2023-09-12T18:15:49,763 Created temporary directory: /tmp/pip-build-tracker-oumnsrps 2023-09-12T18:15:49,764 Initialized build tracking at /tmp/pip-build-tracker-oumnsrps 2023-09-12T18:15:49,764 Created build tracker: /tmp/pip-build-tracker-oumnsrps 2023-09-12T18:15:49,765 Entered build tracker: /tmp/pip-build-tracker-oumnsrps 2023-09-12T18:15:49,766 Created temporary directory: /tmp/pip-wheel-s7thsmnk 2023-09-12T18:15:49,769 Created temporary directory: /tmp/pip-ephem-wheel-cache-oqifs_ix 2023-09-12T18:15:49,791 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-12T18:15:49,795 2 location(s) to search for versions of molnet-python: 2023-09-12T18:15:49,795 * https://pypi.org/simple/molnet-python/ 2023-09-12T18:15:49,795 * https://www.piwheels.org/simple/molnet-python/ 2023-09-12T18:15:49,796 Fetching project page and analyzing links: https://pypi.org/simple/molnet-python/ 2023-09-12T18:15:49,796 Getting page https://pypi.org/simple/molnet-python/ 2023-09-12T18:15:49,798 Found index url https://pypi.org/simple/ 2023-09-12T18:15:49,937 Fetched page https://pypi.org/simple/molnet-python/ as application/vnd.pypi.simple.v1+json 2023-09-12T18:15:49,940 Found link https://files.pythonhosted.org/packages/5d/08/98de9fa9e6ff84b42f171d64cb6779657f7dfbf5601013ab4d8b10bf0182/molnet-python-0.0.1.tar.gz (from https://pypi.org/simple/molnet-python/) (requires-python:>=3.6), version: 0.0.1 2023-09-12T18:15:49,941 Skipping link: No binaries permitted for molnet-python: https://files.pythonhosted.org/packages/c8/ab/fe6b07bfe7378c46b221bd1ef6cb0f9044126dba10c2e7a8947105a865f2/molnet_python-0.0.1-py3-none-any.whl (from https://pypi.org/simple/molnet-python/) (requires-python:>=3.6) 2023-09-12T18:15:49,942 Found link https://files.pythonhosted.org/packages/cd/96/b8b24082c5cf5c19367793d0aa374472f5b27412009e9bd483a1ace4f4cb/molnet-python-0.0.2.tar.gz (from https://pypi.org/simple/molnet-python/) (requires-python:>=3.6), version: 0.0.2 2023-09-12T18:15:49,943 Found link https://files.pythonhosted.org/packages/68/68/719d53854c6c658c5a03f57a04ca9d4248f440de5b1691d4350a299d58ba/molnet-python-0.0.3.tar.gz (from https://pypi.org/simple/molnet-python/) (requires-python:>=3.6), version: 0.0.3 2023-09-12T18:15:49,943 Found link https://files.pythonhosted.org/packages/4a/ac/7850baa965ca31f485e20a4fc20c6f83ac2b16c7f2491065a2eaa0957384/molnet-python-0.0.4.tar.gz (from https://pypi.org/simple/molnet-python/) (requires-python:>=3.6), version: 0.0.4 2023-09-12T18:15:49,944 Found link https://files.pythonhosted.org/packages/7a/b1/681a25b343b09c0a3b81a87009cc5249db5c97f12390cf841cdf86ef980a/molnet-python-0.0.5.tar.gz (from https://pypi.org/simple/molnet-python/) (requires-python:>=3.6), version: 0.0.5 2023-09-12T18:15:49,946 Found link https://files.pythonhosted.org/packages/f7/ba/a3735f84083dfe20a9264d6dcb8fa0010e8569f1fe9f4e9c5a2acfb22dcd/molnet-python-0.0.6.tar.gz (from https://pypi.org/simple/molnet-python/) (requires-python:>=3.6), version: 0.0.6 2023-09-12T18:15:49,947 Found link https://files.pythonhosted.org/packages/b4/68/10630f3d68007590a4ff0545559fabcde007ca5fbf02f1346d2c4d3608da/molnet-python-0.0.7.tar.gz (from https://pypi.org/simple/molnet-python/) (requires-python:>=3.6), version: 0.0.7 2023-09-12T18:15:49,948 Found link https://files.pythonhosted.org/packages/7b/d0/bef9b32d0a8f95a0e493ec9c3e2e70e6d1643ddb160c8d000c663e6001e1/molnet-python-0.0.8.tar.gz (from https://pypi.org/simple/molnet-python/) (requires-python:>=3.6), version: 0.0.8 2023-09-12T18:15:49,949 Found link https://files.pythonhosted.org/packages/7f/85/940dd7f8fa57754cd8198e3a7e2c53be53d222de2258e0776546c7128dd8/molnet-python-0.0.9.tar.gz (from https://pypi.org/simple/molnet-python/) (requires-python:>=3.6), version: 0.0.9 2023-09-12T18:15:49,950 Fetching project page and analyzing links: https://www.piwheels.org/simple/molnet-python/ 2023-09-12T18:15:49,950 Getting page https://www.piwheels.org/simple/molnet-python/ 2023-09-12T18:15:49,952 Found index url https://www.piwheels.org/simple/ 2023-09-12T18:15:51,692 Fetched page https://www.piwheels.org/simple/molnet-python/ as text/html 2023-09-12T18:15:51,698 Skipping link: No binaries permitted for molnet-python: https://www.piwheels.org/simple/molnet-python/molnet_python-0.0.1-py3-none-any.whl#sha256=2f6b15d5d7035dcdd4eb7a1ba6aa480ea2b97a265e1589b5cc03f22ef85e5b30 (from https://www.piwheels.org/simple/molnet-python/) (requires-python:>=3.6) 2023-09-12T18:15:51,700 Skipping link: No binaries permitted for molnet-python: https://www.piwheels.org/simple/molnet-python/molnet_python-0.0.2-py3-none-any.whl#sha256=3534765c8a825605c134dbe65b47759dd6fc9eb8f02a73e7b06cb9e3c186e9c3 (from https://www.piwheels.org/simple/molnet-python/) (requires-python:>=3.6) 2023-09-12T18:15:51,701 Skipping link: No binaries permitted for molnet-python: https://www.piwheels.org/simple/molnet-python/molnet_python-0.0.3-py3-none-any.whl#sha256=c000b7a2a668a041541f0d1c1494025731f2e17df6f8450fc4e2d10fcc02bc95 (from https://www.piwheels.org/simple/molnet-python/) (requires-python:>=3.6) 2023-09-12T18:15:51,701 Skipping link: No binaries permitted for molnet-python: https://www.piwheels.org/simple/molnet-python/molnet_python-0.0.4-py3-none-any.whl#sha256=843c51ddfdc17d4958468d77a795344e357083af17da3065ae994d16cd1cba26 (from https://www.piwheels.org/simple/molnet-python/) (requires-python:>=3.6) 2023-09-12T18:15:51,702 Skipping link: No binaries permitted for molnet-python: https://www.piwheels.org/simple/molnet-python/molnet_python-0.0.5-py3-none-any.whl#sha256=3d16e1fc479989fd12ac16e3747c153c9cd3c0063e2145074a11c87f256631f6 (from https://www.piwheels.org/simple/molnet-python/) (requires-python:>=3.6) 2023-09-12T18:15:51,703 Skipping link: not a file: https://www.piwheels.org/simple/molnet-python/ 2023-09-12T18:15:51,704 Skipping link: not a file: https://pypi.org/simple/molnet-python/ 2023-09-12T18:15:51,750 Given no hashes to check 1 links for project 'molnet-python': discarding no candidates 2023-09-12T18:15:51,779 Collecting molnet-python==0.0.7 2023-09-12T18:15:51,781 Created temporary directory: /tmp/pip-unpack-zmtdg2fl 2023-09-12T18:15:51,998 Downloading molnet-python-0.0.7.tar.gz (17 kB) 2023-09-12T18:15:52,061 Added molnet-python==0.0.7 from https://files.pythonhosted.org/packages/b4/68/10630f3d68007590a4ff0545559fabcde007ca5fbf02f1346d2c4d3608da/molnet-python-0.0.7.tar.gz to build tracker '/tmp/pip-build-tracker-oumnsrps' 2023-09-12T18:15:52,062 Running setup.py (path:/tmp/pip-wheel-s7thsmnk/molnet-python_b29459ae1d09448da037981b5dda08df/setup.py) egg_info for package molnet-python 2023-09-12T18:15:52,063 Created temporary directory: /tmp/pip-pip-egg-info-wnxv4ckk 2023-09-12T18:15:52,064 Preparing metadata (setup.py): started 2023-09-12T18:15:52,065 Running command python setup.py egg_info 2023-09-12T18:15:52,483 Traceback (most recent call last): 2023-09-12T18:15:52,483 File "", line 2, in 2023-09-12T18:15:52,484 File "", line 34, in 2023-09-12T18:15:52,484 File "/tmp/pip-wheel-s7thsmnk/molnet-python_b29459ae1d09448da037981b5dda08df/setup.py", line 2, in 2023-09-12T18:15:52,485 import molnet 2023-09-12T18:15:52,486 File "/tmp/pip-wheel-s7thsmnk/molnet-python_b29459ae1d09448da037981b5dda08df/molnet/__init__.py", line 1, in 