2023-09-12T10:44:57,920 Created temporary directory: /tmp/pip-build-tracker-bigu1g0o 2023-09-12T10:44:57,921 Initialized build tracking at /tmp/pip-build-tracker-bigu1g0o 2023-09-12T10:44:57,921 Created build tracker: /tmp/pip-build-tracker-bigu1g0o 2023-09-12T10:44:57,922 Entered build tracker: /tmp/pip-build-tracker-bigu1g0o 2023-09-12T10:44:57,923 Created temporary directory: /tmp/pip-wheel-c__gy61i 2023-09-12T10:44:57,926 Created temporary directory: /tmp/pip-ephem-wheel-cache-_bs0b962 2023-09-12T10:44:57,947 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-12T10:44:57,950 2 location(s) to search for versions of gimmemotifs: 2023-09-12T10:44:57,950 * https://pypi.org/simple/gimmemotifs/ 2023-09-12T10:44:57,950 * https://www.piwheels.org/simple/gimmemotifs/ 2023-09-12T10:44:57,951 Fetching project page and analyzing links: https://pypi.org/simple/gimmemotifs/ 2023-09-12T10:44:57,952 Getting page https://pypi.org/simple/gimmemotifs/ 2023-09-12T10:44:57,953 Found index url https://pypi.org/simple/ 2023-09-12T10:44:58,174 Fetched page https://pypi.org/simple/gimmemotifs/ as application/vnd.pypi.simple.v1+json 2023-09-12T10:44:58,179 Found link https://files.pythonhosted.org/packages/3b/66/216440ec9d7e3c075bd26b6ab13132bcebb42fc2dd20a8886a6bec347976/gimmemotifs-0.8.9.1.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.8.9.1 2023-09-12T10:44:58,180 Found link https://files.pythonhosted.org/packages/9a/64/35a8f9fdbf3d212a5a4a797bf862df63a3b53e1858b1d18480a4f7cfe1e6/gimmemotifs-0.9.0.2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.9.0.2 2023-09-12T10:44:58,181 Found link https://files.pythonhosted.org/packages/65/94/7402fe33e86c472e392ac203838c4e6d2c07a3dc421998d5e1c38dbcdcac/gimmemotifs-0.9.0.3.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.9.0.3 2023-09-12T10:44:58,181 Found link https://files.pythonhosted.org/packages/99/73/fc665e610b200b170a2701ecb2d298b8f51c9792e44e12b47a803ed1cf9e/gimmemotifs-0.10.0b1.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b1 2023-09-12T10:44:58,182 Found link https://files.pythonhosted.org/packages/e5/3a/cd3a48bbd49c2cdf325616da57ebe50b12135a4f60111cc4960573f29524/gimmemotifs-0.10.0b2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b2 2023-09-12T10:44:58,183 Found link https://files.pythonhosted.org/packages/98/be/6fdb2557d262d2dfd365fa8502205c6a1f72cfa8029d0d9c3fdb9420f3ff/gimmemotifs-0.10.0b4.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b4 2023-09-12T10:44:58,183 Found link https://files.pythonhosted.org/packages/d3/83/2ffdbeb78227407f2ac3f4390f27257630709a3653a2c42926b181381f75/gimmemotifs-0.10.0b5.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b5 2023-09-12T10:44:58,184 Found link https://files.pythonhosted.org/packages/90/2c/f9493aeaaf1cf10742d7a7bf251dfbfe4a82d53f5222379b0466ac8cacfe/gimmemotifs-0.10.0b6.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b6 2023-09-12T10:44:58,185 Found link https://files.pythonhosted.org/packages/82/a3/34326512c0e9418729124bf9f5fd5da54a9792d5e99e84fe0653f3c38d2e/gimmemotifs-0.11.0b0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.11.0b0 2023-09-12T10:44:58,185 Found link https://files.pythonhosted.org/packages/6c/b7/f04441424da981f03b69c21f2aa534aa4c6cee7aaea4a5e6b1887116bb08/gimmemotifs-0.11.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.11.0 2023-09-12T10:44:58,186 Found link https://files.pythonhosted.org/packages/e9/c6/6b7e7069dbadc7d14ddab5483ef1c98e7532a3a92d66d89ef5cb59d0ac7a/gimmemotifs-0.11.1.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.11.1 2023-09-12T10:44:58,187 Found link https://files.pythonhosted.org/packages/53/5b/9251735efaf7a76ed7694c03a7a47cc21290f71d3958581a425da4682c47/gimmemotifs-0.12.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.12.0 2023-09-12T10:44:58,187 Found link https://files.pythonhosted.org/packages/66/76/ec3ff69655c4bbb8b606db6f45608125fe91e8568dd5858187f8b1b9379c/gimmemotifs-0.13.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.13.0 2023-09-12T10:44:58,188 Found link https://files.pythonhosted.org/packages/80/e9/84e4a077680c2c6e2baaca829ac660e910014c0aa57cd5dc915564a5a001/gimmemotifs-0.13.1.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.13.1 2023-09-12T10:44:58,189 Found link https://files.pythonhosted.org/packages/24/d1/8505a7798bf8e06f4a0b7a54b51bbcd9c9e5361d0dd1f3a89e78f2784c65/gimmemotifs-0.14.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.14.0 2023-09-12T10:44:58,190 Found link https://files.pythonhosted.org/packages/ef/4c/1a19f42d88f7fb47a1589a0c535a9dff9d75d1317a8a1a099ef0195348f9/gimmemotifs-0.14.2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.14.2 2023-09-12T10:44:58,190 Found link https://files.pythonhosted.org/packages/1a/7d/113454d4ef0e960500067e0e4a0d0ed105318749c2e18f5be6542f22df48/gimmemotifs-0.14.3.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.14.3 2023-09-12T10:44:58,191 Found link https://files.pythonhosted.org/packages/f6/71/681a72802e005601ad8da3b695ada4eea8e56e8bd1f14d42d4d7248a24a4/gimmemotifs-0.14.4.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.14.4 2023-09-12T10:44:58,191 Found link https://files.pythonhosted.org/packages/5f/d9/43302fdb777ca8bad9739d81804644090b25011be4a0d2f99188a8849b40/gimmemotifs-0.15.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.15.0 2023-09-12T10:44:58,192 Found link https://files.pythonhosted.org/packages/de/a5/9a3804dda5730092769519f38a7bc736488cff60cf7c8f0f2f71eeeca3e4/gimmemotifs-0.15.2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.15.2 2023-09-12T10:44:58,192 Found link https://files.pythonhosted.org/packages/0c/bd/11e957138342aef4b2539818d1c548fce634e7b323961cdd9beedba3879c/gimmemotifs-0.15.3.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.15.3 2023-09-12T10:44:58,193 Found link https://files.pythonhosted.org/packages/2b/71/faeeb7d734b4163500ad2e62fc131e66f912a722b7b9f6ad902f3ed62923/gimmemotifs-0.16.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.16.0 2023-09-12T10:44:58,194 Found link https://files.pythonhosted.org/packages/90/56/831b7548562dce57014d87dc9731c4b5ec0747c74ce2dd30966e2e812c5e/gimmemotifs-0.17.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.17.0 2023-09-12T10:44:58,194 Found link https://files.pythonhosted.org/packages/c5/c3/2dbd6363f025cf4b06d938479a9b35dab0ca91e59259b16e0bd6eef8bea0/gimmemotifs-0.17.2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.17.2 2023-09-12T10:44:58,195 Found link https://files.pythonhosted.org/packages/23/b1/31f5061ff2749292af7c70ec4f1c81afd1991ea4a2cb62c4e5235d3f1f1c/gimmemotifs-0.18.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.18.0 2023-09-12T10:44:58,196 Fetching project page and analyzing links: https://www.piwheels.org/simple/gimmemotifs/ 2023-09-12T10:44:58,197 Getting page https://www.piwheels.org/simple/gimmemotifs/ 2023-09-12T10:44:58,198 Found index url https://www.piwheels.org/simple/ 2023-09-12T10:44:58,451 Fetched page https://www.piwheels.org/simple/gimmemotifs/ as text/html 2023-09-12T10:44:58,474 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.18.0-cp39-cp39-linux_armv7l.whl#sha256=c12d64728ba85967129e8944ea53e685487283a4aa9d86599b1d0b154bfafd50 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,475 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.18.0-cp39-cp39-linux_armv6l.whl#sha256=c12d64728ba85967129e8944ea53e685487283a4aa9d86599b1d0b154bfafd50 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,476 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.18.0-cp37-cp37m-linux_armv7l.whl#sha256=35903bb52ba9b0b924163a78f5da57547ab61e653ae348938391849b6995de96 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,476 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.18.0-cp37-cp37m-linux_armv6l.whl#sha256=35903bb52ba9b0b924163a78f5da57547ab61e653ae348938391849b6995de96 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,477 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.17.2-cp39-cp39-linux_armv7l.whl#sha256=2830a249b0b24152246ade44a0c4b8410f5cb1284dc415a301331c92cc66cac5 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,478 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.17.2-cp39-cp39-linux_armv6l.whl#sha256=2830a249b0b24152246ade44a0c4b8410f5cb1284dc415a301331c92cc66cac5 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,478 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.17.2-cp37-cp37m-linux_armv7l.whl#sha256=d3ee204cf4cce000e45bd36d0f4b2c2ad56acaca7949242237d41320ab0b19d4 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,479 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.17.2-cp37-cp37m-linux_armv6l.whl#sha256=d3ee204cf4cce000e45bd36d0f4b2c2ad56acaca7949242237d41320ab0b19d4 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,479 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.17.0-cp39-cp39-linux_armv7l.whl#sha256=1839de9cf9404d7cf124991252941fa4a632733fc855deb6694f13ecf031fb86 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,480 Skipping link: No binaries permitted for gimmemotifs: 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https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.16.0-cp39-cp39-linux_armv7l.whl#sha256=3bbdd661a2a2499f4b6dae989a20ea228510bc8e1774f5e82c956f1d8bfd10af (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,482 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.16.0-cp39-cp39-linux_armv6l.whl#sha256=3bbdd661a2a2499f4b6dae989a20ea228510bc8e1774f5e82c956f1d8bfd10af (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,483 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.16.0-cp37-cp37m-linux_armv7l.whl#sha256=18abd284f2b2bb7dadd8fd8d04aee0ae6f6f487512248746b3105b27d3521e42 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,484 Skipping link: No binaries permitted for gimmemotifs: 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https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.1-cp35-cp35m-linux_armv6l.whl#sha256=dc8ee240ae1b6343c2f843b3be8746928cbc19ea325e772f320e13b4eb95c4ca (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,521 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.1-cp34-cp34m-linux_armv6l.whl#sha256=8bb0b78ec004de4a6e47b212b831b4762fdaae7ce5fae9c996a7b6bc8c95c1e3 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,522 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.1-cp34-cp34m-linux_armv7l.whl#sha256=8bb0b78ec004de4a6e47b212b831b4762fdaae7ce5fae9c996a7b6bc8c95c1e3 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,522 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp311-cp311-linux_armv7l.whl#sha256=d217b1e3151376436453faabdc0fd9d6f2bc09521f3abe74c7c175ca78d2045a (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,523 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp311-cp311-linux_armv6l.whl#sha256=d217b1e3151376436453faabdc0fd9d6f2bc09521f3abe74c7c175ca78d2045a (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,523 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp39-cp39-linux_armv7l.whl#sha256=4578af2cf7e0c8796980b9f5c87309d3bf6f25a3394eb569d4db3f99819fae86 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,524 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp39-cp39-linux_armv6l.whl#sha256=4578af2cf7e0c8796980b9f5c87309d3bf6f25a3394eb569d4db3f99819fae86 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,525 