2023-09-11T14:29:43,900 Created temporary directory: /tmp/pip-build-tracker-6kmgcqys
2023-09-11T14:29:43,901 Initialized build tracking at /tmp/pip-build-tracker-6kmgcqys
2023-09-11T14:29:43,901 Created build tracker: /tmp/pip-build-tracker-6kmgcqys
2023-09-11T14:29:43,902 Entered build tracker: /tmp/pip-build-tracker-6kmgcqys
2023-09-11T14:29:43,903 Created temporary directory: /tmp/pip-wheel-nrgx4s0m
2023-09-11T14:29:43,906 Created temporary directory: /tmp/pip-ephem-wheel-cache-51a4pxwo
2023-09-11T14:29:43,927 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-11T14:29:43,931 2 location(s) to search for versions of deepgmap:
2023-09-11T14:29:43,931 * https://pypi.org/simple/deepgmap/
2023-09-11T14:29:43,931 * https://www.piwheels.org/simple/deepgmap/
2023-09-11T14:29:43,932 Fetching project page and analyzing links: https://pypi.org/simple/deepgmap/
2023-09-11T14:29:43,933 Getting page https://pypi.org/simple/deepgmap/
2023-09-11T14:29:43,934 Found index url https://pypi.org/simple/
2023-09-11T14:29:44,161 Fetched page https://pypi.org/simple/deepgmap/ as application/vnd.pypi.simple.v1+json
2023-09-11T14:29:44,162   Found link https://files.pythonhosted.org/packages/4a/7f/47d57c0bd8174630b133fbf1587f580100ab52a2629bbbc6e71471e400b3/DeepGMAP-0.2.0.tar.gz (from https://pypi.org/simple/deepgmap/), version: 0.2.0
2023-09-11T14:29:44,163 Fetching project page and analyzing links: https://www.piwheels.org/simple/deepgmap/
2023-09-11T14:29:44,164 Getting page https://www.piwheels.org/simple/deepgmap/
2023-09-11T14:29:44,165 Found index url https://www.piwheels.org/simple/
2023-09-11T14:29:44,428 Fetched page https://www.piwheels.org/simple/deepgmap/ as text/html
2023-09-11T14:29:44,431   Skipping link: No binaries permitted for deepgmap: https://www.piwheels.org/simple/deepgmap/DeepGMAP-0.2.0-cp35-cp35m-linux_armv6l.whl#sha256=48c09c6490025d98fd2acb44048400203c5c178546a3212caf1a22929e58c36c (from https://www.piwheels.org/simple/deepgmap/)
2023-09-11T14:29:44,431   Skipping link: No binaries permitted for deepgmap: https://www.piwheels.org/simple/deepgmap/DeepGMAP-0.2.0-cp35-cp35m-linux_armv7l.whl#sha256=48c09c6490025d98fd2acb44048400203c5c178546a3212caf1a22929e58c36c (from https://www.piwheels.org/simple/deepgmap/)
2023-09-11T14:29:44,432   Skipping link: No binaries permitted for deepgmap: https://www.piwheels.org/simple/deepgmap/DeepGMAP-0.2.0-cp37-cp37m-linux_armv6l.whl#sha256=d9134ecfcdd4b40969b17b572969dcb31c5376a80ecef536321d1b2f52b328d8 (from https://www.piwheels.org/simple/deepgmap/)
2023-09-11T14:29:44,432   Skipping link: No binaries permitted for deepgmap: https://www.piwheels.org/simple/deepgmap/DeepGMAP-0.2.0-cp37-cp37m-linux_armv7l.whl#sha256=d9134ecfcdd4b40969b17b572969dcb31c5376a80ecef536321d1b2f52b328d8 (from https://www.piwheels.org/simple/deepgmap/)
2023-09-11T14:29:44,433   Skipping link: No binaries permitted for deepgmap: https://www.piwheels.org/simple/deepgmap/DeepGMAP-0.2.0-cp39-cp39-linux_armv6l.whl#sha256=04547fbb85e5b272eca3fb50e66dbb322178152fbaf1a0db1f22036b69aee102 (from https://www.piwheels.org/simple/deepgmap/)
2023-09-11T14:29:44,434   Skipping link: No binaries permitted for deepgmap: https://www.piwheels.org/simple/deepgmap/DeepGMAP-0.2.0-cp39-cp39-linux_armv7l.whl#sha256=04547fbb85e5b272eca3fb50e66dbb322178152fbaf1a0db1f22036b69aee102 (from https://www.piwheels.org/simple/deepgmap/)
2023-09-11T14:29:44,434 Skipping link: not a file: https://www.piwheels.org/simple/deepgmap/
2023-09-11T14:29:44,435 Skipping link: not a file: https://pypi.org/simple/deepgmap/
2023-09-11T14:29:44,453 Given no hashes to check 1 links for project 'deepgmap': discarding no candidates
2023-09-11T14:29:44,471 Collecting deepgmap==0.2.0
2023-09-11T14:29:44,474   Created temporary directory: /tmp/pip-unpack-vhn9q4u4
2023-09-11T14:29:44,797   Downloading DeepGMAP-0.2.0.tar.gz (191 kB)
2023-09-11T14:29:45,089   Added deepgmap==0.2.0 from https://files.pythonhosted.org/packages/4a/7f/47d57c0bd8174630b133fbf1587f580100ab52a2629bbbc6e71471e400b3/DeepGMAP-0.2.0.tar.gz to build tracker '/tmp/pip-build-tracker-6kmgcqys'
2023-09-11T14:29:45,090   Running setup.py (path:/tmp/pip-wheel-nrgx4s0m/deepgmap_b89d5af758164eb39f97f23d88d7d26d/setup.py) egg_info for package deepgmap
2023-09-11T14:29:45,091   Created temporary directory: /tmp/pip-pip-egg-info-dmksezft
2023-09-11T14:29:45,092   Preparing metadata (setup.py): started
2023-09-11T14:29:45,093   Running command python setup.py egg_info
2023-09-11T14:29:46,126   running egg_info
2023-09-11T14:29:46,128   creating /tmp/pip-pip-egg-info-dmksezft/DeepGMAP.egg-info
2023-09-11T14:29:46,152   writing /tmp/pip-pip-egg-info-dmksezft/DeepGMAP.egg-info/PKG-INFO
2023-09-11T14:29:46,155   writing dependency_links to /tmp/pip-pip-egg-info-dmksezft/DeepGMAP.egg-info/dependency_links.txt
2023-09-11T14:29:46,157   writing requirements to /tmp/pip-pip-egg-info-dmksezft/DeepGMAP.egg-info/requires.txt
2023-09-11T14:29:46,158   writing top-level names to /tmp/pip-pip-egg-info-dmksezft/DeepGMAP.egg-info/top_level.txt
2023-09-11T14:29:46,159   writing manifest file '/tmp/pip-pip-egg-info-dmksezft/DeepGMAP.egg-info/SOURCES.txt'
2023-09-11T14:29:46,265   reading manifest file '/tmp/pip-pip-egg-info-dmksezft/DeepGMAP.egg-info/SOURCES.txt'
2023-09-11T14:29:46,270   writing manifest file '/tmp/pip-pip-egg-info-dmksezft/DeepGMAP.egg-info/SOURCES.txt'
