2023-09-11T16:18:11,665 Created temporary directory: /tmp/pip-build-tracker-ttwf1s70
2023-09-11T16:18:11,666 Initialized build tracking at /tmp/pip-build-tracker-ttwf1s70
2023-09-11T16:18:11,667 Created build tracker: /tmp/pip-build-tracker-ttwf1s70
2023-09-11T16:18:11,667 Entered build tracker: /tmp/pip-build-tracker-ttwf1s70
2023-09-11T16:18:11,668 Created temporary directory: /tmp/pip-wheel-ukng76jn
2023-09-11T16:18:11,671 Created temporary directory: /tmp/pip-ephem-wheel-cache-q4h9xsua
2023-09-11T16:18:11,693 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-11T16:18:11,697 2 location(s) to search for versions of ssw-aligner:
2023-09-11T16:18:11,697 * https://pypi.org/simple/ssw-aligner/
2023-09-11T16:18:11,697 * https://www.piwheels.org/simple/ssw-aligner/
2023-09-11T16:18:11,698 Fetching project page and analyzing links: https://pypi.org/simple/ssw-aligner/
2023-09-11T16:18:11,698 Getting page https://pypi.org/simple/ssw-aligner/
2023-09-11T16:18:11,700 Found index url https://pypi.org/simple/
2023-09-11T16:18:11,843 Fetched page https://pypi.org/simple/ssw-aligner/ as application/vnd.pypi.simple.v1+json
2023-09-11T16:18:11,846   Found link https://files.pythonhosted.org/packages/26/c5/d6d45f897bcaabc6413b3eba32aceb83da292e4837d172fd478e679326ae/ssw_aligner-0.0.0.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.0
2023-09-11T16:18:11,847   Found link https://files.pythonhosted.org/packages/db/90/df5f1864262c4dfdca23700b93fd6f12e7525d050c2e3a059f756ce3cb5c/ssw_aligner-0.0.1.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.1
2023-09-11T16:18:11,847   Found link https://files.pythonhosted.org/packages/00/40/c2aee762db470efb345706da1fdafcba22fa9458f702f5867cbc2a2202f4/ssw_aligner-0.0.2.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.2
2023-09-11T16:18:11,848   Found link https://files.pythonhosted.org/packages/07/28/37a2fbf4b0bc91cc3d441524aec94dc8bb7a4f62fea679a6c25dbd3235c5/ssw_aligner-0.0.3.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.3
2023-09-11T16:18:11,849   Found link https://files.pythonhosted.org/packages/5c/c9/1b596cea0939fcde6549b0be70518b7bad3d23335006c5641438b3605813/ssw_aligner-0.0.4.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.4
2023-09-11T16:18:11,849   Found link https://files.pythonhosted.org/packages/96/3b/1fda982e7c2264d8164fd3cacd82a1a00de575a1eff68b3f86c578af2a7b/ssw_aligner-0.0.5.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.5
2023-09-11T16:18:11,850   Found link https://files.pythonhosted.org/packages/fe/60/131861d0d4250f27a65db140a09f8a208e5db084135ddbe7c7c580b45add/ssw_aligner-0.0.6.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.6
2023-09-11T16:18:11,850   Found link https://files.pythonhosted.org/packages/09/33/a6ec7a29e0c5112a4626e82de22f1d3041a9848deeedb0eb10b29f955fd0/ssw_aligner-0.0.7.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.7
2023-09-11T16:18:11,851   Found link https://files.pythonhosted.org/packages/77/9a/73d8f071e78956c30e012c3fc5f9735a0e28426dad0cb6fd534e26cdd7db/ssw_aligner-0.0.8.tar.gz (from https://pypi.org/simple/ssw-aligner/), version: 0.0.8
2023-09-11T16:18:11,852 Fetching project page and analyzing links: https://www.piwheels.org/simple/ssw-aligner/
2023-09-11T16:18:11,853 Getting page https://www.piwheels.org/simple/ssw-aligner/
2023-09-11T16:18:11,854 Found index url https://www.piwheels.org/simple/
2023-09-11T16:18:12,373 Fetched page https://www.piwheels.org/simple/ssw-aligner/ as text/html
2023-09-11T16:18:12,376 Skipping link: not a file: https://www.piwheels.org/simple/ssw-aligner/
2023-09-11T16:18:12,377 Skipping link: not a file: https://pypi.org/simple/ssw-aligner/
2023-09-11T16:18:12,413 Given no hashes to check 1 links for project 'ssw-aligner': discarding no candidates
2023-09-11T16:18:12,441 Collecting ssw-aligner==0.0.7
2023-09-11T16:18:12,445   Created temporary directory: /tmp/pip-unpack-6fid9owa
2023-09-11T16:18:12,754   Downloading ssw_aligner-0.0.7.tar.gz (105 kB)
2023-09-11T16:18:12,873   Added ssw-aligner==0.0.7 from https://files.pythonhosted.org/packages/09/33/a6ec7a29e0c5112a4626e82de22f1d3041a9848deeedb0eb10b29f955fd0/ssw_aligner-0.0.7.tar.gz to build tracker '/tmp/pip-build-tracker-ttwf1s70'
2023-09-11T16:18:12,875   Running setup.py (path:/tmp/pip-wheel-ukng76jn/ssw-aligner_2e5d70d215f6462bba4eff70fe74534e/setup.py) egg_info for package ssw-aligner
2023-09-11T16:18:12,876   Created temporary directory: /tmp/pip-pip-egg-info-x8f9klmr
2023-09-11T16:18:12,876   Preparing metadata (setup.py): started
2023-09-11T16:18:12,878   Running command python setup.py egg_info
2023-09-11T16:18:13,333   Traceback (most recent call last):
2023-09-11T16:18:13,333     File "/usr/local/lib/python3.11/dist-packages/numpy/core/__init__.py", line 23, in <module>
2023-09-11T16:18:13,334       from . import multiarray
2023-09-11T16:18:13,334     File "/usr/local/lib/python3.11/dist-packages/numpy/core/multiarray.py", line 10, in <module>
2023-09-11T16:18:13,335       from . import overrides
2023-09-11T16:18:13,335     File "/usr/local/lib/python3.11/dist-packages/numpy/core/overrides.py", line 8, in <module>
2023-09-11T16:18:13,336       from numpy.core._multiarray_umath import (
2023-09-11T16:18:13,337   ImportError: libopenblas.so.0: cannot open shared object file: No such file or directory