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp37-cp37m-linux_armv6l.whl#sha256=4fcf7c241d0be7c3cf6cbf538d027f79dff8c0e74de8dc43c9f2731b04cd5a6a (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,525 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp37-cp37m-linux_armv7l.whl#sha256=4fcf7c241d0be7c3cf6cbf538d027f79dff8c0e74de8dc43c9f2731b04cd5a6a (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,526 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp35-cp35m-linux_armv6l.whl#sha256=0c4940ef4ea69129a58fbbfdf350ea637b435f2f36e04ddfbc81dd3ac0057a01 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,526 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp35-cp35m-linux_armv7l.whl#sha256=0c4940ef4ea69129a58fbbfdf350ea637b435f2f36e04ddfbc81dd3ac0057a01 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-12T10:44:58,527 Skipping link: not a file: https://www.piwheels.org/simple/gimmemotifs/ 2023-09-12T10:44:58,527 Skipping link: not a file: https://pypi.org/simple/gimmemotifs/ 2023-09-12T10:44:58,548 Given no hashes to check 1 links for project 'gimmemotifs': discarding no candidates 2023-09-12T10:44:58,566 Collecting gimmemotifs==0.14.4 2023-09-12T10:44:58,568 Created temporary directory: /tmp/pip-unpack-hsuh17ij 2023-09-12T10:44:59,310 Downloading gimmemotifs-0.14.4.tar.gz (15.7 MB) 2023-09-12T10:45:04,756 Added gimmemotifs==0.14.4 from https://files.pythonhosted.org/packages/f6/71/681a72802e005601ad8da3b695ada4eea8e56e8bd1f14d42d4d7248a24a4/gimmemotifs-0.14.4.tar.gz to build tracker '/tmp/pip-build-tracker-bigu1g0o' 2023-09-12T10:45:04,757 Running setup.py (path:/tmp/pip-wheel-c__gy61i/gimmemotifs_927da8da0ca94c95a9da7d4f881d327a/setup.py) egg_info for package gimmemotifs 2023-09-12T10:45:04,758 Created temporary directory: /tmp/pip-pip-egg-info-ovvs0ya1 2023-09-12T10:45:04,759 Preparing metadata (setup.py): started 2023-09-12T10:45:04,760 Running command python setup.py egg_info 2023-09-12T10:45:05,881 running egg_info 2023-09-12T10:45:05,882 creating /tmp/pip-pip-egg-info-ovvs0ya1/gimmemotifs.egg-info 2023-09-12T10:45:05,906 writing /tmp/pip-pip-egg-info-ovvs0ya1/gimmemotifs.egg-info/PKG-INFO 2023-09-12T10:45:05,910 writing dependency_links to /tmp/pip-pip-egg-info-ovvs0ya1/gimmemotifs.egg-info/dependency_links.txt 2023-09-12T10:45:05,912 writing requirements to /tmp/pip-pip-egg-info-ovvs0ya1/gimmemotifs.egg-info/requires.txt 2023-09-12T10:45:05,913 writing top-level names to /tmp/pip-pip-egg-info-ovvs0ya1/gimmemotifs.egg-info/top_level.txt 2023-09-12T10:45:05,914 writing manifest file '/tmp/pip-pip-egg-info-ovvs0ya1/gimmemotifs.egg-info/SOURCES.txt' 2023-09-12T10:45:06,013 reading manifest file '/tmp/pip-pip-egg-info-ovvs0ya1/gimmemotifs.egg-info/SOURCES.txt' 2023-09-12T10:45:06,015 reading manifest template 'MANIFEST.in' 2023-09-12T10:45:06,016 warning: no files found matching 'run_tests.py' 2023-09-12T10:45:06,081 adding license file 'COPYING' 2023-09-12T10:45:06,091 writing manifest file '/tmp/pip-pip-egg-info-ovvs0ya1/gimmemotifs.egg-info/SOURCES.txt' 2023-09-12T10:45:06,199 Preparing metadata (setup.py): finished with status 'done' 2023-09-12T10:45:06,204 Source in /tmp/pip-wheel-c__gy61i/gimmemotifs_927da8da0ca94c95a9da7d4f881d327a has version 0.14.4, which satisfies requirement gimmemotifs==0.14.4 from https://files.pythonhosted.org/packages/f6/71/681a72802e005601ad8da3b695ada4eea8e56e8bd1f14d42d4d7248a24a4/gimmemotifs-0.14.4.tar.gz 2023-09-12T10:45:06,205 Removed gimmemotifs==0.14.4 from https://files.pythonhosted.org/packages/f6/71/681a72802e005601ad8da3b695ada4eea8e56e8bd1f14d42d4d7248a24a4/gimmemotifs-0.14.4.tar.gz from build tracker '/tmp/pip-build-tracker-bigu1g0o' 2023-09-12T10:45:06,210 Created temporary directory: /tmp/pip-unpack-t0uq2zic 2023-09-12T10:45:06,211 Created temporary directory: /tmp/pip-unpack-ohahhpka 2023-09-12T10:45:06,242 Building wheels for collected packages: gimmemotifs 2023-09-12T10:45:06,246 Created temporary directory: /tmp/pip-wheel-yw96l82b 2023-09-12T10:45:06,246 Building wheel for gimmemotifs (setup.py): started 2023-09-12T10:45:06,248 Destination directory: /tmp/pip-wheel-yw96l82b 2023-09-12T10:45:06,248 Running command python setup.py bdist_wheel 2023-09-12T10:45:07,280 running bdist_wheel 2023-09-12T10:45:07,371 running build 2023-09-12T10:45:07,371 running build_py 2023-09-12T10:45:07,372 creating build 2023-09-12T10:45:07,373 creating build/src 2023-09-12T10:45:07,374 creating build/src/ChIPMunk 2023-09-12T10:45:07,375 copying src/ChIPMunk/ChIPMunk.sh -> build/src/ChIPMunk 2023-09-12T10:45:07,376 copying src/ChIPMunk/chipmunk.jar -> build/src/ChIPMunk 2023-09-12T10:45:07,450 creating build/src/Improbizer 2023-09-12T10:45:07,451 copying src/Improbizer/ameme_x86_64 -> build/src/Improbizer 2023-09-12T10:45:07,459 copying src/Improbizer/ameme_i386 -> build/src/Improbizer 2023-09-12T10:45:07,467 creating build/src/AMD 2023-09-12T10:45:07,468 copying src/AMD/AMD.bin -> build/src/AMD 2023-09-12T10:45:07,472 copying src/README -> build/src 2023-09-12T10:45:07,475 creating build/src/MDmodule 2023-09-12T10:45:07,476 copying src/MDmodule/MDmodule -> build/src/MDmodule 2023-09-12T10:45:07,480 copying src/MDmodule/MDmodule.c -> build/src/MDmodule 2023-09-12T10:45:07,484 copying src/MDmodule/COPYING -> build/src/MDmodule 2023-09-12T10:45:07,486 creating build/src/posmo 2023-09-12T10:45:07,486 copying src/posmo/posmo -> build/src/posmo 2023-09-12T10:45:07,489 copying src/posmo/clusterwd -> build/src/posmo 2023-09-12T10:45:07,493 creating build/src/HMS 2023-09-12T10:45:07,493 copying src/HMS/theta3.txt -> build/src/HMS 2023-09-12T10:45:07,495 copying src/HMS/theta0.txt -> build/src/HMS 2023-09-12T10:45:07,497 copying src/HMS/theta1.txt -> build/src/HMS 2023-09-12T10:45:07,498 copying src/HMS/theta2.txt -> build/src/HMS 2023-09-12T10:45:07,500 copying src/HMS/hms -> build/src/HMS 2023-09-12T10:45:07,504 creating build/src/MotifSampler 2023-09-12T10:45:07,504 copying src/MotifSampler/MotifSampler_i386 -> build/src/MotifSampler 2023-09-12T10:45:07,525 copying src/MotifSampler/CreateBackgroundModel_i386 -> build/src/MotifSampler 2023-09-12T10:45:07,543 copying src/MotifSampler/CreateBackgroundModel_x86_64 -> build/src/MotifSampler 2023-09-12T10:45:07,570 copying src/MotifSampler/MotifSampler_x86_64 -> build/src/MotifSampler 2023-09-12T10:45:07,597 copying src/COPYING -> build/src 2023-09-12T10:45:07,599 creating build/src/BioProspector 2023-09-12T10:45:07,600 copying src/BioProspector/BioProspector.c -> build/src/BioProspector 2023-09-12T10:45:07,604 copying src/BioProspector/COPYING -> build/src/BioProspector 2023-09-12T10:45:07,605 copying src/BioProspector/BioProspector -> build/src/BioProspector 2023-09-12T10:45:07,609 creating build/lib.linux-armv7l-cpython-311 2023-09-12T10:45:07,609 creating build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:07,610 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-12T10:45:08,397 compiling BioProspector... ok 2023-09-12T10:45:09,176 compiling MDmodule... ok 2023-09-12T10:45:09,177 copying src/MDmodule/MDmodule -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-12T10:45:09,180 copying build/src/MDmodule/MDmodule -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-12T10:45:09,184 copying src/BioProspector/BioProspector -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-12T10:45:09,187 copying build/src/BioProspector/BioProspector -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-12T10:45:09,190 copying src/posmo/posmo -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-12T10:45:09,193 copying src/posmo/clusterwd -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-12T10:45:09,196 copying src/AMD/AMD.bin -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-12T10:45:09,200 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ChIPMunk 2023-09-12T10:45:09,201 copying build/src/ChIPMunk/ChIPMunk.sh -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ChIPMunk 2023-09-12T10:45:09,203 copying build/src/ChIPMunk/chipmunk.jar -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ChIPMunk 2023-09-12T10:45:09,288 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS 2023-09-12T10:45:09,289 copying build/src/HMS/theta3.txt -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS 2023-09-12T10:45:09,291 copying build/src/HMS/theta0.txt -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS 2023-09-12T10:45:09,293 copying build/src/HMS/theta1.txt -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS 2023-09-12T10:45:09,294 copying build/src/HMS/theta2.txt -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS 2023-09-12T10:45:09,296 copying build/src/HMS/hms -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS 2023-09-12T10:45:09,300 copying build/src/MotifSampler/MotifSampler_x86_64 -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/MotifSampler 2023-09-12T10:45:09,326 copying build/src/MotifSampler/CreateBackgroundModel_x86_64 -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/CreateBackgroundModel 2023-09-12T10:45:09,351 copying build/src/Improbizer/ameme_x86_64 -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ameme 2023-09-12T10:45:09,364 creating build/lib.linux-armv7l-cpython-311/data 2023-09-12T10:45:09,365 copying data/__init__.py -> build/lib.linux-armv7l-cpython-311/data 2023-09-12T10:45:09,368 copying gimmemotifs/validation.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,370 copying gimmemotifs/config.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,372 copying gimmemotifs/background.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,375 copying gimmemotifs/cli.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,377 copying gimmemotifs/shutils.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,379 copying gimmemotifs/plot.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,382 copying gimmemotifs/comparison.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,385 copying gimmemotifs/stats.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,387 copying gimmemotifs/cluster.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,390 copying gimmemotifs/utils.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,392 copying gimmemotifs/scanner.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,395 copying gimmemotifs/_version.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,397 copying gimmemotifs/fasta.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,399 copying gimmemotifs/motif.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,402 copying gimmemotifs/denovo.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,404 copying gimmemotifs/moap.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,407 copying gimmemotifs/__init__.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,409 copying gimmemotifs/rank.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,411 copying gimmemotifs/prediction.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,414 copying gimmemotifs/maelstrom.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,417 copying gimmemotifs/rocmetrics.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,420 copying gimmemotifs/report.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:09,424 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,425 copying gimmemotifs/tools/posmo.