2023-09-11T06:53:52,709 Created temporary directory: /tmp/pip-build-tracker-vraus2lt
2023-09-11T06:53:52,710 Initialized build tracking at /tmp/pip-build-tracker-vraus2lt
2023-09-11T06:53:52,710 Created build tracker: /tmp/pip-build-tracker-vraus2lt
2023-09-11T06:53:52,711 Entered build tracker: /tmp/pip-build-tracker-vraus2lt
2023-09-11T06:53:52,712 Created temporary directory: /tmp/pip-wheel-6qati27u
2023-09-11T06:53:52,715 Created temporary directory: /tmp/pip-ephem-wheel-cache-gn_cwyhv
2023-09-11T06:53:52,736 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-11T06:53:52,740 2 location(s) to search for versions of forgi:
2023-09-11T06:53:52,740 * https://pypi.org/simple/forgi/
2023-09-11T06:53:52,740 * https://www.piwheels.org/simple/forgi/
2023-09-11T06:53:52,741 Fetching project page and analyzing links: https://pypi.org/simple/forgi/
2023-09-11T06:53:52,741 Getting page https://pypi.org/simple/forgi/
2023-09-11T06:53:52,743 Found index url https://pypi.org/simple/
2023-09-11T06:53:52,882 Fetched page https://pypi.org/simple/forgi/ as application/vnd.pypi.simple.v1+json
2023-09-11T06:53:52,887   Skipping link: unsupported archive format: .exe: https://files.pythonhosted.org/packages/66/40/1e40afc410037da78b10b08eb1f681c3c4d4514abf774f93f255b9746b90/forgi-0.1.linux-x86_64.exe (from https://pypi.org/simple/forgi/)
2023-09-11T06:53:52,888   Found link https://files.pythonhosted.org/packages/e7/1a/d38508a857d7ac4c4e75464529fa9834bbaf96078e62d6b93e831c86c0bb/forgi-0.1.tar.gz (from https://pypi.org/simple/forgi/), version: 0.1
2023-09-11T06:53:52,888   Skipping link: unsupported archive format: .exe: https://files.pythonhosted.org/packages/26/0f/024735a6e6d3077c5bfb5cfc2c398a66d293e4a6192ee88357edbeb66f09/forgi-0.20.linux-x86_64.exe (from https://pypi.org/simple/forgi/)
2023-09-11T06:53:52,889   Found link https://files.pythonhosted.org/packages/f8/47/5b68cdb14c10ff946b7b53d130dbf644cdcb8663aee0f4a7a467094fa8e9/forgi-0.20.tar.gz (from https://pypi.org/simple/forgi/), version: 0.20
2023-09-11T06:53:52,889   Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/e4/70/94d2e42b6a8f96fd38e57fe1d3cc05335ac2e7e3b6599223701321356e0e/forgi-1.0-py2.py3-none-any.whl (from https://pypi.org/simple/forgi/)
2023-09-11T06:53:52,890   Found link https://files.pythonhosted.org/packages/16/4e/a9b9cb9341a045b4febd75549314df78b7a09e801bdb835b10576b938b9d/forgi-1.0.tar.gz (from https://pypi.org/simple/forgi/), version: 1.0
2023-09-11T06:53:52,891   Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/86/f7/812cba6327ac40a33d986b7d698a6d2193e64e7dfcd570abc6b4f86aede5/forgi-1.1-py2.py3-none-any.whl (from https://pypi.org/simple/forgi/)
2023-09-11T06:53:52,891   Found link https://files.pythonhosted.org/packages/61/29/273df63c66c18e8909aff10f66e9406f598f656659894405b1ad10b20654/forgi-1.1.tar.gz (from https://pypi.org/simple/forgi/), version: 1.1
2023-09-11T06:53:52,892   Found link https://files.pythonhosted.org/packages/69/94/583f97307ee7c68d8b3844c2171dd13d79aa64d38a4f05e7847bd7d98e28/forgi-2.0.1.tar.gz (from https://pypi.org/simple/forgi/), version: 2.0.1
2023-09-11T06:53:52,893   Found link https://files.pythonhosted.org/packages/ea/95/2fdfc3636ce7957d2581ef9813cd49af123afd718c4bcb41486dadd5babc/forgi-2.0.2.tar.gz (from https://pypi.org/simple/forgi/), version: 2.0.2
2023-09-11T06:53:52,894   Found link https://files.pythonhosted.org/packages/61/6d/54b072d5cb0acb992b981772e33d7f7a0dca1f4e7bbc1e5c799fa0eb380d/forgi-2.1.1.tar.gz (from https://pypi.org/simple/forgi/), version: 2.1.1
2023-09-11T06:53:52,894   Found link https://files.pythonhosted.org/packages/bb/50/206944d64095dd07960398f5d350a00c96e7f29689c64ae559292ba7cd20/forgi-2.1.2.tar.gz (from https://pypi.org/simple/forgi/), version: 2.1.2
2023-09-11T06:53:52,895   Found link https://files.pythonhosted.org/packages/cd/d8/31485b259d48619ff38ea6aa48ac2e5a04bd069a41846f2bc5b6b3d8b740/forgi-2.2.0.tar.gz (from https://pypi.org/simple/forgi/), version: 2.2.0
2023-09-11T06:53:52,896   Found link https://files.pythonhosted.org/packages/6b/6c/0767b9c276049346a1d6cc262d0adc99cda5a9eef64b590840677adf08ad/forgi-2.2.1.tar.gz (from https://pypi.org/simple/forgi/), version: 2.2.1
2023-09-11T06:53:52,897   Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/41/96/74f23211eae17a7c2bd9b5683a4affa73e0197de09f081786c44839a3b86/forgi-2.2.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/forgi/)
2023-09-11T06:53:52,898   Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/c0/1f/80dfe394416cb3001586ef7f89203ea3e89ff4ecd27025927efeb6e52185/forgi-2.2.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/forgi/)
2023-09-11T06:53:52,898   Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/64/9e/ff9b8e397f4422341d493659e4fd298e257869eba6f42ef30b640f565c04/forgi-2.2.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/forgi/)
2023-09-11T06:53:52,898   Skipping link: No binaries permitted for forgi: https://files.pythonhosted.org/packages/4d/87/785b11d57bf235cf35de5eae23b455a5281de184d08265a256a0c375bf39/forgi-2.2.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/forgi/)
2023-09-11T06:53:52,899   Found link https://files.pythonhosted.org/packages/15/04/70c9e02d6c1cdd4a645f890411cc9cc346945d3fd4297c51185a883e042e/forgi-2.2.2.tar.gz (from https://pypi.org/simple/forgi/), version: 2.2.2
2023-09-11T06:53:52,900 Fetching project page and analyzing links: https://www.piwheels.org/simple/forgi/
2023-09-11T06:53:52,900 Getting page https://www.piwheels.org/simple/forgi/
2023-09-11T06:53:52,901 Found index url https://www.piwheels.org/simple/
2023-09-11T06:53:53,155 Fetched page https://www.piwheels.org/simple/forgi/ as text/html