2023-09-11T14:29:46,379   Preparing metadata (setup.py): finished with status 'done'
2023-09-11T14:29:46,383   Source in /tmp/pip-wheel-nrgx4s0m/deepgmap_b89d5af758164eb39f97f23d88d7d26d has version 0.2.0, which satisfies requirement deepgmap==0.2.0 from https://files.pythonhosted.org/packages/4a/7f/47d57c0bd8174630b133fbf1587f580100ab52a2629bbbc6e71471e400b3/DeepGMAP-0.2.0.tar.gz
2023-09-11T14:29:46,384   Removed deepgmap==0.2.0 from https://files.pythonhosted.org/packages/4a/7f/47d57c0bd8174630b133fbf1587f580100ab52a2629bbbc6e71471e400b3/DeepGMAP-0.2.0.tar.gz from build tracker '/tmp/pip-build-tracker-6kmgcqys'
2023-09-11T14:29:46,389 Created temporary directory: /tmp/pip-unpack-ycic9es_
2023-09-11T14:29:46,390 Created temporary directory: /tmp/pip-unpack-ka0x8x9m
2023-09-11T14:29:46,400 Building wheels for collected packages: deepgmap
2023-09-11T14:29:46,404   Created temporary directory: /tmp/pip-wheel-3lavu14c
2023-09-11T14:29:46,404   Building wheel for deepgmap (setup.py): started
2023-09-11T14:29:46,405   Destination directory: /tmp/pip-wheel-3lavu14c
2023-09-11T14:29:46,406   Running command python setup.py bdist_wheel
2023-09-11T14:29:47,868   running bdist_wheel
2023-09-11T14:29:47,937   running build
2023-09-11T14:29:47,937   running build_py
2023-09-11T14:29:47,963   creating build
2023-09-11T14:29:47,963   creating build/lib.linux-armv7l-cpython-311
2023-09-11T14:29:47,964   creating build/lib.linux-armv7l-cpython-311/deepgmap
2023-09-11T14:29:47,965   copying deepgmap/__init__.py -> build/lib.linux-armv7l-cpython-311/deepgmap
2023-09-11T14:29:47,967   creating build/lib.linux-armv7l-cpython-311/deepgmap/train
2023-09-11T14:29:47,969   copying deepgmap/train/deepshark_local_oop_1d.py -> build/lib.linux-armv7l-cpython-311/deepgmap/train
2023-09-11T14:29:47,971   copying deepgmap/train/__init__.py -> build/lib.linux-armv7l-cpython-311/deepgmap/train
2023-09-11T14:29:47,973   copying deepgmap/train/train_loop.py -> build/lib.linux-armv7l-cpython-311/deepgmap/train
2023-09-11T14:29:47,976   creating build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:47,977   copying deepgmap/network_constructors/conv3frss.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:47,980   copying deepgmap/network_constructors/conv4frssplus3.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:47,982   copying deepgmap/network_constructors/__init__.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:47,983   copying deepgmap/network_constructors/auc_calc.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:47,985   copying deepgmap/network_constructors/conv4frssplus4.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:47,988   copying deepgmap/network_constructors/conv4frss3.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:47,990   copying deepgmap/network_constructors/danq4.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:47,992   copying deepgmap/network_constructors/danq3.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:47,994   copying deepgmap/network_constructors/conv4frss2.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:47,997   copying deepgmap/network_constructors/conv4frssplus.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:47,999   copying deepgmap/network_constructors/conv3rc.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:48,001   copying deepgmap/network_constructors/conv4.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:48,003   copying deepgmap/network_constructors/deepsea.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:48,005   copying deepgmap/network_constructors/basset.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:48,008   copying deepgmap/network_constructors/danqfrss.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:48,010   copying deepgmap/network_constructors/danqblock.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:48,012   copying deepgmap/network_constructors/template_model.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:48,014   copying deepgmap/network_constructors/danq.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:48,016   copying deepgmap/network_constructors/conv4frss.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:48,019   copying deepgmap/network_constructors/conv4frssplus2.py -> build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors
2023-09-11T14:29:48,022   creating build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,023   copying deepgmap/post_train_tools/sequence_visualizer2.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,025   copying deepgmap/post_train_tools/motif_compare.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,027   copying deepgmap/post_train_tools/randomize_labels.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,029   copying deepgmap/post_train_tools/deconvolution_to_signal.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,031   copying deepgmap/post_train_tools/precision_recall_handmade.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,033   copying deepgmap/post_train_tools/compare_narrowPeak_scores.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,035   copying deepgmap/post_train_tools/__init__.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,036   copying deepgmap/post_train_tools/Clustering_analizer.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,038   copying deepgmap/post_train_tools/ROC_space_plotter2.