2023-09-12T18:15:52,487 from molnet.molnet_config import molnet_config 2023-09-12T18:15:52,488 File "/tmp/pip-wheel-s7thsmnk/molnet-python_b29459ae1d09448da037981b5dda08df/molnet/molnet_config.py", line 1, in 2023-09-12T18:15:52,489 from molnet.utils import Config 2023-09-12T18:15:52,490 File "/tmp/pip-wheel-s7thsmnk/molnet-python_b29459ae1d09448da037981b5dda08df/molnet/utils.py", line 1, in 2023-09-12T18:15:52,491 from rdkit.Chem import SaltRemover 2023-09-12T18:15:52,492 ModuleNotFoundError: No module named 'rdkit' 2023-09-12T18:15:52,554 ERROR: [present-rich] python setup.py egg_info exited with 1 2023-09-12T18:15:52,567 [bold magenta]full command[/]: [blue]/usr/bin/python3 -c ' 2023-09-12T18:15:52,567 exec(compile('"'"''"'"''"'"' 2023-09-12T18:15:52,567 # This is -- a caller that pip uses to run setup.py 2023-09-12T18:15:52,567 # 2023-09-12T18:15:52,567 # - It imports setuptools before invoking setup.py, to enable projects that directly 2023-09-12T18:15:52,567 # import from `distutils.core` to work with newer packaging standards. 2023-09-12T18:15:52,567 # - It provides a clear error message when setuptools is not installed. 2023-09-12T18:15:52,567 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2023-09-12T18:15:52,567 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2023-09-12T18:15:52,567 # manifest_maker: standard file '"'"'-c'"'"' not found". 2023-09-12T18:15:52,567 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2023-09-12T18:15:52,567 import os, sys, tokenize 2023-09-12T18:15:52,567 2023-09-12T18:15:52,567 try: 2023-09-12T18:15:52,567 import setuptools 2023-09-12T18:15:52,567 except ImportError as error: 2023-09-12T18:15:52,567 print( 2023-09-12T18:15:52,567 "ERROR: Can not execute `setup.py` since setuptools is not available in " 2023-09-12T18:15:52,567 "the build environment.", 2023-09-12T18:15:52,567 file=sys.stderr, 2023-09-12T18:15:52,567 ) 2023-09-12T18:15:52,567 sys.exit(1) 2023-09-12T18:15:52,567 2023-09-12T18:15:52,567 __file__ = %r 2023-09-12T18:15:52,567 sys.argv[0] = __file__ 2023-09-12T18:15:52,567 2023-09-12T18:15:52,567 if os.path.exists(__file__): 2023-09-12T18:15:52,567 filename = __file__ 2023-09-12T18:15:52,567 with tokenize.open(__file__) as f: 2023-09-12T18:15:52,567 setup_py_code = f.read() 2023-09-12T18:15:52,567 else: 2023-09-12T18:15:52,567 filename = "" 2023-09-12T18:15:52,567 setup_py_code = "from setuptools import setup; setup()" 2023-09-12T18:15:52,567 2023-09-12T18:15:52,567 exec(compile(setup_py_code, filename, "exec")) 2023-09-12T18:15:52,567 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-s7thsmnk/molnet-python_b29459ae1d09448da037981b5dda08df/setup.py'"'"',), "", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-wnxv4ckk[/] 2023-09-12T18:15:52,568 [bold magenta]cwd[/]: /tmp/pip-wheel-s7thsmnk/molnet-python_b29459ae1d09448da037981b5dda08df/ 2023-09-12T18:15:52,569 Preparing metadata (setup.py): finished with status 'error' 2023-09-12T18:15:52,570 ERROR: [present-rich] metadata generation failed 2023-09-12T18:15:52,575 Exception information: 2023-09-12T18:15:52,575 Traceback (most recent call last): 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata 2023-09-12T18:15:52,575 call_subprocess( 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess 2023-09-12T18:15:52,575 raise error 2023-09-12T18:15:52,575 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1 2023-09-12T18:15:52,575 2023-09-12T18:15:52,575 The above exception was the direct cause of the following exception: 2023-09-12T18:15:52,575 2023-09-12T18:15:52,575 Traceback (most recent call last): 