2023-09-11T06:53:53,164   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.2.2-cp39-cp39-linux_armv7l.whl#sha256=5d0330ff6aa2005e316c859df18383e5edc15ef2a55219d65fbd44614699955f (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,164   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.2.2-cp39-cp39-linux_armv6l.whl#sha256=5d0330ff6aa2005e316c859df18383e5edc15ef2a55219d65fbd44614699955f (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,165   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.2.2-cp37-cp37m-linux_armv7l.whl#sha256=4fd5cad6f7136b0688788fb72048f1db223ca322d71fd82290526b5e24638e90 (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,165   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.2.2-cp37-cp37m-linux_armv6l.whl#sha256=4fd5cad6f7136b0688788fb72048f1db223ca322d71fd82290526b5e24638e90 (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,166   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.2.1-cp37-cp37m-linux_armv7l.whl#sha256=e18b86582585f10c731579fb798ccdd9c07b446511f4285502befb39c9e03ab1 (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,167   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.2.1-cp37-cp37m-linux_armv6l.whl#sha256=e18b86582585f10c731579fb798ccdd9c07b446511f4285502befb39c9e03ab1 (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,167   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.2.0-cp37-cp37m-linux_armv7l.whl#sha256=ccd711cccc31d4e49f3d8d88cc5459d7c6c496890a1e651df48a024e1a9675ae (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,168   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.2.0-cp37-cp37m-linux_armv6l.whl#sha256=ccd711cccc31d4e49f3d8d88cc5459d7c6c496890a1e651df48a024e1a9675ae (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,168   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.1.2-cp39-cp39-linux_armv7l.whl#sha256=4d8967854ad1577550cea92b6474561726648c605f63ab598218f7ee1c21b1ee (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,169   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.1.2-cp39-cp39-linux_armv6l.whl#sha256=4d8967854ad1577550cea92b6474561726648c605f63ab598218f7ee1c21b1ee (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,170   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.1.2-cp37-cp37m-linux_armv7l.whl#sha256=09ed6e7a446e5f1d34b68e7af188265e09b6bd4d51dc84c7d0d190a08966fb79 (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,171   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.1.2-cp37-cp37m-linux_armv6l.whl#sha256=09ed6e7a446e5f1d34b68e7af188265e09b6bd4d51dc84c7d0d190a08966fb79 (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,171   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.1.2-cp35-cp35m-linux_armv7l.whl#sha256=c2780f924bfbbbf78b23f481945f17f1232cf043138502c8a7242dd9c04310ba (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,171   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.1.2-cp35-cp35m-linux_armv6l.whl#sha256=c2780f924bfbbbf78b23f481945f17f1232cf043138502c8a7242dd9c04310ba (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,172   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.2-cp39-cp39-linux_armv7l.whl#sha256=d547df152ca5cc919761e6a071515f4e97830ffae817158ec9fa1399382d1761 (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,172   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.2-cp39-cp39-linux_armv6l.whl#sha256=d547df152ca5cc919761e6a071515f4e97830ffae817158ec9fa1399382d1761 (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,173   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.2-cp37-cp37m-linux_armv7l.whl#sha256=f26a2514fd959f03f692bd823ce87ed95de9f2769ddb5386a39afb945d7c7b17 (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,173   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.2-cp37-cp37m-linux_armv6l.whl#sha256=f26a2514fd959f03f692bd823ce87ed95de9f2769ddb5386a39afb945d7c7b17 (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,174   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.2-cp35-cp35m-linux_armv7l.whl#sha256=c74109d24a39f8eddaffb0933304aefa113c6828a6955ab5db29715f91ea8611 (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,174   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.2-cp35-cp35m-linux_armv6l.whl#sha256=c74109d24a39f8eddaffb0933304aefa113c6828a6955ab5db29715f91ea8611 (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,175   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.1-cp39-cp39-linux_armv7l.whl#sha256=e96b8376cebbb6f9a9b49d8d88a027e58f790aada95f37814c7cf8fab8f7a606 (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,176   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.1-cp39-cp39-linux_armv6l.whl#sha256=e96b8376cebbb6f9a9b49d8d88a027e58f790aada95f37814c7cf8fab8f7a606 (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,176   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.1-cp37-cp37m-linux_armv7l.whl#sha256=5917ef47b38ba9bd489d8299f12812ea7a17d8f10783e0fe4c4f184a2bae3018 (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,177   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.1-cp37-cp37m-linux_armv6l.whl#sha256=5917ef47b38ba9bd489d8299f12812ea7a17d8f10783e0fe4c4f184a2bae3018 (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,177   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.1-cp35-cp35m-linux_armv7l.whl#sha256=261b20a637cc9b006dcb9866174c2d3c4cfa0f0375bd1aa38950c8ccd867dcdd (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,178   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-2.0.1-cp35-cp35m-linux_armv6l.whl#sha256=261b20a637cc9b006dcb9866174c2d3c4cfa0f0375bd1aa38950c8ccd867dcdd (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,179   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-1.1-py2.py3-none-any.whl#sha256=a13ed8456dad061d5c5f05609847f58aa713a49993e7923dceadb036dfb92f54 (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,179   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-1.0-py2.py3-none-any.whl#sha256=d5f6c5bad4475c9a6820816e07d9c2bea6ee364c9f45ea6214cc55e18513e381 (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,179   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-0.20-py3-none-any.whl#sha256=fe868f38af84d0ed687e6344436930f427f9d154975e10cac9d5ff634a40d16a (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,180   Skipping link: No binaries permitted for forgi: https://www.piwheels.org/simple/forgi/forgi-0.1-py3-none-any.whl#sha256=74cf37eb8412b8c4a6cc74b32257f5257d71148ad9051c4d9227b689036c1adf (from https://www.piwheels.org/simple/forgi/)