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,427 copying gimmemotifs/tools/motifsampler.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,430 copying gimmemotifs/tools/improbizer.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,432 copying gimmemotifs/tools/hms.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,434 copying gimmemotifs/tools/bioprospector.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,436 copying gimmemotifs/tools/memew.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,439 copying gimmemotifs/tools/gadem.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,441 copying gimmemotifs/tools/homer.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,443 copying gimmemotifs/tools/motifprogram.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,446 copying gimmemotifs/tools/dreme.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,448 copying gimmemotifs/tools/jaspar.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,450 copying gimmemotifs/tools/amd.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,452 copying gimmemotifs/tools/dinamo.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,454 copying gimmemotifs/tools/xxmotif.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,456 copying gimmemotifs/tools/weeder.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,458 copying gimmemotifs/tools/prosampler.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,461 copying gimmemotifs/tools/meme.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,463 copying gimmemotifs/tools/rpmcmc.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,465 copying gimmemotifs/tools/__init__.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,467 copying gimmemotifs/tools/trawler.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,470 copying gimmemotifs/tools/chipmunk.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,472 copying gimmemotifs/tools/mdmodule.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,474 copying gimmemotifs/tools/yamda.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-12T10:45:09,477 copying gimmemotifs/included_tools/__init__.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-12T10:45:09,480 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-12T10:45:09,481 copying gimmemotifs/commands/diff.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-12T10:45:09,483 copying gimmemotifs/commands/background.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-12T10:45:09,485 copying gimmemotifs/commands/match.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-12T10:45:09,486 copying gimmemotifs/commands/cluster.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-12T10:45:09,488 copying gimmemotifs/commands/motifs.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-12T10:45:09,490 copying gimmemotifs/commands/threshold.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-12T10:45:09,492 copying gimmemotifs/commands/location.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-12T10:45:09,494 copying gimmemotifs/commands/pfmscan.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-12T10:45:09,495 copying gimmemotifs/commands/logo.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-12T10:45:09,497 copying gimmemotifs/commands/__init__.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-12T10:45:09,498 copying gimmemotifs/commands/prediction.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-12T10:45:09,500 copying gimmemotifs/commands/maelstrom.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-12T10:45:09,502 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/db 2023-09-12T10:45:09,503 copying gimmemotifs/db/__init__.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/db 2023-09-12T10:45:09,505 running egg_info 2023-09-12T10:45:09,559 writing gimmemotifs.egg-info/PKG-INFO 2023-09-12T10:45:09,562 writing dependency_links to gimmemotifs.egg-info/dependency_links.txt 2023-09-12T10:45:09,564 writing requirements to gimmemotifs.egg-info/requires.txt 2023-09-12T10:45:09,565 writing top-level names to gimmemotifs.egg-info/top_level.txt 2023-09-12T10:45:09,598 reading manifest file 'gimmemotifs.egg-info/SOURCES.txt' 2023-09-12T10:45:09,624 reading manifest template 'MANIFEST.in' 2023-09-12T10:45:09,625 warning: no files found matching 'run_tests.py' 2023-09-12T10:45:09,683 adding license file 'COPYING' 2023-09-12T10:45:09,696 writing manifest file 'gimmemotifs.egg-info/SOURCES.txt' 2023-09-12T10:45:09,699 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.bg' is absent from the `packages` configuration. 2023-09-12T10:45:09,699 !! 2023-09-12T10:45:09,701 ******************************************************************************** 2023-09-12T10:45:09,701 ############################ 2023-09-12T10:45:09,702 # Package would be ignored # 2023-09-12T10:45:09,703 ############################ 2023-09-12T10:45:09,703 Python recognizes 'data.bg' as an importable package[^1], 2023-09-12T10:45:09,704 but it is absent from setuptools' `packages` configuration. 2023-09-12T10:45:09,705 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-12T10:45:09,706 package, please make sure that 'data.bg' is explicitly added 2023-09-12T10:45:09,706 to the `packages` configuration field. 2023-09-12T10:45:09,707 Alternatively, you can also rely on setuptools' discovery methods 2023-09-12T10:45:09,708 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-12T10:45:09,708 instead of `find_packages(...)`/`find:`). 2023-09-12T10:45:09,709 You can read more about "package discovery" on setuptools documentation page: 2023-09-12T10:45:09,710 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-12T10:45:09,711 If you don't want 'data.bg' to be distributed and are 2023-09-12T10:45:09,712 already explicitly excluding 'data.bg' via 2023-09-12T10:45:09,712 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-12T10:45:09,713 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-12T10:45:09,714 combination with a more fine grained `package-data` configuration. 2023-09-12T10:45:09,715 You can read more about "package data files" on setuptools documentation page: 2023-09-12T10:45:09,716 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-12T10:45:09,717 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-12T10:45:09,718 even if it does not contain any `.py` files. 2023-09-12T10:45:09,718 On the other hand, currently there is no concept of package data 2023-09-12T10:45:09,719 directory, all directories are treated like packages. 2023-09-12T10:45:09,719 ******************************************************************************** 2023-09-12T10:45:09,720 !! 2023-09-12T10:45:09,721 check.warn(importable) 2023-09-12T10:45:09,721 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.cfg' is absent from the `packages` configuration. 2023-09-12T10:45:09,721 !! 2023-09-12T10:45:09,723 ******************************************************************************** 2023-09-12T10:45:09,723 ############################ 2023-09-12T10:45:09,723 # Package would be ignored # 2023-09-12T10:45:09,724 ############################ 2023-09-12T10:45:09,724 Python recognizes 'data.cfg' as an importable package[^1], 2023-09-12T10:45:09,725 but it is absent from setuptools' `packages` configuration. 2023-09-12T10:45:09,726 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-12T10:45:09,726 package, please make sure that 'data.cfg' is explicitly added 2023-09-12T10:45:09,727 to the `packages` configuration field. 2023-09-12T10:45:09,728 Alternatively, you can also rely on setuptools' discovery methods 2023-09-12T10:45:09,728 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-12T10:45:09,729 instead of `find_packages(...)`/`find:`). 2023-09-12T10:45:09,730 You can read more about "package discovery" on setuptools documentation page: 2023-09-12T10:45:09,731 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-12T10:45:09,732 If you don't want 'data.cfg' to be distributed and are 2023-09-12T10:45:09,732 already explicitly excluding 'data.cfg' via 2023-09-12T10:45:09,733 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-12T10:45:09,733 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-12T10:45:09,735 combination with a more fine grained `package-data` configuration. 2023-09-12T10:45:09,736 You can read more about "package data files" on setuptools documentation page: 2023-09-12T10:45:09,737 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-12T10:45:09,739 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-12T10:45:09,740 even if it does not contain any `.py` files. 2023-09-12T10:45:09,741 On the other hand, currently there is no concept of package data 2023-09-12T10:45:09,741 directory, all directories are treated like packages. 2023-09-12T10:45:09,742 ******************************************************************************** 2023-09-12T10:45:09,743 !! 2023-09-12T10:45:09,743 check.warn(importable) 2023-09-12T10:45:09,745 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.examples' is absent from the `packages` configuration. 2023-09-12T10:45:09,746 !! 2023-09-12T10:45:09,747 ******************************************************************************** 2023-09-12T10:45:09,748 ############################ 2023-09-12T10:45:09,748 # Package would be ignored # 2023-09-12T10:45:09,749 ############################ 2023-09-12T10:45:09,750 Python recognizes 'data.examples' as an importable package[^1], 2023-09-12T10:45:09,750 but it is absent from setuptools' `packages` configuration. 2023-09-12T10:45:09,752 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-12T10:45:09,752 package, please make sure that 'data.examples' is explicitly added 2023-09-12T10:45:09,753 to the `packages` configuration field. 2023-09-12T10:45:09,753 Alternatively, you can also rely on setuptools' discovery methods 2023-09-12T10:45:09,754 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-12T10:45:09,754 instead of `find_packages(...)`/`find:`). 2023-09-12T10:45:09,755 You can read more about "package discovery" on setuptools documentation page: 2023-09-12T10:45:09,756 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-12T10:45:09,757 If you don't want 'data.examples' to be distributed and are 2023-09-12T10:45:09,758 already explicitly excluding 'data.examples' via 2023-09-12T10:45:09,758 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-12T10:45:09,760 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-12T10:45:09,766 combination with a more fine grained `package-data` configuration. 2023-09-12T10:45:09,769 You can read more about "package data files" on setuptools documentation page: 2023-09-12T10:45:09,770 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-12T10:45:09,772 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-12T10:45:09,780 even if it does not contain any `.py` files. 2023-09-12T10:45:09,780 On the other hand, currently there is no concept of package data 2023-09-12T10:45:09,781 directory, all directories are treated like packages. 2023-09-12T10:45:09,782 ******************************************************************************** 2023-09-12T10:45:09,783 !! 2023-09-12T10:45:09,783 check.warn(importable) 2023-09-12T10:45:09,784 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.motif_databases' is absent from the `packages` configuration. 