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,040   copying deepgmap/post_train_tools/sequence_visualizer.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,042   copying deepgmap/post_train_tools/ROC_space_plotter3.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,044   copying deepgmap/post_train_tools/motif_compare2.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,046   copying deepgmap/post_train_tools/trained_deepshark_local_pca.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,048   copying deepgmap/post_train_tools/unpooling.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,050   copying deepgmap/post_train_tools/deconv_deepshark_local4.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,052   copying deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_gwas.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,054   copying deepgmap/post_train_tools/deconv_deepshark_local3.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,056   copying deepgmap/post_train_tools/merge_bigwig.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,058   copying deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_p.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,060   copying deepgmap/post_train_tools/PCA.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,061   copying deepgmap/post_train_tools/liftover_indiv_genome_to_hg38.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,063   copying deepgmap/post_train_tools/trained_deepshark_local_multiple_label.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,065   copying deepgmap/post_train_tools/deconv_deepshark_local_extend.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,067   copying deepgmap/post_train_tools/activation_maximization.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,069   copying deepgmap/post_train_tools/ROC_space_plotter.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,070   copying deepgmap/post_train_tools/trained_deepshark_local2_for_deepsea_data.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,072   copying deepgmap/post_train_tools/class_saliency_extraction.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,075   copying deepgmap/post_train_tools/kernel_visualizer2.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,077   copying deepgmap/post_train_tools/kernel_visualizer.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,079   copying deepgmap/post_train_tools/predict.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,081   copying deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_p2.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,083   copying deepgmap/post_train_tools/fimo_to_numpy_array.py -> build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:29:48,086   creating build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,087   copying deepgmap/data_preprocessing_tools/genome_labeling_compare.py -> build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,089   copying deepgmap/data_preprocessing_tools/inputGenerator_from_deepsea.py -> build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,091   copying deepgmap/data_preprocessing_tools/bed_file_500_add_seq.py -> build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,092   copying deepgmap/data_preprocessing_tools/remove_variant_annotations.py -> build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,094   copying deepgmap/data_preprocessing_tools/remove_chr.py -> build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,095   copying deepgmap/data_preprocessing_tools/genome_labeling.py -> build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,097   copying deepgmap/data_preprocessing_tools/__init__.py -> build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,099   copying deepgmap/data_preprocessing_tools/seq_to_binary.py -> build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,100   copying deepgmap/data_preprocessing_tools/genome_divider.py -> build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,102   copying deepgmap/data_preprocessing_tools/setup.py -> build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,104   copying deepgmap/data_preprocessing_tools/input_generator_from_narrowPeaks2.py -> build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,106   copying deepgmap/data_preprocessing_tools/genome_file_maker.py -> build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,107   copying deepgmap/data_preprocessing_tools/pick_one_chromosome.py -> build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,109   copying deepgmap/data_preprocessing_tools/inputfileGenerator_multiple_label3.py -> build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,111   copying deepgmap/data_preprocessing_tools/bed_file_500_add_seq2.py -> build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,113   copying deepgmap/data_preprocessing_tools/remove_excess_negatives.py -> build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,114   copying deepgmap/data_preprocessing_tools/input_generator_from_narrowPeaks_tar.py -> build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,116   copying deepgmap/data_preprocessing_tools/genome_labeling2.py -> build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,118   copying deepgmap/data_preprocessing_tools/bed_file_500.py -> build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:48,121   creating build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,122   copying deepgmap/misc/edit_labeled_file.