2023-09-11T06:53:53,180 Skipping link: not a file: https://www.piwheels.org/simple/forgi/
2023-09-11T06:53:53,181 Skipping link: not a file: https://pypi.org/simple/forgi/
2023-09-11T06:53:53,203 Given no hashes to check 1 links for project 'forgi': discarding no candidates
2023-09-11T06:53:53,221 Collecting forgi==2.0.2
2023-09-11T06:53:53,224   Created temporary directory: /tmp/pip-unpack-q8b9ifso
2023-09-11T06:53:53,514   Downloading forgi-2.0.2.tar.gz (26.6 MB)
2023-09-11T06:54:03,135   Added forgi==2.0.2 from https://files.pythonhosted.org/packages/ea/95/2fdfc3636ce7957d2581ef9813cd49af123afd718c4bcb41486dadd5babc/forgi-2.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-vraus2lt'
2023-09-11T06:54:03,137   Running setup.py (path:/tmp/pip-wheel-6qati27u/forgi_0373f3763657443da9698165829f0eff/setup.py) egg_info for package forgi
2023-09-11T06:54:03,138   Created temporary directory: /tmp/pip-pip-egg-info-p_fqib5k
2023-09-11T06:54:03,139   Preparing metadata (setup.py): started
2023-09-11T06:54:03,140   Running command python setup.py egg_info
2023-09-11T06:54:03,747   fatal: not a git repository (or any of the parent directories): .git
2023-09-11T06:54:04,202   INFO:root:running egg_info
2023-09-11T06:54:04,204   INFO:root:creating /tmp/pip-pip-egg-info-p_fqib5k/forgi.egg-info
2023-09-11T06:54:04,228   INFO:root:writing /tmp/pip-pip-egg-info-p_fqib5k/forgi.egg-info/PKG-INFO
2023-09-11T06:54:04,234   INFO:root:writing dependency_links to /tmp/pip-pip-egg-info-p_fqib5k/forgi.egg-info/dependency_links.txt
2023-09-11T06:54:04,238   INFO:root:writing requirements to /tmp/pip-pip-egg-info-p_fqib5k/forgi.egg-info/requires.txt
2023-09-11T06:54:04,239   INFO:root:writing top-level names to /tmp/pip-pip-egg-info-p_fqib5k/forgi.egg-info/top_level.txt
2023-09-11T06:54:04,241   INFO:root:writing manifest file '/tmp/pip-pip-egg-info-p_fqib5k/forgi.egg-info/SOURCES.txt'
2023-09-11T06:54:04,330   INFO:root:reading manifest file '/tmp/pip-pip-egg-info-p_fqib5k/forgi.egg-info/SOURCES.txt'
2023-09-11T06:54:04,332   INFO:root:adding license file 'LICENSE'
2023-09-11T06:54:04,332   INFO:root:adding license file 'CREDITS'
2023-09-11T06:54:04,336   INFO:root:writing manifest file '/tmp/pip-pip-egg-info-p_fqib5k/forgi.egg-info/SOURCES.txt'
2023-09-11T06:54:04,444   Preparing metadata (setup.py): finished with status 'done'
2023-09-11T06:54:04,448   Source in /tmp/pip-wheel-6qati27u/forgi_0373f3763657443da9698165829f0eff has version 2.0.2, which satisfies requirement forgi==2.0.2 from https://files.pythonhosted.org/packages/ea/95/2fdfc3636ce7957d2581ef9813cd49af123afd718c4bcb41486dadd5babc/forgi-2.0.2.tar.gz
2023-09-11T06:54:04,449   Removed forgi==2.0.2 from https://files.pythonhosted.org/packages/ea/95/2fdfc3636ce7957d2581ef9813cd49af123afd718c4bcb41486dadd5babc/forgi-2.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-vraus2lt'
2023-09-11T06:54:04,453 Created temporary directory: /tmp/pip-unpack-la0cs7d5
2023-09-11T06:54:04,454 Created temporary directory: /tmp/pip-unpack-mvg55tm0
2023-09-11T06:54:04,490 Building wheels for collected packages: forgi
2023-09-11T06:54:04,494   Created temporary directory: /tmp/pip-wheel-m32frlel
2023-09-11T06:54:04,495   Building wheel for forgi (setup.py): started
2023-09-11T06:54:04,496   Destination directory: /tmp/pip-wheel-m32frlel
2023-09-11T06:54:04,496   Running command python setup.py bdist_wheel
2023-09-11T06:54:05,061   fatal: not a git repository (or any of the parent directories): .git
2023-09-11T06:54:05,502   INFO:root:running bdist_wheel
2023-09-11T06:54:05,571   INFO:root:running build
2023-09-11T06:54:05,572   INFO:root:running build_py
2023-09-11T06:54:05,573   INFO:root:creating build
2023-09-11T06:54:05,574   INFO:root:creating build/lib
2023-09-11T06:54:05,574   INFO:root:creating build/lib/forgi
2023-09-11T06:54:05,576   INFO:root:copying forgi/whitelist.py -> build/lib/forgi
2023-09-11T06:54:05,577   INFO:root:copying forgi/config.py -> build/lib/forgi
2023-09-11T06:54:05,579   INFO:root:copying forgi/__init__.py -> build/lib/forgi
2023-09-11T06:54:05,581   INFO:root:creating build/lib/forgi/graph
2023-09-11T06:54:05,582   INFO:root:copying forgi/graph/sequence.py -> build/lib/forgi/graph
2023-09-11T06:54:05,585   INFO:root:copying forgi/graph/transform_graphs.py -> build/lib/forgi/graph
2023-09-11T06:54:05,587   INFO:root:copying forgi/graph/_graph_construction.py -> build/lib/forgi/graph
2023-09-11T06:54:05,590   INFO:root:copying forgi/graph/residue.py -> build/lib/forgi/graph
2023-09-11T06:54:05,591   INFO:root:copying forgi/graph/_basegraph.py -> build/lib/forgi/graph
2023-09-11T06:54:05,593   INFO:root:copying forgi/graph/__init__.py -> build/lib/forgi/graph
2023-09-11T06:54:05,595   INFO:root:copying forgi/graph/_cofold.py -> build/lib/forgi/graph
2023-09-11T06:54:05,597   INFO:root:copying forgi/graph/bulge_graph.py -> build/lib/forgi/graph
2023-09-11T06:54:05,601   INFO:root:creating build/lib/forgi/threedee
2023-09-11T06:54:05,602   INFO:root:copying forgi/threedee/__init__.py -> build/lib/forgi/threedee
2023-09-11T06:54:05,604   INFO:root:creating build/lib/forgi/threedee/model
2023-09-11T06:54:05,605   INFO:root:copying forgi/threedee/model/linecloud.py -> build/lib/forgi/threedee/model
2023-09-11T06:54:05,607   INFO:root:copying forgi/threedee/model/_ensemble2.py -> build/lib/forgi/threedee/model
2023-09-11T06:54:05,610   INFO:root:copying forgi/threedee/model/transform_cg.py -> build/lib/forgi/threedee/model
2023-09-11T06:54:05,612   INFO:root:copying forgi/threedee/model/descriptors.py -> build/lib/forgi/threedee/model
2023-09-11T06:54:05,613   INFO:root:copying forgi/threedee/model/_ensemble.py -> build/lib/forgi/threedee/model
2023-09-11T06:54:05,616   INFO:root:copying forgi/threedee/model/similarity.py -> build/lib/forgi/threedee/model
2023-09-11T06:54:05,618   INFO:root:copying forgi/threedee/model/__init__.py -> build/lib/forgi/threedee/model