2023-09-12T10:45:09,784 !! 2023-09-12T10:45:09,786 ******************************************************************************** 2023-09-12T10:45:09,789 ############################ 2023-09-12T10:45:09,795 # Package would be ignored # 2023-09-12T10:45:09,801 ############################ 2023-09-12T10:45:09,807 Python recognizes 'data.motif_databases' as an importable package[^1], 2023-09-12T10:45:09,815 but it is absent from setuptools' `packages` configuration. 2023-09-12T10:45:09,822 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-12T10:45:09,823 package, please make sure that 'data.motif_databases' is explicitly added 2023-09-12T10:45:09,824 to the `packages` configuration field. 2023-09-12T10:45:09,826 Alternatively, you can also rely on setuptools' discovery methods 2023-09-12T10:45:09,827 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-12T10:45:09,827 instead of `find_packages(...)`/`find:`). 2023-09-12T10:45:09,829 You can read more about "package discovery" on setuptools documentation page: 2023-09-12T10:45:09,830 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-12T10:45:09,831 If you don't want 'data.motif_databases' to be distributed and are 2023-09-12T10:45:09,832 already explicitly excluding 'data.motif_databases' via 2023-09-12T10:45:09,833 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-12T10:45:09,833 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-12T10:45:09,834 combination with a more fine grained `package-data` configuration. 2023-09-12T10:45:09,837 You can read more about "package data files" on setuptools documentation page: 2023-09-12T10:45:09,840 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-12T10:45:09,848 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-12T10:45:09,849 even if it does not contain any `.py` files. 2023-09-12T10:45:09,850 On the other hand, currently there is no concept of package data 2023-09-12T10:45:09,850 directory, all directories are treated like packages. 2023-09-12T10:45:09,851 ******************************************************************************** 2023-09-12T10:45:09,852 !! 2023-09-12T10:45:09,852 check.warn(importable) 2023-09-12T10:45:09,853 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.score_dists' is absent from the `packages` configuration. 2023-09-12T10:45:09,853 !! 2023-09-12T10:45:09,854 ******************************************************************************** 2023-09-12T10:45:09,855 ############################ 2023-09-12T10:45:09,857 # Package would be ignored # 2023-09-12T10:45:09,858 ############################ 2023-09-12T10:45:09,861 Python recognizes 'data.score_dists' as an importable package[^1], 2023-09-12T10:45:09,861 but it is absent from setuptools' `packages` configuration. 2023-09-12T10:45:09,864 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-12T10:45:09,864 package, please make sure that 'data.score_dists' is explicitly added 2023-09-12T10:45:09,865 to the `packages` configuration field. 2023-09-12T10:45:09,866 Alternatively, you can also rely on setuptools' discovery methods 2023-09-12T10:45:09,866 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-12T10:45:09,867 instead of `find_packages(...)`/`find:`). 2023-09-12T10:45:09,868 You can read more about "package discovery" on setuptools documentation page: 2023-09-12T10:45:09,869 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-12T10:45:09,870 If you don't want 'data.score_dists' to be distributed and are 2023-09-12T10:45:09,870 already explicitly excluding 'data.score_dists' via 2023-09-12T10:45:09,871 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-12T10:45:09,873 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-12T10:45:09,874 combination with a more fine grained `package-data` configuration. 2023-09-12T10:45:09,876 You can read more about "package data files" on setuptools documentation page: 2023-09-12T10:45:09,877 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-12T10:45:09,878 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-12T10:45:09,879 even if it does not contain any `.py` files. 2023-09-12T10:45:09,879 On the other hand, currently there is no concept of package data 2023-09-12T10:45:09,880 directory, all directories are treated like packages. 2023-09-12T10:45:09,880 ******************************************************************************** 2023-09-12T10:45:09,882 !! 2023-09-12T10:45:09,882 check.warn(importable) 2023-09-12T10:45:09,883 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.templates' is absent from the `packages` configuration. 2023-09-12T10:45:09,885 !! 2023-09-12T10:45:09,888 ******************************************************************************** 2023-09-12T10:45:09,889 ############################ 2023-09-12T10:45:09,889 # Package would be ignored # 2023-09-12T10:45:09,890 ############################ 2023-09-12T10:45:09,890 Python recognizes 'data.templates' as an importable package[^1], 2023-09-12T10:45:09,891 but it is absent from setuptools' `packages` configuration. 2023-09-12T10:45:09,892 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-12T10:45:09,892 package, please make sure that 'data.templates' is explicitly added 2023-09-12T10:45:09,893 to the `packages` configuration field. 2023-09-12T10:45:09,894 Alternatively, you can also rely on setuptools' discovery methods 2023-09-12T10:45:09,896 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-12T10:45:09,899 instead of `find_packages(...)`/`find:`). 2023-09-12T10:45:09,901 You can read more about "package discovery" on setuptools documentation page: 2023-09-12T10:45:09,902 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-12T10:45:09,904 If you don't want 'data.templates' to be distributed and are 2023-09-12T10:45:09,905 already explicitly excluding 'data.templates' via 2023-09-12T10:45:09,906 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-12T10:45:09,908 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-12T10:45:09,908 combination with a more fine grained `package-data` configuration. 2023-09-12T10:45:09,910 You can read more about "package data files" on setuptools documentation page: 2023-09-12T10:45:09,912 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-12T10:45:09,914 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-12T10:45:09,914 even if it does not contain any `.py` files. 2023-09-12T10:45:09,920 On the other hand, currently there is no concept of package data 2023-09-12T10:45:09,923 directory, all directories are treated like packages. 2023-09-12T10:45:09,925 ******************************************************************************** 2023-09-12T10:45:09,927 !! 2023-09-12T10:45:09,928 check.warn(importable) 2023-09-12T10:45:09,928 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.templates.sortable' is absent from the `packages` configuration. 2023-09-12T10:45:09,929 !! 2023-09-12T10:45:09,930 ******************************************************************************** 2023-09-12T10:45:09,930 ############################ 2023-09-12T10:45:09,931 # Package would be ignored # 2023-09-12T10:45:09,931 ############################ 2023-09-12T10:45:09,932 Python recognizes 'data.templates.sortable' as an importable package[^1], 2023-09-12T10:45:09,932 but it is absent from setuptools' `packages` configuration. 2023-09-12T10:45:09,933 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-12T10:45:09,934 package, please make sure that 'data.templates.sortable' is explicitly added 2023-09-12T10:45:09,934 to the `packages` configuration field. 2023-09-12T10:45:09,936 Alternatively, you can also rely on setuptools' discovery methods 2023-09-12T10:45:09,936 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-12T10:45:09,937 instead of `find_packages(...)`/`find:`). 2023-09-12T10:45:09,938 You can read more about "package discovery" on setuptools documentation page: 2023-09-12T10:45:09,939 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-12T10:45:09,940 If you don't want 'data.templates.sortable' to be distributed and are 2023-09-12T10:45:09,941 already explicitly excluding 'data.templates.sortable' via 2023-09-12T10:45:09,942 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-12T10:45:09,942 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-12T10:45:09,943 combination with a more fine grained `package-data` configuration. 2023-09-12T10:45:09,944 You can read more about "package data files" on setuptools documentation page: 2023-09-12T10:45:09,945 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-12T10:45:09,947 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-12T10:45:09,947 even if it does not contain any `.py` files. 2023-09-12T10:45:09,948 On the other hand, currently there is no concept of package data 2023-09-12T10:45:09,948 directory, all directories are treated like packages. 2023-09-12T10:45:09,948 ******************************************************************************** 2023-09-12T10:45:09,949 !! 2023-09-12T10:45:09,950 check.warn(importable) 2023-09-12T10:45:09,950 creating build/lib.linux-armv7l-cpython-311/data/bg 2023-09-12T10:45:09,950 copying data/bg/hg18.MotifSampler.bg -> build/lib.linux-armv7l-cpython-311/data/bg 2023-09-12T10:45:09,951 copying data/bg/hg19.MotifSampler.bg -> build/lib.linux-armv7l-cpython-311/data/bg 2023-09-12T10:45:09,951 copying data/bg/hg38.MotifSampler.bg -> build/lib.linux-armv7l-cpython-311/data/bg 2023-09-12T10:45:09,952 copying data/bg/mm10.MotifSampler.bg -> build/lib.linux-armv7l-cpython-311/data/bg 2023-09-12T10:45:09,952 copying data/bg/mm9.MotifSampler.bg -> build/lib.linux-armv7l-cpython-311/data/bg 2023-09-12T10:45:09,953 copying data/bg/xenTro2.MotifSampler.bg -> build/lib.linux-armv7l-cpython-311/data/bg 2023-09-12T10:45:09,954 creating build/lib.linux-armv7l-cpython-311/data/cfg 2023-09-12T10:45:09,954 copying data/cfg/gimmemotifs.default.cfg -> build/lib.linux-armv7l-cpython-311/data/cfg 2023-09-12T10:45:09,955 creating build/lib.linux-armv7l-cpython-311/data/examples 2023-09-12T10:45:09,956 copying data/examples/Gm12878.CTCF.top500.w200.fa -> build/lib.linux-armv7l-cpython-311/data/examples 2023-09-12T10:45:09,956 copying data/examples/MA0099.3.jaspar -> build/lib.linux-armv7l-cpython-311/data/examples 2023-09-12T10:45:09,957 copying data/examples/TAp73alpha.bed -> build/lib.linux-armv7l-cpython-311/data/examples 2023-09-12T10:45:09,957 copying data/examples/TAp73alpha.fa -> build/lib.linux-armv7l-cpython-311/data/examples 2023-09-12T10:45:09,958 copying data/examples/example.pfm -> build/lib.linux-armv7l-cpython-311/data/examples 2023-09-12T10:45:09,959 copying data/examples/test.small.fa -> build/lib.linux-armv7l-cpython-311/data/examples 2023-09-12T10:45:09,959 creating build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,960 copying data/motif_databases/CIS-BP.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,961 copying data/motif_databases/CIS-BP.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,961 copying data/motif_databases/ENCODE.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,962 copying data/motif_databases/ENCODE.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,963 copying data/motif_databases/HOCOMOCOv10_HUMAN.