2023-09-12T23:08:52,943 Created temporary directory: /tmp/pip-build-tracker-xyv59uju
2023-09-12T23:08:52,944 Initialized build tracking at /tmp/pip-build-tracker-xyv59uju
2023-09-12T23:08:52,944 Created build tracker: /tmp/pip-build-tracker-xyv59uju
2023-09-12T23:08:52,945 Entered build tracker: /tmp/pip-build-tracker-xyv59uju
2023-09-12T23:08:52,946 Created temporary directory: /tmp/pip-wheel-poy7i6df
2023-09-12T23:08:52,949 Created temporary directory: /tmp/pip-ephem-wheel-cache-6ixtbx88
2023-09-12T23:08:52,970 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-12T23:08:52,974 2 location(s) to search for versions of python-javabridge:
2023-09-12T23:08:52,974 * https://pypi.org/simple/python-javabridge/
2023-09-12T23:08:52,974 * https://www.piwheels.org/simple/python-javabridge/
2023-09-12T23:08:52,975 Fetching project page and analyzing links: https://pypi.org/simple/python-javabridge/
2023-09-12T23:08:52,976 Getting page https://pypi.org/simple/python-javabridge/
2023-09-12T23:08:52,977 Found index url https://pypi.org/simple/
2023-09-12T23:08:53,192 Fetched page https://pypi.org/simple/python-javabridge/ as application/vnd.pypi.simple.v1+json
2023-09-12T23:08:53,194   Found link https://files.pythonhosted.org/packages/58/5c/bfcc52002c9dfe5fe3bd067783243ab0130f59f757b0517f62f1ba7e88ea/python-javabridge-4.0.0.tar.gz (from https://pypi.org/simple/python-javabridge/), version: 4.0.0
2023-09-12T23:08:53,194   Skipping link: No binaries permitted for python-javabridge: https://files.pythonhosted.org/packages/21/52/7d9737c905264061f45e81ce57f6532c9e46462f0093beed4d4d72928600/python_javabridge-4.0.0-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/python-javabridge/)
2023-09-12T23:08:53,195   Found link https://files.pythonhosted.org/packages/0e/52/b444f826f4148cc741755a6b6adbd1707c01864e45359b8fdf3f67c71ebc/python-javabridge-4.0.1.tar.gz (from https://pypi.org/simple/python-javabridge/), version: 4.0.1
2023-09-12T23:08:53,196   Found link https://files.pythonhosted.org/packages/8c/c1/e553ceb6e71e0112d125d5a451390dc7df42962c1f67147a4c1d5b1938f9/python-javabridge-4.0.2.tar.gz (from https://pypi.org/simple/python-javabridge/), version: 4.0.2
2023-09-12T23:08:53,196   Found link https://files.pythonhosted.org/packages/5e/d5/78f75ee0a6beb51a606c50cc17d8f99782653f04dce6d5e12feaef089692/python-javabridge-4.0.3.tar.gz (from https://pypi.org/simple/python-javabridge/), version: 4.0.3
2023-09-12T23:08:53,197 Fetching project page and analyzing links: https://www.piwheels.org/simple/python-javabridge/
2023-09-12T23:08:53,198 Getting page https://www.piwheels.org/simple/python-javabridge/
2023-09-12T23:08:53,200 Found index url https://www.piwheels.org/simple/
2023-09-12T23:08:53,618 Fetched page https://www.piwheels.org/simple/python-javabridge/ as text/html
2023-09-12T23:08:53,619 Skipping link: not a file: https://www.piwheels.org/simple/python-javabridge/
2023-09-12T23:08:53,620 Skipping link: not a file: https://pypi.org/simple/python-javabridge/
2023-09-12T23:08:53,649 Given no hashes to check 1 links for project 'python-javabridge': discarding no candidates
2023-09-12T23:08:53,678 Collecting python-javabridge==4.0.0
2023-09-12T23:08:53,681   Created temporary directory: /tmp/pip-unpack-pnh1emyw
2023-09-12T23:08:53,929   Downloading python-javabridge-4.0.0.tar.gz (1.3 MB)
2023-09-12T23:08:54,340   Added python-javabridge==4.0.0 from https://files.pythonhosted.org/packages/58/5c/bfcc52002c9dfe5fe3bd067783243ab0130f59f757b0517f62f1ba7e88ea/python-javabridge-4.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-xyv59uju'
2023-09-12T23:08:54,342   Running setup.py (path:/tmp/pip-wheel-poy7i6df/python-javabridge_58ff51386ee3474c8d7328760adf08b4/setup.py) egg_info for package python-javabridge
2023-09-12T23:08:54,343   Created temporary directory: /tmp/pip-pip-egg-info-7ccl9859
2023-09-12T23:08:54,344   Preparing metadata (setup.py): started
2023-09-12T23:08:54,345   Running command python setup.py egg_info
2023-09-12T23:08:54,973   Traceback (most recent call last):
2023-09-12T23:08:54,974     File "<string>", line 2, in <module>
2023-09-12T23:08:54,974     File "<pip-setuptools-caller>", line 34, in <module>