2023-09-11T06:54:05,620   INFO:root:copying forgi/threedee/model/stats.py -> build/lib/forgi/threedee/model
2023-09-11T06:54:05,622   INFO:root:copying forgi/threedee/model/coarse_grain.py -> build/lib/forgi/threedee/model
2023-09-11T06:54:05,626   INFO:root:creating build/lib/forgi/utilities
2023-09-11T06:54:05,627   INFO:root:copying forgi/utilities/debug.py -> build/lib/forgi/utilities
2023-09-11T06:54:05,629   INFO:root:copying forgi/utilities/observedDict.py -> build/lib/forgi/utilities
2023-09-11T06:54:05,631   INFO:root:copying forgi/utilities/stuff.py -> build/lib/forgi/utilities
2023-09-11T06:54:05,633   INFO:root:copying forgi/utilities/graph.py -> build/lib/forgi/utilities
2023-09-11T06:54:05,635   INFO:root:copying forgi/utilities/__init__.py -> build/lib/forgi/utilities
2023-09-11T06:54:05,636   INFO:root:copying forgi/utilities/commandline_utils.py -> build/lib/forgi/utilities
2023-09-11T06:54:05,638   INFO:root:copying forgi/utilities/exceptions.py -> build/lib/forgi/utilities
2023-09-11T06:54:05,640   INFO:root:copying forgi/utilities/numbered_dotbracket.py -> build/lib/forgi/utilities
2023-09-11T06:54:05,643   INFO:root:creating build/lib/forgi/threedee/utilities
2023-09-11T06:54:05,643   INFO:root:copying forgi/threedee/utilities/_dssr.py -> build/lib/forgi/threedee/utilities
2023-09-11T06:54:05,646   INFO:root:copying forgi/threedee/utilities/average_stem_vres_atom_positions.py -> build/lib/forgi/threedee/utilities
2023-09-11T06:54:05,648   INFO:root:copying forgi/threedee/utilities/virtual_residues.py -> build/lib/forgi/threedee/utilities
2023-09-11T06:54:05,649   INFO:root:copying forgi/threedee/utilities/vector.py -> build/lib/forgi/threedee/utilities
2023-09-11T06:54:05,652   INFO:root:copying forgi/threedee/utilities/my_math.py -> build/lib/forgi/threedee/utilities
2023-09-11T06:54:05,654   INFO:root:copying forgi/threedee/utilities/mcannotate.py -> build/lib/forgi/threedee/utilities
2023-09-11T06:54:05,656   INFO:root:copying forgi/threedee/utilities/graph_pdb.py -> build/lib/forgi/threedee/utilities
2023-09-11T06:54:05,659   INFO:root:copying forgi/threedee/utilities/modified_res_lookup.py -> build/lib/forgi/threedee/utilities
2023-09-11T06:54:05,662   INFO:root:copying forgi/threedee/utilities/modified_res.py -> build/lib/forgi/threedee/utilities
2023-09-11T06:54:05,664   INFO:root:copying forgi/threedee/utilities/__init__.py -> build/lib/forgi/threedee/utilities
2023-09-11T06:54:05,666   INFO:root:copying forgi/threedee/utilities/cytvec_setup.py -> build/lib/forgi/threedee/utilities
2023-09-11T06:54:05,667   INFO:root:copying forgi/threedee/utilities/pdb.py -> build/lib/forgi/threedee/utilities
2023-09-11T06:54:05,671   INFO:root:creating build/lib/forgi/threedee/classification
2023-09-11T06:54:05,671   INFO:root:copying forgi/threedee/classification/aminor.py -> build/lib/forgi/threedee/classification
2023-09-11T06:54:05,674   INFO:root:copying forgi/threedee/classification/__init__.py -> build/lib/forgi/threedee/classification
2023-09-11T06:54:05,676   INFO:root:creating build/lib/forgi/threedee/classification/_training
2023-09-11T06:54:05,677   INFO:root:copying forgi/threedee/classification/_training/aminor_training.py -> build/lib/forgi/threedee/classification/_training
2023-09-11T06:54:05,680   INFO:root:copying forgi/threedee/classification/_training/train_aminor.py -> build/lib/forgi/threedee/classification/_training
2023-09-11T06:54:05,681   INFO:root:copying forgi/threedee/classification/_training/__init__.py -> build/lib/forgi/threedee/classification/_training
2023-09-11T06:54:05,683   INFO:root:copying forgi/threedee/classification/_training/_parse_utils.py -> build/lib/forgi/threedee/classification/_training
2023-09-11T06:54:05,685   INFO:root:creating build/lib/forgi/_k2n_standalone
2023-09-11T06:54:05,686   INFO:root:copying forgi/_k2n_standalone/output.py -> build/lib/forgi/_k2n_standalone
2023-09-11T06:54:05,688   INFO:root:copying forgi/_k2n_standalone/bpseq.py -> build/lib/forgi/_k2n_standalone
2023-09-11T06:54:05,690   INFO:root:copying forgi/_k2n_standalone/__init__.py -> build/lib/forgi/_k2n_standalone
2023-09-11T06:54:05,692   INFO:root:copying forgi/_k2n_standalone/dict2d.py -> build/lib/forgi/_k2n_standalone
2023-09-11T06:54:05,694   INFO:root:copying forgi/_k2n_standalone/ct_simple.py -> build/lib/forgi/_k2n_standalone
2023-09-11T06:54:05,696   INFO:root:copying forgi/_k2n_standalone/rna2d.py -> build/lib/forgi/_k2n_standalone
2023-09-11T06:54:05,699   INFO:root:copying forgi/_k2n_standalone/knots.py -> build/lib/forgi/_k2n_standalone
2023-09-11T06:54:05,702   INFO:root:copying forgi/_k2n_standalone/knotted2nested.py -> build/lib/forgi/_k2n_standalone
2023-09-11T06:54:05,705   INFO:root:creating build/lib/forgi/threedee/visual
2023-09-11T06:54:05,706   INFO:root:copying forgi/threedee/visual/__init__.py -> build/lib/forgi/threedee/visual
2023-09-11T06:54:05,707   INFO:root:copying forgi/threedee/visual/pymol.py -> build/lib/forgi/threedee/visual
2023-09-11T06:54:05,710   INFO:root:creating build/lib/forgi/visual
2023-09-11T06:54:05,711   INFO:root:copying forgi/visual/fornac.py -> build/lib/forgi/visual
2023-09-11T06:54:05,713   INFO:root:copying forgi/visual/mplotlib.py -> build/lib/forgi/visual
2023-09-11T06:54:05,715   INFO:root:copying forgi/visual/__init__.py -> build/lib/forgi/visual
2023-09-11T06:54:05,717   INFO:root:creating build/lib/forgi/projection
2023-09-11T06:54:05,718   INFO:root:copying forgi/projection/hausdorff.py -> build/lib/forgi/projection
2023-09-11T06:54:05,720   INFO:root:copying forgi/projection/projection2d.py -> build/lib/forgi/projection
2023-09-11T06:54:05,723   INFO:root:copying forgi/projection/__init__.py -> build/lib/forgi/projection
2023-09-11T06:54:05,728   INFO:root:creating build/lib/forgi/threedee/data
