     240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read)
2023-09-11T06:54:04,771         |                                   ^~~~~~~~~~
2023-09-11T06:54:04,771   /tmp/pip-wheel-gy4sfdj3/compare-reads_190356cea7e74e7482a7184a24769b57/.eggs/pysam-0.21.0-py3.11-linux-armv7l.egg/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’
2023-09-11T06:54:04,772       9 | KSEQ_INIT(BGZF *, bgzf_read)
2023-09-11T06:54:04,773         | ^~~~~~~~~
2023-09-11T06:54:04,774   /tmp/pip-wheel-gy4sfdj3/compare-reads_190356cea7e74e7482a7184a24769b57/.eggs/pysam-0.21.0-py3.11-linux-armv7l.egg/pysam/include/htslib/htslib/kseq.h:165:23: warning: ‘kseq_init’ defined but not used [-Wunused-function]
2023-09-11T06:54:04,774     165 |         SCOPE kseq_t *kseq_init(type_t fd)                                                                      \
2023-09-11T06:54:04,775         |                       ^~~~~~~~~
2023-09-11T06:54:04,775   /tmp/pip-wheel-gy4sfdj3/compare-reads_190356cea7e74e7482a7184a24769b57/.eggs/pysam-0.21.0-py3.11-linux-armv7l.egg/pysam/include/htslib/htslib/kseq.h:237:9: note: in expansion of macro ‘__KSEQ_BASIC’
2023-09-11T06:54:04,776     237 |         __KSEQ_BASIC(SCOPE, type_t)                                     \
2023-09-11T06:54:04,777         |         ^~~~~~~~~~~~
2023-09-11T06:54:04,777   /tmp/pip-wheel-gy4sfdj3/compare-reads_190356cea7e74e7482a7184a24769b57/.eggs/pysam-0.21.0-py3.11-linux-armv7l.egg/pysam/include/htslib/htslib/kseq.h:240:35: note: in expansion of macro ‘KSEQ_INIT2’
2023-09-11T06:54:04,778     240 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read)
2023-09-11T06:54:04,779         |                                   ^~~~~~~~~~
2023-09-11T06:54:04,779   /tmp/pip-wheel-gy4sfdj3/compare-reads_190356cea7e74e7482a7184a24769b57/.eggs/pysam-0.21.0-py3.11-linux-armv7l.egg/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’
2023-09-11T06:54:04,780       9 | KSEQ_INIT(BGZF *, bgzf_read)
2023-09-11T06:54:04,781         | ^~~~~~~~~
2023-09-11T06:54:07,859   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/compare_reads/_compare_reads.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/compare_reads/_compare_reads.cpython-311-arm-linux-gnueabihf.so
2023-09-11T06:54:08,007   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-09-11T06:54:08,007   !!

2023-09-11T06:54:08,009           ********************************************************************************
2023-09-11T06:54:08,010           Please avoid running ``setup.py`` directly.
2023-09-11T06:54:08,011           Instead, use pypa/build, pypa/installer or other
2023-09-11T06:54:08,011           standards-based tools.

2023-09-11T06:54:08,013           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-09-11T06:54:08,014           ********************************************************************************

2023-09-11T06:54:08,016   !!
2023-09-11T06:54:08,018     self.initialize_options()
2023-09-11T06:54:08,042   installing to build/bdist.linux-armv7l/wheel
2023-09-11T06:54:08,043   running install
2023-09-11T06:54:08,066   running install_lib
2023-09-11T06:54:08,094   creating build/bdist.linux-armv7l
2023-09-11T06:54:08,094   creating build/bdist.linux-armv7l/wheel
2023-09-11T06:54:08,096   creating build/bdist.linux-armv7l/wheel/compare_reads
2023-09-11T06:54:08,097   copying build/lib.linux-armv7l-cpython-311/compare_reads/_compare_reads.pxd -> build/bdist.linux-armv7l/wheel/compare_reads
2023-09-11T06:54:08,100   copying build/lib.linux-armv7l-cpython-311/compare_reads/_compare_reads.c -> build/bdist.linux-armv7l/wheel/compare_reads
2023-09-11T06:54:08,106   copying build/lib.linux-armv7l-cpython-311/compare_reads/__init__.py -> build/bdist.linux-armv7l/wheel/compare_reads
2023-09-11T06:54:08,108   copying build/lib.linux-armv7l-cpython-311/compare_reads/_compare_reads.pyx -> build/bdist.linux-armv7l/wheel/compare_reads
2023-09-11T06:54:08,110   copying build/lib.linux-armv7l-cpython-311/compare_reads/strnum_cmp.c -> build/bdist.linux-armv7l/wheel/compare_reads
2023-09-11T06:54:08,113   copying build/lib.linux-armv7l-cpython-311/compare_reads/_compare_reads.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/compare_reads
2023-09-11T06:54:08,119   running install_egg_info
2023-09-11T06:54:08,148   Copying src/compare_reads.egg-info to build/bdist.linux-armv7l/wheel/compare_reads-0.0.1-py3.11.egg-info
2023-09-11T06:54:08,165   running install_scripts
2023-09-11T06:54:08,221   creating build/bdist.linux-armv7l/wheel/compare_reads-0.0.1.dist-info/WHEEL
2023-09-11T06:54:08,224   creating '/tmp/pip-wheel-5fm6t25j/compare_reads-0.0.1-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-09-11T06:54:08,227   adding 'compare_reads/__init__.py'
2023-09-11T06:54:08,244   adding 'compare_reads/_compare_reads.c'
2023-09-11T06:54:08,289   adding 'compare_reads/_compare_reads.cpython-311-arm-linux-gnueabihf.so'
2023-09-11T06:54:08,292   adding 'compare_reads/_compare_reads.pxd'
2023-09-11T06:54:08,293   adding 'compare_reads/_compare_reads.pyx'
2023-09-11T06:54:08,294   adding 'compare_reads/strnum_cmp.c'
2023-09-11T06:54:08,297   adding 'compare_reads-0.0.1.dist-info/AUTHORS.rst'
2023-09-11T06:54:08,298   adding 'compare_reads-0.0.1.dist-info/LICENSE'
2023-09-11T06:54:08,299   adding 'compare_reads-0.0.1.dist-info/METADATA'
2023-09-11T06:54:08,300   adding 'compare_reads-0.0.1.dist-info/WHEEL'
2023-09-11T06:54:08,301   adding 'compare_reads-0.0.1.dist-info/top_level.txt'
2023-09-11T06:54:08,302   adding 'compare_reads-0.0.1.dist-info/RECORD'
2023-09-11T06:54:08,304   removing build/bdist.linux-armv7l/wheel
2023-09-11T06:54:08,726   Building wheel for compare-reads (setup.py): finished with status 'done'
2023-09-11T06:54:08,729   Created wheel for compare-reads: filename=compare_reads-0.0.1-cp311-cp311-linux_armv7l.whl size=126465 sha256=c7d0d3695e6dbd38ae3409d47afa2a52e431c4b9851158ef4b1062298b450d14
2023-09-11T06:54:08,731   Stored in directory: /tmp/pip-ephem-wheel-cache-y7_ze_c8/wheels/c8/2c/c6/122c8e417c7c042ede0563885a47e7f554385c818cb1551a3a
2023-09-11T06:54:08,740 Successfully built compare-reads
2023-09-11T06:54:08,746 Removed build tracker: '/tmp/pip-build-tracker-yrjm2jg9'