2023-09-13T09:49:11,453 Created temporary directory: /tmp/pip-build-tracker-fef0l594 2023-09-13T09:49:11,455 Initialized build tracking at /tmp/pip-build-tracker-fef0l594 2023-09-13T09:49:11,455 Created build tracker: /tmp/pip-build-tracker-fef0l594 2023-09-13T09:49:11,455 Entered build tracker: /tmp/pip-build-tracker-fef0l594 2023-09-13T09:49:11,456 Created temporary directory: /tmp/pip-wheel-8_x4cybp 2023-09-13T09:49:11,459 Created temporary directory: /tmp/pip-ephem-wheel-cache-zifvroch 2023-09-13T09:49:11,480 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-13T09:49:11,484 2 location(s) to search for versions of gemmi: 2023-09-13T09:49:11,484 * https://pypi.org/simple/gemmi/ 2023-09-13T09:49:11,484 * https://www.piwheels.org/simple/gemmi/ 2023-09-13T09:49:11,485 Fetching project page and analyzing links: https://pypi.org/simple/gemmi/ 2023-09-13T09:49:11,486 Getting page https://pypi.org/simple/gemmi/ 2023-09-13T09:49:11,487 Found index url https://pypi.org/simple/ 2023-09-13T09:49:11,748 Fetched page https://pypi.org/simple/gemmi/ as application/vnd.pypi.simple.v1+json 2023-09-13T09:49:11,848 Found link https://files.pythonhosted.org/packages/3d/74/21e7705118e1f4ac86f03f99a71dc2ba33b8a73fef727be638ee054886e6/gemmi-0.1.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.2 2023-09-13T09:49:11,849 Found link https://files.pythonhosted.org/packages/13/89/4369460dd34f3e7f46c4ec44765cf9f79e392cf3faa8b3792285db77c61f/gemmi-0.1.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.3 2023-09-13T09:49:11,849 Found link https://files.pythonhosted.org/packages/fb/18/819ab7731075516bb422586a97a4e59313259fa60e49642e26859fe0ef76/gemmi-0.1.4.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.4 2023-09-13T09:49:11,850 Found link https://files.pythonhosted.org/packages/d4/d5/85a0fecb747b415fcc6e3fee9f48edab936e6339ec50736abe1dcfc0d460/gemmi-0.1.5.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.5 2023-09-13T09:49:11,851 Found link https://files.pythonhosted.org/packages/e5/96/664c971ddae50eb00ff9ee39ce8db4e3f481a1ca740583081a1a84146d39/gemmi-0.1.6.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.6 2023-09-13T09:49:11,851 Found link https://files.pythonhosted.org/packages/e5/41/e51478a35846a23ef2764d9a36ced90e63eafd49c7a4c85559b0566c3884/gemmi-0.1.7.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.7 2023-09-13T09:49:11,852 Found link https://files.pythonhosted.org/packages/20/bd/36cb4b950bbe78d5a4e3fd1c127100894fc97d059db57771fa1fd1ce9f2b/gemmi-0.2.0.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.0 2023-09-13T09:49:11,853 Found link https://files.pythonhosted.org/packages/d1/2a/7cb4d0fbc88af06fe42971bfebbbefa670a156b396a9d59fb428809977c4/gemmi-0.2.1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.1 2023-09-13T09:49:11,854 Found link https://files.pythonhosted.org/packages/09/bd/2d15c8e32c28b11d3f781293a3c828834874bf0c17d193a65a0ab4e781df/gemmi-0.2.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.2 2023-09-13T09:49:11,855 Found link https://files.pythonhosted.org/packages/2b/d5/15ac654339e17b64f6c4c3d07cea51f6f329eeee1ba01ad58536279fd400/gemmi-0.2.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.3 2023-09-13T09:49:11,855 Found link https://files.pythonhosted.org/packages/32/fa/781063687c6e47133a8c39b142a10573546153dde6f5558e9802690bb184/gemmi-0.2.4.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.4 2023-09-13T09:49:11,856 Found link https://files.pythonhosted.org/packages/8b/d5/92f78ebb4734212283301730b193bd44f3ea74161bfd413939a88e976f67/gemmi-0.2.7.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.7 2023-09-13T09:49:11,856 Found link https://files.pythonhosted.org/packages/4b/4b/51d357ef35fcf27a5325426b9326498ab1482be37efbc06a92202f921407/gemmi-0.2.8.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.8 2023-09-13T09:49:11,857 Found link https://files.pythonhosted.org/packages/e0/9c/6ea8ea2bbda7ab9eb8b548d899cc328aabd9cf04c720e1cd3287fcd00544/gemmi-0.3.0.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.0 2023-09-13T09:49:11,858 Found link https://files.pythonhosted.org/packages/e5/ed/6a91e0fe126a30842c93bfa3865dab81d8383a12026c034edfdf5bf60f85/gemmi-0.3.1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.1 2023-09-13T09:49:11,859 Found link https://files.pythonhosted.org/packages/5d/86/6cef13dcfd9b5f3101e826f35fd54088942496489b9307480185fe63d2ed/gemmi-0.3.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.2 2023-09-13T09:49:11,859 Found link https://files.pythonhosted.org/packages/af/9d/ce0bdf384249da75e4584b624f5a144366a3c8eceff2dff19236aff08dd1/gemmi-0.3.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.3 2023-09-13T09:49:11,860 Found link https://files.pythonhosted.org/packages/b3/b8/1f41f9a0849c5011cb890f89b6548c8dec1b52ee4bf28cb0ebe3728016e9/gemmi-0.3.4.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.4 2023-09-13T09:49:11,861 Found link https://files.pythonhosted.org/packages/f4/f0/f4cd4d29e53707efccb2e6d4b2c185851dc1ef02f7aa041b9803fb1a8590/gemmi-0.3.5.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.5 2023-09-13T09:49:11,861 Found link https://files.pythonhosted.org/packages/39/b1/9ca0ad395150af606cf85a2e45c2dfaab02492d36ff264efdcf25f7479c1/gemmi-0.3.6.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.6 2023-09-13T09:49:11,862 Found link https://files.pythonhosted.org/packages/99/ff/0da30f43421b952256ba77edf0eee9bc0711715a4687489ee33037a1f132/gemmi-0.3.7.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.7 2023-09-13T09:49:11,862 Found link https://files.pythonhosted.org/packages/06/4f/5e2e02aa93bcdf27b54f810ecda6e3d08b962d8ef27c9fa731f04523dc80/gemmi-0.3.8.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.8 2023-09-13T09:49:11,863 Found link https://files.pythonhosted.org/packages/c0/4d/7567aed9911e6f62021508d72deae27d7f1e5dcb41032c4d642c01158408/gemmi-0.4.0.post1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.0.post1 2023-09-13T09:49:11,864 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f5/da/3fb440c7b946febcc4fdb3f4928b1e93b2627ccdf26d69962f3c05b8f077/gemmi-0.4.1-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,864 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/88/8c/72cd48a1e89ad92f24e67d15545b9e3f478f256fb4729dbbb4985a0efe2f/gemmi-0.4.1-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,865 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cb/84/0162cc2197241200740655ebe6cfd33342ddb152feca089f98aab91f56b0/gemmi-0.4.1-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,866 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0f/3a/c69ec458774b60d61a929ac2357d0b9c0a0b5187e55cdb75e138cefee2d3/gemmi-0.4.1-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,866 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c2/a2/55410bfd6be3391475c2a005fcde251f843e0d117707dacb07bb880d2b21/gemmi-0.4.1-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,867 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/a4/361f66459b444340a29c1dbeb81918dccfab580f92752571a361b53c80fe/gemmi-0.4.1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,867 Found link https://files.pythonhosted.org/packages/2f/d5/4ca93e1691bd8cb2d1e06ce4ff816eca300aa4e09416caf45bbb6451f013/gemmi-0.4.1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.1 2023-09-13T09:49:11,868 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/22/03/599bf3752327fdbc408133daf5d6a7b950d72c4d81f20d8d3b2d8e95be85/gemmi-0.4.2-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,869 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c4/aa/f03b573d7333211fda34ad2c7dddbb4b7310fcf9caf7e938318208819049/gemmi-0.4.2-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,870 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/34/eb/d55b627cd8cb0f9bd3fc076afdd8b3b999316d6c4c24b6b703b97730ffab/gemmi-0.4.2-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,871 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/da/6a/fe1a65806633ea2129507b0f8b4034afdbf383e474a12152839ee50a52eb/gemmi-0.4.2-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,871 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/10/59/a4976acb0891bc600c161f08c341666daf419885f07a105e335e1aeeecb7/gemmi-0.4.2-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,872 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bd/f9/0e3c3e3cbb2116fa23a1fe815542a971a5775cd7ada9d02ffd5d58fcde85/gemmi-0.4.2-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,872 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f3/95/85635908935957b4ccc1700dafdcd0c309e00a4a3291aa7a8d6c65a5f089/gemmi-0.4.2-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,873 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bf/5e/2dcb2454003be5505eb7a75b5eecde74486d2a1bea2f189fc30c749076e6/gemmi-0.4.2-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,873 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3c/8d/055161b661f3dcebbd1cfa3c55ba02ab7f434d87147481b3566080a4ccac/gemmi-0.4.2-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,874 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ce/82/a45cb30c350b56f4dc628986b84b91310b88e1b2ac73ae3b37c3a1ac8585/gemmi-0.4.2-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,874 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9a/39/784a739b8d83175667ef1cc85a53acbe79b9437292031225b3ed552bc035/gemmi-0.4.2-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,875 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5b/62/8911a99982bc95e629f41a7096f0f907cf4b001ed6c0087e0a2763c943e1/gemmi-0.4.2-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,875 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/95/9b/d75a5882a9bb13d47e99e0552b516e330004b411e4547b37a3743c74976b/gemmi-0.4.2-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,876 Found link https://files.pythonhosted.org/packages/a4/ac/b850ac03ad0f899c0c8f699af60b5c515291c74470601e3b12803d6fca2e/gemmi-0.4.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.2 2023-09-13T09:49:11,877 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/23/72/c5e726b2722bdfbbb82847582ff64caaf60f70ca38adf11946561fbc75ce/gemmi-0.4.3-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,877 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b7/cf/5a9f3534db7e32658104b69e8a631c4fcf9a4bff7b8d38dca572bb6ed5d7/gemmi-0.4.3-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,878 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d4/8b/c55499a4d0d2a155c4c4ce220a2a942f0026909f4ec849609fc6688eb5a4/gemmi-0.4.3-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,879 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c3/c4/d3239cd44ce93e14454e2f6596a723f5245776fe822238ac0473ef6d81d4/gemmi-0.4.3-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,879 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7c/b9/4821a0951160692524e8394629b952337ad0fbe111b5cf26dc56a9c8e59e/gemmi-0.4.3-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,880 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6a/52/e2813c31a8d080649737308823e85d17324defb683a61e853beea00ed63e/gemmi-0.4.3-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,881 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b1/91/659f69913777cc1fa590f25f5831d9803c9681923690e426af680d9380cd/gemmi-0.4.3-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,881 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5a/c9/e78fbd8a8d48f13c9da4e6afc4941bbf40142e6423d487335f8fcf46e2db/gemmi-0.4.3-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,882 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9e/6e/0ab2f8a07c42a54d6e6fda65549ff13a081c94601f084f795a380a8f14d2/gemmi-0.4.3-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,882 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/dd/43/aa263331953f26ee8cf573129576a87252c4667686b04280e2e2d46a1ef7/gemmi-0.4.3-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,883 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ad/37/dd827724ae053469469c4dc3f050b5b16093195fa50030a202a593fb380a/gemmi-0.4.3-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,883 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cd/15/4460162edf9aea5c568b6fbdf2b55536800b32e639064db8fb112c779edf/gemmi-0.4.3-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,884 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4d/35/e8b97d567e27090876330931af7a5f097aed5387067718a25a9d4225ff82/gemmi-0.4.3-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,885 Found link https://files.pythonhosted.org/packages/b7/6b/b4c5c2c12da58813f2478fdffac17d86aaf46c570b6f8b42eef9778d8180/gemmi-0.4.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.3 2023-09-13T09:49:11,885 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7a/88/e074befd61f9abbc617edd24283bf642869882c023b2da5cf78bbbe8b967/gemmi-0.4.4-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,886 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/74/f0/47da82d4ba10f1d15a212d74c9d712158b994bde8115f9d6d01f5c4ebe6f/gemmi-0.4.4-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,887 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1f/b6/28f2a87d7e189fe9604897e13fd05a881a7933d7d293fc04efdbc6ad436b/gemmi-0.4.4-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,887 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/89/06/0c6eda981f85fb5f1633d19c8ce0cbd2d8fcf5677b5d563740241737ac90/gemmi-0.4.4-cp27-cp27mu-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,888 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bd/66/c696b84cab12dcc9c41f4d59eb767ed681359a0eafd331d9dfe5bab42b8c/gemmi-0.4.4-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,888 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1b/ed/d6745f20401fa9383ec0f166120c8f1d569795d5dc75601386e9811e587e/gemmi-0.4.4-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,889 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/dc/18/0b5127d8f84979f371d588a323047483a22604eadb457ce9cee709895f29/gemmi-0.4.4-cp36-cp36m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,890 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6b/62/eea9c84d0e37df89b34c03b562522556419c080462c92eede3ccb9697625/gemmi-0.4.4-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,890 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4c/62/78cbc5c9e8f68a84547621a5d42ae22560c0215f918a6c8e007835a59e8a/gemmi-0.4.4-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,890 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a8/86/7258f7f4797308e3750c30ec16d9850dac8d0e865fc1d2fcd18e345ff82d/gemmi-0.4.4-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,891 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a9/44/c8cd594bc8075226ec1d38c330eb412650e75d9899db7c160b96b788fe5f/gemmi-0.4.4-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,891 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4c/68/832c4428629c200710b73ab360bbf3cbbe7bdff439618e06c136efb083a4/gemmi-0.4.4-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,892 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c5/02/b1edf3ca6e2bbc04d5bf9223ca53571a6dec25156b708bc4303352f4f8b1/gemmi-0.4.4-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,892 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/13/2f/37bbe81cdad4ad391102f85f660dddc3b9c69a9babb79edf7a546bb00a34/gemmi-0.4.4-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,893 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e0/3b/624099e50f36dccf6adf402c5c30f8aa788a29e7a7daa0814ffc2b029438/gemmi-0.4.4-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,894 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ad/e6/54a757bb93d5e818d3c2a9a2c78c4ce2d929831e82248e2bbdfc8b83a5a4/gemmi-0.4.4-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,894 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/61/12/f0e468abe27ca297d48739409f91ae7c8316179eb46e7d6566ef6f8531f0/gemmi-0.4.4-cp38-cp38-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,895 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e3/25/f86bf28f87680c7acfc0366eaeef544af75c17480777e9572f845b73a9ae/gemmi-0.4.4-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,895 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0f/0b/5ed3cfbd0bc92abf4bed4dd765ed5c3aa639ff2500abe9855c6178f4a8f5/gemmi-0.4.4-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,896 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/84/54/78bf9f5257e928db4a5c3464ac0258b2e7c8ddfb01103dd2278bfc996a1c/gemmi-0.4.4-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,896 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fe/73/b1274d1b4e946992e17c6260498e2538744eb33003b17d9d9a8ee0560b32/gemmi-0.4.4-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,897 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/39/44/e9f31da6e5d63564620ccdfa8fbd811a7056d0ea114874273a8357b14284/gemmi-0.4.4-cp39-cp39-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,898 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f3/3e/d823ff5a6fa3dcf98a6460ee281c82f73c384f27467d869018b674aa7636/gemmi-0.4.4-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,898 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c4/14/73eda6090c1a6062c6428762e3b722856dada25bfff509532ccd1b039c87/gemmi-0.4.4-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,899 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/84/f7/2b4825646ab5c6afaa50858c97267cbc2b234b6e99a43d956924c6518f0e/gemmi-0.4.4-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,899 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b5/34/8bdb8d15ead8117585bec881c80a62983fbd74ebc1b08bf164f15d5f97c7/gemmi-0.4.4-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,900 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ca/14/dd376612fc3899f68d83d60d1988f89402dd0c8f4a7010006b2f567f0d71/gemmi-0.4.4-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,900 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/95/39/e1cdaf64ff7d3c7c7b7e186e3f9f32b9957dd9644263e0879555cc2aebe4/gemmi-0.4.4-pp36-pypy36_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,901 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e8/37/89532fece5b13a637174902bf5719cc6546c77b19b6a26e0292fc7cf8898/gemmi-0.4.4-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,901 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/68/be/1dbdfd3831075a2920c4c3cecb9178dba6f270d77995c773d65a8e16a701/gemmi-0.4.4-pp37-pypy37_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,902 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f8/7d/3c1fab59be120cdfb4d5f2500b58864c55467381533564babcd43f8fd012/gemmi-0.4.4-pp37-pypy37_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,902 Found link https://files.pythonhosted.org/packages/50/93/11e3197ee0d201256c63faca3023f68eb50823f4f0d3dd15c537fce89cc9/gemmi-0.4.4.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.4 2023-09-13T09:49:11,903 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a3/89/62715a67fdbec732441eefb9ab39bd62f7f43334ac4015b791b977be68c5/gemmi-0.4.5-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,904 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b5/39/c38fa021a44e9343cc886722365d453cf364e2a5a67c285bb328b20ff540/gemmi-0.4.5-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,904 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f7/18/b755993b408896b60e4852f9107331006a1b99c83926a948c9b4b27aab32/gemmi-0.4.5-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,905 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/57/51/0c582b5adc6cb799a6b87766c498fe7144f792cba2c70b6e4ff31542e874/gemmi-0.4.5-cp27-cp27mu-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,906 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7c/a8/12c264b0b6d417ac551fdceb2fd5ac3e0bb2e2a83f4931c8f86135b2df4d/gemmi-0.4.5-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,906 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7a/b2/660f35b80809bd4f75f2b8f5dd356f1b3b3ee6b999e6811743c68c0dc308/gemmi-0.4.5-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,907 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/55/44/f25c57803987a15bea2c24d638da47e8e778fd53acb194e1757523778938/gemmi-0.4.5-cp36-cp36m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,908 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/09/9d/58f15c2552bfc071f973eec23499c9d6a1b8dc0ce60c7997e49a7402ec91/gemmi-0.4.5-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,908 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0d/f0/bfa6c95e9071a4061d60c1240f6d5c1dccec497bfbc4a78e9dd0d5d261fa/gemmi-0.4.5-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,908 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fc/11/448e121ac8ac7217b6f7cc570a6d26bc51d27858c78bc533b6c2a7640b8e/gemmi-0.4.5-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,909 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c0/72/77ea0f799d73d54999181ddd615206492343ada2617996f7169acab168ec/gemmi-0.4.5-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,909 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c0/0b/52ea2dd8bb3d311e441674a79cee4dd490140865595473cb222096c8cdc4/gemmi-0.4.5-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,910 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/04/0d/a91f70f43b8a0732f82739b3abac31fc6d363c229395308205b87d383045/gemmi-0.4.5-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,911 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/72/1e/57b1c8dd3d6b918198328579e69ce68f7b0df2d7021fe9b7dac55d7e9cb6/gemmi-0.4.5-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,911 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/54/26/3683d8c49bae1ee13b96911f28006a90163eb65778695c2e67939c4bc37c/gemmi-0.4.5-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,912 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/69/e1/b12f90c4962282c329afdc1a4c9cb7475dda068ec1e0a815209010621c83/gemmi-0.4.5-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,913 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/49/90/276372a683c5687081103062ebc8e535181d9eff9ecf4eee42c9081be19f/gemmi-0.4.5-cp38-cp38-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,913 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/65/e5/da6409d8b6d9850036c3ef87e460336c6231b1e0c3bb95f34dd0aaf3836b/gemmi-0.4.5-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,914 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0f/8e/1764f1045f32c0bfb1d2901ac8b75fbe97e1e392b355ee9af815cf38ef57/gemmi-0.4.5-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,914 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e1/2f/73a7b609eac9a9c71e7bff951c2e100e407da14c5a214dc18eda13eb4141/gemmi-0.4.5-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,915 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/12/d4/4208b738e30605318d8f26090bc4380846040f98ded22271e7e4ca46d2c5/gemmi-0.4.5-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,916 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/af/ce/ab46b8088defeb988d95646598ba860a8a627231198d45ce61a3605ba00b/gemmi-0.4.5-cp39-cp39-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,916 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/43/2c/663a099339e2bc8294891757038496434774ac16c65a2798cc431e206a55/gemmi-0.4.5-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,916 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/78/f1/13a68d2f9a11b3664e0e1de4d79326cd67862bca4f5c49ee4bef2514b9db/gemmi-0.4.5-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,917 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e5/82/f72b3028dd1a01369dab40d8943011dd96bd56d7d019b848b9545345a50b/gemmi-0.4.5-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,917 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ee/6c/c0b2f77136489e9aada94adf29c586fa51e982d63cb162b71f598aa52e4a/gemmi-0.4.5-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,918 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2b/62/0b7d622c7961f0df3818fd1e56d398c7c723ddacb9eaf864d1c729fc8e22/gemmi-0.4.5-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,918 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5c/b1/c48b5b6c866bc104ad5ad0667d4133d9185a982928235270332fb8a21436/gemmi-0.4.5-pp36-pypy36_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,919 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ac/13/721e4b76e5db2f9549ba22f0c42181d25c936a9a7d17ad2640aaf91ee38e/gemmi-0.4.5-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,919 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0b/e5/ac1318a6fdd197e1a1b039658efb59afbd1abbb44ea9789fd0c6b9b49724/gemmi-0.4.5-pp37-pypy37_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,920 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/bf/c3c250e76b72ececf8b9b4c46c5d53bf2f321a97137bda5c791061b2eb4d/gemmi-0.4.5-pp37-pypy37_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,921 Found link https://files.pythonhosted.org/packages/cb/de/3009e2c600cdface74bc3cd3a61abe573a1795494884caabce654f7d9b67/gemmi-0.4.5.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.5 2023-09-13T09:49:11,921 Skipping link: No binaries permitted 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2023-09-13T09:49:11,924 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3d/74/b4ea05a4bf76367e0ad27b4c5bc02c2ed31c32bdd2386378d72c90175c59/gemmi-0.4.6-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,925 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ac/10/23fa05a07b6df83608aa59cc238f74e84d8058ad2ae310bdbb47d1c81f85/gemmi-0.4.6-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,925 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9c/55/e8ba86967640ea9c436a8dda39164837d45e7ee5f7fe6688ec9e52ceec81/gemmi-0.4.6-cp36-cp36m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,925 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/74/03/7cd6b99f2d8ce8ac485e7550e476ff0d752b5743486de3a953ba162f8ae7/gemmi-0.4.6-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,926 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ed/2d/e80e5393bfaea7be595bcf6ace407e0042b28496e510b38395476c9a7836/gemmi-0.4.6-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,926 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fc/1c/1ebdff39cfc9cecab2445b22e1b480d458c253dac3e9017c3d76451e908f/gemmi-0.4.6-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,927 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/94/f0/1a405fed888d6d3aba90bfcdf11b6e12655202b728ff2a035e3f5ff11297/gemmi-0.4.6-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,927 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/51/51/71162451f2e331bd46c154b2673f38823559e90989d5e5c1196f8fd9565b/gemmi-0.4.6-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,928 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4b/29/d5b7a27bad71957f41c644c3c19637f0d9fefabbbc4c501cf6be1eb0537c/gemmi-0.4.6-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,929 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ca/e8/506e69e5caaf93daf0e9429f2379a16ff07d39b76916944f492d7fe369a0/gemmi-0.4.6-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,929 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a9/21/cd910ccb94c96cc6608e109eead1645be18715b4699382aae51604464b71/gemmi-0.4.6-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,930 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/78/df/e72a1f1be72b6a3ff8f4def21ec8b31ac56c77bad1b871386fc8028115dd/gemmi-0.4.6-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,931 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/56/cd/c2fe5e0c0673c734db137d12d45ade2a16de88a68772926ddff4ce230ac6/gemmi-0.4.6-cp38-cp38-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,931 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ca/08/607d0949bb3e508feb63d71dcb16c8cc54b146d5d020e228b90db69f44c0/gemmi-0.4.6-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,932 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0e/cd/df5f9d994a9b20ea68cc6efb0892011d870db72ec985c77df6298f3ca836/gemmi-0.4.6-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,932 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1a/4a/6a4e5db1bdc3be1a1cb6c0c21193d981ea5fa2991058b4ceb7454a9cb520/gemmi-0.4.6-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,933 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/75/1b/306f7baf0785078f809c12c85652537545fc0f3320c914371ffc712f19e3/gemmi-0.4.6-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,934 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/da/d8/c37aa4a871b46ee81ffc34ffa612f917fe5ec1db64245cb4d050e5d0b827/gemmi-0.4.6-cp39-cp39-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,934 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ec/94/8d880d7694f846d9a480b504e4cc4f121055b001e6d2d9070102782bde74/gemmi-0.4.6-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,935 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/07/ef/2b5075478d09a0c9a688507124642f7e8a99d51d46c6a8dfffc9a9d9ff8a/gemmi-0.4.6-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,935 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d1/92/fcae326c99c89b286efcba8cd0c95e125f6ba909c2550ab23ad1e8377cc0/gemmi-0.4.6-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,936 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/24/8b/e39db36831a95644e89dea92bdd451ec6568b4e506ff9c2194cafd38d56f/gemmi-0.4.6-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,936 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7c/0a/d8cb7a05a6e3f199e0363e61e8cfc369820ea6adc84affc94a9363dec59f/gemmi-0.4.6-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,937 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/53/fa/89eabf0dbbaf91fbfc99bffcb3d603474bc6cd1ef9615e3f3213cd0cfe9d/gemmi-0.4.6-pp36-pypy36_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,937 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/85/de/a01cc76fdb904af071b74b404daedeedb9fd215609f18e2104e9ec42cabb/gemmi-0.4.6-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,938 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f3/c0/22d5631bb9cf8af0c9a613987e4adaf670730c2af9878dcd49a8503aece8/gemmi-0.4.6-pp37-pypy37_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,939 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/79/86/a7bd5d5c766a719319244373bf8e455bf85993e67230341de9be0b3631d8/gemmi-0.4.6-pp37-pypy37_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,939 Found link https://files.pythonhosted.org/packages/ce/18/3fd50934956b378006bbd12cde768c35dd55c7f5359e82c8680100da07a4/gemmi-0.4.6.