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,124   copying deepgmap/misc/fasta_file_from_labeled.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,126   copying deepgmap/misc/__init__.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,127   copying deepgmap/misc/gff_to_colored_bed.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,129   copying deepgmap/misc/optimal_frip_cutoff.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,130   copying deepgmap/misc/dataset_checker_multiple_label.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,132   copying deepgmap/misc/dataset_checker.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,133   copying deepgmap/misc/TSS_bedfile.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,135   copying deepgmap/misc/bed_file_compare.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,137   copying deepgmap/misc/fix_fasta.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,138   copying deepgmap/misc/compare_deepsea_data.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,140   copying deepgmap/misc/reduce_negatives.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,142   copying deepgmap/misc/box_plot.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,143   copying deepgmap/misc/kernel_distribution_analizer.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,145   copying deepgmap/misc/bed_file_compare2.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,147   copying deepgmap/misc/Constants.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,148   copying deepgmap/misc/randomdna2.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,150   copying deepgmap/misc/deepsea_anal.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,152   copying deepgmap/misc/motif_logo_creator.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,154   copying deepgmap/misc/pickup_pos_seq_region.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,155   copying deepgmap/misc/small_tools.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,157   copying deepgmap/misc/randomdna.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,158   copying deepgmap/misc/spearman_r.py -> build/lib.linux-armv7l-cpython-311/deepgmap/misc
2023-09-11T14:29:48,165   running build_ext
2023-09-11T14:29:48,673   Compiling deepgmap/data_preprocessing_tools/seq_to_binary2.pyx because it changed.
2023-09-11T14:29:48,673   [1/1] Cythonizing deepgmap/data_preprocessing_tools/seq_to_binary2.pyx
2023-09-11T14:29:49,745   /usr/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-nrgx4s0m/deepgmap_b89d5af758164eb39f97f23d88d7d26d/deepgmap/data_preprocessing_tools/seq_to_binary2.pyx
2023-09-11T14:29:49,746     tree = Parsing.p_module(s, pxd, full_module_name)
2023-09-11T14:29:50,456   building 'deepgmap.data_preprocessing_tools.seq_to_binary2' extension
2023-09-11T14:29:50,457   creating build/temp.linux-armv7l-cpython-311
2023-09-11T14:29:50,457   creating build/temp.linux-armv7l-cpython-311/deepgmap
2023-09-11T14:29:50,458   creating build/temp.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools
2023-09-11T14:29:50,459   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c deepgmap/data_preprocessing_tools/seq_to_binary2.c -o build/temp.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/seq_to_binary2.o
2023-09-11T14:30:02,553   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/seq_to_binary2.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/seq_to_binary2.cpython-311-arm-linux-gnueabihf.so
2023-09-11T14:30:02,673   Compiling deepgmap/post_train_tools/cython_util.pyx because it changed.
2023-09-11T14:30:02,673   [1/1] Cythonizing deepgmap/post_train_tools/cython_util.pyx
2023-09-11T14:30:02,682   /usr/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-nrgx4s0m/deepgmap_b89d5af758164eb39f97f23d88d7d26d/deepgmap/post_train_tools/cython_util.pyx
2023-09-11T14:30:02,683     tree = Parsing.p_module(s, pxd, full_module_name)
2023-09-11T14:30:03,194   building 'deepgmap.post_train_tools.cython_util' extension
2023-09-11T14:30:03,195   creating build/temp.linux-armv7l-cpython-311/deepgmap/post_train_tools
2023-09-11T14:30:03,196   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c deepgmap/post_train_tools/cython_util.c -o build/temp.linux-armv7l-cpython-311/deepgmap/post_train_tools/cython_util.o
2023-09-11T14:30:20,260   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/deepgmap/post_train_tools/cython_util.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/cython_util.cpython-311-arm-linux-gnueabihf.so
2023-09-11T14:30:20,374   running build_scripts
2023-09-11T14:30:20,374   creating build/scripts-3.11
2023-09-11T14:30:20,376   copying and adjusting bin/deepgmap -> build/scripts-3.11
2023-09-11T14:30:20,378   changing mode of build/scripts-3.11/deepgmap from 644 to 755
2023-09-11T14:30:20,404   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-09-11T14:30:20,405   !!

2023-09-11T14:30:20,405           ********************************************************************************
2023-09-11T14:30:20,406           Please avoid running ``setup.py`` directly.
2023-09-11T14:30:20,406           Instead, use pypa/build, pypa/installer or other
2023-09-11T14:30:20,407           standards-based tools.