2023-09-11T06:54:05,729   INFO:root:copying forgi/threedee/data/ideal_1_4_5_8.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,732   INFO:root:copying forgi/threedee/data/ideal_1_40_41_80.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,737   INFO:root:copying forgi/threedee/data/ideal_1_25_26_50.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,741   INFO:root:copying forgi/threedee/data/ideal_1_3_4_6.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,743   INFO:root:copying forgi/threedee/data/ideal_1_30_31_60.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,747   INFO:root:copying forgi/threedee/data/ideal_1_8_9_16.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,750   INFO:root:copying forgi/threedee/data/ideal_1_32_33_64.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,754   INFO:root:copying forgi/threedee/data/ideal_1_20_21_40.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,757   INFO:root:copying forgi/threedee/data/ideal_1_33_34_66.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,761   INFO:root:copying forgi/threedee/data/ideal_1_36_37_72.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,765   INFO:root:copying forgi/threedee/data/ideal_1_2_3_4.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,768   INFO:root:copying forgi/threedee/data/ideal_1_35_36_70.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,772   INFO:root:copying forgi/threedee/data/ideal_1_19_20_38.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,775   INFO:root:copying forgi/threedee/data/ideal_1_18_19_36.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,778   INFO:root:copying forgi/threedee/data/ideal_1_11_12_22.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,781   INFO:root:copying forgi/threedee/data/ideal_1_5_6_10.pdb -> build/lib/forgi/threedee/data
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2023-09-11T06:54:05,787   INFO:root:copying forgi/threedee/data/ideal_1_10_11_20.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,790   INFO:root:copying forgi/threedee/data/ideal_1_17_18_34.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,793   INFO:root:copying forgi/threedee/data/ideal_1_15_16_30.pdb -> build/lib/forgi/threedee/data
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2023-09-11T06:54:05,800   INFO:root:copying forgi/threedee/data/ideal_1_12_13_24.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,803   INFO:root:copying forgi/threedee/data/ideal_1_9_10_18.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,806   INFO:root:copying forgi/threedee/data/ideal_1_24_25_48.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,810   INFO:root:copying forgi/threedee/data/ideal_1_31_32_62.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,815   INFO:root:copying forgi/threedee/data/ideal_1_21_22_42.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,818   INFO:root:copying forgi/threedee/data/ideal_1_22_23_44.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,821   INFO:root:copying forgi/threedee/data/ideal_1_16_17_32.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,824   INFO:root:copying forgi/threedee/data/ideal_1_14_15_28.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,827   INFO:root:copying forgi/threedee/data/ideal_1_28_29_56.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,831   INFO:root:copying forgi/threedee/data/ideal_1_34_35_68.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,835   INFO:root:copying forgi/threedee/data/ideal_1_39_40_78.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,840   INFO:root:copying forgi/threedee/data/ideal_1_1_2_2.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,842   INFO:root:copying forgi/threedee/data/ideal_1_7_8_14.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,844   INFO:root:copying forgi/threedee/data/ideal_1_6_7_12.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,847   INFO:root:copying forgi/threedee/data/ideal_1_13_14_26.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,850   INFO:root:copying forgi/threedee/data/ideal_1_38_39_76.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,855   INFO:root:copying forgi/threedee/data/ideal_1_23_24_46.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,859   INFO:root:copying forgi/threedee/data/ideal_1_37_38_74.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,865   INFO:root:copying forgi/threedee/data/ideal_1_26_27_52.pdb -> build/lib/forgi/threedee/data
2023-09-11T06:54:05,869   INFO:root:copying forgi/threedee/data/average_atom_positions.json -> build/lib/forgi/threedee/data
2023-09-11T06:54:07,803   INFO:root:copying forgi/threedee/data/aminor_geometries.csv -> build/lib/forgi/threedee/data
2023-09-11T06:54:08,190   INFO:root:copying forgi/threedee/data/aminor_params.json -> build/lib/forgi/threedee/data
2023-09-11T06:54:08,197   INFO:root:running build_scripts
2023-09-11T06:54:08,198   INFO:root:creating build/scripts-3.11
2023-09-11T06:54:08,199   INFO:root:copying and adjusting examples/rnaConvert.py -> build/scripts-3.11
2023-09-11T06:54:08,202   INFO:root:copying and adjusting examples/describe_cg.py -> build/scripts-3.11
2023-09-11T06:54:08,204   INFO:root:copying and adjusting examples/compare_RNA.py -> build/scripts-3.11
2023-09-11T06:54:08,206   INFO:root:copying and adjusting examples/visualize_rna.py -> build/scripts-3.11
2023-09-11T06:54:08,208   INFO:root:copying and adjusting examples/pseudoknot_analyzer.py -> build/scripts-3.11
2023-09-11T06:54:08,212   INFO:root:copying and adjusting examples/forgi_config.py -> build/scripts-3.11
2023-09-11T06:54:08,213   INFO:root:changing mode of build/scripts-3.11/rnaConvert.py from 644 to 755
2023-09-11T06:54:08,214   INFO:root:changing mode of build/scripts-3.11/describe_cg.py from 644 to 755
2023-09-11T06:54:08,215   INFO:root:changing mode of build/scripts-3.11/compare_RNA.py from 644 to 755
2023-09-11T06:54:08,215   INFO:root:changing mode of build/scripts-3.11/visualize_rna.py from 644 to 755
2023-09-11T06:54:08,216   INFO:root:changing mode of build/scripts-3.11/pseudoknot_analyzer.py from 644 to 755
2023-09-11T06:54:08,217   INFO:root:changing mode of build/scripts-3.11/forgi_config.py from 644 to 755
2023-09-11T06:54:08,241   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-09-11T06:54:08,242   !!