2023-09-12T23:08:54,976     File "/tmp/pip-wheel-poy7i6df/python-javabridge_58ff51386ee3474c8d7328760adf08b4/setup.py", line 412, in <module>
2023-09-12T23:08:54,976       ext_modules=ext_modules(),
2023-09-12T23:08:54,977                   ^^^^^^^^^^^^^
2023-09-12T23:08:54,977     File "/tmp/pip-wheel-poy7i6df/python-javabridge_58ff51386ee3474c8d7328760adf08b4/setup.py", line 96, in ext_modules
2023-09-12T23:08:54,978       java_home = find_javahome()
2023-09-12T23:08:54,979                   ^^^^^^^^^^^^^^^
2023-09-12T23:08:54,980     File "/tmp/pip-wheel-poy7i6df/python-javabridge_58ff51386ee3474c8d7328760adf08b4/javabridge/locate.py", line 133, in find_javahome
2023-09-12T23:08:54,981       java_bin = get_out(["bash", "-c", "type -p java"])
2023-09-12T23:08:54,981                  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T23:08:54,982     File "/tmp/pip-wheel-poy7i6df/python-javabridge_58ff51386ee3474c8d7328760adf08b4/javabridge/locate.py", line 130, in get_out
2023-09-12T23:08:54,984       raise Exception("Error finding javahome on linux: %s" % cmd)
2023-09-12T23:08:54,985   Exception: Error finding javahome on linux: ['bash', '-c', 'type -p java']
2023-09-12T23:08:55,062   ERROR: [present-rich] python setup.py egg_info exited with 1
2023-09-12T23:08:55,075   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2023-09-12T23:08:55,075   exec(compile('"'"''"'"''"'"'
2023-09-12T23:08:55,075   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-12T23:08:55,075   #
2023-09-12T23:08:55,075   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-12T23:08:55,075   #   import from `distutils.core` to work with newer packaging standards.
2023-09-12T23:08:55,075   # - It provides a clear error message when setuptools is not installed.
2023-09-12T23:08:55,075   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-12T23:08:55,075   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-12T23:08:55,075   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-12T23:08:55,075   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-12T23:08:55,075   import os, sys, tokenize
2023-09-12T23:08:55,075   
2023-09-12T23:08:55,075   try:
2023-09-12T23:08:55,075       import setuptools
2023-09-12T23:08:55,075   except ImportError as error:
2023-09-12T23:08:55,075       print(
2023-09-12T23:08:55,075           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-12T23:08:55,075           "the build environment.",
2023-09-12T23:08:55,075           file=sys.stderr,
2023-09-12T23:08:55,075       )
2023-09-12T23:08:55,075       sys.exit(1)
2023-09-12T23:08:55,075   
2023-09-12T23:08:55,075   __file__ = %r
2023-09-12T23:08:55,075   sys.argv[0] = __file__
2023-09-12T23:08:55,075   
2023-09-12T23:08:55,075   if os.path.exists(__file__):
2023-09-12T23:08:55,075       filename = __file__
2023-09-12T23:08:55,075       with tokenize.open(__file__) as f:
2023-09-12T23:08:55,075           setup_py_code = f.read()
2023-09-12T23:08:55,075   else:
2023-09-12T23:08:55,075       filename = "<auto-generated setuptools caller>"
2023-09-12T23:08:55,075       setup_py_code = "from setuptools import setup; setup()"
2023-09-12T23:08:55,075   
2023-09-12T23:08:55,075   exec(compile(setup_py_code, filename, "exec"))
2023-09-12T23:08:55,075   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-poy7i6df/python-javabridge_58ff51386ee3474c8d7328760adf08b4/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-7ccl9859[/]
2023-09-12T23:08:55,076   [bold magenta]cwd[/]: /tmp/pip-wheel-poy7i6df/python-javabridge_58ff51386ee3474c8d7328760adf08b4/
2023-09-12T23:08:55,076   Preparing metadata (setup.py): finished with status 'error'
2023-09-12T23:08:55,078 ERROR: [present-rich] metadata generation failed
2023-09-12T23:08:55,083 Exception information:
2023-09-12T23:08:55,083 Traceback (most recent call last):
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2023-09-12T23:08:55,083     call_subprocess(
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2023-09-12T23:08:55,083     raise error
2023-09-12T23:08:55,083 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2023-09-12T23:08:55,083 