2023-09-11T16:18:13,338   During handling of the above exception, another exception occurred:

2023-09-11T16:18:13,340   Traceback (most recent call last):
2023-09-11T16:18:13,340     File "<string>", line 2, in <module>
2023-09-11T16:18:13,341     File "<pip-setuptools-caller>", line 34, in <module>
2023-09-11T16:18:13,342     File "/tmp/pip-wheel-ukng76jn/ssw-aligner_2e5d70d215f6462bba4eff70fe74534e/setup.py", line 4, in <module>
2023-09-11T16:18:13,342       import numpy as np
2023-09-11T16:18:13,343     File "/usr/local/lib/python3.11/dist-packages/numpy/__init__.py", line 139, in <module>
2023-09-11T16:18:13,344       from . import core
2023-09-11T16:18:13,345     File "/usr/local/lib/python3.11/dist-packages/numpy/core/__init__.py", line 49, in <module>
2023-09-11T16:18:13,346       raise ImportError(msg)
2023-09-11T16:18:13,347   ImportError:

2023-09-11T16:18:13,348   IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!

2023-09-11T16:18:13,350   Importing the numpy C-extensions failed. This error can happen for
2023-09-11T16:18:13,351   many reasons, often due to issues with your setup or how NumPy was
2023-09-11T16:18:13,351   installed.

2023-09-11T16:18:13,353   We have compiled some common reasons and troubleshooting tips at:

2023-09-11T16:18:13,355       https://numpy.org/devdocs/user/troubleshooting-importerror.html

2023-09-11T16:18:13,357   Please note and check the following:

2023-09-11T16:18:13,359     * The Python version is: Python3.11 from "/usr/bin/python3"
2023-09-11T16:18:13,359     * The NumPy version is: "1.25.2"

2023-09-11T16:18:13,361   and make sure that they are the versions you expect.
2023-09-11T16:18:13,362   Please carefully study the documentation linked above for further help.

2023-09-11T16:18:13,364   Original error was: libopenblas.so.0: cannot open shared object file: No such file or directory