2023-09-11T06:54:08,243           ********************************************************************************
2023-09-11T06:54:08,244           Please avoid running ``setup.py`` directly.
2023-09-11T06:54:08,244           Instead, use pypa/build, pypa/installer or other
2023-09-11T06:54:08,245           standards-based tools.

2023-09-11T06:54:08,246           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-09-11T06:54:08,247           ********************************************************************************

2023-09-11T06:54:08,248   !!
2023-09-11T06:54:08,249     self.initialize_options()
2023-09-11T06:54:08,270   INFO:wheel:installing to build/bdist.linux-armv7l/wheel
2023-09-11T06:54:08,270   INFO:root:running install
2023-09-11T06:54:08,295   INFO:root:running install_lib
2023-09-11T06:54:08,319   INFO:root:creating build/bdist.linux-armv7l
2023-09-11T06:54:08,320   INFO:root:creating build/bdist.linux-armv7l/wheel
2023-09-11T06:54:08,322   INFO:root:creating build/bdist.linux-armv7l/wheel/forgi
2023-09-11T06:54:08,323   INFO:root:copying build/lib/forgi/whitelist.py -> build/bdist.linux-armv7l/wheel/forgi
2023-09-11T06:54:08,325   INFO:root:creating build/bdist.linux-armv7l/wheel/forgi/visual
2023-09-11T06:54:08,326   INFO:root:copying build/lib/forgi/visual/fornac.py -> build/bdist.linux-armv7l/wheel/forgi/visual
2023-09-11T06:54:08,329   INFO:root:copying build/lib/forgi/visual/mplotlib.py -> build/bdist.linux-armv7l/wheel/forgi/visual
2023-09-11T06:54:08,332   INFO:root:copying build/lib/forgi/visual/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/visual
2023-09-11T06:54:08,333   INFO:root:copying build/lib/forgi/config.py -> build/bdist.linux-armv7l/wheel/forgi
2023-09-11T06:54:08,336   INFO:root:creating build/bdist.linux-armv7l/wheel/forgi/graph
2023-09-11T06:54:08,337   INFO:root:copying build/lib/forgi/graph/sequence.py -> build/bdist.linux-armv7l/wheel/forgi/graph
2023-09-11T06:54:08,340   INFO:root:copying build/lib/forgi/graph/transform_graphs.py -> build/bdist.linux-armv7l/wheel/forgi/graph
2023-09-11T06:54:08,342   INFO:root:copying build/lib/forgi/graph/_graph_construction.py -> build/bdist.linux-armv7l/wheel/forgi/graph
2023-09-11T06:54:08,345   INFO:root:copying build/lib/forgi/graph/residue.py -> build/bdist.linux-armv7l/wheel/forgi/graph
2023-09-11T06:54:08,347   INFO:root:copying build/lib/forgi/graph/_basegraph.py -> build/bdist.linux-armv7l/wheel/forgi/graph
2023-09-11T06:54:08,349   INFO:root:copying build/lib/forgi/graph/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/graph
2023-09-11T06:54:08,350   INFO:root:copying build/lib/forgi/graph/_cofold.py -> build/bdist.linux-armv7l/wheel/forgi/graph
2023-09-11T06:54:08,352   INFO:root:copying build/lib/forgi/graph/bulge_graph.py -> build/bdist.linux-armv7l/wheel/forgi/graph
2023-09-11T06:54:08,357   INFO:root:copying build/lib/forgi/__init__.py -> build/bdist.linux-armv7l/wheel/forgi
2023-09-11T06:54:08,359   INFO:root:creating build/bdist.linux-armv7l/wheel/forgi/projection
2023-09-11T06:54:08,360   INFO:root:copying build/lib/forgi/projection/hausdorff.py -> build/bdist.linux-armv7l/wheel/forgi/projection
2023-09-11T06:54:08,363   INFO:root:copying build/lib/forgi/projection/projection2d.py -> build/bdist.linux-armv7l/wheel/forgi/projection
2023-09-11T06:54:08,366   INFO:root:copying build/lib/forgi/projection/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/projection
2023-09-11T06:54:08,368   INFO:root:creating build/bdist.linux-armv7l/wheel/forgi/_k2n_standalone
2023-09-11T06:54:08,370   INFO:root:copying build/lib/forgi/_k2n_standalone/output.py -> build/bdist.linux-armv7l/wheel/forgi/_k2n_standalone
2023-09-11T06:54:08,372   INFO:root:copying build/lib/forgi/_k2n_standalone/bpseq.py -> build/bdist.linux-armv7l/wheel/forgi/_k2n_standalone
2023-09-11T06:54:08,374   INFO:root:copying build/lib/forgi/_k2n_standalone/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/_k2n_standalone
2023-09-11T06:54:08,376   INFO:root:copying build/lib/forgi/_k2n_standalone/dict2d.py -> build/bdist.linux-armv7l/wheel/forgi/_k2n_standalone
2023-09-11T06:54:08,379   INFO:root:copying build/lib/forgi/_k2n_standalone/ct_simple.py -> build/bdist.linux-armv7l/wheel/forgi/_k2n_standalone
2023-09-11T06:54:08,381   INFO:root:copying build/lib/forgi/_k2n_standalone/rna2d.py -> build/bdist.linux-armv7l/wheel/forgi/_k2n_standalone
2023-09-11T06:54:08,384   INFO:root:copying build/lib/forgi/_k2n_standalone/knots.py -> build/bdist.linux-armv7l/wheel/forgi/_k2n_standalone
2023-09-11T06:54:08,388   INFO:root:copying build/lib/forgi/_k2n_standalone/knotted2nested.py -> build/bdist.linux-armv7l/wheel/forgi/_k2n_standalone
2023-09-11T06:54:08,391   INFO:root:creating build/bdist.linux-armv7l/wheel/forgi/threedee
2023-09-11T06:54:08,392   INFO:root:creating build/bdist.linux-armv7l/wheel/forgi/threedee/model
2023-09-11T06:54:08,393   INFO:root:copying build/lib/forgi/threedee/model/linecloud.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/model
2023-09-11T06:54:08,395   INFO:root:copying build/lib/forgi/threedee/model/_ensemble2.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/model
2023-09-11T06:54:08,398   INFO:root:copying build/lib/forgi/threedee/model/transform_cg.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/model
2023-09-11T06:54:08,400   INFO:root:copying build/lib/forgi/threedee/model/descriptors.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/model
2023-09-11T06:54:08,402   INFO:root:copying build/lib/forgi/threedee/model/_ensemble.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/model
2023-09-11T06:54:08,404   INFO:root:copying build/lib/forgi/threedee/model/similarity.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/model
2023-09-11T06:54:08,407   INFO:root:copying build/lib/forgi/threedee/model/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/model
2023-09-11T06:54:08,408   INFO:root:copying build/lib/forgi/threedee/model/stats.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/model
2023-09-11T06:54:08,411   INFO:root:copying build/lib/forgi/threedee/model/coarse_grain.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/model
2023-09-11T06:54:08,415   INFO:root:creating build/bdist.linux-armv7l/wheel/forgi/threedee/visual
2023-09-11T06:54:08,416   INFO:root:copying build/lib/forgi/threedee/visual/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/visual
2023-09-11T06:54:08,418   INFO:root:copying build/lib/forgi/threedee/visual/pymol.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/visual