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.6 2023-09-13T09:49:11,940 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9b/86/cdff573b699036edc8ca9f7d83f3f40736ef17ea79726e1b2de7debcd72e/gemmi-0.4.7-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,940 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1c/6b/786e51debc4e0e199c67fb5a00972f02c6b0e01fdbf6ad19b726fba6a669/gemmi-0.4.7-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,941 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0d/51/99d207e130a212b2bccdc179a4e78a8ceaade11f5ee15c2f4ae3f6d4ecf2/gemmi-0.4.7-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,942 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a2/cd/2fa705d106c5c08b541db9c65bb12f237930bc504995c04e055e8f8c2a50/gemmi-0.4.7-cp27-cp27mu-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,942 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6e/1d/85b0771c0235f82fef9df78050e5b22c8b92f89a587af1b4b6b5738fd94c/gemmi-0.4.7-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,943 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5b/05/20ac362a07e783d571cc65efaf1b3ee539ec28e73985da6a059252b620e3/gemmi-0.4.7-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,943 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/04/af/06d6cd6ce75983ccf4076846eaaf4a586964cfe121f3f767f7d7891f6bfe/gemmi-0.4.7-cp36-cp36m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,944 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a5/61/c8e2ec5bd6d1b6288aa541edc603f43f9248a83f9ca470383d739d7d7adf/gemmi-0.4.7-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,944 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bd/c5/83d1c9084eab480c13849462e0f211d74d2aaefd0832e33a42099e4dc7a4/gemmi-0.4.7-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,945 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c4/b9/f336e9522b8375f5e3ca8f02da39a1b3e5a62aa062ca63136c267a69f2ba/gemmi-0.4.7-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,945 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b3/54/4c0dd5642138b078b208fcd9600fc32e2d412b8945bc5b82fc74cbef20fe/gemmi-0.4.7-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,946 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/25/91/ba6367b2cdd3e7ae0400acecb3a8b9ec714a03850eec8023aa41f6124ff7/gemmi-0.4.7-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,946 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d1/62/5e843d8e0706d9a1afadad6d8154e837f885aeea77ce72b55a7d88fe5cb3/gemmi-0.4.7-cp37-cp37m-manylinux2010_x86_64.whl (from 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2023-09-13T09:49:11,953 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/32/48/f29a0b98b00d7f3a3cf6b7b194f77eab3cbb83a630be8cbc4fdb2d23ff04/gemmi-0.4.7-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,953 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9b/9c/f6426743545f32e53190ca22d524819dff6b24ca98fc5c164da1db23f6db/gemmi-0.4.7-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,954 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ab/07/ea64580e7ed5ce8f2d1db56bf901e9d169d58d4dc52061d5453f6947b8ef/gemmi-0.4.7-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,954 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:11,957 Found link https://files.pythonhosted.org/packages/1a/6a/57ab433972758026e23b70317c45e6dd3d8d5e3b613395222cfc1c66f8e0/gemmi-0.4.7.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.7 2023-09-13T09:49:11,958 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e3/09/d16e2f83de54713c5be0b634de276a7c7f6e2edc4b68acdd8f55973d1fbc/gemmi-0.4.8-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,958 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bc/7b/a0f6d52641d618fca00d462d3ea38164a3d2abe6ced000f01b804975b31d/gemmi-0.4.8-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,959 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/09/bf/081a34019f66d66d4821f790ed3ce0f13f19ab1a1bad9c9867011848465f/gemmi-0.4.8-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,959 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e4/f5/3dc5d9b61ebbc6f491aadfdfd0bce5266173a6961cfaa8c222c39fa54474/gemmi-0.4.8-cp27-cp27mu-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,960 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7b/14/6a75536f7309e2b90fbebd8f71236725f69de274a2ab14be1aa087c7ef42/gemmi-0.4.8-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,961 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/49/44/ea1a52fee634b16022f8f9111d2906f5e34debc4c2ee42aa85d0e5699fe3/gemmi-0.4.8-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,961 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7f/3e/0bf25e2a04b65efa4a2201b28a20d7db1a8bb553651d29b8b4bfdc808bd7/gemmi-0.4.8-cp36-cp36m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,962 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f8/94/4b6a2f54607f925bee432c31bca7148912f73a76065349100b30f4e1b7a6/gemmi-0.4.8-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,962 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b9/e6/4dae5ab0096e2e7e2e1d6deda674752991a59bd0b40bac7d15750f201fae/gemmi-0.4.8-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,963 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5b/5d/b904133fddc14b69650969f26adf4475c61dd6afddde5915e8f9a1a908a4/gemmi-0.4.8-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,963 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c6/66/c5d99fd508028ac16185206845a30e077d6a50e696d70f4907763bf8604a/gemmi-0.4.8-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,964 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/15/9d/2625a39a3b865592dd6625e6ffb15a8f8db73b4b6e6fb4579a01180ac7a6/gemmi-0.4.8-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,964 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/38/67/04678d6d5c1e221db2d2c454ebd191f1e64426925ac78c74b776923cb17b/gemmi-0.4.8-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,965 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/85/2d/550fc0225d8ee08fd7bdfb0c9afb2d813aed43f7c425bba49f74a91f1432/gemmi-0.4.8-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,966 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/52/a8/1b28d920aadbde1846187d57f9c5ba330407251ebe3d7c309e1fdabcf406/gemmi-0.4.8-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,966 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b4/bd/ba247f570a39e762d764c0331543b3043cf64f5f0ca36bced858487987db/gemmi-0.4.8-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,967 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5b/0b/7967a09be146cdebee17333fc3a4dfd9f0e43f6f6ab41c84fa710d8ed96b/gemmi-0.4.8-cp38-cp38-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,967 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cf/bc/5f1924a4857563dcf10cea63b40033966f333866d5243d1c30fec71a18f0/gemmi-0.4.8-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,968 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/41/e4/a26be690bb45b77fee54288dd81f34e10bf30efe81ae6a516dbd15d6a4de/gemmi-0.4.8-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,969 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0b/b2/25bea6fa2c21d0c27a397eb40f4818d34693be00926af93e5bbdc605660d/gemmi-0.4.8-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,969 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8b/69/ee81c98ac6998e29cf1931b341320a4d65f694c6a095adbff7821c085a11/gemmi-0.4.8-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,970 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e1/c5/eccf26a655b44740191e448ab62723e73d9d8101fb7cb61e9ae612f50772/gemmi-0.4.8-cp39-cp39-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,970 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/91/fb/02cddcbd54aaf2bf654984d03228e3ee2fbe3aedd632bc9d8627ef27cbcd/gemmi-0.4.8-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,971 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7d/68/d6aea40eabf9be195acb7d626ba502c74ee2dee946630e72239a9cad1a81/gemmi-0.4.8-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,971 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ff/15/2b20579d523b79117297458866daa67deed9bb3ad93ef94dce78d57c83ad/gemmi-0.4.8-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,972 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/97/34/5c0e1a3c55b929a6f001cc57407cefa673bda7202b449aab8b0d94de96a8/gemmi-0.4.8-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,972 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d6/34/367588c79586d6d659f1783bb7db682f15bfe2c4dfe14a418a763f972719/gemmi-0.4.8-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,973 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f4/3a/d3278fc9583de3e8cfb6db2692ee91fe9551046274e4c561ae9ee82af8ca/gemmi-0.4.8-pp36-pypy36_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,974 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/30/53/9123f651bede3b9b5c3c926aef95e4f628f7b460f709230453bc16557df7/gemmi-0.4.8-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,974 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0a/8d/211a30f8c8f27b313e2d51e0374a642bda020689f5bbcfe3003d13601b76/gemmi-0.4.8-pp37-pypy37_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,975 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/11/c7/de6f582a7878895741ede91da2d7e4f104c72404cbc5d7bf56b1ae8be6e8/gemmi-0.4.8-pp37-pypy37_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,975 Found link https://files.pythonhosted.org/packages/be/6f/e45033469acdf0b06ae8451488de7619952e889cc4a7deed73e3c6df3cec/gemmi-0.4.8.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.8 2023-09-13T09:49:11,976 Skipping link: No binaries permitted 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2023-09-13T09:49:11,979 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/91/c1/e3a3dda52195d2256e18deaeba42d1ff8870cc2c856f912e3d92d5286419/gemmi-0.4.9-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,979 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/91/86/7497f5f70a47af921e946978c282d41f6d6e48aa7cba7d9e48a91665674f/gemmi-0.4.9-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,979 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d8/4b/12cda0c8a94cf6f5424ecb640e97e53bf3c9ed9bc714ecf6f5da73acf356/gemmi-0.4.9-cp36-cp36m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,980 Skipping link: No binaries permitted for gemmi: 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No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f4/70/52c43c2a25e9394b8e21681b1914e2d31c2f5cb5b8c072dff1aaa9448b28/gemmi-0.4.9-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,983 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a9/dc/59a7a0c5c4f854f6e1adfce5699f1ebcfe6393632c218238a5a31fa0599f/gemmi-0.4.9-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,983 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a2/cf/b3ac2fe6712a13eb3faa131256a79ac2d58a46add4912f09a029102fda67/gemmi-0.4.9-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,984 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0b/79/a9f847512b292ba6a2718a87ac54090d9af14b7bf54ac874ff100122dd8f/gemmi-0.4.9-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,984 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3a/23/46a9343185dd2760a81553627971daea3d2af7e5762585b2234f111cefd6/gemmi-0.4.9-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,985 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e1/e1/d92de9990dd38683f20dba5974b7abff16748fe7dafe93693c9579ab64a3/gemmi-0.4.9-cp38-cp38-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,985 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4b/e7/f29a3313d0f0ebb7cb7f30157f5e72360811dfe3967e54d908156155086a/gemmi-0.4.9-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,986 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/50/c8/52ad765f76e715a19ecd1b05d6b2f61e3022037343fdd21ac596f8b61ef0/gemmi-0.4.9-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,987 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4d/2e/8a73d84362328ea3326470970f038a015a4dfd239c7416f66bcd09e945b6/gemmi-0.4.9-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,987 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fd/40/38935fe474a830829060f76364b181cb3530cc4e55f70eb5e703c2f35792/gemmi-0.4.9-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,988 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c1/60/bf7c8d55f0e01150736289648b9317afc8aaaaa341d2df736b88250aac1f/gemmi-0.4.9-cp39-cp39-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,988 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fd/bd/bccc8fc52bcb02fed07fc82e1fc76470397705048a3c6464f769d20964d1/gemmi-0.4.9-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,989 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d8/f4/8b77aaff5a83c69d45aa84dbe95df55a1f881b67792c63ada24a1cc3b787/gemmi-0.4.9-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,989 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/82/c8/81912349292efd57f8b418615c5f3d5989939a700fc1824ee0381c55cad7/gemmi-0.4.9-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,990 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5f/09/b14a04e144961d07aa8d7794c2a74ca0a98ec3eef934cf5af385e7ea577f/gemmi-0.4.9-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,990 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/72/78/3d88e30416ea7e5281a388c548786e42cc34d0a3dbc5b6c3ae99c4e9584c/gemmi-0.4.9-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,990 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/54/70/24d2179a9a315ee7697b89434fe4704fa976bc5f8f35bd36ada7d3146554/gemmi-0.4.9-pp36-pypy36_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,991 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6c/57/ae1e113330952b2dd3e16054607347065c39635d5b0eef42f82706c4573e/gemmi-0.4.9-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,992 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c5/e8/5f9736f5c9eb35d4e7e46863ae1178edc03ff57969c4ec2b410442bf588d/gemmi-0.4.9-pp37-pypy37_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,992 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2d/a2/8fa1006b4b71ffb6127c284aa6a3ab434aeee124724333f338d6b8b63019/gemmi-0.4.9-pp37-pypy37_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,993 Found link https://files.pythonhosted.org/packages/a3/07/40e5d0b8eeed379c2f0494b24d5777df3ad1df473e49f694688fe55d606c/gemmi-0.4.9.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.9 2023-09-13T09:49:11,993 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5d/7e/b1b2e2352137c9efb05b74829494b236cba98819d7b1eebecea2712cfa0b/gemmi-0.5.0-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,994 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d7/e9/ec01690a20730dcd1a058fcceede913ceaa418cf54ab33ac6ae581afccb0/gemmi-0.5.0-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,995 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/96/4b/e158002bc02949b84a5db4d34ee590e483ecbdf0933c91d44623fdf2d0bc/gemmi-0.5.0-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,996 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ba/2e/35ee66fe2b29f24d4ade466c65bcc05a329831cf2b2b0835c8e5f605c288/gemmi-0.5.0-cp27-cp27mu-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,996 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b5/b7/df0e4c0f360194eecc6497ccc9efbb77e16e86e30a80f05fb8c826961084/gemmi-0.5.0-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,996 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d3/5f/2a90f7feffa450e0c01107b789df325ad04d6d03e38c0170e4947247eac8/gemmi-0.5.0-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,997 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4b/cb/3095d21f6581cce5238ef7d22a952dd686b5cde4e5f0353b42f7d5722d6b/gemmi-0.5.0-cp310-cp310-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,997 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/62/9a/df01727dabeeec4325edd3c6e300394c351ef632dd924a1e57b95397ac5a/gemmi-0.5.0-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,998 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/17/ad/7711a08353106486f32bae4f04cdd61e9d074cd6f4041529d32ca8733947/gemmi-0.5.0-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,999 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7b/90/839af23d8b9ad3fc3c8082013d31940de27508350b274e405a716cbd6c36/gemmi-0.5.0-cp310-cp310-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:11,999 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/80/0f/6f8136965ed4b67f0b63ae86263f5012e4e5fb98c9d45ae6664c38e5934f/gemmi-0.5.0-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,000 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/89/3c/ff58df8fff8168a9a06e5f6ecd3f85e4047b8b4b1d53ae7f9b1f71d35b85/gemmi-0.5.0-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,000 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b6/1e/f77d398d0badef12f6717696b4781114fc8840413d03f5cd9ee6f867e212/gemmi-0.5.0-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,001 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2a/1e/5519dac06aa9d7c30e6402b54a11621abe66b796f2050c5f26be003cf3a2/gemmi-0.5.0-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,002 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4e/08/902a8302cd99b58450b9e7ab3f72c0f579bb6f142a491d2bb36792868e51/gemmi-0.5.0-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,002 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b8/2d/f75ed6b935336247702844ce20b8c542d5d1f11938f04675c822d536ca54/gemmi-0.5.0-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,003 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/17/a7/92cc0e9a3c0ca7cb74cf4a9842a6ee8e73f889474f759316d15468ad756b/gemmi-0.5.0-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,004 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/be/77/d6b339d7fb4d03b99cb7348548308df8aa2083c036892cf1cd0348adc008/gemmi-0.5.0-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,004 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8e/de/de64b9614bc093414e201e41af48e62491033d02d54ca10518789f01bad9/gemmi-0.5.0-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,005 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a9/ef/a8a518a29b43c417dfe8599b97ff8810a10f2ebb932cbc599d221ea05f34/gemmi-0.5.0-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,005 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/77/47/2c77c4f20424b8033cb19f9149b10f37248f6362bf6b8645470cd912ff9a/gemmi-0.5.0-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,006 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2b/6c/92cdf7e4a6e25d3e38fd9240de050dd0cd824732ae7b110286881767c7a2/gemmi-0.5.0-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,006 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ea/0d/d2fdbd7c6b9b84769358c7e88fe97f3cbde12b3b6f5c177fd36a5cefcea4/gemmi-0.5.0-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,007 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2b/40/ba626feff2b321db0b80b31312142f8dc0da8706ea65eba09eb92c69fb52/gemmi-0.5.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,007 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8e/58/2e3530707625e09caf89244deb9759afc44a775a2fff6ba3a7bef82ea476/gemmi-0.5.0-cp38-cp38-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,008 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8f/3d/2245c341a333ef8fa247e44237665150e6167f8ac2c63dd01f789bd72959/gemmi-0.5.0-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,008 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3a/89/33e00d7d352fad174b8767c4b9e8538fb6f33021689a36ee3928ee9924bd/gemmi-0.5.0-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,009 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/87/d7/7dc338573b4b8181c10df98be95cdbeb0b4e6a93079096623222dd6aa3a8/gemmi-0.5.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,010 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b9/1c/37636503b6acc4df72f7f2b8bb15941a44f129b0190a1f0abcdb561dda1a/gemmi-0.5.0-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,010 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d5/95/61916884f56af3cc500a8029a478e45eb05a716574c71656304bfd3455ee/gemmi-0.5.0-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,011 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a0/64/03d57b7c76535f4d2e79bf36c405ae25619264e9b1d7f673b0d204f13bd3/gemmi-0.5.0-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,011 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/95/04/4e7b48d479213ee6907e50c42b568c789ff991e11a69c628595f24908d91/gemmi-0.5.0-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,012 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d1/45/60bc4f0e73c1ed8c1071ccc74c3ae860b47d457ccdc9f930e0277482e3a6/gemmi-0.5.0-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,013 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/96/3c/66946187b011efb26cf735df9fcd1e6ae5a91cd4ddbe216beefc6be26172/gemmi-0.5.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,013 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c5/a4/44932652e4acd0c04debcdd7115d1c5a087fc8e7477cdbbbf4f1ee771e74/gemmi-0.5.0-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,013 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c0/50/d2bd30b284932128864c0ba34e3a8cf0dc6d1c9b6dd44e081807a30927f3/gemmi-0.5.0-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,014 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a5/be/8da12fbe007e468ef7125affeb15375ea602ab22eed9d5197278356ae884/gemmi-0.5.0-pp37-pypy37_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,014 Found link https://files.pythonhosted.org/packages/76/6f/0f81a068de2ac6f7153b9590888c29247a3ca23d1b3e5f54e9aab3f90eda/gemmi-0.5.0.tar.gz (from 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https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,019 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/c9/6f2873961d70968de2c7454667356545b49729458986e2445babca52b666/gemmi-0.5.1-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,019 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2b/8a/5bee8dd8d5fa98a08788e90bc85f178697095ee874fd519f851371638ee3/gemmi-0.5.1-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,020 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fa/70/de03b41043537110b431c090827318d40e987d2d76d45cc2b26568069a17/gemmi-0.5.1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,021 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/35/f7/16e3e6bf9f587f9f1e628779cb91d64c4fc87b7a1bc39c516ccd12d43bf6/gemmi-0.5.1-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,021 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/40/66/9253c3fc51382c7deb6a6d79789bce72eff84f664d7644c344dc8074a859/gemmi-0.5.1-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,022 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/67/26/f4b4f8ced10fbdc0ac99869c30d02bff92f06008eddb529e34592dec0b9f/gemmi-0.5.1-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,022 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fe/2c/e933240d7b3469de8584df7a2d696ecb32bf632a17fe14f64590c1c0181b/gemmi-0.5.1-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,023 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3f/2a/49fcab403e40d161ef7d5e6b74e1c16d1377e93ff9f05a481ac2d93d5b9b/gemmi-0.5.1-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,023 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/37/6d/3abe1d11e3d5412b83bbe1e6227ed14a4e609a199b14d84c877154004130/gemmi-0.5.1-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,023 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/42/a4/e50ec4ffbbb1e2fd754f9e580b75572a452b6f2ef6b3b6a517c479c43739/gemmi-0.5.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,024 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4c/dc/ba2300387d633bffacac2f6c9c0a68669602a15efe30b6e35dc9599685ea/gemmi-0.5.1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,025 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8b/78/dcabd5c547aa07eb130931089d810c21577ac7627a9b8f9a6cfc0a9db0f1/gemmi-0.5.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,025 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/04/da/6b9be38d955006a6dc09955cea0e6c3561b0dd3cab2d7102d25fb012d62a/gemmi-0.5.1-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,026 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0b/b0/2b9efe6a849f9fe8ee450ba0f85b6298a68696c813dc33fe3a2cdf033aea/gemmi-0.5.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,027 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b4/5a/881dd10dda412b9f8c7610a2f588fb16c9f1ec22d88811f0bfd1a2bab0d5/gemmi-0.5.1-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,027 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/27/be/57ed099c9778f29bdfcb8496cb125d802cd8e1967fcbba3b2e029e06a900/gemmi-0.5.1-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,028 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e4/1a/68c0cf47ccb39d4215b2756a4c547b99bc009233e9def8b911dad19f7523/gemmi-0.5.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,028 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f3/8c/06f5b496a81040137b98886745477b7eee4edf4bd896d4123bb121fc1671/gemmi-0.5.1-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,029 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/50/cb/f2b6eed33269e437d6c1a6bb1398e1738f41b3e0ee4ff403e45d5e9f119a/gemmi-0.5.1-pp38-pypy38_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,030 Found link https://files.pythonhosted.org/packages/57/65/5d3e560231481bf7c79a05d88230177e435eb4d1acdf59ccf42a716a0b02/gemmi-0.5.1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.1 2023-09-13T09:49:12,030 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fd/a9/5f858b6487c4e5ab0622e6fdcdf0538c72bd50f825617150471754585acb/gemmi-0.5.2-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,031 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4b/40/d5af9e230a7ccea751437fc4b85317844e86113514e83b3f7e0393f03b40/gemmi-0.5.2-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,031 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0e/59/c560957e0664136774ffe09cca069b2b0040bd8fa24b9452d9ae1bb98102/gemmi-0.5.2-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,032 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/81/a7/be0bab8a6ffc965c5ffe54fa58185e1292549592cfe2d3b591a96b7259cc/gemmi-0.5.2-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,032 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b3/9d/bc42166366a086933cf70c4225c71ba8c138798a865c95a0ccecbc8c933f/gemmi-0.5.2-cp310-cp310-macosx_11_0_arm64.whl (from 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https://files.pythonhosted.org/packages/d9/47/646295105e51c0022c0dc5adf2b3a6497f73e802bf741cc45b1ca5b45e65/gemmi-0.5.2-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,035 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b0/34/aa506ceccf8aad40def7f7de57e4a17384aff3ae311dca7e89a10ea9a8d1/gemmi-0.5.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,036 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3c/7a/6832c9ec110fa92d49c83b29a20a7c639bd20748a711b6743fa5cfd125dd/gemmi-0.5.2-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,036 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/be/15/dd9a5b7a3e7e98254ce1c991d759777c7e4e2b8b7d277e7ddbb280ed5745/gemmi-0.5.2-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,037 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/12/aa/527a757195dc72187c0ff83bf131dcf0038bf0c2e3a603a38d7fa4215527/gemmi-0.5.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,038 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/00/fa/9f13049567db238c9d54878057964a2bbbe6487eaa44e0dfe43f91499001/gemmi-0.5.2-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,038 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a5/5d/3b545003aa183963308071286e02eabc505dc916d6fd5345a9da1016cb1c/gemmi-0.5.2-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,039 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/68/aa/471b25c35d0766820ad2c2a910929082964d2d5cbc5b2792cffcbf2eb32f/gemmi-0.5.2-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,039 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f1/20/470fdeca31ccfda56451c19ecb2e620c16bc1070b2b9ec7d405f1fb01b27/gemmi-0.5.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,040 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c4/94/672d0881ddddebac8df9a459002b78bd0b7063f7354f05bbb72f86449d7e/gemmi-0.5.2-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,040 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/80/49/accc59e5cc1fe68d24b74fe6e861d050dc84bbda02fe1c1766401179c4b2/gemmi-0.5.2-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,041 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c3/c2/26696dd217cde1c53004d6b43a94c2704c363ae16e390ea6c69bdd2239c0/gemmi-0.5.2-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,041 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fc/c5/6595cd65360e50de9ee0fe440fab1f2d0d00ded089a6fbe651fe6ae86344/gemmi-0.5.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,042 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/44/ee/a6d5ba33d69cc6fdb73effea27ff3e2ea9fd3bbe00e535902c24c098e349/gemmi-0.5.2-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,042 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/77/3e/1bb0e7f54832a84d703740394e4e88ee8a63807930bfe36dcd2e61e18b70/gemmi-0.5.2-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,043 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c5/bf/05d6199ebd6b4a78d89f7ab4679ac525ff245db1310b35fdceeed72268c5/gemmi-0.5.2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,043 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/96/e3/46432303490b40a1db81cecac60777c45469bddf13af36e0364a8b73e98b/gemmi-0.5.2-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,044 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e2/e4/d8552659c51352812ed8eaea7c7036cd1d6816c4129521bba271342dad71/gemmi-0.5.2-pp38-pypy38_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,045 Found link https://files.pythonhosted.org/packages/05/d2/7cbd2c8ed64f30098ca929426c4581947d3a307657ad383897c6d426c352/gemmi-0.5.