2023-09-12T16:23:42,258 Created temporary directory: /tmp/pip-build-tracker-tq6do0yz
2023-09-12T16:23:42,260 Initialized build tracking at /tmp/pip-build-tracker-tq6do0yz
2023-09-12T16:23:42,260 Created build tracker: /tmp/pip-build-tracker-tq6do0yz
2023-09-12T16:23:42,261 Entered build tracker: /tmp/pip-build-tracker-tq6do0yz
2023-09-12T16:23:42,261 Created temporary directory: /tmp/pip-wheel-kyrm17rv
2023-09-12T16:23:42,264 Created temporary directory: /tmp/pip-ephem-wheel-cache-br9pkl_f
2023-09-12T16:23:42,286 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-12T16:23:42,290 2 location(s) to search for versions of schictools:
2023-09-12T16:23:42,290 * https://pypi.org/simple/schictools/
2023-09-12T16:23:42,290 * https://www.piwheels.org/simple/schictools/
2023-09-12T16:23:42,291 Fetching project page and analyzing links: https://pypi.org/simple/schictools/
2023-09-12T16:23:42,292 Getting page https://pypi.org/simple/schictools/
2023-09-12T16:23:42,293 Found index url https://pypi.org/simple/
2023-09-12T16:23:42,439 Fetched page https://pypi.org/simple/schictools/ as application/vnd.pypi.simple.v1+json
2023-09-12T16:23:42,440   Found link https://files.pythonhosted.org/packages/a2/9f/6b20e58eed146082c6e8d14d4313a5c6043366fed84f65c3222f8d2261a0/scHiCTools-0.0.1.tar.gz (from https://pypi.org/simple/schictools/), version: 0.0.1
2023-09-12T16:23:42,441   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/53/ec/9d17dbb761a4c9708dd4b11039636be052d0046b0e898edf3ef2d82c209d/scHiCTools-0.0.2-py3.7.egg (from https://pypi.org/simple/schictools/)
2023-09-12T16:23:42,442   Found link https://files.pythonhosted.org/packages/7a/d8/f23804803f0290950482e4500fad0f9756707ead98b04cf7218f6366979a/scHiCTools-0.0.2.tar.gz (from https://pypi.org/simple/schictools/), version: 0.0.2
2023-09-12T16:23:42,442   Found link https://files.pythonhosted.org/packages/6c/ad/aee71dfca03663492e178e39d23cba1c1f1a7baddd3bbedfcff207d346ca/scHiCTools-0.0.3.tar.gz (from https://pypi.org/simple/schictools/), version: 0.0.3
2023-09-12T16:23:42,443 Fetching project page and analyzing links: https://www.piwheels.org/simple/schictools/
2023-09-12T16:23:42,444 Getting page https://www.piwheels.org/simple/schictools/
2023-09-12T16:23:42,446 Found index url https://www.piwheels.org/simple/
2023-09-12T16:23:42,721 Fetched page https://www.piwheels.org/simple/schictools/ as text/html
2023-09-12T16:23:42,722 Skipping link: not a file: https://www.piwheels.org/simple/schictools/
2023-09-12T16:23:42,723 Skipping link: not a file: https://pypi.org/simple/schictools/
2023-09-12T16:23:42,743 Given no hashes to check 1 links for project 'schictools': discarding no candidates
2023-09-12T16:23:42,763 Collecting schictools==0.0.3
2023-09-12T16:23:42,765   Created temporary directory: /tmp/pip-unpack-_rddjw4_
2023-09-12T16:23:43,426   Downloading scHiCTools-0.0.3.tar.gz (55 kB)
2023-09-12T16:23:43,533   Added schictools==0.0.3 from https://files.pythonhosted.org/packages/6c/ad/aee71dfca03663492e178e39d23cba1c1f1a7baddd3bbedfcff207d346ca/scHiCTools-0.0.3.tar.gz to build tracker '/tmp/pip-build-tracker-tq6do0yz'
2023-09-12T16:23:43,534   Running setup.py (path:/tmp/pip-wheel-kyrm17rv/schictools_999e7f795b5244a193aea1e66ba79a18/setup.py) egg_info for package schictools
2023-09-12T16:23:43,535   Created temporary directory: /tmp/pip-pip-egg-info-h6vd83c4
2023-09-12T16:23:43,536   Preparing metadata (setup.py): started
2023-09-12T16:23:43,537   Running command python setup.py egg_info
2023-09-12T16:23:43,981   Traceback (most recent call last):
2023-09-12T16:23:43,982     File "<string>", line 2, in <module>
2023-09-12T16:23:43,982     File "<pip-setuptools-caller>", line 34, in <module>
2023-09-12T16:23:43,983     File "/tmp/pip-wheel-kyrm17rv/schictools_999e7f795b5244a193aea1e66ba79a18/setup.py", line 18, in <module>