2023-09-11T14:30:20,408           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-09-11T14:30:20,408           ********************************************************************************

2023-09-11T14:30:20,409   !!
2023-09-11T14:30:20,409     self.initialize_options()
2023-09-11T14:30:20,430   installing to build/bdist.linux-armv7l/wheel
2023-09-11T14:30:20,430   running install
2023-09-11T14:30:20,454   running install_lib
2023-09-11T14:30:20,478   creating build/bdist.linux-armv7l
2023-09-11T14:30:20,479   creating build/bdist.linux-armv7l/wheel
2023-09-11T14:30:20,480   creating build/bdist.linux-armv7l/wheel/deepgmap
2023-09-11T14:30:20,481   copying build/lib.linux-armv7l-cpython-311/deepgmap/__init__.py -> build/bdist.linux-armv7l/wheel/deepgmap
2023-09-11T14:30:20,483   creating build/bdist.linux-armv7l/wheel/deepgmap/train
2023-09-11T14:30:20,484   copying build/lib.linux-armv7l-cpython-311/deepgmap/train/deepshark_local_oop_1d.py -> build/bdist.linux-armv7l/wheel/deepgmap/train
2023-09-11T14:30:20,487   copying build/lib.linux-armv7l-cpython-311/deepgmap/train/__init__.py -> build/bdist.linux-armv7l/wheel/deepgmap/train
2023-09-11T14:30:20,488   copying build/lib.linux-armv7l-cpython-311/deepgmap/train/train_loop.py -> build/bdist.linux-armv7l/wheel/deepgmap/train
2023-09-11T14:30:20,492   creating build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,492   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/genome_labeling_compare.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,495   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/inputGenerator_from_deepsea.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,497   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/bed_file_500_add_seq.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,498   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/remove_variant_annotations.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,500   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/remove_chr.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,502   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/genome_labeling.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,504   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/__init__.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,505   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/seq_to_binary2.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,518   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/seq_to_binary.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,520   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/genome_divider.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,522   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/setup.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,523   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/input_generator_from_narrowPeaks2.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,526   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/genome_file_maker.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,528   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/pick_one_chromosome.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,529   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/inputfileGenerator_multiple_label3.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,531   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/bed_file_500_add_seq2.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,533   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/remove_excess_negatives.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,535   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/input_generator_from_narrowPeaks_tar.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,537   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/genome_labeling2.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,539   copying build/lib.linux-armv7l-cpython-311/deepgmap/data_preprocessing_tools/bed_file_500.py -> build/bdist.linux-armv7l/wheel/deepgmap/data_preprocessing_tools
2023-09-11T14:30:20,541   creating build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,542   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/edit_labeled_file.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,544   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/fasta_file_from_labeled.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,546   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/__init__.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,547   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/gff_to_colored_bed.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,549   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/optimal_frip_cutoff.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,551   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/dataset_checker_multiple_label.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,552   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/dataset_checker.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,554   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/TSS_bedfile.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,556   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/bed_file_compare.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,557   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/fix_fasta.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,559   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/compare_deepsea_data.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,561   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/reduce_negatives.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,563   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/box_plot.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,565   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/kernel_distribution_analizer.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,567   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/bed_file_compare2.