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.2 2023-09-13T09:49:12,045 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/55/e4/aaf93cf945278e8eafe401c439a3fa0f9872fe1403adb3615cfd98b2eeff/gemmi-0.5.3-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,046 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ac/0b/8e99c7eb4b831b9fa748d4a1c51691017c4c74960c992f45a04093df0314/gemmi-0.5.3-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,047 Skipping link: No binaries permitted for gemmi: 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https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,049 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d5/ec/bb184260b935967bb7e05f02a369ce12bb1c5ceac1376da6b567f17e0d9f/gemmi-0.5.3-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,049 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b3/b3/5c8739dc4b97a085259caa681178227ba459f239653afb39a40b18e3f78d/gemmi-0.5.3-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,050 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b9/6a/15269ce5647809592e78d29ebe0e8cc35e637b57cdd51afd508642292ee1/gemmi-0.5.3-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,050 Skipping link: No binaries permitted for gemmi: 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https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,053 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ef/1d/07b0ff9f29974b8862afda122a573c9cde0d7a076179c8b6eb8e9fbc11fe/gemmi-0.5.3-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,053 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/27/7e/c78766eca9aa7ff1e0cfc5513b60c22d34d7791c215cc6c4cbea70c7a571/gemmi-0.5.3-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,054 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5d/d7/41e2e4f53d2391fd50fe5da1b0bf61cc2411dda9ad0113137753cd5498ee/gemmi-0.5.3-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,054 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,057 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/20/c8/cc9d7cb994b98cd594952fdd297897ded30d9626b7200322cd8bff2f72cd/gemmi-0.5.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,057 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/60/64/9581c9bdf168eb3e20271277d4f03c0f41ad32f9e4a660f5bb3052cb65e7/gemmi-0.5.3-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,058 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/18/e0/752a99fc9677f351e1d491d8e91f5e20ddb4a3a16c584132d14051529149/gemmi-0.5.3-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,058 Skipping link: No binaries permitted for gemmi: 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link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ea/16/9cdb5f325927d94675187cce48d3f9d70a69801a0f0c0b9b9a5812335932/gemmi-0.5.4-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,061 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/34/22/280fbec5a23dbcc5657925137f5dd0568b9d1f13b55c82db21c0689cc528/gemmi-0.5.4-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,062 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d8/d3/65f7ca88c42515502eca86a82322123f83b65fb925b7adcbc8ad4d00acd8/gemmi-0.5.4-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,062 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fc/b6/7f62137922cacb64cb7c3c65a6813183c9dbf18c56743ff04496856c9e59/gemmi-0.5.4-cp310-cp310-macosx_10_9_x86_64.whl (from 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2023-09-13T09:49:12,067 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6e/40/9b2f5eb45200eed97427e0a3355f81e01cdcd020017fef5962e10b37a822/gemmi-0.5.4-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,067 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ba/63/be97c983f4d05eb9834c63bc2af12ff079c91ca9e5704deadf6185470ab4/gemmi-0.5.4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,068 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/dd/a5/9b9833335b38730e20103557d943896c983406df688e48b3b1d5756af918/gemmi-0.5.4-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,068 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,070 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/17/19/9135d06fdc0b4794326c0f020a658b053c9ceec94ecf272233e3de503129/gemmi-0.5.4-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,071 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d1/ff/8b5914f6ab4d7b3545a1099e5fc5f3f793cef92685e759efa487b6c4d068/gemmi-0.5.4-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,071 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/92/a5/88577ee7c9715f2f2f1e3fc81e892bffbb840598699063960957057a7995/gemmi-0.5.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,072 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/75/82/dcef0f4314e04d5f79575def71f8311811f6699e3c36fd79153892515fd8/gemmi-0.5.4-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,073 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f4/ef/9dbe8ef4d72224b1f768f15597bc7d63a92e45bf167e13c8ebf5c759c6e2/gemmi-0.5.4-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,073 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/18/d0/1a6f551b957e99b87b2a69c04142cc12484158ad9e97782f8c7f3cfe6347/gemmi-0.5.4-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,074 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/42/4f/c0814113c10a1bef981ccc9d58e68c21994cc05f9cc524b51c38066fd914/gemmi-0.5.4-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,074 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d7/52/561df927c23e6f12a3315946d41936240b3f1059bdacaf56c738c5c69bb3/gemmi-0.5.4-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,075 Found link https://files.pythonhosted.org/packages/f8/17/fd072a26394bbb01c9562b0090fc9282e5ca208364754b36cf30153b52e9/gemmi-0.5.4.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.4 2023-09-13T09:49:12,075 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ea/33/cf906ce011ccfca79c5704d4cf5691e5c2be9dffa46f159e2f792fd7f056/gemmi-0.5.5-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,076 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d2/9f/8d5439e37ad8337904a303d2d5a02027b1eacc6684449e0a19f9992d90b3/gemmi-0.5.5-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,076 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/77/d2/1531afc7535decb6b7bebbb74524ca3d4c716bb7f3a7570f0acc1a91cc34/gemmi-0.5.5-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,077 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b8/3a/a6ecf3270090f874239f38287a3eda4e7fdb071bb7e24774a23207b76c73/gemmi-0.5.5-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,077 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f8/cf/83ca23cd819854187169b6a474a5c4df6e9334762c9021ec0303f7d51765/gemmi-0.5.5-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,078 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,080 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5c/39/e809c957ba1fe10ff61af42f87b84c00f8cbaaa894db076763c9a1838fcf/gemmi-0.5.5-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,081 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/da/50/24ab02b6a771c88127e7c414e516aa71f76db1f04abd7c9491769c61e0ae/gemmi-0.5.5-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,081 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/48/9e/383f0ff461bfc73d4a00604d2a64c69443ce5e108f54eead7502d5935709/gemmi-0.5.5-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,082 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,084 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f1/64/715370a8abc99de51024107b1ea899d7cd15e0721331e61b61d950771767/gemmi-0.5.5-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,085 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/70/7e/000c77c1494a3b7b2b301b9234da30fec8ea78b5392617804cf3c4c1138b/gemmi-0.5.5-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,085 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8e/64/5955e1602cc634e8e125f41a726a029bb75a7f4164783c79a4f174e52064/gemmi-0.5.5-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,086 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,088 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7b/64/5e4a17a96753ac6b446b2d845b5347402d3752a4a2c6a6911d48f2ee7341/gemmi-0.5.5-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,089 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d5/07/b239263539dc2aa2f7dd30755bf4cad735861a81d31fc62a08bf8b4405c7/gemmi-0.5.5-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,089 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/48/90/3c7646c751dc39b2a0d44a4800fd61cbdae17d0207b5edbbf2c91778f5e5/gemmi-0.5.5-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,090 Found link https://files.pythonhosted.org/packages/61/fd/6d97b18fb1875f92195eb0177d824a5778310a137fd39fa9c943ed8e5edf/gemmi-0.5.5.tar.gz (from 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2023-09-13T09:49:12,094 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/19/a0/4cd0c72f67d1a44b5b6466a8abdcf2ee84d75d81a9e4b8c240c7c24b15e5/gemmi-0.5.6-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,095 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d2/63/ca5211bfb39c1934ed40b723be97dd7efed2e50a3f56b667720e306625f2/gemmi-0.5.6-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,096 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a3/99/c454fb9a6657d21f4de67c15bb48a5158bb28b707c1bd0c402fc25695718/gemmi-0.5.6-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,096 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,099 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4e/ef/f64bc4e49cb6ee6937aa3b0227465519eda3c256fa0534f427793fdfaddc/gemmi-0.5.6-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,099 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e8/6e/8c79ba89f1f40510864f001434183bbe249842254a774c2f44a4d39f624e/gemmi-0.5.6-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,100 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0b/27/7dc4a6f04a5c9ec681c000f2c5b21b63721585902e8bbacb4c1466d8e669/gemmi-0.5.6-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,100 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,102 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a0/74/ab723bc4e967a1bc60bf3a246ce1069c6215e5e6f20c45ea111bc2ea11e2/gemmi-0.5.6-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,103 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/18/e2/037d85e2bc942e71df33b36e5551271853fdc5fe727fcc70e02405470b22/gemmi-0.5.6-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,103 Found link https://files.pythonhosted.org/packages/d8/b9/f34297a0a44be48553a7fee2c2cb3cdae9ba629b91755becd130fcd1a4d7/gemmi-0.5.6.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.6 2023-09-13T09:49:12,104 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/07/4d/15b3312e17b104ef2de349d509543a43a4f02f9f9fa24764651f3e715083/gemmi-0.5.7-cp310-cp310-macosx_10_9_x86_64.whl (from 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2023-09-13T09:49:12,109 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e7/f7/699371413dde01c3775ddb9a9606c64d22e202f707a158b8b7999a5c36e9/gemmi-0.5.7-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,109 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a4/6b/b6aa72bd150c22cd5ed36c952f589bd6e135addc1a53908976fb2e27e961/gemmi-0.5.7-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,110 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c7/3e/6b22d8ba1ab0c423d5086dce986c31e54894890148bafac9cd6502928871/gemmi-0.5.7-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,110 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,113 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0e/4b/ec697a9dc25567987c188f007403de25cbcd7bebdf01d5d76f889101168d/gemmi-0.5.7-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,114 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d2/3e/d4a38d1df34cd653ebc3f969a87e83096c1cadee26b67aebb62efb197fa2/gemmi-0.5.7-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,114 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1b/fd/7a55214ae1697d99e1477d5ca3cf1193ee12ce43474dbf92314d5a0fe8ec/gemmi-0.5.7-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,115 Skipping link: No binaries permitted for gemmi: 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(from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,122 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e8/5d/6ef13a910a48b552ef3e84231071b9cfae5ca51944139104550ba28a2da2/gemmi-0.5.8-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,122 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/01/37/5bcae9ec39b50be8e7c297693449bceb55c8037c5d3011966b7ded490f2a/gemmi-0.5.8-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,123 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9e/74/5211db7e95dc56aeb0611722b138de707800fafbc05a10a0f0e7d55e4202/gemmi-0.5.8-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,124 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,130 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cf/aa/0c3d6233091464d8cf46d45aaf12b5cd1479abe458f0947caaeb91b69fc9/gemmi-0.5.8-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,131 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/29/62/c65abc1ce7d8e38d84ff591b07a4e18b19910ed835375100bd375b099ba4/gemmi-0.5.8-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,131 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/20/29/22d9fe974ff14d61c69da5944f55161b2387c4f74a16d615a6d67a58c737/gemmi-0.5.8-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,132 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,135 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1f/85/b213cacd5e71ab28ae1229899773786f9e062fe2c0f563a794b3e69b28b0/gemmi-0.5.8-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,135 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/06/64/52befb7f6fdb71090c1e892bf779c6e082f8780bb4fef1b80da6a428b1c8/gemmi-0.5.8-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,136 Found link https://files.pythonhosted.org/packages/31/c8/f3eaa51dffd731487601d5c23dc4673efe1be59e5dbe3addb2044d1838ea/gemmi-0.5.8.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.8 2023-09-13T09:49:12,137 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fb/9f/a9240e99a072f57a9d8acb47e1fc4470ea21837e16005d464ea2acba464c/gemmi-0.6.0-cp310-cp310-macosx_10_9_x86_64.whl (from 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https://files.pythonhosted.org/packages/74/8b/4429c13255f48b35248bdd40bd6b47574fb55a46608228baf08d2a33fb4d/gemmi-0.6.0-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,139 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4a/8b/f3147c9d9ce91479f0b88ba9b82dbdfd93d5c17bfe62ae4856e2ef205df4/gemmi-0.6.0-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,140 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b6/ba/96f4248f0b4d10d08b27505ca0eecdd651c188bac88e0a801942dc2726ee/gemmi-0.6.0-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,140 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0f/1e/024dbf4200bcf40f6e451c9693bc63b011d1cc61b7398085d2d8031b31d1/gemmi-0.6.0-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,141 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a4/f5/6a1336ab3ba569643cd1a539e1fde833309c733e3d187fbba3fa4a513083/gemmi-0.6.0-cp311-cp311-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,142 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b7/43/982038c5665d615ee5d7b626c6e74b014852b51e9a79e210e06f85f03d4b/gemmi-0.6.0-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,142 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/36/e6/dd2e056f2cc07d68472ac9a167a2e492961da1daae6c9db8d3e3755b4b6f/gemmi-0.6.0-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,143 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,149 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/df/6d/ed3bce7eeb73d9076ff4fb3795936dc8710e27abc4965e2709c1cdac3a48/gemmi-0.6.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,150 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3c/a9/afeccb27445f1b37dacacd43cdce2b4c41faed56d233c823d1278add7968/gemmi-0.6.0-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,150 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/82/60/2101d761c3a95e1addaebbc09fbd2051c190c70b9a1ce8550ee855719826/gemmi-0.6.0-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,151 Skipping link: No binaries permitted for gemmi: 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https://files.pythonhosted.org/packages/23/76/8509a4cfa43b368f04086306dc3f6f6e315d1de40651f739eaba246e6d71/gemmi-0.6.1-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,156 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a2/cc/0b216f58a5658460ece7a7ada914db79389f7935577341cfc4c18a597040/gemmi-0.6.1-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,156 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6d/56/673e6948e171b2f09b143f066090365c423c09f74502b16938994b3ad768/gemmi-0.6.1-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,157 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b0/5b/0fc5e9ce1c3f57496f9eeb9547adcc7e1f209321272f8391b3a9425f9cf9/gemmi-0.6.1-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,157 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cd/f5/ae84e87683311fa9b2cb3ccb196588defc9bbe08c57d7fd9e0c1b97875f0/gemmi-0.6.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,158 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/02/f8/658246af5745117893f852df44aae07c7caf61502c7fc5a6711e1eb60618/gemmi-0.6.1-cp311-cp311-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,158 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/22/2a/a788ecd66793bfb22731a2e668cb05158cd96ecd8001c5036c14834c3f9e/gemmi-0.6.1-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,159 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,161 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/da/c8/722a5e08eee5b316a582fc251eb08f4fc99b1d634f2332e68eae26ba8d7f/gemmi-0.6.1-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,162 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5c/7d/756544719175bf44a52bd632c2c76746ed017c4c9f18cc552da4655c6c11/gemmi-0.6.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,163 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a0/bf/267a4613fe7e80e11ec31a74eff645ff486198fe52c7050dc82f22cbe0ca/gemmi-0.6.1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,164 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/70/82/c64da046f04966f1df9e20b3174f88b53b5dc33cd4a75c2d7ea703719e78/gemmi-0.6.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,164 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/14/20/7260a535a21cd073f8237fcff65026ee800368b05f0db9f21b028d95b21a/gemmi-0.6.1-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,165 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/13/b2/fecb0748b5fb04ab9c9313db0908f460da21112eea85526a78413aad7ff0/gemmi-0.6.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,165 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/92/10/4b29adb9d05e2caca176238d598ba624cf36ea06f130a6e78cfbed012a5a/gemmi-0.6.1-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,165 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c9/8a/1a374d9147c4f065d1d86541871a1ddc1e19b82c0d29559c4bc12ca7e7f6/gemmi-0.6.1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,166 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b6/8f/4b0b65112ac367bc97fdfaecaf66ee317f38b5a49a70ab504e290f4c5035/gemmi-0.6.1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,166 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/43/d6/45cf93e379bd915e52ea55888cbe6c8707d86e5329369830d3c061850a91/gemmi-0.6.1-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,167 Found link https://files.pythonhosted.org/packages/42/0f/9aa86fa4b44d9cceb6e0e3240c8869d3fca1d36a35ed9ed6672d02e10780/gemmi-0.6.1.tar.gz (from 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Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/90/a4/8b0cec8f838905805d538aa853dd63b77ee5ac6253c65c834e1ffa9b62c8/gemmi-0.6.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,173 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/21/64/4d397f8c505ae2feb393d1c1750952388048eb9ccc79180a9d5e5f946018/gemmi-0.6.2-cp311-cp311-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,174 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e2/1c/bd23a0e4c87d6b1337ca22183cf62b1305c345fe337f9b783592baabddf8/gemmi-0.6.2-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,174 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,176 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/39/63/c9b43ec4e6e1534b8201613eac97441d834774c6fc75b54ea48b2fc3672c/gemmi-0.6.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,177 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f0/e0/a31f0c4ee2b0c66a1620ec593416e9c5360568958805604fa09b0bb5c808/gemmi-0.6.2-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,177 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0e/f9/194a7531f16bf41cc697134a3805d7fefa0a5dfd65d6f9057cafd9f24da3/gemmi-0.6.2-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,178 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,180 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1d/f0/20a8c1b4c118f8a9e707071390d9406e57897001fd31200620c16302ed5c/gemmi-0.6.2-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,181 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5a/e0/aae8f16843080d2bd0ad890f0962d60a240aee8095f05a2971fb1c5d023e/gemmi-0.6.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,182 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/46/a7/2bc3cd1912ffd7d06e52f81a5722cf0eaa297635a8ad3daf83cd701df7d6/gemmi-0.6.2-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,182 Skipping link: No binaries permitted for gemmi: 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link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/1d/80e2b1486f0ca62fa0a941ab1bc519b65b9a2d67e9aeacca938abedd1ae2/gemmi-0.6.3-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,185 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5d/f7/450ec32fd7bb8567db2a67bcfac3fb1513b7f8c1083da00a163be71ad2fb/gemmi-0.6.3-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,186 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b6/50/42ce57c58aa0e9679690f044dbaec35160d42c5581588eab6601189e4513/gemmi-0.6.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,186 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d2/20/b7e980dd668de2fffbb16fbeb1553b4f410f02507ec1a334976854cb7181/gemmi-0.6.3-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,187 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/63/86/eef29582562dcb5939471bcf5bff800f8b1f074fe9f50a332ba7bc4759e5/gemmi-0.6.3-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,187 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e3/07/2859d0b61e6a8c6da0284bd21e3dc25b0a3f57a715931f663e90dc6f700c/gemmi-0.6.3-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,188 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/27/50/7b8db040b17e71dc3dab6eb5f9f06d9906c5176182fae8cf17cbf7e914f7/gemmi-0.6.3-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,188 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f1/cc/699e051a8a6210709ce253b077ceb260241f5dddcc1e98be0d99a0c1a97c/gemmi-0.6.3-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,189 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/f7/ce33f64f767e618b8194a4ad7c6799bb0de5bd303e28ae975484ba2371cd/gemmi-0.6.3-cp311-cp311-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,190 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/49/d3/98b5a45f6ec9e7a310fca04b2d146b6bb08405707e5580bb4981d7f3ef93/gemmi-0.6.3-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,191 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cb/41/7d3b982b3fc9895b8b53b772ef169feaa2eac45d4feacbb99a46533c3a96/gemmi-0.6.3-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,191 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0f/54/782c77c72f169030c51dc09d71f5caa5ad458d75d313565f0b74732c3750/gemmi-0.6.3-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,192 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5e/40/dd225bac00e702847dc90d6f6ac29af65e9964c6607d63b5d83f8fecbefc/gemmi-0.6.3-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,192 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c3/61/32901b67f656efb85f036d75c247499258df0bb913708a45d165d307f9a5/gemmi-0.6.3-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,192 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fb/f3/958eea26aac8e0d75fe53f2bda99e845af102704a67d842b57a99552cbc0/gemmi-0.6.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,193 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/84/5c/8921c5f4ac754742d68ddbde778141925bd5a4f2477ced4920518b2facbc/gemmi-0.6.3-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,193 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/18/69/19929a2fc1c0ef11721efc7fa9fd80c47556ed80e28ff4147135ddf02056/gemmi-0.6.3-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,194 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/08/ea/f7b0594184ab627e5b7bc8dd89a7c22e337965b474013724772bae475924/gemmi-0.6.3-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,195 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b4/c1/92853463305098ebad409266e674086760ab1cb2c76d993a3fe93ed8051b/gemmi-0.6.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,195 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a3/54/cbb0cfb03a52649e47c4a184f81c60a003e1d79ec84a65f47f0634d51dfa/gemmi-0.6.3-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,196 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9c/ca/3eba7e46d7bea0261a2f518396321a5873271193085613e1c024edfec3ad/gemmi-0.6.3-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,197 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b2/34/111177b73dcc8adc05c3447711c127beacb9811c922883afd82eb3fcb5d0/gemmi-0.6.3-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,197 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/17/98/a7de036d0ce4096d60d826999e40268f3237d5c1949bac8a424b448d51fb/gemmi-0.6.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,198 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/26/f2/fde6630eff028a5e859d607e9c484525b967dba792a64fec2d37d2075e9c/gemmi-0.6.3-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,198 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fb/0c/497caef7e24bdababacd7e0eb81678b215dba7b263f31b6003e54db8c53c/gemmi-0.6.3-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,199 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ce/c3/181c59a7a81bd5cc4362f923c1ba42424b0bff24ee8f4fa46da1db5778bb/gemmi-0.6.3-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,200 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/20/ed/30eedc8aa3f2c858d357c9b8dbc234560f20aac2f4b849aee3105d94377b/gemmi-0.6.3-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-13T09:49:12,200 Found link https://files.pythonhosted.org/packages/e9/f3/8b3a4c1adf145507ed19cf58788f9a0535b78c2bee58eadae26ebf4b7e18/gemmi-0.6.