2023-09-12T23:08:55,083 The above exception was the direct cause of the following exception:
2023-09-12T23:08:55,083 
2023-09-12T23:08:55,083 Traceback (most recent call last):
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-12T23:08:55,083     status = run_func(*args)
2023-09-12T23:08:55,083              ^^^^^^^^^^^^^^^
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-12T23:08:55,083     return func(self, options, args)
2023-09-12T23:08:55,083            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2023-09-12T23:08:55,083     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2023-09-12T23:08:55,083                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve
2023-09-12T23:08:55,083     result = self._result = resolver.resolve(
2023-09-12T23:08:55,083                             ^^^^^^^^^^^^^^^^^
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2023-09-12T23:08:55,083     state = resolution.resolve(requirements, max_rounds=max_rounds)
2023-09-12T23:08:55,083             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2023-09-12T23:08:55,083     self._add_to_criteria(self.state.criteria, r, parent=None)
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2023-09-12T23:08:55,083     if not criterion.candidates:
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2023-09-12T23:08:55,083     return bool(self._sequence)
2023-09-12T23:08:55,083            ^^^^^^^^^^^^^^^^^^^^
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2023-09-12T23:08:55,083     return any(self)
2023-09-12T23:08:55,083            ^^^^^^^^^
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2023-09-12T23:08:55,083     return (c for c in iterator if id(c) not in self._incompatible_ids)
2023-09-12T23:08:55,083            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2023-09-12T23:08:55,083     candidate = func()
2023-09-12T23:08:55,083                 ^^^^^^
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link
2023-09-12T23:08:55,083     self._link_candidate_cache[link] = LinkCandidate(
2023-09-12T23:08:55,083                                        ^^^^^^^^^^^^^^
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__
2023-09-12T23:08:55,083     super().__init__(
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
2023-09-12T23:08:55,083     self.dist = self._prepare()
2023-09-12T23:08:55,083                 ^^^^^^^^^^^^^^^
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare
2023-09-12T23:08:55,083     dist = self._prepare_distribution()
2023-09-12T23:08:55,083            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution
2023-09-12T23:08:55,083     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2023-09-12T23:08:55,083            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement
2023-09-12T23:08:55,083     return self._prepare_linked_requirement(req, parallel_builds)
2023-09-12T23:08:55,083            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement
2023-09-12T23:08:55,083     dist = _get_prepared_distribution(
2023-09-12T23:08:55,083            ^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution
2023-09-12T23:08:55,083     abstract_dist.prepare_distribution_metadata(
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata
2023-09-12T23:08:55,083     self.req.prepare_metadata()
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata
2023-09-12T23:08:55,083     self.metadata_directory = generate_metadata_legacy(
2023-09-12T23:08:55,083                               ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-12T23:08:55,083   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2023-09-12T23:08:55,083     raise MetadataGenerationFailed(package_details=details) from error
2023-09-12T23:08:55,083 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2023-09-12T23:08:55,096 Removed python-javabridge==4.0.0 from https://files.pythonhosted.org/packages/58/5c/bfcc52002c9dfe5fe3bd067783243ab0130f59f757b0517f62f1ba7e88ea/python-javabridge-4.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-xyv59uju'
2023-09-12T23:08:55,097 Removed build tracker: '/tmp/pip-build-tracker-xyv59uju'