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,963 copying data/motif_databases/HOCOMOCOv10_HUMAN.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,964 copying data/motif_databases/HOCOMOCOv10_MOUSE.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,965 copying data/motif_databases/HOCOMOCOv10_MOUSE.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,965 copying data/motif_databases/HOCOMOCOv11_HUMAN.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,966 copying data/motif_databases/HOCOMOCOv11_HUMAN.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,967 copying data/motif_databases/HOCOMOCOv11_MOUSE.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,967 copying data/motif_databases/HOCOMOCOv11_MOUSE.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,968 copying data/motif_databases/HOMER.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,968 copying data/motif_databases/HOMER.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,969 copying data/motif_databases/IMAGE.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,970 copying data/motif_databases/IMAGE.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,970 copying data/motif_databases/JASPAR2018.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,971 copying data/motif_databases/JASPAR2018.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,971 copying data/motif_databases/JASPAR2018_fungi.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,972 copying data/motif_databases/JASPAR2018_fungi.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,972 copying data/motif_databases/JASPAR2018_insects.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,973 copying data/motif_databases/JASPAR2018_insects.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,974 copying data/motif_databases/JASPAR2018_nematodes.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,974 copying data/motif_databases/JASPAR2018_nematodes.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,975 copying data/motif_databases/JASPAR2018_plants.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,976 copying data/motif_databases/JASPAR2018_plants.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,984 copying data/motif_databases/JASPAR2018_urochordates.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,987 copying data/motif_databases/JASPAR2018_urochordates.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,989 copying data/motif_databases/JASPAR2018_vertebrates.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:09,992 copying data/motif_databases/JASPAR2018_vertebrates.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,001 copying data/motif_databases/JASPAR2020.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,005 copying data/motif_databases/JASPAR2020.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,042 copying data/motif_databases/JASPAR2020_fungi.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,045 copying data/motif_databases/JASPAR2020_fungi.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,050 copying data/motif_databases/JASPAR2020_insects.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,053 copying data/motif_databases/JASPAR2020_insects.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,056 copying data/motif_databases/JASPAR2020_nematodes.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,059 copying data/motif_databases/JASPAR2020_nematodes.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,062 copying data/motif_databases/JASPAR2020_plants.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,065 copying data/motif_databases/JASPAR2020_plants.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,071 copying data/motif_databases/JASPAR2020_urochordates.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,073 copying data/motif_databases/JASPAR2020_urochordates.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,075 copying data/motif_databases/JASPAR2020_vertebrates.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,078 copying data/motif_databases/JASPAR2020_vertebrates.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,085 copying data/motif_databases/RSAT_insects.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,087 copying data/motif_databases/RSAT_insects.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,092 copying data/motif_databases/RSAT_plants.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,094 copying data/motif_databases/RSAT_plants.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,098 copying data/motif_databases/RSAT_vertebrates.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,100 copying data/motif_databases/RSAT_vertebrates.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,115 copying data/motif_databases/SwissRegulon.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,118 copying data/motif_databases/SwissRegulon.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,125 copying data/motif_databases/factorbook.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,127 copying data/motif_databases/factorbook.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,136 copying data/motif_databases/gimme.invertebrate.v1.0.pwm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,141 copying data/motif_databases/gimme.plant.v1.0.pwm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,146 copying data/motif_databases/gimme.vertebrate.v3.1.factor2motifs.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,150 copying data/motif_databases/gimme.vertebrate.v3.1.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,153 copying data/motif_databases/gimme.vertebrate.v3.1.pwm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,164 copying data/motif_databases/gimme.vertebrate.v5.0.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,173 copying data/motif_databases/gimme.vertebrate.v5.0.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-12T10:45:10,194 creating build/lib.linux-armv7l-cpython-311/data/score_dists 2023-09-12T10:45:10,195 copying data/score_dists/dic2_bg_mean_sd.txt -> build/lib.linux-armv7l-cpython-311/data/score_dists 2023-09-12T10:45:10,198 copying data/score_dists/dic2_mean_sd.txt -> build/lib.linux-armv7l-cpython-311/data/score_dists 2023-09-12T10:45:10,200 copying data/score_dists/total_wic_mean_score_dist.txt -> build/lib.linux-armv7l-cpython-311/data/score_dists 2023-09-12T10:45:10,203 creating build/lib.linux-armv7l-cpython-311/data/templates 2023-09-12T10:45:10,205 copying data/templates/cluster_template.jinja.html -> build/lib.linux-armv7l-cpython-311/data/templates 2023-09-12T10:45:10,207 copying data/templates/report_template.jinja.html -> build/lib.linux-armv7l-cpython-311/data/templates 2023-09-12T10:45:10,210 copying data/templates/star.png -> build/lib.linux-armv7l-cpython-311/data/templates 2023-09-12T10:45:10,213 copying data/templates/star_silver.png -> build/lib.linux-armv7l-cpython-311/data/templates 2023-09-12T10:45:10,216 creating build/lib.linux-armv7l-cpython-311/data/templates/sortable 2023-09-12T10:45:10,217 copying data/templates/sortable/sortable-theme-slick.css -> build/lib.linux-armv7l-cpython-311/data/templates/sortable 2023-09-12T10:45:10,219 copying data/templates/sortable/sortable.min.js -> build/lib.linux-armv7l-cpython-311/data/templates/sortable 2023-09-12T10:45:10,221 copying gimmemotifs/c_metrics.c -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:10,228 UPDATING build/lib.linux-armv7l-cpython-311/gimmemotifs/_version.py 2023-09-12T10:45:10,230 set build/lib.linux-armv7l-cpython-311/gimmemotifs/_version.py to '0.14.4' 2023-09-12T10:45:10,230 running build_ext 2023-09-12T10:45:10,739 building 'gimmemotifs.c_metrics' extension 2023-09-12T10:45:10,739 creating build/temp.linux-armv7l-cpython-311 2023-09-12T10:45:10,740 creating build/temp.linux-armv7l-cpython-311/gimmemotifs 2023-09-12T10:45:10,741 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c gimmemotifs/c_metrics.c -o build/temp.linux-armv7l-cpython-311/gimmemotifs/c_metrics.o 2023-09-12T10:45:11,099 gimmemotifs/c_metrics.c: In function ‘get_truncate_len’: 2023-09-12T10:45:11,100 gimmemotifs/c_metrics.c:285:5: warning: type of ‘len1’ defaults to ‘int’ [-Wimplicit-int] 2023-09-12T10:45:11,100 285 | int get_truncate_len(len1, len2, pos) { 2023-09-12T10:45:11,101 | ^~~~~~~~~~~~~~~~ 2023-09-12T10:45:11,102 gimmemotifs/c_metrics.c:285:5: warning: type of ‘len2’ defaults to ‘int’ [-Wimplicit-int] 2023-09-12T10:45:11,102 gimmemotifs/c_metrics.c:285:5: warning: type of ‘pos’ defaults to ‘int’ [-Wimplicit-int] 2023-09-12T10:45:11,111 gimmemotifs/c_metrics.c: At top level: 2023-09-12T10:45:11,112 gimmemotifs/c_metrics.c:864:22: warning: initialization of ‘int’ from ‘void *’ makes integer from pointer without a cast [-Wint-conversion] 2023-09-12T10:45:11,112 864 | {NULL, NULL, NULL, 0, NULL} 2023-09-12T10:45:11,113 | ^~~~ 2023-09-12T10:45:11,115 gimmemotifs/c_metrics.c:864:22: note: (near initialization for ‘CoreMethods[4].ml_flags’) 2023-09-12T10:45:11,116 gimmemotifs/c_metrics.c:864:31: warning: excess elements in struct initializer 2023-09-12T10:45:11,117 864 | {NULL, NULL, NULL, 0, NULL} 2023-09-12T10:45:11,118 | ^~~~ 2023-09-12T10:45:11,118 gimmemotifs/c_metrics.c:864:31: note: (near initialization for ‘CoreMethods[4]’) 2023-09-12T10:45:12,401 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/gimmemotifs/c_metrics.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/gimmemotifs/c_metrics.cpython-311-arm-linux-gnueabihf.so 2023-09-12T10:45:12,493 running build_scripts 2023-09-12T10:45:12,493 creating build/scripts-3.11 2023-09-12T10:45:12,494 copying and adjusting scripts/gimme -> build/scripts-3.11 2023-09-12T10:45:12,496 copying and adjusting scripts/combine_peaks -> build/scripts-3.11 2023-09-12T10:45:12,499 copying and adjusting scripts/coverage_table -> build/scripts-3.11 2023-09-12T10:45:12,500 changing mode of build/scripts-3.11/gimme from 644 to 755 2023-09-12T10:45:12,501 changing mode of build/scripts-3.11/combine_peaks from 644 to 755 2023-09-12T10:45:12,501 changing mode of build/scripts-3.11/coverage_table from 644 to 755 2023-09-12T10:45:12,526 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-09-12T10:45:12,526 !! 2023-09-12T10:45:12,528 ******************************************************************************** 2023-09-12T10:45:12,528 Please avoid running ``setup.py`` directly. 2023-09-12T10:45:12,529 Instead, use pypa/build, pypa/installer or other 2023-09-12T10:45:12,529 standards-based tools. 2023-09-12T10:45:12,530 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-09-12T10:45:12,530 ******************************************************************************** 2023-09-12T10:45:12,531 !! 2023-09-12T10:45:12,532 self.initialize_options() 2023-09-12T10:45:12,553 installing to build/bdist.linux-armv7l/wheel 2023-09-12T10:45:12,554 running install 2023-09-12T10:45:12,578 running install_lib 2023-09-12T10:45:12,602 creating build/bdist.linux-armv7l 2023-09-12T10:45:12,603 creating build/bdist.linux-armv7l/wheel 2023-09-12T10:45:12,605 creating build/bdist.linux-armv7l/wheel/data 2023-09-12T10:45:12,606 creating build/bdist.linux-armv7l/wheel/data/score_dists 2023-09-12T10:45:12,607 copying build/lib.linux-armv7l-cpython-311/data/score_dists/dic2_bg_mean_sd.txt -> build/bdist.linux-armv7l/wheel/data/score_dists 2023-09-12T10:45:12,610 copying build/lib.linux-armv7l-cpython-311/data/score_dists/dic2_mean_sd.txt -> build/bdist.linux-armv7l/wheel/data/score_dists 2023-09-12T10:45:12,612 copying build/lib.linux-armv7l-cpython-311/data/score_dists/total_wic_mean_score_dist.txt -> build/bdist.linux-armv7l/wheel/data/score_dists 2023-09-12T10:45:12,615 creating build/bdist.linux-armv7l/wheel/data/bg 2023-09-12T10:45:12,616 copying build/lib.linux-armv7l-cpython-311/data/bg/mm10.