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,568   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/Constants.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,570   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/randomdna2.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,572   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/deepsea_anal.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,573   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/motif_logo_creator.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,575   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/pickup_pos_seq_region.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,577   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/small_tools.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,578   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/randomdna.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,580   copying build/lib.linux-armv7l-cpython-311/deepgmap/misc/spearman_r.py -> build/bdist.linux-armv7l/wheel/deepgmap/misc
2023-09-11T14:30:20,582   creating build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,583   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/conv3frss.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,585   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/conv4frssplus3.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,588   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/__init__.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,589   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/auc_calc.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,591   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/conv4frssplus4.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,593   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/conv4frss3.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,596   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/danq4.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,598   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/danq3.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,600   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/conv4frss2.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,603   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/conv4frssplus.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,605   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/conv3rc.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,607   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/conv4.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,610   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/deepsea.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,612   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/basset.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,614   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/danqfrss.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,617   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/danqblock.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,619   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/template_model.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,621   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/danq.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,623   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/conv4frss.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,625   copying build/lib.linux-armv7l-cpython-311/deepgmap/network_constructors/conv4frssplus2.py -> build/bdist.linux-armv7l/wheel/deepgmap/network_constructors
2023-09-11T14:30:20,629   creating build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,629   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/sequence_visualizer2.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,631   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/motif_compare.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,633   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/randomize_labels.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,635   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/deconvolution_to_signal.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,637   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/precision_recall_handmade.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,639   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/compare_narrowPeak_scores.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,641   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/__init__.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,642   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/Clustering_analizer.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,644   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/ROC_space_plotter2.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,646   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/sequence_visualizer.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,648   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/ROC_space_plotter3.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,650   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/motif_compare2.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,651   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/trained_deepshark_local_pca.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,654   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/unpooling.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,656   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/deconv_deepshark_local4.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,658   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_gwas.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,660   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/deconv_deepshark_local3.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,663   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/merge_bigwig.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,664   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_p.