2023-09-12T16:23:43,984       install_requires = get_requirements('requirements.txt')
2023-09-12T16:23:43,985                          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T16:23:43,986     File "/tmp/pip-wheel-kyrm17rv/schictools_999e7f795b5244a193aea1e66ba79a18/setup.py", line 10, in get_requirements
2023-09-12T16:23:43,987       with open(path, "r") as fh:
2023-09-12T16:23:43,989            ^^^^^^^^^^^^^^^
2023-09-12T16:23:43,989   FileNotFoundError: [Errno 2] No such file or directory: 'requirements.txt'
2023-09-12T16:23:44,052   ERROR: [present-rich] python setup.py egg_info exited with 1
2023-09-12T16:23:44,065   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2023-09-12T16:23:44,065   exec(compile('"'"''"'"''"'"'
2023-09-12T16:23:44,065   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-12T16:23:44,065   #
2023-09-12T16:23:44,065   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-12T16:23:44,065   #   import from `distutils.core` to work with newer packaging standards.
2023-09-12T16:23:44,065   # - It provides a clear error message when setuptools is not installed.
2023-09-12T16:23:44,065   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-12T16:23:44,065   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-12T16:23:44,065   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-12T16:23:44,065   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-12T16:23:44,065   import os, sys, tokenize
2023-09-12T16:23:44,065   
2023-09-12T16:23:44,065   try:
2023-09-12T16:23:44,065       import setuptools
2023-09-12T16:23:44,065   except ImportError as error:
2023-09-12T16:23:44,065       print(
2023-09-12T16:23:44,065           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-12T16:23:44,065           "the build environment.",
2023-09-12T16:23:44,065           file=sys.stderr,
2023-09-12T16:23:44,065       )
2023-09-12T16:23:44,065       sys.exit(1)
2023-09-12T16:23:44,065   
2023-09-12T16:23:44,065   __file__ = %r
2023-09-12T16:23:44,065   sys.argv[0] = __file__
2023-09-12T16:23:44,065   
2023-09-12T16:23:44,065   if os.path.exists(__file__):
2023-09-12T16:23:44,065       filename = __file__
2023-09-12T16:23:44,065       with tokenize.open(__file__) as f:
2023-09-12T16:23:44,065           setup_py_code = f.read()
2023-09-12T16:23:44,065   else:
2023-09-12T16:23:44,065       filename = "<auto-generated setuptools caller>"
2023-09-12T16:23:44,065       setup_py_code = "from setuptools import setup; setup()"
2023-09-12T16:23:44,065   
2023-09-12T16:23:44,065   exec(compile(setup_py_code, filename, "exec"))
2023-09-12T16:23:44,065   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-kyrm17rv/schictools_999e7f795b5244a193aea1e66ba79a18/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-h6vd83c4[/]
2023-09-12T16:23:44,065   [bold magenta]cwd[/]: /tmp/pip-wheel-kyrm17rv/schictools_999e7f795b5244a193aea1e66ba79a18/
2023-09-12T16:23:44,066   Preparing metadata (setup.py): finished with status 'error'
2023-09-12T16:23:44,067 ERROR: [present-rich] metadata generation failed
2023-09-12T16:23:44,073 Exception information:
2023-09-12T16:23:44,073 Traceback (most recent call last):
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2023-09-12T16:23:44,073     call_subprocess(
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2023-09-12T16:23:44,073     raise error
2023-09-12T16:23:44,073 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2023-09-12T16:23:44,073 
2023-09-12T16:23:44,073 The above exception was the direct cause of the following exception:
2023-09-12T16:23:44,073 
2023-09-12T16:23:44,073 Traceback (most recent call last):
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-12T16:23:44,073     status = run_func(*args)
2023-09-12T16:23:44,073              ^^^^^^^^^^^^^^^