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-09-12T10:45:12,619 copying build/lib.linux-armv7l-cpython-311/data/bg/hg18.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-09-12T10:45:12,621 copying build/lib.linux-armv7l-cpython-311/data/bg/hg38.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-09-12T10:45:12,623 copying build/lib.linux-armv7l-cpython-311/data/bg/hg19.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-09-12T10:45:12,625 copying build/lib.linux-armv7l-cpython-311/data/bg/xenTro2.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-09-12T10:45:12,628 copying build/lib.linux-armv7l-cpython-311/data/bg/mm9.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-09-12T10:45:12,630 creating build/bdist.linux-armv7l/wheel/data/examples 2023-09-12T10:45:12,631 copying build/lib.linux-armv7l-cpython-311/data/examples/example.pfm -> build/bdist.linux-armv7l/wheel/data/examples 2023-09-12T10:45:12,633 copying build/lib.linux-armv7l-cpython-311/data/examples/TAp73alpha.bed -> build/bdist.linux-armv7l/wheel/data/examples 2023-09-12T10:45:12,636 copying build/lib.linux-armv7l-cpython-311/data/examples/test.small.fa -> build/bdist.linux-armv7l/wheel/data/examples 2023-09-12T10:45:12,638 copying build/lib.linux-armv7l-cpython-311/data/examples/TAp73alpha.fa -> build/bdist.linux-armv7l/wheel/data/examples 2023-09-12T10:45:12,645 copying build/lib.linux-armv7l-cpython-311/data/examples/MA0099.3.jaspar -> build/bdist.linux-armv7l/wheel/data/examples 2023-09-12T10:45:12,647 copying build/lib.linux-armv7l-cpython-311/data/examples/Gm12878.CTCF.top500.w200.fa -> build/bdist.linux-armv7l/wheel/data/examples 2023-09-12T10:45:12,651 creating build/bdist.linux-armv7l/wheel/data/templates 2023-09-12T10:45:12,652 copying build/lib.linux-armv7l-cpython-311/data/templates/cluster_template.jinja.html -> build/bdist.linux-armv7l/wheel/data/templates 2023-09-12T10:45:12,655 copying build/lib.linux-armv7l-cpython-311/data/templates/report_template.jinja.html -> build/bdist.linux-armv7l/wheel/data/templates 2023-09-12T10:45:12,657 creating build/bdist.linux-armv7l/wheel/data/templates/sortable 2023-09-12T10:45:12,659 copying build/lib.linux-armv7l-cpython-311/data/templates/sortable/sortable-theme-slick.css -> build/bdist.linux-armv7l/wheel/data/templates/sortable 2023-09-12T10:45:12,661 copying build/lib.linux-armv7l-cpython-311/data/templates/sortable/sortable.min.js -> build/bdist.linux-armv7l/wheel/data/templates/sortable 2023-09-12T10:45:12,663 copying build/lib.linux-armv7l-cpython-311/data/templates/star_silver.png -> build/bdist.linux-armv7l/wheel/data/templates 2023-09-12T10:45:12,673 copying build/lib.linux-armv7l-cpython-311/data/templates/star.png -> build/bdist.linux-armv7l/wheel/data/templates 2023-09-12T10:45:12,677 creating build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,678 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_plants.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,681 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv11_HUMAN.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,690 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_nematodes.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,692 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_urochordates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,694 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOMER.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,696 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv10_HUMAN.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,704 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv11_MOUSE.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,707 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/RSAT_insects.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,709 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.plant.v1.0.pwm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,713 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_nematodes.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,715 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,718 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/IMAGE.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,721 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv11_MOUSE.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,732 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.vertebrate.v5.0.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,744 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/RSAT_vertebrates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,758 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_plants.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,763 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_plants.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,765 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/RSAT_plants.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,770 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_vertebrates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,772 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/IMAGE.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,786 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_nematodes.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,788 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv10_HUMAN.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,790 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_urochordates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,792 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_plants.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,797 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,806 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/ENCODE.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,831 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.vertebrate.v3.1.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,834 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOMER.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,838 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_vertebrates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,845 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_fungi.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,847 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.vertebrate.v3.1.factor2motifs.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,851 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,854 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/factorbook.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,856 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/CIS-BP.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,929 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_vertebrates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,941 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_insects.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,944 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.vertebrate.v5.0.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,966 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv11_HUMAN.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,969 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/SwissRegulon.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,979 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_fungi.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,983 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_insects.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,985 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_nematodes.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,987 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv10_MOUSE.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,990 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_vertebrates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:12,993 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/CIS-BP.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:13,009 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_insects.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:13,011 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_urochordates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:13,012 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_fungi.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:13,015 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.invertebrate.v1.0.pwm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:13,021 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/RSAT_insects.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:13,025 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_fungi.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:13,027 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/RSAT_vertebrates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:13,029 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_insects.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:13,031 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_urochordates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:13,033 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv10_MOUSE.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:13,040 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.vertebrate.v3.1.pwm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:13,054 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/factorbook.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:13,059 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/SwissRegulon.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:13,062 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/RSAT_plants.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:13,063 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/ENCODE.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:13,067 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-12T10:45:13,082 copying build/lib.linux-armv7l-cpython-311/data/__init__.py -> build/bdist.linux-armv7l/wheel/data 2023-09-12T10:45:13,084 creating build/bdist.linux-armv7l/wheel/data/cfg 2023-09-12T10:45:13,085 copying build/lib.linux-armv7l-cpython-311/data/cfg/gimmemotifs.default.cfg -> build/bdist.linux-armv7l/wheel/data/cfg 2023-09-12T10:45:13,088 creating build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,089 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/validation.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,091 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/config.