2023-09-11T06:54:08,421   INFO:root:creating build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,422   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_4_5_8.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,424   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_40_41_80.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,429   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_25_26_50.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,436   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_3_4_6.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,438   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_30_31_60.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,442   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_8_9_16.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,445   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_32_33_64.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,450   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_20_21_40.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,453   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_33_34_66.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,458   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_36_37_72.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,463   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_2_3_4.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,465   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_35_36_70.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,470   INFO:root:copying build/lib/forgi/threedee/data/aminor_params.json -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,472   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_19_20_38.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,475   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_18_19_36.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,478   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_11_12_22.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,481   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_5_6_10.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,483   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_27_28_54.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,487   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_10_11_20.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,490   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_17_18_34.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,493   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_15_16_30.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,496   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_29_30_58.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,500   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_12_13_24.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,502   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_9_10_18.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,505   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_24_25_48.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,509   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_31_32_62.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,513   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_21_22_42.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,516   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_22_23_44.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,519   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_16_17_32.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:08,523   INFO:root:copying build/lib/forgi/threedee/data/aminor_geometries.csv -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:09,120   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_14_15_28.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:09,124   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_28_29_56.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:09,127   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_34_35_68.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:09,132   INFO:root:copying build/lib/forgi/threedee/data/average_atom_positions.json -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:10,027   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_39_40_78.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:10,032   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_1_2_2.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:10,033   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_7_8_14.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:10,036   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_6_7_12.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:10,039   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_13_14_26.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:10,042   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_38_39_76.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:10,046   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_23_24_46.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:10,050   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_37_38_74.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:10,054   INFO:root:copying build/lib/forgi/threedee/data/ideal_1_26_27_52.pdb -> build/bdist.linux-armv7l/wheel/forgi/threedee/data
2023-09-11T06:54:10,058   INFO:root:creating build/bdist.linux-armv7l/wheel/forgi/threedee/classification
2023-09-11T06:54:10,059   INFO:root:copying build/lib/forgi/threedee/classification/aminor.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/classification
2023-09-11T06:54:10,062   INFO:root:creating build/bdist.linux-armv7l/wheel/forgi/threedee/classification/_training
2023-09-11T06:54:10,062   INFO:root:copying build/lib/forgi/threedee/classification/_training/aminor_training.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/classification/_training
2023-09-11T06:54:10,065   INFO:root:copying build/lib/forgi/threedee/classification/_training/train_aminor.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/classification/_training
2023-09-11T06:54:10,067   INFO:root:copying build/lib/forgi/threedee/classification/_training/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/classification/_training
2023-09-11T06:54:10,068   INFO:root:copying build/lib/forgi/threedee/classification/_training/_parse_utils.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/classification/_training
2023-09-11T06:54:10,071   INFO:root:copying build/lib/forgi/threedee/classification/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/classification
2023-09-11T06:54:10,072   INFO:root:copying build/lib/forgi/threedee/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/threedee