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.6.3 2023-09-13T09:49:12,201 Fetching project page and analyzing links: https://www.piwheels.org/simple/gemmi/ 2023-09-13T09:49:12,202 Getting page https://www.piwheels.org/simple/gemmi/ 2023-09-13T09:49:12,203 Found index url https://www.piwheels.org/simple/ 2023-09-13T09:49:12,460 Fetched page https://www.piwheels.org/simple/gemmi/ as text/html 2023-09-13T09:49:12,491 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.6.3-cp39-cp39-linux_armv7l.whl#sha256=c7377c9e47775fb567659878aa2eb4c68b16c36a8fac32cccd8ebc69e183ae11 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,491 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.6.3-cp39-cp39-linux_armv6l.whl#sha256=c7377c9e47775fb567659878aa2eb4c68b16c36a8fac32cccd8ebc69e183ae11 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,492 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,495 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.6.2-cp37-cp37m-linux_armv7l.whl#sha256=5faf4e74a61e45bc998b0cacb48d89d5f2e3170a70327be22b562097086b5fe4 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,495 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.6.2-cp37-cp37m-linux_armv6l.whl#sha256=5faf4e74a61e45bc998b0cacb48d89d5f2e3170a70327be22b562097086b5fe4 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,496 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.6.1-cp39-cp39-linux_armv7l.whl#sha256=9cdf2df4d98fc1b1871947004c4a11cdbeea0f8e91792b34a470d3070df61251 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,497 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,499 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.8-cp37-cp37m-linux_armv6l.whl#sha256=cb1712edce1e77e72d89f944731f8921a14bcacd4beca9ea2cad730f395b64ed (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,500 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.7-cp39-cp39-linux_armv7l.whl#sha256=217829361aa2e8d0bbf811ca3783233775b4d906e85ef7d483a15fabc73919ee (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,500 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.7-cp39-cp39-linux_armv6l.whl#sha256=217829361aa2e8d0bbf811ca3783233775b4d906e85ef7d483a15fabc73919ee (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,501 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,503 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.6-cp37-cp37m-linux_armv7l.whl#sha256=ebf3d9e652706444fc456143c2ad74f470a8ac3d1548b471f071a83e8d14813c (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,504 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.6-cp37-cp37m-linux_armv6l.whl#sha256=ebf3d9e652706444fc456143c2ad74f470a8ac3d1548b471f071a83e8d14813c (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,504 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.5-cp39-cp39-linux_armv7l.whl#sha256=8009bd6c9ff05ba855d46259b0947b0f0b036af556d8f91f974c1a5a3c511f27 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,505 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,508 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.5-cp35-cp35m-linux_armv6l.whl#sha256=9467b11948268fd9f578d982bba4cfa8cd2ba910997da7191fa7babbfe48775f (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,508 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.4-cp39-cp39-linux_armv7l.whl#sha256=8ab06aa6ca1fb18e3b1725004277581551891aa0ceb007c9242dbdc61e331efc (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,509 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.4-cp39-cp39-linux_armv6l.whl#sha256=8ab06aa6ca1fb18e3b1725004277581551891aa0ceb007c9242dbdc61e331efc (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,509 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,519 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.1-cp37-cp37m-linux_armv7l.whl#sha256=b1ca40b2288b65a09170f6292ab50465a750d540905601aede8ebe627161b37d (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,520 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.1-cp37-cp37m-linux_armv6l.whl#sha256=b1ca40b2288b65a09170f6292ab50465a750d540905601aede8ebe627161b37d (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,521 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.1-cp35-cp35m-linux_armv7l.whl#sha256=b3c34bc9a9dd3f01dadf85b11a711c6f605d3cc9dbe55f93d07513a9a4200cb3 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,521 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,544 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp37-cp37m-linux_armv7l.whl#sha256=f902d886318bef1f63084c8abf048708dcfc1bdf639d67c16f070410c29e12db (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,545 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp37-cp37m-linux_armv6l.whl#sha256=f902d886318bef1f63084c8abf048708dcfc1bdf639d67c16f070410c29e12db (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,545 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp35-cp35m-linux_armv7l.whl#sha256=d74009113ee2e6167359cfc898acf95ba4a712e96633181a090ff7c93925f5ce (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,545 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp35-cp35m-linux_armv6l.whl#sha256=d74009113ee2e6167359cfc898acf95ba4a712e96633181a090ff7c93925f5ce (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,546 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp311-cp311-linux_armv7l.whl#sha256=11d377c920d577461a07eccaf78ff9f4062d4a8838180369067df65070587cdb (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,546 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp311-cp311-linux_armv6l.whl#sha256=11d377c920d577461a07eccaf78ff9f4062d4a8838180369067df65070587cdb (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,547 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp39-cp39-linux_armv7l.whl#sha256=6d883f4bfcb7f363631a83f8067c8e0bd98d076ff2b69b0cb1792f543139c256 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,548 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp39-cp39-linux_armv6l.whl#sha256=6d883f4bfcb7f363631a83f8067c8e0bd98d076ff2b69b0cb1792f543139c256 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,548 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp37-cp37m-linux_armv7l.whl#sha256=7f334e1ca8c5bca7889987ae1c54c4cfaf43efeb04c4283e5b7344efe680c5e0 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,549 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp37-cp37m-linux_armv6l.whl#sha256=7f334e1ca8c5bca7889987ae1c54c4cfaf43efeb04c4283e5b7344efe680c5e0 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,550 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,552 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.4-cp39-cp39-linux_armv7l.whl#sha256=46bbb0f09c704cd8ab8011fad111e08a607fd5f064fa0041f56ec1c62b8e74c6 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,553 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.4-cp39-cp39-linux_armv6l.whl#sha256=46bbb0f09c704cd8ab8011fad111e08a607fd5f064fa0041f56ec1c62b8e74c6 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,553 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.2-cp39-cp39-linux_armv7l.whl#sha256=39a8c7fb3ec3f9763f6805693416f2c075f33692d8523980a858d067fe9c69e9 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,554 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,556 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.0-cp39-cp39-linux_armv6l.whl#sha256=0fa0e00dda8349e934da9b378af10d708d0f1474244d39b834fb6b5424ce357f (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,556 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.6-cp39-cp39-linux_armv7l.whl#sha256=23b75d17c30e0c453b94a79caab48a631c94404b92d2416a8acdf91ecb68c329 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,557 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.6-cp39-cp39-linux_armv6l.whl#sha256=23b75d17c30e0c453b94a79caab48a631c94404b92d2416a8acdf91ecb68c329 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,558 Skipping link: No binaries permitted for gemmi: 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2023-09-13T09:49:12,560 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.5-cp35-cp35m-linux_armv7l.whl#sha256=22b6cb0c5699f26be92623b5d8bd5e48c4252e647379c9259837689a13f069b8 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,561 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.5-cp35-cp35m-linux_armv6l.whl#sha256=22b6cb0c5699f26be92623b5d8bd5e48c4252e647379c9259837689a13f069b8 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,561 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.4-cp39-cp39-linux_armv7l.whl#sha256=f7084d7d7c2387e74a7745b09eb5311a55cd2d8effa42e3234b63173cac6ed4d (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,562 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.4-cp39-cp39-linux_armv6l.whl#sha256=f7084d7d7c2387e74a7745b09eb5311a55cd2d8effa42e3234b63173cac6ed4d (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,562 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.3-cp35-cp35m-linux_armv6l.whl#sha256=43cdde23b2327d4232b8dc272394d07e1ef9244fa065cd3a5098a832b7de5ec6 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,563 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.3-cp35-cp35m-linux_armv7l.whl#sha256=43cdde23b2327d4232b8dc272394d07e1ef9244fa065cd3a5098a832b7de5ec6 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,563 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.2-cp35-cp35m-linux_armv7l.whl#sha256=a6d8bd66cc25d6b9604268b1b1602fd3e3128f5bd756f797d117b79de41bbaa3 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,564 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.2-cp35-cp35m-linux_armv6l.whl#sha256=a6d8bd66cc25d6b9604268b1b1602fd3e3128f5bd756f797d117b79de41bbaa3 (from https://www.piwheels.org/simple/gemmi/) 2023-09-13T09:49:12,564 Skipping link: not a file: https://www.piwheels.org/simple/gemmi/ 2023-09-13T09:49:12,565 Skipping link: not a file: https://pypi.org/simple/gemmi/ 2023-09-13T09:49:12,590 Given no hashes to check 1 links for project 'gemmi': discarding no candidates 2023-09-13T09:49:12,610 Collecting gemmi==0.4.4 2023-09-13T09:49:12,612 Created temporary directory: /tmp/pip-unpack-u54ah49x 2023-09-13T09:49:13,507 Downloading gemmi-0.4.4.tar.gz (588 kB) 2023-09-13T09:49:14,426 Added gemmi==0.4.4 from https://files.pythonhosted.org/packages/50/93/11e3197ee0d201256c63faca3023f68eb50823f4f0d3dd15c537fce89cc9/gemmi-0.4.4.tar.gz to build tracker '/tmp/pip-build-tracker-fef0l594' 2023-09-13T09:49:14,429 Running setup.py (path:/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/setup.py) egg_info for package gemmi 2023-09-13T09:49:14,430 Created temporary directory: /tmp/pip-pip-egg-info-8z6dd9fp 2023-09-13T09:49:14,431 Preparing metadata (setup.py): started 2023-09-13T09:49:14,433 Running command python setup.py egg_info 2023-09-13T09:49:15,314 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2023-09-13T09:49:15,315 !! 2023-09-13T09:49:15,316 ******************************************************************************** 2023-09-13T09:49:15,316 Requirements should be satisfied by a PEP 517 installer. 2023-09-13T09:49:15,317 If you are using pip, you can try `pip install --use-pep517`. 2023-09-13T09:49:15,318 ******************************************************************************** 2023-09-13T09:49:15,319 !! 2023-09-13T09:49:15,319 dist.fetch_build_eggs(dist.setup_requires) 2023-09-13T09:49:18,099 running egg_info 2023-09-13T09:49:18,101 creating /tmp/pip-pip-egg-info-8z6dd9fp/gemmi.egg-info 2023-09-13T09:49:18,126 writing /tmp/pip-pip-egg-info-8z6dd9fp/gemmi.egg-info/PKG-INFO 2023-09-13T09:49:18,130 writing dependency_links to /tmp/pip-pip-egg-info-8z6dd9fp/gemmi.egg-info/dependency_links.txt 2023-09-13T09:49:18,132 writing top-level names to /tmp/pip-pip-egg-info-8z6dd9fp/gemmi.egg-info/top_level.txt 2023-09-13T09:49:18,134 writing manifest file '/tmp/pip-pip-egg-info-8z6dd9fp/gemmi.egg-info/SOURCES.txt' 2023-09-13T09:49:18,252 reading manifest file '/tmp/pip-pip-egg-info-8z6dd9fp/gemmi.egg-info/SOURCES.txt' 2023-09-13T09:49:18,254 reading manifest template 'MANIFEST.in' 2023-09-13T09:49:18,353 adding license file 'LICENSE.txt' 2023-09-13T09:49:18,366 writing manifest file '/tmp/pip-pip-egg-info-8z6dd9fp/gemmi.egg-info/SOURCES.txt' 2023-09-13T09:49:18,478 Preparing metadata (setup.py): finished with status 'done' 2023-09-13T09:49:18,481 Source in /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3 has version 0.4.4, which satisfies requirement gemmi==0.4.4 from https://files.pythonhosted.org/packages/50/93/11e3197ee0d201256c63faca3023f68eb50823f4f0d3dd15c537fce89cc9/gemmi-0.4.4.tar.gz 2023-09-13T09:49:18,482 Removed gemmi==0.4.4 from https://files.pythonhosted.org/packages/50/93/11e3197ee0d201256c63faca3023f68eb50823f4f0d3dd15c537fce89cc9/gemmi-0.4.4.tar.gz from build tracker '/tmp/pip-build-tracker-fef0l594' 2023-09-13T09:49:18,487 Created temporary directory: /tmp/pip-unpack-8glmq0dh 2023-09-13T09:49:18,488 Created temporary directory: /tmp/pip-unpack-twu66tbq 2023-09-13T09:49:18,490 Building wheels for collected packages: gemmi 2023-09-13T09:49:18,495 Created temporary directory: /tmp/pip-wheel-f04i3198 2023-09-13T09:49:18,496 Building wheel for gemmi (setup.py): started 2023-09-13T09:49:18,497 Destination directory: /tmp/pip-wheel-f04i3198 2023-09-13T09:49:18,498 Running command python setup.py bdist_wheel 2023-09-13T09:49:19,378 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2023-09-13T09:49:19,379 !! 2023-09-13T09:49:19,380 ******************************************************************************** 2023-09-13T09:49:19,381 Requirements should be satisfied by a PEP 517 installer. 2023-09-13T09:49:19,381 If you are using pip, you can try `pip install --use-pep517`. 2023-09-13T09:49:19,382 ******************************************************************************** 2023-09-13T09:49:19,383 !! 2023-09-13T09:49:19,384 dist.fetch_build_eggs(dist.setup_requires) 2023-09-13T09:49:19,733 running bdist_wheel 2023-09-13T09:49:19,813 running build 2023-09-13T09:49:19,813 running build_py 2023-09-13T09:49:19,843 creating build 2023-09-13T09:49:19,844 creating build/lib.linux-armv7l-cpython-311 2023-09-13T09:49:19,845 creating build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,846 copying examples/ccd_subgraph.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,848 copying examples/col_order.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,850 copying examples/merge_mtz_mmcif.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,851 copying examples/__main__.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,853 copying examples/from_json.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,855 copying examples/long_geom.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,857 copying examples/hello.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,859 copying examples/simple_search.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,861 copying examples/rama_plot.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,863 copying examples/rama_gather.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,864 copying examples/__init__.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,866 copying examples/mtz_i_sigi.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,867 copying examples/aafreq.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,869 copying examples/matthews.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,871 copying examples/ccd_gi.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,873 copying examples/maskdiff.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,875 copying examples/mtrix_iso.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,876 copying examples/monomers.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,878 copying examples/sub_ccd.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,880 copying examples/weight.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,882 copying examples/map2mtz.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,884 copying examples/patterson_slice.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,885 copying examples/cif_i_sigi.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-13T09:49:19,888 running build_clib 2023-09-13T09:49:19,922 building 'gemmi_zlib' library 2023-09-13T09:49:19,923 creating build/temp.linux-armv7l-cpython-311 2023-09-13T09:49:19,923 creating build/temp.linux-armv7l-cpython-311/third_party 2023-09-13T09:49:19,924 creating build/temp.linux-armv7l-cpython-311/third_party/zlib 2023-09-13T09:49:19,925 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/adler32.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/adler32.o 2023-09-13T09:49:20,272 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/crc32.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/crc32.o 2023-09-13T09:49:20,736 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/gzlib.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/gzlib.o 2023-09-13T09:49:21,273 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/gzread.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/gzread.o 2023-09-13T09:49:21,972 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/inffast.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/inffast.o 2023-09-13T09:49:22,442 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/inflate.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/inflate.o 2023-09-13T09:49:24,534 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/inftrees.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/inftrees.o 2023-09-13T09:49:24,893 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/zutil.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/zutil.o 2023-09-13T09:49:25,061 arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-311/libgemmi_zlib.a build/temp.linux-armv7l-cpython-311/third_party/zlib/adler32.o build/temp.linux-armv7l-cpython-311/third_party/zlib/crc32.o build/temp.linux-armv7l-cpython-311/third_party/zlib/gzlib.o build/temp.linux-armv7l-cpython-311/third_party/zlib/gzread.o build/temp.linux-armv7l-cpython-311/third_party/zlib/inffast.o build/temp.linux-armv7l-cpython-311/third_party/zlib/inflate.o build/temp.linux-armv7l-cpython-311/third_party/zlib/inftrees.o build/temp.linux-armv7l-cpython-311/third_party/zlib/zutil.o 2023-09-13T09:49:25,090 running build_ext 2023-09-13T09:49:25,093 creating tmp 2023-09-13T09:49:25,094 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c /tmp/tmpp85ucw0q.cpp -o tmp/tmpp85ucw0q.o -std=c++14 2023-09-13T09:49:25,158 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c /tmp/tmp53__i8n0.cpp -o tmp/tmp53__i8n0.o -fvisibility=hidden 2023-09-13T09:49:25,222 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c /tmp/tmphdpjqyxp.cpp -o tmp/tmphdpjqyxp.o -g0 2023-09-13T09:49:25,284 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c /tmp/tmp8l2c85t3.cpp -o tmp/tmp8l2c85t3.o -Wl,-s 2023-09-13T09:49:25,887 building 'gemmi' extension 2023-09-13T09:49:25,897 creating build/temp.linux-armv7l-cpython-311/python 2023-09-13T09:49:25,898 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/align.cpp -o build/temp.linux-armv7l-cpython-311/python/align.o -DVERSION_INFO=\"0.4.4\" -std=c++14 -fvisibility=hidden -g0 2023-09-13T09:49:58,472 In file included from /usr/include/c++/12/vector:70, 2023-09-13T09:49:58,473 from include/gemmi/model.hpp:15, 2023-09-13T09:49:58,473 from include/gemmi/align.hpp:8, 2023-09-13T09:49:58,474 from python/align.cpp:3: 2023-09-13T09:49:58,474 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Position&}; _Tp = gemmi::Position; _Alloc = std::allocator]’: 2023-09-13T09:49:58,475 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:49:58,476 439 | vector<_Tp, _Alloc>:: 2023-09-13T09:49:58,476 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:01,425 In file included from /usr/include/c++/12/vector:64: 2023-09-13T09:50:01,425 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Position; _Alloc = std::allocator]’, 2023-09-13T09:50:01,426 inlined from ‘gemmi::SupResult gemmi::calculate_superposition(ConstResidueSpan, ConstResidueSpan, PolymerType, SupSelect, char, bool)’ at include/gemmi/align.hpp:179:27: 2023-09-13T09:50:01,427 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:01,427 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:50:01,428 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:50:01,428 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Position; _Alloc = std::allocator]’, 2023-09-13T09:50:01,429 inlined from ‘gemmi::SupResult gemmi::calculate_superposition(ConstResidueSpan, ConstResidueSpan, PolymerType, SupSelect, char, bool)’ at include/gemmi/align.hpp:180:27: 2023-09-13T09:50:01,429 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:01,430 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:50:01,430 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:50:01,431 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Position; _Alloc = std::allocator]’, 2023-09-13T09:50:01,431 inlined from ‘gemmi::SupResult gemmi::calculate_superposition(ConstResidueSpan, ConstResidueSpan, PolymerType, SupSelect, char, bool)’ at include/gemmi/align.hpp:185:29: 2023-09-13T09:50:01,432 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:01,432 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:50:01,433 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:50:01,434 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Position; _Alloc = std::allocator]’, 2023-09-13T09:50:01,434 inlined from ‘gemmi::SupResult gemmi::calculate_superposition(ConstResidueSpan, ConstResidueSpan, PolymerType, SupSelect, char, bool)’ at include/gemmi/align.hpp:186:29: 2023-09-13T09:50:01,435 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:01,435 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:50:01,436 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:50:13,106 In file included from python/common.h:3, 2023-09-13T09:50:13,107 from python/align.cpp:7: 2023-09-13T09:50:13,107 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access, gemmi::Atom> >, gemmi::Atom&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = gemmi::BidirIterator, gemmi::Atom> >; Sentinel = gemmi::BidirIterator, gemmi::Atom> >; ValueType = gemmi::Atom&; Extra = {}]’: 2023-09-13T09:50:13,108 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-13T09:50:13,108 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-13T09:50:13,109 | ^~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:13,110 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-13T09:50:13,184 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = gemmi::BidirIterator, gemmi::Atom> >; Sentinel = gemmi::BidirIterator, gemmi::Atom> >; ValueType = gemmi::Atom&; Extra = {}]’, 2023-09-13T09:50:13,184 inlined from ‘pybind11::iterator pybind11::make_iterator(Type&, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Type = gemmi::FilterProxy; Extra = {}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2457:74: 2023-09-13T09:50:13,185 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-13T09:50:13,185 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-13T09:50:13,186 | ^ 2023-09-13T09:50:13,187 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-13T09:50:15,594 In file included from /usr/include/c++/12/vector:63: 2023-09-13T09:50:15,595 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*]’: 2023-09-13T09:50:15,595 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:15,596 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-13T09:50:15,597 | ^~~~~~~~~~~~~~~~ 2023-09-13T09:50:15,597 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:15,705 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*]’: 2023-09-13T09:50:15,705 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:15,706 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:20,415 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’: 2023-09-13T09:50:20,416 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:20,417 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:20,578 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:20,579 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:20,579 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; _Tp = gemmi::ExperimentInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:20,580 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-13T09:50:20,580 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-13T09:50:20,581 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:20,582 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:20,582 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:20,755 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Atom}; _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-13T09:50:20,756 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:50:20,757 439 | vector<_Tp, _Alloc>:: 2023-09-13T09:50:20,758 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:21,007 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Atom}; _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-13T09:50:21,008 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-13T09:50:21,008 inlined from ‘void gemmi::Selection::add_matching_children(const T&, T&) [with T = gemmi::Residue]’ at include/gemmi/select.hpp:182:36, 2023-09-13T09:50:21,009 inlined from ‘void gemmi::Selection::add_matching_children(const T&, T&) [with T = gemmi::Chain]’ at include/gemmi/select.hpp:183:30, 2023-09-13T09:50:21,010 inlined from ‘void gemmi::Selection::add_matching_children(const T&, T&) [with T = gemmi::Model]’ at include/gemmi/select.hpp:183:30: 2023-09-13T09:50:21,010 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:21,011 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T09:50:21,011 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:21,552 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Position; _Alloc = std::allocator]’, 2023-09-13T09:50:21,552 inlined from ‘bool pybind11::detail::list_caster::load(pybind11::handle, bool) [with Type = std::vector; Value = gemmi::Position]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl.h:180:28: 2023-09-13T09:50:21,553 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:21,553 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:50:21,557 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:50:23,076 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2023-09-13T09:50:23,076 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:50:23,077 439 | vector<_Tp, _Alloc>:: 2023-09-13T09:50:23,078 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:23,149 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, 2023-09-13T09:50:23,150 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-13T09:50:23,151 inlined from ‘bool pybind11::detail::list_caster::load(pybind11::handle, bool) [with Type = std::vector; Value = double]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl.h:180:28: 2023-09-13T09:50:23,151 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:23,152 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T09:50:23,153 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:24,419 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*]’: 2023-09-13T09:50:24,420 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:24,420 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-13T09:50:24,421 | ^~~~~~~~~~~~~~~~ 2023-09-13T09:50:24,422 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:24,505 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:24,506 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:24,507 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*; _Tp = gemmi::RefinementInfo::Restr]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:24,507 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-13T09:50:24,508 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-13T09:50:24,508 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:24,509 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:24,510 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:24,598 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*]’: 2023-09-13T09:50:24,599 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:24,599 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-13T09:50:24,600 | ^~~~~~~~~~~~~~~~ 2023-09-13T09:50:24,601 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:24,650 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’: 2023-09-13T09:50:24,651 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:24,652 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:24,653 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:24,654 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:24,655 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*; _Tp = gemmi::DiffractionInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:24,655 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:50:24,656 inlined from ‘gemmi::CrystalInfo::CrystalInfo(const gemmi::CrystalInfo&)’ at include/gemmi/metadata.hpp:79:8, 2023-09-13T09:50:24,656 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::CrystalInfo; _Args = {const gemmi::CrystalInfo&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-13T09:50:24,657 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21: 2023-09-13T09:50:24,658 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:24,658 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:24,659 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:24,766 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:24,767 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:24,767 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*; _Tp = gemmi::DiffractionInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:24,768 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-13T09:50:24,769 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-13T09:50:24,769 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:24,770 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:24,770 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:24,989 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:24,989 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:24,990 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; _Tp = gemmi::CrystalInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:24,990 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-13T09:50:24,991 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-13T09:50:24,991 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:24,992 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:24,993 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:24,995 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:24,995 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:24,996 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*; _Tp = gemmi::DiffractionInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:24,997 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:50:24,997 inlined from ‘gemmi::CrystalInfo::CrystalInfo(const gemmi::CrystalInfo&)’ at include/gemmi/metadata.hpp:79:8, 2023-09-13T09:50:24,998 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::CrystalInfo; _Args = {gemmi::CrystalInfo&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-13T09:50:24,998 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::CrystalInfo*; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21, 2023-09-13T09:50:24,999 inlined from ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::CrystalInfo*; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’ at /usr/include/c++/12/bits/stl_uninitialized.h:137:32, 2023-09-13T09:50:24,999 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::CrystalInfo*; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:25,000 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = gemmi::CrystalInfo*; _ForwardIterator = gemmi::CrystalInfo*; _Tp = gemmi::CrystalInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:25,001 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:251:35: 2023-09-13T09:50:25,001 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:25,002 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:25,002 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:25,161 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’: 2023-09-13T09:50:25,162 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:25,163 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-13T09:50:25,163 | ^~~~~~~~~~~~~~~~ 2023-09-13T09:50:25,164 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:25,244 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:25,244 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:25,245 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:25,245 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-13T09:50:25,246 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-13T09:50:25,246 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:25,247 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:25,248 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:25,329 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:25,330 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:25,330 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:25,331 