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,093 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/background.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,095 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/cli.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,098 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/c_metrics.c -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,100 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/shutils.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,103 creating build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,104 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/posmo.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,105 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/motifsampler.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,107 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/improbizer.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,109 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/hms.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,111 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/bioprospector.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,113 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/memew.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,114 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/gadem.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,116 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/homer.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,118 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/motifprogram.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,119 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/dreme.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,121 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/jaspar.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,123 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/amd.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,125 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/dinamo.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,126 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/xxmotif.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,128 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/weeder.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,130 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/prosampler.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,132 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/meme.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,141 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/rpmcmc.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,143 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,145 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/trawler.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,146 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/chipmunk.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,148 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/mdmodule.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,150 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/yamda.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-12T10:45:13,152 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/plot.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,154 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/comparison.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,157 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/stats.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,160 creating build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-12T10:45:13,161 creating build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/ChIPMunk 2023-09-12T10:45:13,162 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ChIPMunk/ChIPMunk.sh -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/ChIPMunk 2023-09-12T10:45:13,164 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ChIPMunk/chipmunk.jar -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/ChIPMunk 2023-09-12T10:45:13,236 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ameme -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-12T10:45:13,244 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/MDmodule -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-12T10:45:13,247 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/posmo -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-12T10:45:13,250 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/clusterwd -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-12T10:45:13,253 creating build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-09-12T10:45:13,254 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS/theta3.txt -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-09-12T10:45:13,256 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS/theta0.txt -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-09-12T10:45:13,258 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS/theta1.txt -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-09-12T10:45:13,259 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS/theta2.txt -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-09-12T10:45:13,261 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS/hms -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-09-12T10:45:13,264 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/CreateBackgroundModel -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-12T10:45:13,296 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/MotifSampler -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-12T10:45:13,324 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-12T10:45:13,326 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/AMD.bin -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-12T10:45:13,329 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/BioProspector -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-12T10:45:13,332 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/cluster.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,335 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/utils.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,338 creating build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-12T10:45:13,339 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/diff.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-12T10:45:13,341 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/background.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-12T10:45:13,342 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/match.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-12T10:45:13,344 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/cluster.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-12T10:45:13,346 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/motifs.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-12T10:45:13,348 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/threshold.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-12T10:45:13,350 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/location.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-12T10:45:13,352 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/pfmscan.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-12T10:45:13,353 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/logo.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-12T10:45:13,355 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-12T10:45:13,357 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/prediction.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-12T10:45:13,359 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/maelstrom.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-12T10:45:13,360 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/scanner.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,363 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/_version.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,365 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/fasta.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,367 creating build/bdist.linux-armv7l/wheel/gimmemotifs/db 2023-09-12T10:45:13,368 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/db/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/db 2023-09-12T10:45:13,371 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/motif.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,373 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/denovo.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,376 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/moap.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,379 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,381 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/c_metrics.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,385 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/rank.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,387 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/prediction.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,390 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/maelstrom.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,393 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/rocmetrics.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,395 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/report.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-12T10:45:13,398 running install_egg_info 2023-09-12T10:45:13,428 Copying gimmemotifs.egg-info to build/bdist.linux-armv7l/wheel/gimmemotifs-0.14.4-py3.11.egg-info 2023-09-12T10:45:13,442 running install_scripts 2023-09-12T10:45:13,443 creating build/bdist.linux-armv7l/wheel/gimmemotifs-0.14.4.data 2023-09-12T10:45:13,444 creating build/bdist.linux-armv7l/wheel/gimmemotifs-0.14.4.data/scripts 2023-09-12T10:45:13,445 copying build/scripts-3.11/combine_peaks -> build/bdist.linux-armv7l/wheel/gimmemotifs-0.14.4.data/scripts 2023-09-12T10:45:13,447 copying build/scripts-3.11/gimme -> build/bdist.linux-armv7l/wheel/gimmemotifs-0.14.4.data/scripts 2023-09-12T10:45:13,449 copying build/scripts-3.11/coverage_table -> build/bdist.linux-armv7l/wheel/gimmemotifs-0.14.4.data/scripts 2023-09-12T10:45:13,451 changing mode of build/bdist.linux-armv7l/wheel/gimmemotifs-0.14.4.data/scripts/combine_peaks to 755 2023-09-12T10:45:13,452 changing mode of build/bdist.linux-armv7l/wheel/gimmemotifs-0.14.4.data/scripts/gimme to 755 2023-09-12T10:45:13,453 changing mode of build/bdist.linux-armv7l/wheel/gimmemotifs-0.14.4.data/scripts/coverage_table to 755 2023-09-12T10:45:13,509 creating build/bdist.linux-armv7l/wheel/gimmemotifs-0.14.4.dist-info/WHEEL 2023-09-12T10:45:13,511 creating '/tmp/pip-wheel-yw96l82b/gimmemotifs-0.14.4-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-12T10:45:13,514 adding 'data/__init__.py' 2023-09-12T10:45:13,516 adding 'data/bg/hg18.MotifSampler.bg' 2023-09-12T10:45:13,517 adding 'data/bg/hg19.MotifSampler.bg' 2023-09-12T10:45:13,518 adding 'data/bg/hg38.MotifSampler.bg' 2023-09-12T10:45:13,520 adding 'data/bg/mm10.MotifSampler.bg' 