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-09-12T18:15:52,575 status = run_func(*args) 2023-09-12T18:15:52,575 ^^^^^^^^^^^^^^^ 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-09-12T18:15:52,575 return func(self, options, args) 2023-09-12T18:15:52,575 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run 2023-09-12T18:15:52,575 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2023-09-12T18:15:52,575 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve 2023-09-12T18:15:52,575 result = self._result = resolver.resolve( 2023-09-12T18:15:52,575 ^^^^^^^^^^^^^^^^^ 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve 2023-09-12T18:15:52,575 state = resolution.resolve(requirements, max_rounds=max_rounds) 2023-09-12T18:15:52,575 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve 2023-09-12T18:15:52,575 self._add_to_criteria(self.state.criteria, r, parent=None) 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria 2023-09-12T18:15:52,575 if not criterion.candidates: 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__ 2023-09-12T18:15:52,575 return bool(self._sequence) 2023-09-12T18:15:52,575 ^^^^^^^^^^^^^^^^^^^^ 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__ 2023-09-12T18:15:52,575 return any(self) 2023-09-12T18:15:52,575 ^^^^^^^^^ 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in 2023-09-12T18:15:52,575 return (c for c in iterator if id(c) not in self._incompatible_ids) 2023-09-12T18:15:52,575 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built 2023-09-12T18:15:52,575 candidate = func() 2023-09-12T18:15:52,575 ^^^^^^ 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link 2023-09-12T18:15:52,575 self._link_candidate_cache[link] = LinkCandidate( 2023-09-12T18:15:52,575 ^^^^^^^^^^^^^^ 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__ 2023-09-12T18:15:52,575 super().__init__( 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__ 2023-09-12T18:15:52,575 self.dist = self._prepare() 2023-09-12T18:15:52,575 ^^^^^^^^^^^^^^^ 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare 2023-09-12T18:15:52,575 dist = self._prepare_distribution() 2023-09-12T18:15:52,575 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution 2023-09-12T18:15:52,575 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2023-09-12T18:15:52,575 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement 2023-09-12T18:15:52,575 return self._prepare_linked_requirement(req, parallel_builds) 2023-09-12T18:15:52,575 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement 2023-09-12T18:15:52,575 dist = _get_prepared_distribution( 2023-09-12T18:15:52,575 ^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution 2023-09-12T18:15:52,575 abstract_dist.prepare_distribution_metadata( 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata 2023-09-12T18:15:52,575 self.req.prepare_metadata() 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata 2023-09-12T18:15:52,575 self.metadata_directory = generate_metadata_legacy( 2023-09-12T18:15:52,575 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-12T18:15:52,575 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata 2023-09-12T18:15:52,575 raise MetadataGenerationFailed(package_details=details) from error 2023-09-12T18:15:52,575 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2023-09-12T18:15:52,588 Removed molnet-python==0.0.7 from https://files.pythonhosted.org/packages/b4/68/10630f3d68007590a4ff0545559fabcde007ca5fbf02f1346d2c4d3608da/molnet-python-0.0.7.tar.gz from build tracker '/tmp/pip-build-tracker-oumnsrps' 2023-09-12T18:15:52,589 Removed build tracker: '/tmp/pip-build-tracker-oumnsrps'