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,666   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/PCA.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,668   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/liftover_indiv_genome_to_hg38.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,669   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/cython_util.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,680   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/trained_deepshark_local_multiple_label.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,682   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/deconv_deepshark_local_extend.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,684   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/activation_maximization.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,687   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/ROC_space_plotter.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,688   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/trained_deepshark_local2_for_deepsea_data.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,691   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/class_saliency_extraction.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,694   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/kernel_visualizer2.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,696   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/kernel_visualizer.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,699   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/predict.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,701   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_p2.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,703   copying build/lib.linux-armv7l-cpython-311/deepgmap/post_train_tools/fimo_to_numpy_array.py -> build/bdist.linux-armv7l/wheel/deepgmap/post_train_tools
2023-09-11T14:30:20,706   running install_egg_info
2023-09-11T14:30:20,767   running egg_info
2023-09-11T14:30:20,791   writing DeepGMAP.egg-info/PKG-INFO
2023-09-11T14:30:20,795   writing dependency_links to DeepGMAP.egg-info/dependency_links.txt
2023-09-11T14:30:20,796   writing requirements to DeepGMAP.egg-info/requires.txt
2023-09-11T14:30:20,798   writing top-level names to DeepGMAP.egg-info/top_level.txt
2023-09-11T14:30:20,837   reading manifest file 'DeepGMAP.egg-info/SOURCES.txt'
2023-09-11T14:30:20,846   writing manifest file 'DeepGMAP.egg-info/SOURCES.txt'
2023-09-11T14:30:20,849   Copying DeepGMAP.egg-info to build/bdist.linux-armv7l/wheel/DeepGMAP-0.2.0-py3.11.egg-info
2023-09-11T14:30:20,859   running install_scripts
2023-09-11T14:30:20,860   creating build/bdist.linux-armv7l/wheel/DeepGMAP-0.2.0.data
2023-09-11T14:30:20,861   creating build/bdist.linux-armv7l/wheel/DeepGMAP-0.2.0.data/scripts
2023-09-11T14:30:20,863   copying build/scripts-3.11/deepgmap -> build/bdist.linux-armv7l/wheel/DeepGMAP-0.2.0.data/scripts
2023-09-11T14:30:20,866   changing mode of build/bdist.linux-armv7l/wheel/DeepGMAP-0.2.0.data/scripts/deepgmap to 755
2023-09-11T14:30:20,927   creating build/bdist.linux-armv7l/wheel/DeepGMAP-0.2.0.dist-info/WHEEL
2023-09-11T14:30:20,932   creating '/tmp/pip-wheel-3lavu14c/DeepGMAP-0.2.0-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-09-11T14:30:20,937   adding 'DeepGMAP-0.2.0.data/scripts/deepgmap'
2023-09-11T14:30:20,941   adding 'deepgmap/__init__.py'
2023-09-11T14:30:20,944   adding 'deepgmap/data_preprocessing_tools/__init__.py'
2023-09-11T14:30:20,946   adding 'deepgmap/data_preprocessing_tools/bed_file_500.py'
2023-09-11T14:30:20,948   adding 'deepgmap/data_preprocessing_tools/bed_file_500_add_seq.py'
2023-09-11T14:30:20,950   adding 'deepgmap/data_preprocessing_tools/bed_file_500_add_seq2.py'
2023-09-11T14:30:20,953   adding 'deepgmap/data_preprocessing_tools/genome_divider.py'
2023-09-11T14:30:20,955   adding 'deepgmap/data_preprocessing_tools/genome_file_maker.py'
2023-09-11T14:30:20,958   adding 'deepgmap/data_preprocessing_tools/genome_labeling.py'
2023-09-11T14:30:20,960   adding 'deepgmap/data_preprocessing_tools/genome_labeling2.py'
2023-09-11T14:30:20,963   adding 'deepgmap/data_preprocessing_tools/genome_labeling_compare.py'
2023-09-11T14:30:20,965   adding 'deepgmap/data_preprocessing_tools/inputGenerator_from_deepsea.py'
2023-09-11T14:30:20,968   adding 'deepgmap/data_preprocessing_tools/input_generator_from_narrowPeaks2.py'
2023-09-11T14:30:20,970   adding 'deepgmap/data_preprocessing_tools/input_generator_from_narrowPeaks_tar.py'
2023-09-11T14:30:20,973   adding 'deepgmap/data_preprocessing_tools/inputfileGenerator_multiple_label3.py'
2023-09-11T14:30:20,975   adding 'deepgmap/data_preprocessing_tools/pick_one_chromosome.py'
2023-09-11T14:30:20,976   adding 'deepgmap/data_preprocessing_tools/remove_chr.py'
2023-09-11T14:30:20,977   adding 'deepgmap/data_preprocessing_tools/remove_excess_negatives.py'
2023-09-11T14:30:20,979   adding 'deepgmap/data_preprocessing_tools/remove_variant_annotations.py'
2023-09-11T14:30:20,980   adding 'deepgmap/data_preprocessing_tools/seq_to_binary.py'
2023-09-11T14:30:21,084   adding 'deepgmap/data_preprocessing_tools/seq_to_binary2.cpython-311-arm-linux-gnueabihf.so'
2023-09-11T14:30:21,089   adding 'deepgmap/data_preprocessing_tools/setup.py'
2023-09-11T14:30:21,092   adding 'deepgmap/misc/Constants.py'
2023-09-11T14:30:21,093   adding 'deepgmap/misc/TSS_bedfile.py'
2023-09-11T14:30:21,094   adding 'deepgmap/misc/__init__.py'
2023-09-11T14:30:21,095   adding 'deepgmap/misc/bed_file_compare.py'
2023-09-11T14:30:21,097   adding 'deepgmap/misc/bed_file_compare2.py'
2023-09-11T14:30:21,098   adding 'deepgmap/misc/box_plot.py'
2023-09-11T14:30:21,099   adding 'deepgmap/misc/compare_deepsea_data.py'
2023-09-11T14:30:21,100   adding 'deepgmap/misc/dataset_checker.py'
2023-09-11T14:30:21,102   adding 'deepgmap/misc/dataset_checker_multiple_label.py'
2023-09-11T14:30:21,103   adding 'deepgmap/misc/deepsea_anal.py'
2023-09-11T14:30:21,104   adding 'deepgmap/misc/edit_labeled_file.py'
2023-09-11T14:30:21,105   adding 'deepgmap/misc/fasta_file_from_labeled.py'
2023-09-11T14:30:21,107   adding 'deepgmap/misc/fix_fasta.py'