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:50:25,332 inlined from ‘gemmi::Assembly::Gen::Gen(const gemmi::Assembly::Gen&)’ at include/gemmi/metadata.hpp:320:10, 2023-09-13T09:50:25,332 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::Assembly::Gen; _Args = {const gemmi::Assembly::Gen&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-13T09:50:25,333 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Gen*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21: 2023-09-13T09:50:25,334 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:25,334 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:25,335 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:25,505 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:25,506 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:25,507 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:25,507 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:50:25,508 inlined from ‘gemmi::Assembly::Gen::Gen(const gemmi::Assembly::Gen&)’ at include/gemmi/metadata.hpp:320:10, 2023-09-13T09:50:25,509 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::Assembly::Gen; _Args = {gemmi::Assembly::Gen&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-13T09:50:25,509 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21, 2023-09-13T09:50:25,510 inlined from ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*; bool _TrivialValueTypes = false]’ at /usr/include/c++/12/bits/stl_uninitialized.h:137:32, 2023-09-13T09:50:25,511 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:25,511 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*; _Tp = gemmi::Assembly::Gen]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:25,512 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Gen; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:251:35: 2023-09-13T09:50:25,513 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:25,514 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:25,514 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:25,669 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’: 2023-09-13T09:50:25,670 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:25,671 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-13T09:50:25,671 | ^~~~~~~~~~~~~~~~ 2023-09-13T09:50:25,672 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:25,896 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’: 2023-09-13T09:50:25,897 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:25,898 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:25,977 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:25,978 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:25,979 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*; _Tp = gemmi::RefinementInfo::Restr]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:25,979 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:50:25,980 inlined from ‘gemmi::RefinementInfo::RefinementInfo(const gemmi::RefinementInfo&)’ at include/gemmi/metadata.hpp:117:8: 2023-09-13T09:50:25,981 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:25,981 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:25,983 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:25,983 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:25,984 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:25,984 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; _Tp = gemmi::TlsGroup]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:25,985 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:50:25,986 inlined from ‘gemmi::RefinementInfo::RefinementInfo(const gemmi::RefinementInfo&)’ at include/gemmi/metadata.hpp:117:8: 2023-09-13T09:50:25,986 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:25,987 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:25,988 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:26,058 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’: 2023-09-13T09:50:26,058 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:26,059 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-13T09:50:26,060 | ^~~~~~~~~~~~~~~~ 2023-09-13T09:50:26,060 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:26,105 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:26,106 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:26,107 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; _Tp = gemmi::ExperimentInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:26,107 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:50:26,109 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-13T09:50:26,109 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:26,110 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:26,110 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:26,111 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:26,111 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:26,112 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; _Tp = gemmi::CrystalInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:26,112 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:50:26,113 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-13T09:50:26,113 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:26,114 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:26,115 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:26,115 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:26,116 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:26,117 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; _Tp = gemmi::RefinementInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:26,117 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:50:26,118 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-13T09:50:26,119 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:26,119 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:26,120 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:26,262 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:26,263 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:26,263 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; _Tp = gemmi::NcsOp]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:26,264 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:50:26,264 inlined from ‘gemmi::Structure::Structure(const gemmi::Structure&)’ at include/gemmi/model.hpp:814:8: 2023-09-13T09:50:26,265 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:26,266 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:26,266 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:26,267 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:26,268 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:26,268 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; _Tp = gemmi::Connection]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:26,269 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:50:26,270 inlined from ‘gemmi::Structure::Structure(const gemmi::Structure&)’ at include/gemmi/model.hpp:814:8: 2023-09-13T09:50:26,271 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:26,271 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:26,272 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:26,272 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:26,273 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:26,273 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; _Tp = gemmi::Assembly]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:26,274 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:50:26,274 inlined from ‘gemmi::Structure::Structure(const gemmi::Structure&)’ at include/gemmi/model.hpp:814:8: 2023-09-13T09:50:26,275 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:26,276 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:26,277 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:26,501 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:26,501 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:26,502 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; _Tp = gemmi::TlsGroup]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:26,503 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-13T09:50:26,503 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-13T09:50:26,504 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:26,504 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:26,505 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:26,665 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:26,666 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:26,667 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; _Tp = gemmi::RefinementInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:26,667 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-13T09:50:26,668 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-13T09:50:26,668 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:26,668 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:26,669 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:27,902 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:27,902 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:27,903 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; _Tp = gemmi::NcsOp]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:27,903 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-13T09:50:27,904 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44, 2023-09-13T09:50:27,905 inlined from ‘gemmi::Structure gemmi::Structure::empty_copy() const’ at include/gemmi/model.hpp:931:14: 2023-09-13T09:50:27,906 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:27,906 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:27,907 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:27,910 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:27,910 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:27,911 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; _Tp = gemmi::Connection]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:27,912 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-13T09:50:27,912 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44, 2023-09-13T09:50:27,913 inlined from ‘gemmi::Structure gemmi::Structure::empty_copy() const’ at include/gemmi/model.hpp:933:22: 2023-09-13T09:50:27,914 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:27,915 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:27,915 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:27,921 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’, 2023-09-13T09:50:27,922 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:50:27,922 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; _Tp = gemmi::Assembly]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:50:27,923 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-13T09:50:27,924 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44, 2023-09-13T09:50:27,924 inlined from ‘gemmi::Structure gemmi::Structure::empty_copy() const’ at include/gemmi/model.hpp:936:21: 2023-09-13T09:50:27,925 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:50:27,925 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:50:27,926 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:50:29,704 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/ccp4.cpp -o build/temp.linux-armv7l-cpython-311/python/ccp4.o -DVERSION_INFO=\"0.4.4\" -std=c++14 -fvisibility=hidden -g0 2023-09-13T09:51:09,809 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/cif.cpp -o build/temp.linux-armv7l-cpython-311/python/cif.o -DVERSION_INFO=\"0.4.4\" -std=c++14 -fvisibility=hidden -g0 2023-09-13T09:52:06,939 In file included from /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../attr.h:14, 2023-09-13T09:52:06,940 from /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/class.h:12, 2023-09-13T09:52:06,940 from /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:13, 2023-09-13T09:52:06,941 from python/common.h:3, 2023-09-13T09:52:06,941 from python/cif.cpp:9: 2023-09-13T09:52:06,942 In static member function ‘static pybind11::handle pybind11::detail::array_caster::cast(T_*, pybind11::return_value_policy, pybind11::handle) [with T_ = std::array, 2>; typename std::enable_if::type>::value, int>::type = 0; ArrayType = std::array, 2>; Value = std::__cxx11::basic_string; bool Resizable = false; unsigned int Size = 2]’, 2023-09-13T09:52:06,943 inlined from ‘pybind11::cpp_function::initialize&, std::array, 2>*, gemmi::cif::Item&>(const add_cif(pybind11::module&)::&, std::array, 2>* (*)(gemmi::cif::Item&))::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-13T09:52:06,943 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize&, std::array, 2>*, gemmi::cif::Item&>(const add_cif(pybind11::module&)::&, std::array, 2>* (*)(gemmi::cif::Item&))::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:52:06,944 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:102:13: warning: ‘void operator delete(void*, std::size_t)’ called on pointer ‘args_converter.pybind11::detail::argument_loader::argcasters.std::tuple >::.std::_Tuple_impl<0, pybind11::detail::type_caster >::.std::_Head_base<0, pybind11::detail::type_caster, false>::_M_head_impl.pybind11::detail::type_caster::.pybind11::detail::type_caster_base::.pybind11::detail::type_caster_generic::value’ with nonzero offset 8 [-Wfree-nonheap-object] 2023-09-13T09:52:06,945 102 | delete src; \ 2023-09-13T09:52:06,945 | ^~~~~~~~~~ 2023-09-13T09:52:06,946 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl.h:275:5: note: in expansion of macro ‘PYBIND11_TYPE_CASTER’ 2023-09-13T09:52:06,947 275 | PYBIND11_TYPE_CASTER(ArrayType, 2023-09-13T09:52:06,947 | ^~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:52:14,318 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/elem.cpp -o build/temp.linux-armv7l-cpython-311/python/elem.o -DVERSION_INFO=\"0.4.4\" -std=c++14 -fvisibility=hidden -g0 2023-09-13T09:52:42,500 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/gemmi.cpp -o build/temp.linux-armv7l-cpython-311/python/gemmi.o -DVERSION_INFO=\"0.4.4\" -std=c++14 -fvisibility=hidden -g0 2023-09-13T09:53:13,238 In file included from /usr/include/c++/12/vector:70, 2023-09-13T09:53:13,239 from /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/common.h:314, 2023-09-13T09:53:13,239 from /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../attr.h:13, 2023-09-13T09:53:13,240 from /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/class.h:12, 2023-09-13T09:53:13,241 from /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:13, 2023-09-13T09:53:13,242 from python/common.h:3, 2023-09-13T09:53:13,242 from python/gemmi.cpp:3: 2023-09-13T09:53:13,243 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::SmallStructure::Site&}; _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator]’: 2023-09-13T09:53:13,243 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:53:13,244 439 | vector<_Tp, _Alloc>:: 2023-09-13T09:53:13,244 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:53:13,430 In file included from /usr/include/c++/12/vector:64: 2023-09-13T09:53:13,431 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator]’, 2023-09-13T09:53:13,432 inlined from ‘std::vector gemmi::SmallStructure::get_all_unit_cell_sites() const’ at include/gemmi/small.hpp:95:18: 2023-09-13T09:53:13,432 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:53:13,433 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:53:13,433 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:53:13,434 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator]’, 2023-09-13T09:53:13,435 inlined from ‘std::vector gemmi::SmallStructure::get_all_unit_cell_sites() const’ at include/gemmi/small.hpp:102:20: 2023-09-13T09:53:13,436 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:53:13,436 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:53:13,437 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:53:18,635 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/grid.cpp -o build/temp.linux-armv7l-cpython-311/python/grid.o -DVERSION_INFO=\"0.4.4\" -std=c++14 -fvisibility=hidden -g0 2023-09-13T09:54:32,359 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/hkl.cpp -o build/temp.linux-armv7l-cpython-311/python/hkl.o -DVERSION_INFO=\"0.4.4\" -std=c++14 -fvisibility=hidden -g0 2023-09-13T09:55:08,662 In file included from /usr/include/c++/12/vector:70, 2023-09-13T09:55:08,662 from include/gemmi/unitcell.hpp:9, 2023-09-13T09:55:08,663 from python/hkl.cpp:3: 2023-09-13T09:55:08,664 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Mat33&, gemmi::Vec3&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-13T09:55:08,664 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:55:08,665 439 | vector<_Tp, _Alloc>:: 2023-09-13T09:55:08,665 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:55:08,768 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mat33&, gemmi::Vec3&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-13T09:55:08,768 inlined from ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const SG*) [with SG = gemmi::SpaceGroup]’ at include/gemmi/unitcell.hpp:249:26: 2023-09-13T09:55:08,769 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:55:08,770 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T09:55:08,770 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:55:18,386 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::cif::Block}; _Tp = gemmi::ReflnBlock; _Alloc = std::allocator]’: 2023-09-13T09:55:18,386 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:55:18,387 439 | vector<_Tp, _Alloc>:: 2023-09-13T09:55:18,388 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:55:18,582 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::cif::Block}; _Tp = gemmi::ReflnBlock; _Alloc = std::allocator]’, 2023-09-13T09:55:18,583 inlined from ‘std::vector gemmi::as_refln_blocks(std::vector&&)’ at include/gemmi/refln.hpp:147:19: 2023-09-13T09:55:18,583 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:55:18,584 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T09:55:18,585 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:55:18,802 In file included from /usr/include/c++/12/algorithm:61, 2023-09-13T09:55:18,803 from include/gemmi/util.hpp:8, 2023-09-13T09:55:18,804 from include/gemmi/cifdoc.hpp:11, 2023-09-13T09:55:18,804 from include/gemmi/refln.hpp:9, 2023-09-13T09:55:18,805 from python/hkl.cpp:4: 2023-09-13T09:55:18,806 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2023-09-13T09:55:18,806 inlined from ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1844:5, 2023-09-13T09:55:18,807 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2023-09-13T09:55:18,807 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1932:5, 2023-09-13T09:55:18,808 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = gemmi::impl_fprim::Point*]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2023-09-13T09:55:18,809 inlined from ‘void gemmi::impl_fprim::cromer(int, double, int, const OrbitalCoef*, double*, double*)’ at include/gemmi/fprime.hpp:161:14: 2023-09-13T09:55:18,810 /usr/include/c++/12/bits/stl_algo.h:1849:32: warning: array subscript 16 is outside array bounds of ‘gemmi::impl_fprim::Point [11]’ [-Warray-bounds] 2023-09-13T09:55:18,810 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2023-09-13T09:55:18,811 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:55:18,811 In file included from python/hkl.cpp:7: 2023-09-13T09:55:18,812 include/gemmi/fprime.hpp: In function ‘void gemmi::impl_fprim::cromer(int, double, int, const OrbitalCoef*, double*, double*)’: 2023-09-13T09:55:18,812 include/gemmi/fprime.hpp:153:11: note: at offset 256 into object ‘lndata’ of size 176 2023-09-13T09:55:18,813 153 | Point lndata[11]; 2023-09-13T09:55:18,814 | ^~~~~~ 2023-09-13T09:55:20,720 In file included from python/common.h:3, 2023-09-13T09:55:20,721 from python/hkl.cpp:10: 2023-09-13T09:55:20,721 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::ReflnBlock&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::ReflnBlock&; Extra = {}]’: 2023-09-13T09:55:20,722 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:55:20,722 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-13T09:55:20,723 | ^~~~~~~~~~~~~~~~~~ 2023-09-13T09:55:20,724 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:55:24,403 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::ReflnBlock&; Extra = {}]’, 2023-09-13T09:55:24,404 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-13T09:55:24,405 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:55:24,406 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:55:24,407 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-13T09:55:24,407 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:55:24,408 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:55:24,409 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-13T09:55:24,410 | ^ 2023-09-13T09:55:24,410 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::ReflnBlock&; Extra = {}]’, 2023-09-13T09:55:24,411 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-13T09:55:24,412 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:55:24,413 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:55:24,414 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-13T09:55:24,415 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:55:24,416 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:55:24,417 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-13T09:55:24,418 | ^ 2023-09-13T09:55:31,419 In file included from include/gemmi/fourier.hpp:24, 2023-09-13T09:55:31,420 from python/hkl.cpp:5: 2023-09-13T09:55:31,420 In member function ‘pocketfft::detail::cmplx*)this)->pocketfft::detail::cmplx::r * other))> pocketfft::detail::cmplx::operator*(const T2&) const [with T2 = float; T = float]’, 2023-09-13T09:55:31,421 inlined from ‘void pocketfft::detail::fftblue::fft(pocketfft::detail::cmplx*, T0) const [with bool fwd = true; T = float; T0 = float]’ at include/gemmi/third_party/pocketfft_hdronly.h:2258:25: 2023-09-13T09:55:31,422 include/gemmi/third_party/pocketfft_hdronly.h:234:15: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::r’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-13T09:55:31,423 234 | { return {r*other, i*other}; } 2023-09-13T09:55:31,424 | ^ 2023-09-13T09:55:31,424 include/gemmi/third_party/pocketfft_hdronly.h:234:24: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::i’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-13T09:55:31,425 234 | { return {r*other, i*other}; } 2023-09-13T09:55:31,426 | ^ 2023-09-13T09:55:31,501 In member function ‘pocketfft::detail::cmplx*)this)->pocketfft::detail::cmplx::r * other))> pocketfft::detail::cmplx::operator*(const T2&) const [with T2 = float; T = float]’, 2023-09-13T09:55:31,501 inlined from ‘void pocketfft::detail::fftblue::fft(pocketfft::detail::cmplx*, T0) const [with bool fwd = false; T = float; T0 = float]’ at include/gemmi/third_party/pocketfft_hdronly.h:2258:25: 2023-09-13T09:55:31,502 include/gemmi/third_party/pocketfft_hdronly.h:234:15: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::r’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-13T09:55:31,503 234 | { return {r*other, i*other}; } 2023-09-13T09:55:31,504 | ^ 2023-09-13T09:55:31,505 include/gemmi/third_party/pocketfft_hdronly.h:234:24: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::i’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-13T09:55:31,505 234 | { return {r*other, i*other}; } 2023-09-13T09:55:31,506 | ^ 2023-09-13T09:55:35,513 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/meta.cpp -o build/temp.linux-armv7l-cpython-311/python/meta.o -DVERSION_INFO=\"0.4.4\" -std=c++14 -fvisibility=hidden -g0 2023-09-13T09:56:22,023 In file included from /usr/include/c++/12/vector:70, 2023-09-13T09:56:22,023 from /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/common.h:314, 2023-09-13T09:56:22,024 from /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../attr.h:13, 2023-09-13T09:56:22,025 from /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/class.h:12, 2023-09-13T09:56:22,025 from /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:13, 2023-09-13T09:56:22,026 from python/common.h:3, 2023-09-13T09:56:22,027 from python/meta.cpp:3: 2023-09-13T09:56:22,027 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-13T09:56:22,028 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:56:22,029 175 | vector<_Tp, _Alloc>:: 2023-09-13T09:56:22,029 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:22,489 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’: 2023-09-13T09:56:22,490 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:56:27,954 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Assembly::Operator}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-13T09:56:27,955 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:56:27,956 439 | vector<_Tp, _Alloc>:: 2023-09-13T09:56:27,956 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:28,079 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Assembly::Operator&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Assembly::Operator&; Extra = {}]’: 2023-09-13T09:56:28,080 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:28,081 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-13T09:56:28,081 | ^~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:28,082 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:28,327 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Assembly&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Assembly&; Extra = {}]’: 2023-09-13T09:56:28,328 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:28,328 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:28,840 In file included from /usr/include/c++/12/vector:64: 2023-09-13T09:56:28,840 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-13T09:56:28,841 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-13T09:56:28,842 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:28,843 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:28,843 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:56:28,844 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:28,845 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:28,845 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:56:28,846 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:28,846 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-13T09:56:28,847 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-13T09:56:28,847 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:28,848 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:28,849 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:56:28,850 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:28,850 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:28,851 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:56:28,852 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:29,158 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-13T09:56:29,159 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-13T09:56:29,159 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:29,160 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:29,161 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:56:29,161 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:29,162 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:29,163 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:56:29,163 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:29,164 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-13T09:56:29,164 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-13T09:56:29,165 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:29,166 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:29,166 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:56:29,167 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:29,168 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:29,168 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:56:29,169 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:29,863 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Assembly::Operator}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-13T09:56:29,864 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-13T09:56:29,864 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:156:25, 2023-09-13T09:56:29,865 inlined from ‘pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/init.h:303:33, 2023-09-13T09:56:29,865 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:29,866 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:29,867 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:56:29,867 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:29,868 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:29,869 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T09:56:29,870 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:29,872 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Assembly::Operator}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-13T09:56:29,873 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-13T09:56:29,873 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:156:25, 2023-09-13T09:56:29,874 inlined from ‘pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/init.h:303:33, 2023-09-13T09:56:29,875 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:29,875 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:29,876 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:56:29,877 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:29,878 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:29,878 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T09:56:29,879 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:32,474 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Assembly&; Extra = {}]’, 2023-09-13T09:56:32,475 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-13T09:56:32,476 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:56:32,476 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:56:32,477 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-13T09:56:32,478 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:32,478 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:32,479 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-13T09:56:32,480 | ^ 2023-09-13T09:56:32,481 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Assembly&; Extra = {}]’, 2023-09-13T09:56:32,481 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-13T09:56:32,482 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:56:32,482 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:56:32,483 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-13T09:56:32,484 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:32,484 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:32,485 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-13T09:56:32,486 | ^ 2023-09-13T09:56:32,545 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Assembly::Operator&; Extra = {}]’, 2023-09-13T09:56:32,546 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-13T09:56:32,546 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:56:32,547 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:56:32,548 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-13T09:56:32,548 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:32,549 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:32,550 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-13T09:56:32,550 | ^ 2023-09-13T09:56:32,551 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Assembly::Operator&; Extra = {}]’, 2023-09-13T09:56:32,551 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-13T09:56:32,552 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:56:32,553 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:56:32,553 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-13T09:56:32,554 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:32,555 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:32,555 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-13T09:56:32,556 | ^ 2023-09-13T09:56:33,568 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Assembly::Operator&}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-13T09:56:33,569 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:56:33,570 439 | vector<_Tp, _Alloc>:: 2023-09-13T09:56:33,571 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:33,713 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-13T09:56:33,713 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-13T09:56:33,714 133 | vector<_Tp, _Alloc>:: 2023-09-13T09:56:33,714 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:33,717 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:33,717 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-13T09:56:33,718 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:33,854 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-13T09:56:33,855 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-13T09:56:33,855 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:33,856 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-13T09:56:33,857 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:56:33,858 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:33,859 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:33,859 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:56:33,860 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:56:33,860 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-13T09:56:33,861 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-13T09:56:33,862 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:33,862 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-13T09:56:33,863 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:56:33,864 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:33,864 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:33,865 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:56:33,866 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:56:33,986 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-13T09:56:33,987 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-13T09:56:33,987 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:33,988 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:33,989 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:56:33,989 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:33,990 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:33,991 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:56:33,991 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:56:33,992 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-13T09:56:33,993 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-13T09:56:33,993 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:33,994 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:33,995 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:56:33,995 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:33,996 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:33,997 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:56:33,997 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:56:34,135 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Assembly::Operator}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-13T09:56:34,136 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-13T09:56:34,136 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::iterable&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:177:32: 2023-09-13T09:56:34,137 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:34,138 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T09:56:34,139 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:34,448 In file included from /usr/include/c++/12/memory:66, 2023-09-13T09:56:34,449 from /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/common.h:307: 2023-09-13T09:56:34,450 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’: 2023-09-13T09:56:34,451 /usr/include/c++/12/bits/stl_uninitialized.h:163:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:34,451 163 | uninitialized_copy(_InputIterator __first, _InputIterator __last, 2023-09-13T09:56:34,452 | ^~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:34,452 /usr/include/c++/12/bits/stl_uninitialized.h:163:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:34,586 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-13T09:56:34,587 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:56:34,587 739 | vector<_Tp, _Alloc>:: 2023-09-13T09:56:34,588 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:34,589 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:34,589 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:34,590 In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’, 2023-09-13T09:56:34,591 inlined from ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:769:34: 2023-09-13T09:56:34,592 /usr/include/c++/12/bits/stl_uninitialized.h:372:37: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:34,593 372 | return std::uninitialized_copy(__first, __last, __result); 2023-09-13T09:56:34,593 | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:34,594 In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’, 2023-09-13T09:56:34,595 inlined from ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:796:38: 2023-09-13T09:56:34,595 /usr/include/c++/12/bits/stl_uninitialized.h:372:37: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:34,596 372 | return std::uninitialized_copy(__first, __last, __result); 2023-09-13T09:56:34,597 | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:34,720 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-13T09:56:34,721 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-13T09:56:34,722 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-13T09:56:34,722 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:34,723 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:34,724 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:56:34,725 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:34,725 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:56:34,726 1779 | _M_range_insert(__pos, __first, __last, 2023-09-13T09:56:34,726 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:34,727 1780 | std::__iterator_category(__first)); 2023-09-13T09:56:34,728 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:34,728 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:34,729 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-13T09:56:34,729 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-13T09:56:34,730 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-13T09:56:34,731 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:34,731 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:34,732 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:56:34,733 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:34,734 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:56:34,735 1779 | _M_range_insert(__pos, __first, __last, 2023-09-13T09:56:34,735 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:34,736 1780 | std::__iterator_category(__first)); 2023-09-13T09:56:34,736 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:34,737 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:34,824 In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’, 2023-09-13T09:56:34,825 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-13T09:56:34,825 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-13T09:56:34,826 /usr/include/c++/12/bits/stl_uninitialized.h:372:37: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:34,827 372 | return std::uninitialized_copy(__first, __last, __result); 2023-09-13T09:56:34,827 | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:35,003 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-13T09:56:35,003 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-13T09:56:35,004 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Assembly; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:56:35,004 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Assembly; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:56:35,005 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Assembly, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Assembly (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17: 2023-09-13T09:56:35,006 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:35,006 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:56:35,007 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:35,008 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-13T09:56:35,008 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-13T09:56:35,009 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Assembly; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:56:35,009 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Assembly; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:56:35,010 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Assembly, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Assembly (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40: 2023-09-13T09:56:35,011 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:35,011 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:56:35,012 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:35,201 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-13T09:56:35,202 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-13T09:56:35,202 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Assembly::Operator; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:56:35,203 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Assembly::Operator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:56:35,204 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Assembly::Operator, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Assembly::Operator (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17: 2023-09-13T09:56:35,204 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:35,205 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:56:35,206 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:35,206 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-13T09:56:35,207 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-13T09:56:35,208 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Assembly::Operator; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:56:35,208 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Assembly::Operator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:56:35,209 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Assembly::Operator, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Assembly::Operator (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40: 2023-09-13T09:56:35,210 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:35,210 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:56:35,211 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:35,398 In file included from python/meta.cpp:5: 2023-09-13T09:56:35,399 In lambda function, 2023-09-13T09:56:35,399 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:35,400 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:35,401 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:56:35,402 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:35,402 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-13T09:56:35,403 203 | v.insert(v.begin() + i, x); 2023-09-13T09:56:35,404 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:35,405 In lambda function, 2023-09-13T09:56:35,405 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:35,406 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:35,407 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:56:35,407 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:35,408 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-13T09:56:35,409 203 | v.insert(v.begin() + i, x); 2023-09-13T09:56:35,409 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:35,487 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-13T09:56:35,488 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-13T09:56:35,488 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:35,489 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:35,490 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:56:35,491 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:35,492 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:35,492 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:56:35,494 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:35,494 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-13T09:56:35,495 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-13T09:56:35,495 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:35,496 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:35,496 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:56:35,497 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:35,498 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:35,498 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:56:35,499 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:35,626 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-13T09:56:35,627 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-13T09:56:35,628 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:35,628 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:35,629 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:56:35,630 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:35,631 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:35,631 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:56:35,632 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:35,633 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-13T09:56:35,633 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-13T09:56:35,634 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:35,635 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:35,635 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:56:35,636 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:35,637 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:35,638 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:56:35,638 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:38,596 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Assembly&}; _Tp = gemmi::Assembly; _Alloc = std::allocator]’: 2023-09-13T09:56:38,596 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:56:38,597 439 | vector<_Tp, _Alloc>:: 2023-09-13T09:56:38,598 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:39,066 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’: 2023-09-13T09:56:39,066 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-13T09:56:39,067 133 | vector<_Tp, _Alloc>:: 2023-09-13T09:56:39,068 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:39,069 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:39,070 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-13T09:56:39,071 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:39,225 In lambda function, 2023-09-13T09:56:39,225 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Assembly&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:39,226 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Assembly&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:39,227 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:56:39,227 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:39,228 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-13T09:56:39,229 203 | v.insert(v.begin() + i, x); 2023-09-13T09:56:39,229 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:39,230 In lambda function, 2023-09-13T09:56:39,231 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Assembly&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:39,232 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Assembly&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:39,232 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:56:39,233 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:39,234 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-13T09:56:39,235 203 | v.insert(v.begin() + i, x); 2023-09-13T09:56:39,235 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:39,326 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-13T09:56:39,327 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-13T09:56:39,328 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:39,328 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-13T09:56:39,329 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:56:39,330 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:39,330 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:39,331 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:56:39,332 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:56:39,332 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-13T09:56:39,333 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-13T09:56:39,333 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:39,334 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-13T09:56:39,335 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:56:39,335 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:39,336 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:39,337 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:56:39,337 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:56:39,560 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-13T09:56:39,560 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-13T09:56:39,561 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Assembly&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:39,562 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Assembly&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:39,563 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:56:39,563 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:39,564 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:39,565 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:56:39,565 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:56:39,566 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-13T09:56:39,567 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-13T09:56:39,568 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Assembly&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:39,569 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Assembly&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:39,570 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:56:39,570 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:39,571 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:39,572 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:56:39,572 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:56:39,751 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly; _Alloc = std::allocator]’: 2023-09-13T09:56:39,752 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:56:39,752 739 | vector<_Tp, _Alloc>:: 2023-09-13T09:56:39,753 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:39,754 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:39,755 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:39,875 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-13T09:56:39,876 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-13T09:56:39,876 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-13T09:56:39,877 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:39,878 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:39,879 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:56:39,880 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:39,882 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:56:39,883 1779 | _M_range_insert(__pos, __first, __last, 2023-09-13T09:56:39,884 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:39,885 1780 | std::__iterator_category(__first)); 2023-09-13T09:56:39,886 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:39,887 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:39,888 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-13T09:56:39,889 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-13T09:56:39,890 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-13T09:56:39,892 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:56:39,893 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:56:39,895 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:56:39,896 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:56:39,898 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:56:39,899 1779 | _M_range_insert(__pos, __first, __last, 2023-09-13T09:56:39,901 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:39,902 1780 | std::__iterator_category(__first)); 2023-09-13T09:56:39,904 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:56:39,905 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:56:40,957 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/mol.cpp -o build/temp.linux-armv7l-cpython-311/python/mol.o -DVERSION_INFO=\"0.4.4\" -std=c++14 -fvisibility=hidden -g0 2023-09-13T09:57:41,510 In file included from /usr/include/c++/12/vector:70, 2023-09-13T09:57:41,511 from include/gemmi/model.hpp:15, 2023-09-13T09:57:41,512 from python/mol.cpp:3: 2023-09-13T09:57:41,512 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator, iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-13T09:57:41,513 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:57:41,514 189 | vector<_Tp, _Alloc>:: 2023-09-13T09:57:41,514 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:57:41,515 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:57:41,621 In file included from /usr/include/c++/12/vector:64: 2023-09-13T09:57:41,621 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-13T09:57:41,622 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Atom; F = remove_hydrogens(Residue&)::]’ at include/gemmi/util.hpp:232:10, 2023-09-13T09:57:41,622 inlined from ‘void gemmi::remove_hydrogens(T&) [with T = Residue]’ at include/gemmi/polyheur.hpp:311:19, 2023-09-13T09:57:41,623 inlined from ‘void gemmi::remove_hydrogens(T&) [with T = Chain]’ at include/gemmi/polyheur.hpp:308:21, 2023-09-13T09:57:41,623 inlined from ‘void gemmi::remove_hydrogens(T&) [with T = Model]’ at include/gemmi/polyheur.hpp:308:21, 2023-09-13T09:57:41,624 inlined from ‘void gemmi::remove_hydrogens(T&) [with T = Structure]’ at include/gemmi/polyheur.hpp:308:21: 2023-09-13T09:57:41,624 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:57:41,625 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-13T09:57:41,625 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:57:45,140 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’: 2023-09-13T09:57:45,140 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:57:45,141 739 | vector<_Tp, _Alloc>:: 2023-09-13T09:57:45,142 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:57:45,143 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:57:45,143 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:57:46,128 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-13T09:57:46,129 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Atom; F = trim_to_alanine(Residue&)::]’ at include/gemmi/util.hpp:232:10, 2023-09-13T09:57:46,129 inlined from ‘bool gemmi::trim_to_alanine(Residue&)’ at include/gemmi/polyheur.hpp:362:19: 2023-09-13T09:57:46,130 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:57:46,131 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-13T09:57:46,131 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:57:53,477 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::FTransform&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-13T09:57:53,478 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:57:53,479 439 | vector<_Tp, _Alloc>:: 2023-09-13T09:57:53,479 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:57:53,533 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Transform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-13T09:57:53,533 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:57:53,771 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-13T09:57:53,771 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:57:53,772 175 | vector<_Tp, _Alloc>:: 2023-09-13T09:57:53,772 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:57:53,810 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-13T09:57:53,811 inlined from ‘void remove_child(P&, int) [with P = gemmi::Residue]’ at python/mol.cpp:43:17: 2023-09-13T09:57:53,811 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:57:53,812 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:57:53,813 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:57:53,912 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-13T09:57:53,913 inlined from ‘void gemmi::remove_alternative_conformations(T&) [with T = Chain]’ at include/gemmi/polyheur.hpp:300:28: 2023-09-13T09:57:53,913 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:57:53,914 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:57:53,915 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:57:56,888 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Mat33&, gemmi::Vec3&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-13T09:57:56,889 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:57:56,889 439 | vector<_Tp, _Alloc>:: 2023-09-13T09:57:56,890 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:57:56,995 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mat33&, gemmi::Vec3&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-13T09:57:56,996 inlined from ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const SG*) [with SG = gemmi::SpaceGroup]’ at include/gemmi/unitcell.hpp:249:26: 2023-09-13T09:57:56,996 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:57:56,997 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T09:57:56,998 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:57:57,128 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::FTransform&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-13T09:57:57,129 inlined from ‘void gemmi::Structure::setup_cell_images()’ at include/gemmi/model.hpp:995:31: 2023-09-13T09:57:57,129 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:57:57,130 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T09:57:57,130 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:57:57,131 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Transform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-13T09:57:57,131 inlined from ‘void gemmi::Structure::setup_cell_images()’ at include/gemmi/model.hpp:997:33: 2023-09-13T09:57:57,132 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:57:57,132 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T09:57:57,133 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:57:59,911 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-13T09:57:59,912 inlined from ‘void delitem_range(std::vector&, pybind11::ssize_t, pybind11::ssize_t) [with Item = gemmi::Atom]’ at python/common.h:54:14, 2023-09-13T09:57:59,913 inlined from ‘void delitem_slice(Items&, const pybind11::slice&) [with Items = std::vector]’ at python/common.h:64:18, 2023-09-13T09:57:59,913 inlined from ‘void remove_children(P&, pybind11::slice) [with P = gemmi::Residue]’ at python/mol.cpp:47:16: 2023-09-13T09:57:59,914 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:57:59,914 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-13T09:57:59,915 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:57:59,915 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-13T09:57:59,916 inlined from ‘void delitem_at_index(std::vector&, pybind11::ssize_t) [with Item = gemmi::Atom]’ at python/common.h:49:14, 2023-09-13T09:57:59,917 inlined from ‘void delitem_slice(Items&, const pybind11::slice&) [with Items = std::vector]’ at python/common.h:67:23, 2023-09-13T09:57:59,917 inlined from ‘void remove_children(P&, pybind11::slice) [with P = gemmi::Residue]’ at python/mol.cpp:47:16: 2023-09-13T09:57:59,918 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:57:59,918 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:57:59,919 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:16,053 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-13T09:58:16,053 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:58:16,054 439 | vector<_Tp, _Alloc>:: 2023-09-13T09:58:16,055 