2023-09-11T06:54:10,075   INFO:root:creating build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2023-09-11T06:54:10,075   INFO:root:copying build/lib/forgi/threedee/utilities/_dssr.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2023-09-11T06:54:10,078   INFO:root:copying build/lib/forgi/threedee/utilities/average_stem_vres_atom_positions.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2023-09-11T06:54:10,080   INFO:root:copying build/lib/forgi/threedee/utilities/virtual_residues.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2023-09-11T06:54:10,082   INFO:root:copying build/lib/forgi/threedee/utilities/vector.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2023-09-11T06:54:10,085   INFO:root:copying build/lib/forgi/threedee/utilities/my_math.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2023-09-11T06:54:10,086   INFO:root:copying build/lib/forgi/threedee/utilities/mcannotate.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2023-09-11T06:54:10,089   INFO:root:copying build/lib/forgi/threedee/utilities/graph_pdb.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2023-09-11T06:54:10,092   INFO:root:copying build/lib/forgi/threedee/utilities/modified_res_lookup.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2023-09-11T06:54:10,096   INFO:root:copying build/lib/forgi/threedee/utilities/modified_res.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2023-09-11T06:54:10,098   INFO:root:copying build/lib/forgi/threedee/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2023-09-11T06:54:10,099   INFO:root:copying build/lib/forgi/threedee/utilities/cytvec_setup.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2023-09-11T06:54:10,101   INFO:root:copying build/lib/forgi/threedee/utilities/pdb.py -> build/bdist.linux-armv7l/wheel/forgi/threedee/utilities
2023-09-11T06:54:10,104   INFO:root:creating build/bdist.linux-armv7l/wheel/forgi/utilities
2023-09-11T06:54:10,105   INFO:root:copying build/lib/forgi/utilities/debug.py -> build/bdist.linux-armv7l/wheel/forgi/utilities
2023-09-11T06:54:10,107   INFO:root:copying build/lib/forgi/utilities/observedDict.py -> build/bdist.linux-armv7l/wheel/forgi/utilities
2023-09-11T06:54:10,109   INFO:root:copying build/lib/forgi/utilities/stuff.py -> build/bdist.linux-armv7l/wheel/forgi/utilities
2023-09-11T06:54:10,111   INFO:root:copying build/lib/forgi/utilities/graph.py -> build/bdist.linux-armv7l/wheel/forgi/utilities
2023-09-11T06:54:10,113   INFO:root:copying build/lib/forgi/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/forgi/utilities
2023-09-11T06:54:10,114   INFO:root:copying build/lib/forgi/utilities/commandline_utils.py -> build/bdist.linux-armv7l/wheel/forgi/utilities
2023-09-11T06:54:10,117   INFO:root:copying build/lib/forgi/utilities/exceptions.py -> build/bdist.linux-armv7l/wheel/forgi/utilities
2023-09-11T06:54:10,118   INFO:root:copying build/lib/forgi/utilities/numbered_dotbracket.py -> build/bdist.linux-armv7l/wheel/forgi/utilities
2023-09-11T06:54:10,120   INFO:root:running install_data
2023-09-11T06:54:10,145   INFO:root:creating build/bdist.linux-armv7l/wheel/forgi-2.0.2.data
2023-09-11T06:54:10,146   INFO:root:creating build/bdist.linux-armv7l/wheel/forgi-2.0.2.data/data
2023-09-11T06:54:10,146   INFO:root:copying CREDITS -> build/bdist.linux-armv7l/wheel/forgi-2.0.2.data/data/
2023-09-11T06:54:10,148   INFO:root:copying LICENSE -> build/bdist.linux-armv7l/wheel/forgi-2.0.2.data/data/
2023-09-11T06:54:10,151   INFO:root:running install_egg_info
2023-09-11T06:54:10,211   INFO:root:running egg_info
2023-09-11T06:54:10,236   INFO:root:writing forgi.egg-info/PKG-INFO
2023-09-11T06:54:10,242   INFO:root:writing dependency_links to forgi.egg-info/dependency_links.txt
2023-09-11T06:54:10,246   INFO:root:writing requirements to forgi.egg-info/requires.txt
2023-09-11T06:54:10,247   INFO:root:writing top-level names to forgi.egg-info/top_level.txt
2023-09-11T06:54:10,290   INFO:root:reading manifest file 'forgi.egg-info/SOURCES.txt'
2023-09-11T06:54:10,294   INFO:root:adding license file 'LICENSE'
2023-09-11T06:54:10,295   INFO:root:adding license file 'CREDITS'
2023-09-11T06:54:10,300   INFO:root:writing manifest file 'forgi.egg-info/SOURCES.txt'
2023-09-11T06:54:10,302   INFO:root:Copying forgi.egg-info to build/bdist.linux-armv7l/wheel/forgi-2.0.2-py3.11.egg-info
2023-09-11T06:54:10,312   INFO:root:running install_scripts
2023-09-11T06:54:10,313   INFO:root:creating build/bdist.linux-armv7l/wheel/forgi-2.0.2.data/scripts
2023-09-11T06:54:10,314   INFO:root:copying build/scripts-3.11/forgi_config.py -> build/bdist.linux-armv7l/wheel/forgi-2.0.2.data/scripts
2023-09-11T06:54:10,316   INFO:root:copying build/scripts-3.11/describe_cg.py -> build/bdist.linux-armv7l/wheel/forgi-2.0.2.data/scripts
2023-09-11T06:54:10,318   INFO:root:copying build/scripts-3.11/compare_RNA.py -> build/bdist.linux-armv7l/wheel/forgi-2.0.2.data/scripts
2023-09-11T06:54:10,320   INFO:root:copying build/scripts-3.11/visualize_rna.py -> build/bdist.linux-armv7l/wheel/forgi-2.0.2.data/scripts
2023-09-11T06:54:10,322   INFO:root:copying build/scripts-3.11/rnaConvert.py -> build/bdist.linux-armv7l/wheel/forgi-2.0.2.data/scripts
2023-09-11T06:54:10,324   INFO:root:copying build/scripts-3.11/pseudoknot_analyzer.py -> build/bdist.linux-armv7l/wheel/forgi-2.0.2.data/scripts
2023-09-11T06:54:10,326   INFO:root:changing mode of build/bdist.linux-armv7l/wheel/forgi-2.0.2.data/scripts/forgi_config.py to 755
2023-09-11T06:54:10,327   INFO:root:changing mode of build/bdist.linux-armv7l/wheel/forgi-2.0.2.data/scripts/describe_cg.py to 755
2023-09-11T06:54:10,327   INFO:root:changing mode of build/bdist.linux-armv7l/wheel/forgi-2.0.2.data/scripts/compare_RNA.py to 755
2023-09-11T06:54:10,328   INFO:root:changing mode of build/bdist.linux-armv7l/wheel/forgi-2.0.2.data/scripts/visualize_rna.py to 755
2023-09-11T06:54:10,328   INFO:root:changing mode of build/bdist.linux-armv7l/wheel/forgi-2.0.2.data/scripts/rnaConvert.py to 755
2023-09-11T06:54:10,329   INFO:root:changing mode of build/bdist.linux-armv7l/wheel/forgi-2.0.2.data/scripts/pseudoknot_analyzer.py to 755
2023-09-11T06:54:10,346   INFO:wheel:creating build/bdist.linux-armv7l/wheel/forgi-2.0.2.dist-info/WHEEL
2023-09-11T06:54:10,348   INFO:wheel:creating '/tmp/pip-wheel-m32frlel/forgi-2.0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-09-11T06:54:10,350   INFO:wheel:adding 'forgi/__init__.py'
2023-09-11T06:54:10,352   INFO:wheel:adding 'forgi/config.py'
2023-09-11T06:54:10,353   INFO:wheel:adding 'forgi/whitelist.py'
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2023-09-11T06:54:24,117   Building wheel for forgi (setup.py): finished with status 'done'
2023-09-11T06:54:24,465   Created wheel for forgi: filename=forgi-2.0.2-py3-none-any.whl size=27257987 sha256=dcdb892a0910c6bc2935f063bd1cd97567578112fdfd94b0ee3c8153a0ccfa9c
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