2023-09-11T14:30:21,108   adding 'deepgmap/misc/gff_to_colored_bed.py'
2023-09-11T14:30:21,110   adding 'deepgmap/misc/kernel_distribution_analizer.py'
2023-09-11T14:30:21,111   adding 'deepgmap/misc/motif_logo_creator.py'
2023-09-11T14:30:21,112   adding 'deepgmap/misc/optimal_frip_cutoff.py'
2023-09-11T14:30:21,114   adding 'deepgmap/misc/pickup_pos_seq_region.py'
2023-09-11T14:30:21,115   adding 'deepgmap/misc/randomdna.py'
2023-09-11T14:30:21,116   adding 'deepgmap/misc/randomdna2.py'
2023-09-11T14:30:21,118   adding 'deepgmap/misc/reduce_negatives.py'
2023-09-11T14:30:21,119   adding 'deepgmap/misc/small_tools.py'
2023-09-11T14:30:21,120   adding 'deepgmap/misc/spearman_r.py'
2023-09-11T14:30:21,122   adding 'deepgmap/network_constructors/__init__.py'
2023-09-11T14:30:21,123   adding 'deepgmap/network_constructors/auc_calc.py'
2023-09-11T14:30:21,125   adding 'deepgmap/network_constructors/basset.py'
2023-09-11T14:30:21,127   adding 'deepgmap/network_constructors/conv3frss.py'
2023-09-11T14:30:21,129   adding 'deepgmap/network_constructors/conv3rc.py'
2023-09-11T14:30:21,131   adding 'deepgmap/network_constructors/conv4.py'
2023-09-11T14:30:21,133   adding 'deepgmap/network_constructors/conv4frss.py'
2023-09-11T14:30:21,135   adding 'deepgmap/network_constructors/conv4frss2.py'
2023-09-11T14:30:21,137   adding 'deepgmap/network_constructors/conv4frss3.py'
2023-09-11T14:30:21,139   adding 'deepgmap/network_constructors/conv4frssplus.py'
2023-09-11T14:30:21,141   adding 'deepgmap/network_constructors/conv4frssplus2.py'
2023-09-11T14:30:21,143   adding 'deepgmap/network_constructors/conv4frssplus3.py'
2023-09-11T14:30:21,145   adding 'deepgmap/network_constructors/conv4frssplus4.py'
2023-09-11T14:30:21,147   adding 'deepgmap/network_constructors/danq.py'
2023-09-11T14:30:21,149   adding 'deepgmap/network_constructors/danq3.py'
2023-09-11T14:30:21,151   adding 'deepgmap/network_constructors/danq4.py'
2023-09-11T14:30:21,153   adding 'deepgmap/network_constructors/danqblock.py'
2023-09-11T14:30:21,155   adding 'deepgmap/network_constructors/danqfrss.py'
2023-09-11T14:30:21,157   adding 'deepgmap/network_constructors/deepsea.py'
2023-09-11T14:30:21,158   adding 'deepgmap/network_constructors/template_model.py'
2023-09-11T14:30:21,160   adding 'deepgmap/post_train_tools/Clustering_analizer.py'
2023-09-11T14:30:21,162   adding 'deepgmap/post_train_tools/PCA.py'
2023-09-11T14:30:21,163   adding 'deepgmap/post_train_tools/ROC_space_plotter.py'
2023-09-11T14:30:21,165   adding 'deepgmap/post_train_tools/ROC_space_plotter2.py'
2023-09-11T14:30:21,166   adding 'deepgmap/post_train_tools/ROC_space_plotter3.py'
2023-09-11T14:30:21,167   adding 'deepgmap/post_train_tools/__init__.py'
2023-09-11T14:30:21,169   adding 'deepgmap/post_train_tools/activation_maximization.py'
2023-09-11T14:30:21,171   adding 'deepgmap/post_train_tools/class_saliency_extraction.py'
2023-09-11T14:30:21,172   adding 'deepgmap/post_train_tools/compare_narrowPeak_scores.py'
2023-09-11T14:30:21,289   adding 'deepgmap/post_train_tools/cython_util.cpython-311-arm-linux-gnueabihf.so'
2023-09-11T14:30:21,296   adding 'deepgmap/post_train_tools/deconv_deepshark_local3.py'
2023-09-11T14:30:21,298   adding 'deepgmap/post_train_tools/deconv_deepshark_local4.py'
2023-09-11T14:30:21,299   adding 'deepgmap/post_train_tools/deconv_deepshark_local_extend.py'
2023-09-11T14:30:21,301   adding 'deepgmap/post_train_tools/deconvolution_to_signal.py'
2023-09-11T14:30:21,302   adding 'deepgmap/post_train_tools/fimo_to_numpy_array.py'
2023-09-11T14:30:21,304   adding 'deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_gwas.py'
2023-09-11T14:30:21,305   adding 'deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_p.py'
2023-09-11T14:30:21,307   adding 'deepgmap/post_train_tools/inputfileGeneratorForGenomeScan_p2.py'
2023-09-11T14:30:21,309   adding 'deepgmap/post_train_tools/kernel_visualizer.py'
2023-09-11T14:30:21,311   adding 'deepgmap/post_train_tools/kernel_visualizer2.py'
2023-09-11T14:30:21,312   adding 'deepgmap/post_train_tools/liftover_indiv_genome_to_hg38.py'
2023-09-11T14:30:21,314   adding 'deepgmap/post_train_tools/merge_bigwig.py'
2023-09-11T14:30:21,315   adding 'deepgmap/post_train_tools/motif_compare.py'
2023-09-11T14:30:21,317   adding 'deepgmap/post_train_tools/motif_compare2.py'
2023-09-11T14:30:21,318   adding 'deepgmap/post_train_tools/precision_recall_handmade.py'
2023-09-11T14:30:21,320   adding 'deepgmap/post_train_tools/predict.py'
2023-09-11T14:30:21,322   adding 'deepgmap/post_train_tools/randomize_labels.py'
2023-09-11T14:30:21,323   adding 'deepgmap/post_train_tools/sequence_visualizer.py'
2023-09-11T14:30:21,325   adding 'deepgmap/post_train_tools/sequence_visualizer2.py'
2023-09-11T14:30:21,327   adding 'deepgmap/post_train_tools/trained_deepshark_local2_for_deepsea_data.py'
2023-09-11T14:30:21,328   adding 'deepgmap/post_train_tools/trained_deepshark_local_multiple_label.py'
2023-09-11T14:30:21,330   adding 'deepgmap/post_train_tools/trained_deepshark_local_pca.py'
2023-09-11T14:30:21,332   adding 'deepgmap/post_train_tools/unpooling.py'
2023-09-11T14:30:21,333   adding 'deepgmap/train/__init__.py'
2023-09-11T14:30:21,336   adding 'deepgmap/train/deepshark_local_oop_1d.py'
2023-09-11T14:30:21,338   adding 'deepgmap/train/train_loop.py'
2023-09-11T14:30:21,340   adding 'DeepGMAP-0.2.0.dist-info/METADATA'
2023-09-11T14:30:21,341   adding 'DeepGMAP-0.2.0.dist-info/WHEEL'
2023-09-11T14:30:21,342   adding 'DeepGMAP-0.2.0.dist-info/top_level.txt'
2023-09-11T14:30:21,344   adding 'DeepGMAP-0.2.0.dist-info/RECORD'
2023-09-11T14:30:21,352   removing build/bdist.linux-armv7l/wheel
2023-09-11T14:30:21,641   Building wheel for deepgmap (setup.py): finished with status 'done'
2023-09-11T14:30:21,652   Created wheel for deepgmap: filename=DeepGMAP-0.2.0-cp311-cp311-linux_armv7l.whl size=616859 sha256=22b9cd9df5ad0c149d2366b933a7fd914c146ff37e2c6004dd9ab22fb99517e2
2023-09-11T14:30:21,653   Stored in directory: /tmp/pip-ephem-wheel-cache-51a4pxwo/wheels/e8/58/52/7a180efe8bfd93aaa67bf358cc0253e36204b6a5176bf084e9
2023-09-11T14:30:21,666 Successfully built deepgmap
2023-09-11T14:30:21,692 Removed build tracker: '/tmp/pip-build-tracker-6kmgcqys'