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:16,348 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-13T09:58:16,349 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-13T09:58:16,349 133 | vector<_Tp, _Alloc>:: 2023-09-13T09:58:16,350 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:16,353 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:16,354 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-13T09:58:16,354 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:16,703 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-13T09:58:16,703 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:58:16,704 739 | vector<_Tp, _Alloc>:: 2023-09-13T09:58:16,704 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:16,705 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:16,706 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:16,984 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-13T09:58:16,984 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:58:16,985 175 | vector<_Tp, _Alloc>:: 2023-09-13T09:58:16,986 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:17,115 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::NcsOp&}; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’: 2023-09-13T09:58:17,115 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:58:17,116 439 | vector<_Tp, _Alloc>:: 2023-09-13T09:58:17,116 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:17,189 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’: 2023-09-13T09:58:17,190 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-13T09:58:17,190 133 | vector<_Tp, _Alloc>:: 2023-09-13T09:58:17,191 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:17,192 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:17,193 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-13T09:58:17,193 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:17,315 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’: 2023-09-13T09:58:17,315 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:58:17,316 175 | vector<_Tp, _Alloc>:: 2023-09-13T09:58:17,317 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:21,412 In file included from python/common.h:3, 2023-09-13T09:58:21,413 from python/mol.cpp:9: 2023-09-13T09:58:21,413 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, const gemmi::Atom&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = const gemmi::Atom&; Extra = {}]’: 2023-09-13T09:58:21,414 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:21,415 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-13T09:58:21,415 | ^~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:21,416 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:21,960 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access, gemmi::Atom> >, gemmi::Atom&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = gemmi::BidirIterator, gemmi::Atom> >; Sentinel = gemmi::BidirIterator, gemmi::Atom> >; ValueType = gemmi::Atom&; Extra = {}]’: 2023-09-13T09:58:21,961 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-13T09:58:21,962 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-13T09:58:32,362 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Connection&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Connection&; Extra = {}]’: 2023-09-13T09:58:32,363 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:32,363 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:32,488 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::NcsOp&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::NcsOp&; Extra = {}]’: 2023-09-13T09:58:32,489 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:32,490 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:33,192 In file included from /usr/include/c++/12/vector:63: 2023-09-13T09:58:33,192 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’: 2023-09-13T09:58:33,193 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:33,193 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-13T09:58:33,194 | ^~~~~~~~~~~~~~~~ 2023-09-13T09:58:33,195 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:34,265 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Atom}; _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-13T09:58:34,266 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:58:34,267 439 | vector<_Tp, _Alloc>:: 2023-09-13T09:58:34,268 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:34,392 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_insert_rval(const_iterator, value_type&&) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-13T09:58:34,393 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, value_type&&) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1389:30, 2023-09-13T09:58:34,394 inlined from ‘C& add_item(T&, C, int) [with T = std::vector; C = gemmi::Atom]’ at python/mol.cpp:28:27, 2023-09-13T09:58:34,394 inlined from ‘C& add_child(P&, C, int) [with P = gemmi::Residue; C = gemmi::Atom]’ at python/mol.cpp:33:18: 2023-09-13T09:58:34,395 /usr/include/c++/12/bits/vector.tcc:366:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:34,395 366 | _M_realloc_insert(begin() + __n, std::move(__v)); 2023-09-13T09:58:34,395 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:36,399 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-13T09:58:36,400 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-13T09:58:36,400 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:36,401 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:36,401 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:58:36,403 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:36,403 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:36,404 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:58:36,405 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:36,406 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-13T09:58:36,406 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-13T09:58:36,407 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:36,407 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:36,408 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:58:36,408 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:36,409 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:36,410 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:58:36,411 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:36,634 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-13T09:58:36,635 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-13T09:58:36,636 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:36,636 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-13T09:58:36,637 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:58:36,638 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:36,639 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:36,640 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:58:36,640 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:58:36,641 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-13T09:58:36,641 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-13T09:58:36,642 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:36,643 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-13T09:58:36,643 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:58:36,644 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:36,645 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:36,646 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:58:36,646 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:58:36,728 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-13T09:58:36,729 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-13T09:58:36,729 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-13T09:58:36,730 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:36,730 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:36,731 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:58:36,732 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:36,733 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:58:36,733 1779 | _M_range_insert(__pos, __first, __last, 2023-09-13T09:58:36,734 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:36,735 1780 | std::__iterator_category(__first)); 2023-09-13T09:58:36,735 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:36,736 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:36,736 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-13T09:58:36,737 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-13T09:58:36,737 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-13T09:58:36,738 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:36,738 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:36,739 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:58:36,740 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:36,740 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:58:36,741 1779 | _M_range_insert(__pos, __first, __last, 2023-09-13T09:58:36,742 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:36,742 1780 | std::__iterator_category(__first)); 2023-09-13T09:58:36,743 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:36,743 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:36,851 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-13T09:58:36,852 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-13T09:58:36,852 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:36,853 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:36,854 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:58:36,854 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:36,855 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:36,856 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:58:36,856 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:58:36,857 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-13T09:58:36,858 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-13T09:58:36,858 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:36,859 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:36,860 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:58:36,860 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:36,861 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:36,862 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:58:36,862 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:58:36,940 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-13T09:58:36,941 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-13T09:58:36,942 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:36,943 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:36,943 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:58:36,944 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:36,944 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:36,945 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:58:36,946 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:36,946 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-13T09:58:36,947 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-13T09:58:36,947 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:36,948 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:36,949 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:58:36,949 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:36,950 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:36,951 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:58:36,951 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:37,217 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-13T09:58:37,217 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-13T09:58:37,218 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:37,218 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-13T09:58:37,219 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:58:37,220 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:37,221 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:37,221 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:58:37,222 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:58:37,223 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-13T09:58:37,224 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-13T09:58:37,225 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:37,225 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-13T09:58:37,226 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:58:37,226 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:37,227 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:37,227 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:58:37,228 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:58:37,311 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-13T09:58:37,312 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-13T09:58:37,312 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-13T09:58:37,313 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:37,313 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:37,314 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:58:37,315 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:37,315 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:58:37,316 1779 | _M_range_insert(__pos, __first, __last, 2023-09-13T09:58:37,316 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:37,317 1780 | std::__iterator_category(__first)); 2023-09-13T09:58:37,318 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:37,318 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:37,319 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-13T09:58:37,320 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-13T09:58:37,321 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-13T09:58:37,321 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:37,322 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:37,322 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:58:37,323 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:37,324 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:58:37,325 1779 | _M_range_insert(__pos, __first, __last, 2023-09-13T09:58:37,325 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:37,326 1780 | std::__iterator_category(__first)); 2023-09-13T09:58:37,327 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:37,327 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:37,429 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-13T09:58:37,430 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-13T09:58:37,430 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Connection&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:37,431 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Connection&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:37,431 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:58:37,432 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:37,433 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:37,433 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:58:37,434 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:58:37,435 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-13T09:58:37,435 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-13T09:58:37,436 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Connection&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:37,437 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Connection&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:37,437 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:58:37,438 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:37,439 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:37,439 1287 | _M_realloc_insert(end(), __x); 2023-09-13T09:58:37,440 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T09:58:41,978 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = gemmi::BidirIterator, gemmi::Atom> >; Sentinel = gemmi::BidirIterator, gemmi::Atom> >; ValueType = gemmi::Atom&; Extra = {}]’, 2023-09-13T09:58:41,979 inlined from ‘pybind11::iterator pybind11::make_iterator(Type&, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Type = gemmi::UniqProxy; Extra = {}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2457:74, 2023-09-13T09:58:41,979 inlined from ‘add_mol(pybind11::module&)::&)>’ at python/mol.cpp:238:38, 2023-09-13T09:58:41,980 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = add_mol(pybind11::module&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {gemmi::UniqProxy > >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:58:41,981 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = add_mol(pybind11::module&)::&)>&; Args = {gemmi::UniqProxy > >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:58:41,981 inlined from ‘pybind11::cpp_function::initialize&)>, pybind11::iterator, gemmi::UniqProxy > >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&)>&&, pybind11::iterator (*)(gemmi::UniqProxy&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-13T09:58:41,982 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize&)>, pybind11::iterator, gemmi::UniqProxy > >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&)>&&, pybind11::iterator (*)(gemmi::UniqProxy&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:41,982 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-13T09:58:41,983 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-13T09:58:41,983 | ^ 2023-09-13T09:58:41,984 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-13T09:58:41,985 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-13T09:58:41,985 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = gemmi::BidirIterator, gemmi::Atom> >; Sentinel = gemmi::BidirIterator, gemmi::Atom> >; ValueType = gemmi::Atom&; Extra = {}]’, 2023-09-13T09:58:41,986 inlined from ‘pybind11::iterator pybind11::make_iterator(Type&, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Type = gemmi::UniqProxy; Extra = {}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2457:74, 2023-09-13T09:58:41,987 inlined from ‘add_mol(pybind11::module&)::&)>’ at python/mol.cpp:238:38, 2023-09-13T09:58:41,987 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = add_mol(pybind11::module&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {gemmi::UniqProxy > >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:58:41,988 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = add_mol(pybind11::module&)::&)>&; Args = {gemmi::UniqProxy > >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:58:41,988 inlined from ‘pybind11::cpp_function::initialize&)>, pybind11::iterator, gemmi::UniqProxy > >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&)>&&, pybind11::iterator (*)(gemmi::UniqProxy&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-13T09:58:41,989 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize&)>, pybind11::iterator, gemmi::UniqProxy > >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&)>&&, pybind11::iterator (*)(gemmi::UniqProxy&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:41,989 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-13T09:58:41,990 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-13T09:58:41,991 | ^ 2023-09-13T09:58:41,991 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-13T09:58:41,992 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-13T09:58:45,295 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::NcsOp&; Extra = {}]’, 2023-09-13T09:58:45,296 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-13T09:58:45,297 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:58:45,297 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:58:45,298 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-13T09:58:45,299 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:45,300 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:45,300 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-13T09:58:45,301 | ^ 2023-09-13T09:58:45,302 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::NcsOp&; Extra = {}]’, 2023-09-13T09:58:45,302 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-13T09:58:45,303 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:58:45,304 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:58:45,304 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-13T09:58:45,305 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:45,305 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:45,306 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-13T09:58:45,306 | ^ 2023-09-13T09:58:45,336 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Connection&; Extra = {}]’, 2023-09-13T09:58:45,336 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-13T09:58:45,337 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:58:45,338 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:58:45,339 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-13T09:58:45,339 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:45,340 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:45,340 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-13T09:58:45,341 | ^ 2023-09-13T09:58:45,341 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Connection&; Extra = {}]’, 2023-09-13T09:58:45,342 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-13T09:58:45,343 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:58:45,344 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:58:45,344 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-13T09:58:45,345 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:45,346 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:45,347 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-13T09:58:45,347 | ^ 2023-09-13T09:58:47,348 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = const gemmi::Atom&; Extra = {}]’, 2023-09-13T09:58:47,348 inlined from ‘pybind11::iterator pybind11::make_iterator(Type&, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Type = const std::vector; Extra = {}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2457:74, 2023-09-13T09:58:47,349 inlined from ‘add_mol(pybind11::module&)::’ at python/mol.cpp:383:43, 2023-09-13T09:58:47,349 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = add_mol(pybind11::module&)::&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {const gemmi::Residue&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:58:47,350 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = add_mol(pybind11::module&)::&; Args = {const gemmi::Residue&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:58:47,351 inlined from ‘pybind11::cpp_function::initialize, pybind11::iterator, const gemmi::Residue&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&&, pybind11::iterator (*)(const gemmi::Residue&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-13T09:58:47,351 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::iterator, const gemmi::Residue&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&&, pybind11::iterator (*)(const gemmi::Residue&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:47,352 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:47,352 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-13T09:58:47,353 | ^ 2023-09-13T09:58:47,353 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = const gemmi::Atom&; Extra = {}]’, 2023-09-13T09:58:47,354 inlined from ‘pybind11::iterator pybind11::make_iterator(Type&, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Type = const std::vector; Extra = {}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2457:74, 2023-09-13T09:58:47,354 inlined from ‘add_mol(pybind11::module&)::’ at python/mol.cpp:383:43, 2023-09-13T09:58:47,355 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = add_mol(pybind11::module&)::&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {const gemmi::Residue&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:58:47,355 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = add_mol(pybind11::module&)::&; Args = {const gemmi::Residue&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:58:47,356 inlined from ‘pybind11::cpp_function::initialize, pybind11::iterator, const gemmi::Residue&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&&, pybind11::iterator (*)(const gemmi::Residue&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-13T09:58:47,356 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::iterator, const gemmi::Residue&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&&, pybind11::iterator (*)(const gemmi::Residue&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:47,357 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:47,358 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-13T09:58:47,358 | ^ 2023-09-13T09:58:47,659 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-13T09:58:47,659 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-13T09:58:47,660 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::NcsOp; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:58:47,660 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::NcsOp; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:58:47,661 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::NcsOp, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::NcsOp (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17: 2023-09-13T09:58:47,662 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:47,662 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:58:47,663 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:47,663 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-13T09:58:47,664 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-13T09:58:47,665 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::NcsOp; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:58:47,665 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::NcsOp; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:58:47,666 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::NcsOp, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::NcsOp (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40: 2023-09-13T09:58:47,667 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:47,668 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:58:47,668 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:47,849 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-13T09:58:47,850 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-13T09:58:47,851 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Connection; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:58:47,851 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Connection; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:58:47,852 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Connection, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Connection (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17: 2023-09-13T09:58:47,853 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:47,853 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:58:47,854 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:47,854 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-13T09:58:47,855 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-13T09:58:47,856 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Connection; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T09:58:47,856 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Connection; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T09:58:47,857 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Connection, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Connection (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40: 2023-09-13T09:58:47,857 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:47,858 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:58:47,859 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:49,287 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-13T09:58:49,288 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-13T09:58:49,288 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:49,289 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:49,289 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:58:49,290 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:49,291 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:49,291 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:58:49,292 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:49,292 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-13T09:58:49,293 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-13T09:58:49,293 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:49,294 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:49,294 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:58:49,295 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:49,296 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:49,296 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:58:49,297 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:49,430 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-13T09:58:49,431 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-13T09:58:49,432 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:49,432 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:49,433 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:58:49,433 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:49,434 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:49,434 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:58:49,435 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:49,436 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-13T09:58:49,436 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-13T09:58:49,437 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:49,437 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:49,438 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:58:49,438 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:49,439 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:49,440 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:58:49,440 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:49,516 In file included from python/mol.cpp:11: 2023-09-13T09:58:49,517 In lambda function, 2023-09-13T09:58:49,517 