2023-09-11T16:18:13,411   ERROR: [present-rich] python setup.py egg_info exited with 1
2023-09-11T16:18:13,424   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2023-09-11T16:18:13,424   exec(compile('"'"''"'"''"'"'
2023-09-11T16:18:13,424   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-11T16:18:13,424   #
2023-09-11T16:18:13,424   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-11T16:18:13,424   #   import from `distutils.core` to work with newer packaging standards.
2023-09-11T16:18:13,424   # - It provides a clear error message when setuptools is not installed.
2023-09-11T16:18:13,424   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-11T16:18:13,424   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-11T16:18:13,424   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-11T16:18:13,424   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-11T16:18:13,424   import os, sys, tokenize
2023-09-11T16:18:13,424   
2023-09-11T16:18:13,424   try:
2023-09-11T16:18:13,424       import setuptools
2023-09-11T16:18:13,424   except ImportError as error:
2023-09-11T16:18:13,424       print(
2023-09-11T16:18:13,424           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-11T16:18:13,424           "the build environment.",
2023-09-11T16:18:13,424           file=sys.stderr,
2023-09-11T16:18:13,424       )
2023-09-11T16:18:13,424       sys.exit(1)
2023-09-11T16:18:13,424   
2023-09-11T16:18:13,424   __file__ = %r
2023-09-11T16:18:13,424   sys.argv[0] = __file__
2023-09-11T16:18:13,424   
2023-09-11T16:18:13,424   if os.path.exists(__file__):
2023-09-11T16:18:13,424       filename = __file__
2023-09-11T16:18:13,424       with tokenize.open(__file__) as f:
2023-09-11T16:18:13,424           setup_py_code = f.read()
2023-09-11T16:18:13,424   else:
2023-09-11T16:18:13,424       filename = "<auto-generated setuptools caller>"
2023-09-11T16:18:13,424       setup_py_code = "from setuptools import setup; setup()"
2023-09-11T16:18:13,424   
2023-09-11T16:18:13,424   exec(compile(setup_py_code, filename, "exec"))
2023-09-11T16:18:13,424   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-ukng76jn/ssw-aligner_2e5d70d215f6462bba4eff70fe74534e/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-x8f9klmr[/]
2023-09-11T16:18:13,424   [bold magenta]cwd[/]: /tmp/pip-wheel-ukng76jn/ssw-aligner_2e5d70d215f6462bba4eff70fe74534e/
2023-09-11T16:18:13,425   Preparing metadata (setup.py): finished with status 'error'
2023-09-11T16:18:13,426 ERROR: [present-rich] metadata generation failed
2023-09-11T16:18:13,432 Exception information:
2023-09-11T16:18:13,432 Traceback (most recent call last):
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2023-09-11T16:18:13,432     call_subprocess(
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2023-09-11T16:18:13,432     raise error
2023-09-11T16:18:13,432 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2023-09-11T16:18:13,432 
2023-09-11T16:18:13,432 The above exception was the direct cause of the following exception:
2023-09-11T16:18:13,432 
2023-09-11T16:18:13,432 Traceback (most recent call last):
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-11T16:18:13,432     status = run_func(*args)
2023-09-11T16:18:13,432              ^^^^^^^^^^^^^^^
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-11T16:18:13,432     return func(self, options, args)
2023-09-11T16:18:13,432            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2023-09-11T16:18:13,432     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2023-09-11T16:18:13,432                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve
2023-09-11T16:18:13,432     result = self._result = resolver.resolve(
2023-09-11T16:18:13,432                             ^^^^^^^^^^^^^^^^^
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2023-09-11T16:18:13,432     state = resolution.resolve(requirements, max_rounds=max_rounds)
2023-09-11T16:18:13,432             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2023-09-11T16:18:13,432     self._add_to_criteria(self.state.criteria, r, parent=None)
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2023-09-11T16:18:13,432     if not criterion.candidates:
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2023-09-11T16:18:13,432     return bool(self._sequence)
2023-09-11T16:18:13,432            ^^^^^^^^^^^^^^^^^^^^
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2023-09-11T16:18:13,432     return any(self)
2023-09-11T16:18:13,432            ^^^^^^^^^
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2023-09-11T16:18:13,432     return (c for c in iterator if id(c) not in self._incompatible_ids)
2023-09-11T16:18:13,432            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2023-09-11T16:18:13,432     candidate = func()
2023-09-11T16:18:13,432                 ^^^^^^
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link
2023-09-11T16:18:13,432     self._link_candidate_cache[link] = LinkCandidate(
2023-09-11T16:18:13,432                                        ^^^^^^^^^^^^^^
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__
2023-09-11T16:18:13,432     super().__init__(
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
2023-09-11T16:18:13,432     self.dist = self._prepare()
2023-09-11T16:18:13,432                 ^^^^^^^^^^^^^^^
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare
2023-09-11T16:18:13,432     dist = self._prepare_distribution()
2023-09-11T16:18:13,432            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution
2023-09-11T16:18:13,432     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2023-09-11T16:18:13,432            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement
2023-09-11T16:18:13,432     return self._prepare_linked_requirement(req, parallel_builds)
2023-09-11T16:18:13,432            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement
2023-09-11T16:18:13,432     dist = _get_prepared_distribution(
2023-09-11T16:18:13,432            ^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution
2023-09-11T16:18:13,432     abstract_dist.prepare_distribution_metadata(
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata
2023-09-11T16:18:13,432     self.req.prepare_metadata()
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata
2023-09-11T16:18:13,432     self.metadata_directory = generate_metadata_legacy(
2023-09-11T16:18:13,432                               ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-11T16:18:13,432   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2023-09-11T16:18:13,432     raise MetadataGenerationFailed(package_details=details) from error
2023-09-11T16:18:13,432 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2023-09-11T16:18:13,445 Removed ssw-aligner==0.0.7 from https://files.pythonhosted.org/packages/09/33/a6ec7a29e0c5112a4626e82de22f1d3041a9848deeedb0eb10b29f955fd0/ssw_aligner-0.0.7.tar.gz from build tracker '/tmp/pip-build-tracker-ttwf1s70'
2023-09-11T16:18:13,446 Removed build tracker: '/tmp/pip-build-tracker-ttwf1s70'