2023-09-12T06:54:35,286 Created temporary directory: /tmp/pip-build-tracker-htxpw2co
2023-09-12T06:54:35,289 Initialized build tracking at /tmp/pip-build-tracker-htxpw2co
2023-09-12T06:54:35,289 Created build tracker: /tmp/pip-build-tracker-htxpw2co
2023-09-12T06:54:35,290 Entered build tracker: /tmp/pip-build-tracker-htxpw2co
2023-09-12T06:54:35,292 Created temporary directory: /tmp/pip-wheel-mqrxaro4
2023-09-12T06:54:35,297 Created temporary directory: /tmp/pip-ephem-wheel-cache-lxps1_qa
2023-09-12T06:54:35,335 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-12T06:54:35,340 2 location(s) to search for versions of schictools:
2023-09-12T06:54:35,340 * https://pypi.org/simple/schictools/
2023-09-12T06:54:35,340 * https://www.piwheels.org/simple/schictools/
2023-09-12T06:54:35,342 Fetching project page and analyzing links: https://pypi.org/simple/schictools/
2023-09-12T06:54:35,344 Getting page https://pypi.org/simple/schictools/
2023-09-12T06:54:35,347 Found index url https://pypi.org/simple/
2023-09-12T06:54:35,745 Fetched page https://pypi.org/simple/schictools/ as application/vnd.pypi.simple.v1+json
2023-09-12T06:54:35,747   Found link https://files.pythonhosted.org/packages/a2/9f/6b20e58eed146082c6e8d14d4313a5c6043366fed84f65c3222f8d2261a0/scHiCTools-0.0.1.tar.gz (from https://pypi.org/simple/schictools/), version: 0.0.1
2023-09-12T06:54:35,748   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/53/ec/9d17dbb761a4c9708dd4b11039636be052d0046b0e898edf3ef2d82c209d/scHiCTools-0.0.2-py3.7.egg (from https://pypi.org/simple/schictools/)
2023-09-12T06:54:35,748   Found link https://files.pythonhosted.org/packages/7a/d8/f23804803f0290950482e4500fad0f9756707ead98b04cf7218f6366979a/scHiCTools-0.0.2.tar.gz (from https://pypi.org/simple/schictools/), version: 0.0.2
2023-09-12T06:54:35,749   Found link https://files.pythonhosted.org/packages/6c/ad/aee71dfca03663492e178e39d23cba1c1f1a7baddd3bbedfcff207d346ca/scHiCTools-0.0.3.tar.gz (from https://pypi.org/simple/schictools/), version: 0.0.3
2023-09-12T06:54:35,750 Fetching project page and analyzing links: https://www.piwheels.org/simple/schictools/
2023-09-12T06:54:35,750 Getting page https://www.piwheels.org/simple/schictools/
2023-09-12T06:54:35,752 Found index url https://www.piwheels.org/simple/
2023-09-12T06:54:36,082 Fetched page https://www.piwheels.org/simple/schictools/ as text/html
2023-09-12T06:54:36,084 Skipping link: not a file: https://www.piwheels.org/simple/schictools/
2023-09-12T06:54:36,085 Skipping link: not a file: https://pypi.org/simple/schictools/
2023-09-12T06:54:36,104 Given no hashes to check 1 links for project 'schictools': discarding no candidates
2023-09-12T06:54:36,122 Collecting schictools==0.0.2
2023-09-12T06:54:36,125   Created temporary directory: /tmp/pip-unpack-glkkxcnz
2023-09-12T06:54:36,342   Downloading scHiCTools-0.0.2.tar.gz (44 kB)
2023-09-12T06:54:36,438   Added schictools==0.0.2 from https://files.pythonhosted.org/packages/7a/d8/f23804803f0290950482e4500fad0f9756707ead98b04cf7218f6366979a/scHiCTools-0.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-htxpw2co'
2023-09-12T06:54:36,440   Running setup.py (path:/tmp/pip-wheel-mqrxaro4/schictools_3637f5b35ffa4bfe8db3988584afb90a/setup.py) egg_info for package schictools
2023-09-12T06:54:36,441   Created temporary directory: /tmp/pip-pip-egg-info-pwrl7np4
2023-09-12T06:54:36,442   Preparing metadata (setup.py): started
2023-09-12T06:54:36,443   Running command python setup.py egg_info
2023-09-12T06:54:36,878   Traceback (most recent call last):
2023-09-12T06:54:36,878     File "<string>", line 2, in <module>
2023-09-12T06:54:36,879     File "<pip-setuptools-caller>", line 34, in <module>
2023-09-12T06:54:36,880     File "/tmp/pip-wheel-mqrxaro4/schictools_3637f5b35ffa4bfe8db3988584afb90a/setup.py", line 18, in <module>
2023-09-12T06:54:36,881       install_requires = get_requirements('requirements.txt')
2023-09-12T06:54:36,882                          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T06:54:36,883     File "/tmp/pip-wheel-mqrxaro4/schictools_3637f5b35ffa4bfe8db3988584afb90a/setup.py", line 10, in get_requirements
2023-09-12T06:54:36,884       with open(path, "r") as fh:
2023-09-12T06:54:36,885            ^^^^^^^^^^^^^^^
2023-09-12T06:54:36,886   FileNotFoundError: [Errno 2] No such file or directory: 'requirements.txt'
2023-09-12T06:54:36,948   ERROR: [present-rich] python setup.py egg_info exited with 1
2023-09-12T06:54:36,961   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2023-09-12T06:54:36,961   exec(compile('"'"''"'"''"'"'
2023-09-12T06:54:36,961   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-12T06:54:36,961   #
2023-09-12T06:54:36,961   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-12T06:54:36,961   #   import from `distutils.core` to work with newer packaging standards.