2023-09-12T10:45:13,521 adding 'data/bg/mm9.MotifSampler.bg' 2023-09-12T10:45:13,523 adding 'data/bg/xenTro2.MotifSampler.bg' 2023-09-12T10:45:13,525 adding 'data/cfg/gimmemotifs.default.cfg' 2023-09-12T10:45:13,578 adding 'data/examples/Gm12878.CTCF.top500.w200.fa' 2023-09-12T10:45:13,580 adding 'data/examples/MA0099.3.jaspar' 2023-09-12T10:45:13,584 adding 'data/examples/TAp73alpha.bed' 2023-09-12T10:45:13,690 adding 'data/examples/TAp73alpha.fa' 2023-09-12T10:45:13,693 adding 'data/examples/example.pfm' 2023-09-12T10:45:13,694 adding 'data/examples/test.small.fa' 2023-09-12T10:45:13,736 adding 'data/motif_databases/CIS-BP.motif2factors.txt' 2023-09-12T10:45:14,528 adding 'data/motif_databases/CIS-BP.pfm' 2023-09-12T10:45:14,568 adding 'data/motif_databases/ENCODE.motif2factors.txt' 2023-09-12T10:45:14,774 adding 'data/motif_databases/ENCODE.pfm' 2023-09-12T10:45:14,785 adding 'data/motif_databases/HOCOMOCOv10_HUMAN.motif2factors.txt' 2023-09-12T10:45:14,877 adding 'data/motif_databases/HOCOMOCOv10_HUMAN.pfm' 2023-09-12T10:45:14,882 adding 'data/motif_databases/HOCOMOCOv10_MOUSE.motif2factors.txt' 2023-09-12T10:45:14,944 adding 'data/motif_databases/HOCOMOCOv10_MOUSE.pfm' 2023-09-12T10:45:14,949 adding 'data/motif_databases/HOCOMOCOv11_HUMAN.motif2factors.txt' 2023-09-12T10:45:14,987 adding 'data/motif_databases/HOCOMOCOv11_HUMAN.pfm' 2023-09-12T10:45:14,992 adding 'data/motif_databases/HOCOMOCOv11_MOUSE.motif2factors.txt' 2023-09-12T10:45:15,023 adding 'data/motif_databases/HOCOMOCOv11_MOUSE.pfm' 2023-09-12T10:45:15,028 adding 'data/motif_databases/HOMER.motif2factors.txt' 2023-09-12T10:45:15,058 adding 'data/motif_databases/HOMER.pfm' 2023-09-12T10:45:15,064 adding 'data/motif_databases/IMAGE.motif2factors.txt' 2023-09-12T10:45:15,234 adding 'data/motif_databases/IMAGE.pfm' 2023-09-12T10:45:15,248 adding 'data/motif_databases/JASPAR2018.motif2factors.txt' 2023-09-12T10:45:15,354 adding 'data/motif_databases/JASPAR2018.pfm' 2023-09-12T10:45:15,360 adding 'data/motif_databases/JASPAR2018_fungi.motif2factors.txt' 2023-09-12T10:45:15,370 adding 'data/motif_databases/JASPAR2018_fungi.pfm' 2023-09-12T10:45:15,372 adding 'data/motif_databases/JASPAR2018_insects.motif2factors.txt' 2023-09-12T10:45:15,377 adding 'data/motif_databases/JASPAR2018_insects.pfm' 2023-09-12T10:45:15,379 adding 'data/motif_databases/JASPAR2018_nematodes.motif2factors.txt' 2023-09-12T10:45:15,381 adding 'data/motif_databases/JASPAR2018_nematodes.pfm' 2023-09-12T10:45:15,384 adding 'data/motif_databases/JASPAR2018_plants.motif2factors.txt' 2023-09-12T10:45:15,423 adding 'data/motif_databases/JASPAR2018_plants.pfm' 2023-09-12T10:45:15,426 adding 'data/motif_databases/JASPAR2018_urochordates.motif2factors.txt' 2023-09-12T10:45:15,427 adding 'data/motif_databases/JASPAR2018_urochordates.pfm' 2023-09-12T10:45:15,430 adding 'data/motif_databases/JASPAR2018_vertebrates.motif2factors.txt' 2023-09-12T10:45:15,479 adding 'data/motif_databases/JASPAR2018_vertebrates.pfm' 2023-09-12T10:45:15,491 adding 'data/motif_databases/JASPAR2020.motif2factors.txt' 2023-09-12T10:45:15,658 adding 'data/motif_databases/JASPAR2020.pfm' 2023-09-12T10:45:15,665 adding 'data/motif_databases/JASPAR2020_fungi.motif2factors.txt' 2023-09-12T10:45:15,678 adding 'data/motif_databases/JASPAR2020_fungi.pfm' 2023-09-12T10:45:15,680 adding 'data/motif_databases/JASPAR2020_insects.motif2factors.txt' 2023-09-12T10:45:15,687 adding 'data/motif_databases/JASPAR2020_insects.pfm' 2023-09-12T10:45:15,688 adding 'data/motif_databases/JASPAR2020_nematodes.motif2factors.txt' 2023-09-12T10:45:15,691 adding 'data/motif_databases/JASPAR2020_nematodes.pfm' 2023-09-12T10:45:15,695 adding 'data/motif_databases/JASPAR2020_plants.motif2factors.txt' 2023-09-12T10:45:15,748 adding 'data/motif_databases/JASPAR2020_plants.pfm' 2023-09-12T10:45:15,751 adding 'data/motif_databases/JASPAR2020_urochordates.motif2factors.txt' 2023-09-12T10:45:15,753 adding 'data/motif_databases/JASPAR2020_urochordates.pfm' 2023-09-12T10:45:15,758 adding 'data/motif_databases/JASPAR2020_vertebrates.motif2factors.txt' 2023-09-12T10:45:15,847 adding 'data/motif_databases/JASPAR2020_vertebrates.pfm' 2023-09-12T10:45:15,851 adding 'data/motif_databases/RSAT_insects.motif2factors.txt' 2023-09-12T10:45:15,876 adding 'data/motif_databases/RSAT_insects.pfm' 2023-09-12T10:45:15,878 adding 'data/motif_databases/RSAT_plants.motif2factors.txt' 2023-09-12T10:45:15,909 adding 'data/motif_databases/RSAT_plants.pfm' 2023-09-12T10:45:15,911 adding 'data/motif_databases/RSAT_vertebrates.motif2factors.txt' 2023-09-12T10:45:16,114 adding 'data/motif_databases/RSAT_vertebrates.pfm' 2023-09-12T10:45:16,124 adding 'data/motif_databases/SwissRegulon.motif2factors.txt' 2023-09-12T10:45:16,186 adding 'data/motif_databases/SwissRegulon.pfm' 2023-09-12T10:45:16,190 adding 'data/motif_databases/factorbook.motif2factors.txt' 2023-09-12T10:45:16,222 adding 'data/motif_databases/factorbook.pfm' 2023-09-12T10:45:16,256 adding 'data/motif_databases/gimme.invertebrate.v1.0.pwm' 2023-09-12T10:45:16,275 adding 'data/motif_databases/gimme.plant.v1.0.pwm' 2023-09-12T10:45:16,280 adding 'data/motif_databases/gimme.vertebrate.v3.1.factor2motifs.txt' 2023-09-12T10:45:16,284 adding 'data/motif_databases/gimme.vertebrate.v3.1.motif2factors.txt' 2023-09-12T10:45:16,389 adding 'data/motif_databases/gimme.vertebrate.v3.1.pwm' 2023-09-12T10:45:16,421 adding 'data/motif_databases/gimme.vertebrate.v5.0.motif2factors.txt' 2023-09-12T10:45:16,584 adding 'data/motif_databases/gimme.vertebrate.v5.0.pfm' 2023-09-12T10:45:16,593 adding 'data/score_dists/dic2_bg_mean_sd.txt' 2023-09-12T10:45:16,595 adding 'data/score_dists/dic2_mean_sd.txt' 2023-09-12T10:45:16,597 adding 'data/score_dists/total_wic_mean_score_dist.txt' 2023-09-12T10:45:16,599 adding 'data/templates/cluster_template.jinja.html' 2023-09-12T10:45:16,601 adding 'data/templates/report_template.jinja.html' 2023-09-12T10:45:16,603 adding 'data/templates/star.png' 2023-09-12T10:45:16,605 adding 'data/templates/star_silver.png' 2023-09-12T10:45:16,607 adding 'data/templates/sortable/sortable-theme-slick.css' 2023-09-12T10:45:16,608 adding 'data/templates/sortable/sortable.min.js' 2023-09-12T10:45:16,611 adding 'gimmemotifs/__init__.py' 2023-09-12T10:45:16,612 adding 'gimmemotifs/_version.py' 2023-09-12T10:45:16,615 adding 'gimmemotifs/background.py' 2023-09-12T10:45:16,617 adding 'gimmemotifs/c_metrics.c' 2023-09-12T10:45:16,627 adding 'gimmemotifs/c_metrics.cpython-311-arm-linux-gnueabihf.so' 2023-09-12T10:45:16,630 adding 'gimmemotifs/cli.py' 2023-09-12T10:45:16,632 adding 'gimmemotifs/cluster.py' 2023-09-12T10:45:16,639 adding 'gimmemotifs/comparison.py' 2023-09-12T10:45:16,641 adding 'gimmemotifs/config.py' 2023-09-12T10:45:16,644 adding 'gimmemotifs/denovo.py' 2023-09-12T10:45:16,645 adding 'gimmemotifs/fasta.py' 2023-09-12T10:45:16,649 adding 'gimmemotifs/maelstrom.py' 2023-09-12T10:45:16,653 adding 'gimmemotifs/moap.py' 2023-09-12T10:45:16,659 adding 'gimmemotifs/motif.py' 2023-09-12T10:45:16,661 adding 'gimmemotifs/plot.py' 2023-09-12T10:45:16,663 adding 'gimmemotifs/prediction.py' 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'gimmemotifs/commands/motifs.py' 2023-09-12T10:45:16,693 adding 'gimmemotifs/commands/pfmscan.py' 2023-09-12T10:45:16,695 adding 'gimmemotifs/commands/prediction.py' 2023-09-12T10:45:16,696 adding 'gimmemotifs/commands/threshold.py' 2023-09-12T10:45:16,699 adding 'gimmemotifs/db/__init__.py' 2023-09-12T10:45:16,713 adding 'gimmemotifs/included_tools/AMD.bin' 2023-09-12T10:45:16,723 adding 'gimmemotifs/included_tools/BioProspector' 2023-09-12T10:45:16,970 adding 'gimmemotifs/included_tools/CreateBackgroundModel' 2023-09-12T10:45:16,991 adding 'gimmemotifs/included_tools/MDmodule' 2023-09-12T10:45:17,273 adding 'gimmemotifs/included_tools/MotifSampler' 2023-09-12T10:45:17,287 adding 'gimmemotifs/included_tools/__init__.py' 2023-09-12T10:45:17,351 adding 'gimmemotifs/included_tools/ameme' 2023-09-12T10:45:17,359 adding 'gimmemotifs/included_tools/clusterwd' 2023-09-12T10:45:17,364 adding 'gimmemotifs/included_tools/posmo' 2023-09-12T10:45:17,366 adding 'gimmemotifs/included_tools/ChIPMunk/ChIPMunk.sh' 2023-09-12T10:45:17,916 adding 'gimmemotifs/included_tools/ChIPMunk/chipmunk.jar' 2023-09-12T10:45:17,970 adding 'gimmemotifs/included_tools/HMS/hms' 2023-09-12T10:45:17,972 adding 'gimmemotifs/included_tools/HMS/theta0.txt' 2023-09-12T10:45:17,973 adding 'gimmemotifs/included_tools/HMS/theta1.txt' 2023-09-12T10:45:17,974 adding 'gimmemotifs/included_tools/HMS/theta2.txt' 2023-09-12T10:45:17,975 adding 'gimmemotifs/included_tools/HMS/theta3.txt' 2023-09-12T10:45:17,978 adding 'gimmemotifs/tools/__init__.py' 2023-09-12T10:45:17,979 adding 'gimmemotifs/tools/amd.py' 2023-09-12T10:45:17,980 adding 'gimmemotifs/tools/bioprospector.py' 2023-09-12T10:45:17,982 adding 'gimmemotifs/tools/chipmunk.py' 2023-09-12T10:45:17,983 adding 'gimmemotifs/tools/dinamo.py' 2023-09-12T10:45:17,984 adding 'gimmemotifs/tools/dreme.py' 2023-09-12T10:45:17,986 adding 'gimmemotifs/tools/gadem.py' 2023-09-12T10:45:17,987 adding 'gimmemotifs/tools/hms.py' 2023-09-12T10:45:17,989 adding 'gimmemotifs/tools/homer.py' 2023-09-12T10:45:17,990 adding 'gimmemotifs/tools/improbizer.py' 2023-09-12T10:45:17,991 adding 'gimmemotifs/tools/jaspar.py' 2023-09-12T10:45:17,993 adding 'gimmemotifs/tools/mdmodule.py' 2023-09-12T10:45:17,994 adding 'gimmemotifs/tools/meme.py' 2023-09-12T10:45:17,996 adding 'gimmemotifs/tools/memew.py' 2023-09-12T10:45:17,997 adding 'gimmemotifs/tools/motifprogram.py' 2023-09-12T10:45:17,998 adding 'gimmemotifs/tools/motifsampler.py' 2023-09-12T10:45:18,000 adding 'gimmemotifs/tools/posmo.py' 2023-09-12T10:45:18,002 adding 'gimmemotifs/tools/prosampler.py' 2023-09-12T10:45:18,003 adding 'gimmemotifs/tools/rpmcmc.py' 2023-09-12T10:45:18,005 adding 'gimmemotifs/tools/trawler.py' 2023-09-12T10:45:18,006 adding 'gimmemotifs/tools/weeder.py' 2023-09-12T10:45:18,007 adding 'gimmemotifs/tools/xxmotif.py' 2023-09-12T10:45:18,009 adding 'gimmemotifs/tools/yamda.py' 2023-09-12T10:45:18,011 adding 'gimmemotifs-0.14.4.data/scripts/combine_peaks' 2023-09-12T10:45:18,013 adding 'gimmemotifs-0.14.4.data/scripts/coverage_table' 2023-09-12T10:45:18,014 adding 'gimmemotifs-0.14.4.data/scripts/gimme' 2023-09-12T10:45:18,016 adding 'gimmemotifs-0.14.4.dist-info/COPYING' 2023-09-12T10:45:18,017 adding 'gimmemotifs-0.14.4.dist-info/METADATA' 2023-09-12T10:45:18,018 adding 'gimmemotifs-0.14.4.dist-info/WHEEL' 2023-09-12T10:45:18,019 adding 'gimmemotifs-0.14.4.dist-info/top_level.txt' 2023-09-12T10:45:18,022 adding 'gimmemotifs-0.14.4.dist-info/RECORD' 2023-09-12T10:45:18,141 removing build/bdist.linux-armv7l/wheel 2023-09-12T10:45:18,331 Building wheel for gimmemotifs (setup.py): finished with status 'done' 2023-09-12T10:45:18,453 Created wheel for gimmemotifs: filename=gimmemotifs-0.14.4-cp311-cp311-linux_armv7l.whl size=10157846 sha256=5f1ddb4d83f22119d3cc973ee4a7d13f0b60772613f56f6f70ef88031b5bbddf 2023-09-12T10:45:18,454 Stored in directory: /tmp/pip-ephem-wheel-cache-_bs0b962/wheels/ae/b5/97/6351f8cf3cd2f8f02a420b79d5bf9512ee653a49af33a561d9 2023-09-12T10:45:18,472 Successfully built gimmemotifs 2023-09-12T10:45:18,718 Removed build tracker: '/tmp/pip-build-tracker-bigu1g0o'