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-12T16:23:44,073     return func(self, options, args)
2023-09-12T16:23:44,073            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2023-09-12T16:23:44,073     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2023-09-12T16:23:44,073                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve
2023-09-12T16:23:44,073     result = self._result = resolver.resolve(
2023-09-12T16:23:44,073                             ^^^^^^^^^^^^^^^^^
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2023-09-12T16:23:44,073     state = resolution.resolve(requirements, max_rounds=max_rounds)
2023-09-12T16:23:44,073             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2023-09-12T16:23:44,073     self._add_to_criteria(self.state.criteria, r, parent=None)
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2023-09-12T16:23:44,073     if not criterion.candidates:
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2023-09-12T16:23:44,073     return bool(self._sequence)
2023-09-12T16:23:44,073            ^^^^^^^^^^^^^^^^^^^^
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2023-09-12T16:23:44,073     return any(self)
2023-09-12T16:23:44,073            ^^^^^^^^^
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2023-09-12T16:23:44,073     return (c for c in iterator if id(c) not in self._incompatible_ids)
2023-09-12T16:23:44,073            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2023-09-12T16:23:44,073     candidate = func()
2023-09-12T16:23:44,073                 ^^^^^^
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link
2023-09-12T16:23:44,073     self._link_candidate_cache[link] = LinkCandidate(
2023-09-12T16:23:44,073                                        ^^^^^^^^^^^^^^
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__
2023-09-12T16:23:44,073     super().__init__(
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
2023-09-12T16:23:44,073     self.dist = self._prepare()
2023-09-12T16:23:44,073                 ^^^^^^^^^^^^^^^
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare
2023-09-12T16:23:44,073     dist = self._prepare_distribution()
2023-09-12T16:23:44,073            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution
2023-09-12T16:23:44,073     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2023-09-12T16:23:44,073            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement
2023-09-12T16:23:44,073     return self._prepare_linked_requirement(req, parallel_builds)
2023-09-12T16:23:44,073            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement
2023-09-12T16:23:44,073     dist = _get_prepared_distribution(
2023-09-12T16:23:44,073            ^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution
2023-09-12T16:23:44,073     abstract_dist.prepare_distribution_metadata(
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata
2023-09-12T16:23:44,073     self.req.prepare_metadata()
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata
2023-09-12T16:23:44,073     self.metadata_directory = generate_metadata_legacy(
2023-09-12T16:23:44,073                               ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T16:23:44,073   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2023-09-12T16:23:44,073     raise MetadataGenerationFailed(package_details=details) from error
2023-09-12T16:23:44,073 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2023-09-12T16:23:44,086 Removed schictools==0.0.3 from https://files.pythonhosted.org/packages/6c/ad/aee71dfca03663492e178e39d23cba1c1f1a7baddd3bbedfcff207d346ca/scHiCTools-0.0.3.tar.gz from build tracker '/tmp/pip-build-tracker-tq6do0yz'
2023-09-12T16:23:44,087 Removed build tracker: '/tmp/pip-build-tracker-tq6do0yz'