2023-09-12T06:54:36,961   # - It provides a clear error message when setuptools is not installed.
2023-09-12T06:54:36,961   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-12T06:54:36,961   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-12T06:54:36,961   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-12T06:54:36,961   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-12T06:54:36,961   import os, sys, tokenize
2023-09-12T06:54:36,961   
2023-09-12T06:54:36,961   try:
2023-09-12T06:54:36,961       import setuptools
2023-09-12T06:54:36,961   except ImportError as error:
2023-09-12T06:54:36,961       print(
2023-09-12T06:54:36,961           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-12T06:54:36,961           "the build environment.",
2023-09-12T06:54:36,961           file=sys.stderr,
2023-09-12T06:54:36,961       )
2023-09-12T06:54:36,961       sys.exit(1)
2023-09-12T06:54:36,961   
2023-09-12T06:54:36,961   __file__ = %r
2023-09-12T06:54:36,961   sys.argv[0] = __file__
2023-09-12T06:54:36,961   
2023-09-12T06:54:36,961   if os.path.exists(__file__):
2023-09-12T06:54:36,961       filename = __file__
2023-09-12T06:54:36,961       with tokenize.open(__file__) as f:
2023-09-12T06:54:36,961           setup_py_code = f.read()
2023-09-12T06:54:36,961   else:
2023-09-12T06:54:36,961       filename = "<auto-generated setuptools caller>"
2023-09-12T06:54:36,961       setup_py_code = "from setuptools import setup; setup()"
2023-09-12T06:54:36,961   
2023-09-12T06:54:36,961   exec(compile(setup_py_code, filename, "exec"))
2023-09-12T06:54:36,961   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-mqrxaro4/schictools_3637f5b35ffa4bfe8db3988584afb90a/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-pwrl7np4[/]
2023-09-12T06:54:36,962   [bold magenta]cwd[/]: /tmp/pip-wheel-mqrxaro4/schictools_3637f5b35ffa4bfe8db3988584afb90a/
2023-09-12T06:54:36,962   Preparing metadata (setup.py): finished with status 'error'
2023-09-12T06:54:36,964 ERROR: [present-rich] metadata generation failed
2023-09-12T06:54:36,969 Exception information:
2023-09-12T06:54:36,969 Traceback (most recent call last):
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2023-09-12T06:54:36,969     call_subprocess(
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2023-09-12T06:54:36,969     raise error
2023-09-12T06:54:36,969 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2023-09-12T06:54:36,969 
2023-09-12T06:54:36,969 The above exception was the direct cause of the following exception:
2023-09-12T06:54:36,969 
2023-09-12T06:54:36,969 Traceback (most recent call last):
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-12T06:54:36,969     status = run_func(*args)
2023-09-12T06:54:36,969              ^^^^^^^^^^^^^^^
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-12T06:54:36,969     return func(self, options, args)
2023-09-12T06:54:36,969            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2023-09-12T06:54:36,969     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2023-09-12T06:54:36,969                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve
2023-09-12T06:54:36,969     result = self._result = resolver.resolve(
2023-09-12T06:54:36,969                             ^^^^^^^^^^^^^^^^^
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2023-09-12T06:54:36,969     state = resolution.resolve(requirements, max_rounds=max_rounds)
2023-09-12T06:54:36,969             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2023-09-12T06:54:36,969     self._add_to_criteria(self.state.criteria, r, parent=None)
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2023-09-12T06:54:36,969     if not criterion.candidates:
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2023-09-12T06:54:36,969     return bool(self._sequence)
2023-09-12T06:54:36,969            ^^^^^^^^^^^^^^^^^^^^
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2023-09-12T06:54:36,969     return any(self)
2023-09-12T06:54:36,969            ^^^^^^^^^
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2023-09-12T06:54:36,969     return (c for c in iterator if id(c) not in self._incompatible_ids)
2023-09-12T06:54:36,969            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2023-09-12T06:54:36,969     candidate = func()
2023-09-12T06:54:36,969                 ^^^^^^
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link
2023-09-12T06:54:36,969     self._link_candidate_cache[link] = LinkCandidate(
2023-09-12T06:54:36,969                                        ^^^^^^^^^^^^^^
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__
2023-09-12T06:54:36,969     super().__init__(
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
2023-09-12T06:54:36,969     self.dist = self._prepare()
2023-09-12T06:54:36,969                 ^^^^^^^^^^^^^^^
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare
2023-09-12T06:54:36,969     dist = self._prepare_distribution()
2023-09-12T06:54:36,969            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution
2023-09-12T06:54:36,969     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2023-09-12T06:54:36,969            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement
2023-09-12T06:54:36,969     return self._prepare_linked_requirement(req, parallel_builds)
2023-09-12T06:54:36,969            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement
2023-09-12T06:54:36,969     dist = _get_prepared_distribution(
2023-09-12T06:54:36,969            ^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution
2023-09-12T06:54:36,969     abstract_dist.prepare_distribution_metadata(
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata
2023-09-12T06:54:36,969     self.req.prepare_metadata()
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata
2023-09-12T06:54:36,969     self.metadata_directory = generate_metadata_legacy(
2023-09-12T06:54:36,969                               ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T06:54:36,969   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2023-09-12T06:54:36,969     raise MetadataGenerationFailed(package_details=details) from error
2023-09-12T06:54:36,969 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2023-09-12T06:54:36,982 Removed schictools==0.0.2 from https://files.pythonhosted.org/packages/7a/d8/f23804803f0290950482e4500fad0f9756707ead98b04cf7218f6366979a/scHiCTools-0.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-htxpw2co'
2023-09-12T06:54:36,983 Removed build tracker: '/tmp/pip-build-tracker-htxpw2co'