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Connection&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:49,518 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Connection&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:49,518 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:58:49,519 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:49,520 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-13T09:58:49,520 203 | v.insert(v.begin() + i, x); 2023-09-13T09:58:49,521 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:49,521 In lambda function, 2023-09-13T09:58:49,522 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Connection&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:49,523 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Connection&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:49,523 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:58:49,524 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:49,525 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-13T09:58:49,525 203 | v.insert(v.begin() + i, x); 2023-09-13T09:58:49,526 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:49,618 In lambda function, 2023-09-13T09:58:49,619 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:49,620 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:49,620 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:58:49,621 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:49,621 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-13T09:58:49,622 203 | v.insert(v.begin() + i, x); 2023-09-13T09:58:49,623 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:49,623 In lambda function, 2023-09-13T09:58:49,624 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:49,624 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:49,625 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:58:49,626 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:49,626 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-13T09:58:49,627 203 | v.insert(v.begin() + i, x); 2023-09-13T09:58:49,627 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:50,984 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-13T09:58:50,985 inlined from ‘add_mol(pybind11::module&)::’ at python/mol.cpp:399:28, 2023-09-13T09:58:50,985 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = add_mol(pybind11::module&)::&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:50,986 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = add_mol(pybind11::module&)::&; Args = {gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:50,987 inlined from ‘pybind11::cpp_function::initialize, void, gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg>(add_mol(pybind11::module&)::&&, void (*)(gemmi::Residue&, const std::__cxx11::basic_string&, char), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T09:58:50,987 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, void, gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg>(add_mol(pybind11::module&)::&&, void (*)(gemmi::Residue&, const std::__cxx11::basic_string&, char), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:50,988 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:50,989 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:58:50,990 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:50,990 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-13T09:58:50,991 inlined from ‘add_mol(pybind11::module&)::’ at python/mol.cpp:399:28, 2023-09-13T09:58:50,991 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = add_mol(pybind11::module&)::&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T09:58:50,992 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = add_mol(pybind11::module&)::&; Args = {gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T09:58:50,992 inlined from ‘pybind11::cpp_function::initialize, void, gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg>(add_mol(pybind11::module&)::&&, void (*)(gemmi::Residue&, const std::__cxx11::basic_string&, char), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T09:58:50,993 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, void, gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg>(add_mol(pybind11::module&)::&&, void (*)(gemmi::Residue&, const std::__cxx11::basic_string&, char), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T09:58:50,994 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:50,995 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T09:58:50,995 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:53,649 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’: 2023-09-13T09:58:53,650 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:53,650 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-13T09:58:53,651 | ^~~~~~~~~~~~~~~~ 2023-09-13T09:58:53,651 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:53,838 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’: 2023-09-13T09:58:53,838 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:53,839 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:53,842 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; bool _TrivialValueTypes = false]’, 2023-09-13T09:58:53,843 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:58:53,844 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; _Tp = gemmi::TlsGroup]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:58:53,845 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:58:53,845 inlined from ‘gemmi::RefinementInfo::RefinementInfo(const gemmi::RefinementInfo&)’ at include/gemmi/metadata.hpp:117:8, 2023-09-13T09:58:53,846 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::RefinementInfo; _Args = {const gemmi::RefinementInfo&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-13T09:58:53,847 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21: 2023-09-13T09:58:53,848 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:53,848 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:58:53,848 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:54,071 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’: 2023-09-13T09:58:54,072 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:54,073 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-13T09:58:54,073 | ^~~~~~~~~~~~~~~~ 2023-09-13T09:58:54,074 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:54,202 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; bool _TrivialValueTypes = false]’, 2023-09-13T09:58:54,203 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:58:54,203 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; _Tp = gemmi::ExperimentInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:58:54,204 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:58:54,204 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-13T09:58:54,205 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:54,205 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:58:54,206 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:54,206 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’, 2023-09-13T09:58:54,207 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:58:54,208 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; _Tp = gemmi::CrystalInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:58:54,208 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:58:54,209 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-13T09:58:54,209 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:54,210 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:58:54,210 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:54,211 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; bool _TrivialValueTypes = false]’, 2023-09-13T09:58:54,211 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:58:54,212 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; _Tp = gemmi::RefinementInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:58:54,213 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:58:54,213 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-13T09:58:54,214 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:54,214 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:58:54,215 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:54,321 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’: 2023-09-13T09:58:54,321 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:54,322 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-13T09:58:54,323 | ^~~~~~~~~~~~~~~~ 2023-09-13T09:58:54,324 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:54,404 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; bool _TrivialValueTypes = false]’, 2023-09-13T09:58:54,405 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:58:54,406 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:58:54,406 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-13T09:58:54,407 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-13T09:58:54,407 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:54,408 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:58:54,408 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:54,491 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; bool _TrivialValueTypes = false]’, 2023-09-13T09:58:54,492 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:58:54,492 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:58:54,493 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:58:54,494 inlined from ‘gemmi::Assembly::Gen::Gen(const gemmi::Assembly::Gen&)’ at include/gemmi/metadata.hpp:320:10, 2023-09-13T09:58:54,495 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::Assembly::Gen; _Args = {const gemmi::Assembly::Gen&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-13T09:58:54,495 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Gen*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21: 2023-09-13T09:58:54,496 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:54,496 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:58:54,496 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:54,633 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; bool _TrivialValueTypes = false]’, 2023-09-13T09:58:54,634 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:58:54,634 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:58:54,635 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:58:54,636 inlined from ‘gemmi::Assembly::Gen::Gen(const gemmi::Assembly::Gen&)’ at include/gemmi/metadata.hpp:320:10, 2023-09-13T09:58:54,636 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::Assembly::Gen; _Args = {gemmi::Assembly::Gen&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-13T09:58:54,637 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21, 2023-09-13T09:58:54,637 inlined from ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*; bool _TrivialValueTypes = false]’ at /usr/include/c++/12/bits/stl_uninitialized.h:137:32, 2023-09-13T09:58:54,638 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:58:54,639 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*; _Tp = gemmi::Assembly::Gen]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:58:54,640 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Gen; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:251:35: 2023-09-13T09:58:54,640 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:54,641 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:58:54,641 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:54,771 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’: 2023-09-13T09:58:54,772 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:54,773 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-13T09:58:54,773 | ^~~~~~~~~~~~~~~~ 2023-09-13T09:58:54,774 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:54,993 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’, 2023-09-13T09:58:54,993 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:58:54,994 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; _Tp = gemmi::Assembly]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:58:54,995 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-13T09:58:54,995 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-13T09:58:54,996 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:54,997 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:58:54,997 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:55,309 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’, 2023-09-13T09:58:55,310 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:58:55,310 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; _Tp = gemmi::Assembly]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:58:55,311 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:58:55,311 inlined from ‘gemmi::Structure::Structure(const gemmi::Structure&)’ at include/gemmi/model.hpp:814:8: 2023-09-13T09:58:55,312 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:55,312 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:58:55,313 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:55,537 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’, 2023-09-13T09:58:55,540 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T09:58:55,540 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; _Tp = gemmi::Assembly]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T09:58:55,541 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T09:58:55,541 inlined from ‘pybind11::detail::type_caster_base >::make_copy_constructor >(const std::vector*)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/type_caster_base.h:1152:55, 2023-09-13T09:58:55,542 inlined from ‘static void* pybind11::detail::type_caster_base >::make_copy_constructor >(const std::vector*)::::_FUN(const void*)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/type_caster_base.h:1152:16: 2023-09-13T09:58:55,543 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:58:55,543 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T09:58:55,544 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:58:57,058 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/monlib.cpp -o build/temp.linux-armv7l-cpython-311/python/monlib.o -DVERSION_INFO=\"0.4.4\" -std=c++14 -fvisibility=hidden -g0 2023-09-13T09:59:54,172 In file included from /usr/include/c++/12/string:50, 2023-09-13T09:59:54,173 from include/gemmi/chemcomp.hpp:9, 2023-09-13T09:59:54,174 from python/monlib.cpp:3: 2023-09-13T09:59:54,174 /usr/include/c++/12/bits/stl_algobase.h: In function ‘_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’: 2023-09-13T09:59:54,175 /usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:59:54,175 2059 | __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last, 2023-09-13T09:59:54,176 | ^~~~~~~~~ 2023-09-13T09:59:54,177 /usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:59:55,905 In file included from /usr/include/c++/12/vector:70, 2023-09-13T09:59:55,906 from include/gemmi/chemcomp.hpp:10: 2023-09-13T09:59:55,906 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator, iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-13T09:59:55,907 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:59:55,908 189 | vector<_Tp, _Alloc>:: 2023-09-13T09:59:55,908 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:59:55,909 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:59:56,390 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator, iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-13T09:59:56,390 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:59:56,391 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:59:56,758 /usr/include/c++/12/bits/stl_algobase.h: In function ‘_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >(const std::__cxx11::basic_string&, const std::__cxx11::basic_string&):: >]’: 2023-09-13T09:59:56,759 /usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:59:56,760 2059 | __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last, 2023-09-13T09:59:56,760 | ^~~~~~~~~ 2023-09-13T09:59:56,761 /usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:59:57,268 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator, iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-13T09:59:57,269 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:59:57,270 189 | vector<_Tp, _Alloc>:: 2023-09-13T09:59:57,270 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T09:59:57,271 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T09:59:57,413 In file included from /usr/include/c++/12/vector:64: 2023-09-13T09:59:57,414 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-13T09:59:57,414 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Restraints::Torsion; F = ChemMod::apply_to(gemmi::ChemComp&) const::]’ at include/gemmi/util.hpp:232:10: 2023-09-13T09:59:57,415 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:59:57,416 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-13T09:59:57,417 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:59:58,757 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-13T09:59:58,757 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Restraints::Bond; F = ChemComp::remove_nonmatching_restraints()::]’ at include/gemmi/util.hpp:232:10, 2023-09-13T09:59:58,758 inlined from ‘void gemmi::ChemComp::remove_nonmatching_restraints()’ at include/gemmi/chemcomp.hpp:335:21, 2023-09-13T09:59:58,759 inlined from ‘gemmi::ChemComp& gemmi::ChemComp::remove_hydrogens()’ at include/gemmi/chemcomp.hpp:366:34: 2023-09-13T09:59:58,759 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:59:58,760 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-13T09:59:58,761 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:59:58,762 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-13T09:59:58,762 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Restraints::Angle; F = ChemComp::remove_nonmatching_restraints()::]’ at include/gemmi/util.hpp:232:10, 2023-09-13T09:59:58,763 inlined from ‘void gemmi::ChemComp::remove_nonmatching_restraints()’ at include/gemmi/chemcomp.hpp:339:21, 2023-09-13T09:59:58,764 inlined from ‘gemmi::ChemComp& gemmi::ChemComp::remove_hydrogens()’ at include/gemmi/chemcomp.hpp:366:34: 2023-09-13T09:59:58,764 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:59:58,765 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-13T09:59:58,765 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T09:59:58,766 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-13T09:59:58,766 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Restraints::Torsion; F = ChemComp::remove_nonmatching_restraints()::]’ at include/gemmi/util.hpp:232:10, 2023-09-13T09:59:58,767 inlined from ‘void gemmi::ChemComp::remove_nonmatching_restraints()’ at include/gemmi/chemcomp.hpp:344:21, 2023-09-13T09:59:58,768 inlined from ‘gemmi::ChemComp& gemmi::ChemComp::remove_hydrogens()’ at include/gemmi/chemcomp.hpp:366:34: 2023-09-13T09:59:58,768 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T09:59:58,769 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-13T09:59:58,770 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:02,401 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-13T10:00:02,402 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:00:02,403 175 | vector<_Tp, _Alloc>:: 2023-09-13T10:00:02,403 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:04,959 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’: 2023-09-13T10:00:04,959 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:00:04,960 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:00:04,961 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:05,017 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’: 2023-09-13T10:00:05,017 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:05,018 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:00:05,019 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:05,229 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-13T10:00:05,230 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:00:05,230 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:00:05,231 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:05,305 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-13T10:00:05,305 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:05,306 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:00:05,306 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:05,399 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Angle}; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-13T10:00:05,400 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:00:05,400 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:00:05,401 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:05,487 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Angle}; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-13T10:00:05,487 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:05,488 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:00:05,488 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:05,630 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Torsion}; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-13T10:00:05,630 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:00:05,631 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:00:05,631 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:05,756 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Torsion}; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-13T10:00:05,757 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:05,757 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:00:05,758 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:06,403 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Angle&}; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-13T10:00:06,404 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:00:06,404 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:00:06,405 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:06,610 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Torsion&}; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-13T10:00:06,610 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:00:13,107 In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’, 2023-09-13T10:00:13,107 inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::Restraints::get_plane(const std::string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:3877:28, 2023-09-13T10:00:13,108 inlined from ‘std::vector::iterator gemmi::Restraints::get_plane(const std::string&)’ at include/gemmi/chemcomp.hpp:270:24, 2023-09-13T10:00:13,109 inlined from ‘gemmi::Restraints::Plane& gemmi::Restraints::get_or_add_plane(const std::string&)’ at include/gemmi/chemcomp.hpp:275:48, 2023-09-13T10:00:13,109 inlined from ‘gemmi::ChemComp gemmi::make_chemcomp_from_block(const cif::Block&)’ at include/gemmi/chemcomp.hpp:488:54: 2023-09-13T10:00:13,110 /usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:13,111 2112 | return __find_if(__first, __last, __pred, 2023-09-13T10:00:13,111 | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:13,112 2113 | std::__iterator_category(__first)); 2023-09-13T10:00:13,112 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:14,181 In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’, 2023-09-13T10:00:14,181 inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::Restraints::get_plane(const std::string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:3877:28, 2023-09-13T10:00:14,182 inlined from ‘std::vector::iterator gemmi::Restraints::get_plane(const std::string&)’ at include/gemmi/chemcomp.hpp:270:24, 2023-09-13T10:00:14,183 inlined from ‘gemmi::Restraints::Plane& gemmi::Restraints::get_or_add_plane(const std::string&)’ at include/gemmi/chemcomp.hpp:275:48, 2023-09-13T10:00:14,184 inlined from ‘gemmi::Restraints gemmi::read_link_restraints(const cif::Block&)’ at include/gemmi/monlib.hpp:205:51: 2023-09-13T10:00:14,184 /usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:14,185 2112 | return __find_if(__first, __last, __pred, 2023-09-13T10:00:14,186 | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:14,186 2113 | std::__iterator_category(__first)); 2023-09-13T10:00:14,187 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:14,796 In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’, 2023-09-13T10:00:14,797 inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::Restraints::get_plane(const std::string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:3877:28, 2023-09-13T10:00:14,797 inlined from ‘std::vector::iterator gemmi::Restraints::get_plane(const std::string&)’ at include/gemmi/chemcomp.hpp:270:24, 2023-09-13T10:00:14,798 inlined from ‘gemmi::Restraints::Plane& gemmi::Restraints::get_or_add_plane(const std::string&)’ at include/gemmi/chemcomp.hpp:275:48, 2023-09-13T10:00:14,798 inlined from ‘gemmi::Restraints gemmi::read_restraint_modifications(const cif::Block&)’ at include/gemmi/monlib.hpp:314:51: 2023-09-13T10:00:14,799 /usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:14,799 2112 | return __find_if(__first, __last, __pred, 2023-09-13T10:00:14,800 | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:14,801 2113 | std::__iterator_category(__first)); 2023-09-13T10:00:14,802 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:15,797 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Bond&}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-13T10:00:15,798 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:00:15,799 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:00:15,800 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:15,926 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-13T10:00:15,927 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-13T10:00:15,928 133 | vector<_Tp, _Alloc>:: 2023-09-13T10:00:15,928 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:15,930 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:15,931 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-13T10:00:15,932 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:16,275 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-13T10:00:16,276 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:00:16,277 739 | vector<_Tp, _Alloc>:: 2023-09-13T10:00:16,277 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:16,278 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:16,278 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:17,327 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-13T10:00:17,328 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Restraints::Bond; F = ChemMod::apply_to(gemmi::ChemComp&) const::]’ at include/gemmi/util.hpp:232:10, 2023-09-13T10:00:17,329 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:378:27: 2023-09-13T10:00:17,329 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:17,330 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-13T10:00:17,330 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:17,333 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-13T10:00:17,333 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Restraints::Angle; F = ChemMod::apply_to(gemmi::ChemComp&) const::]’ at include/gemmi/util.hpp:232:10, 2023-09-13T10:00:17,334 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:381:27: 2023-09-13T10:00:17,335 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:17,336 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-13T10:00:17,336 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:17,337 In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >(const std::__cxx11::basic_string&, const std::__cxx11::basic_string&):: >]’, 2023-09-13T10:00:17,338 inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::Restraints::find_bond >(const std::__cxx11::basic_string&, const std::__cxx11::basic_string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:3877:28, 2023-09-13T10:00:17,339 inlined from ‘std::vector::iterator gemmi::Restraints::find_bond(const T&, const T&) [with T = std::__cxx11::basic_string]’ at include/gemmi/chemcomp.hpp:136:24, 2023-09-13T10:00:17,340 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:417:36: 2023-09-13T10:00:17,340 /usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:17,341 2112 | return __find_if(__first, __last, __pred, 2023-09-13T10:00:17,341 | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:17,342 2113 | std::__iterator_category(__first)); 2023-09-13T10:00:17,342 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:17,343 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-13T10:00:17,343 inlined from ‘T& gemmi::impl::add_or_set(std::vector&, typename std::vector::iterator, const T&) [with T = gemmi::Restraints::Bond]’ at include/gemmi/monlib.hpp:354:20, 2023-09-13T10:00:17,344 inlined from ‘T& gemmi::impl::add_or_set(std::vector&, typename std::vector::iterator, const T&) [with T = gemmi::Restraints::Bond]’ at include/gemmi/monlib.hpp:351:4, 2023-09-13T10:00:17,345 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:420:25: 2023-09-13T10:00:17,345 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:17,346 1287 | _M_realloc_insert(end(), __x); 2023-09-13T10:00:17,346 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T10:00:17,347 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-13T10:00:17,348 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:424:34: 2023-09-13T10:00:17,349 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:17,349 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T10:00:17,350 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:17,351 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-13T10:00:17,352 inlined from ‘T& gemmi::impl::add_or_set(std::vector&, typename std::vector::iterator, const T&) [with T = gemmi::Restraints::Angle]’ at include/gemmi/monlib.hpp:354:20, 2023-09-13T10:00:17,352 inlined from ‘T& gemmi::impl::add_or_set(std::vector&, typename std::vector::iterator, const T&) [with T = gemmi::Restraints::Angle]’ at include/gemmi/monlib.hpp:351:4, 2023-09-13T10:00:17,353 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:444:25: 2023-09-13T10:00:17,354 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:17,354 1287 | _M_realloc_insert(end(), __x); 2023-09-13T10:00:17,355 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T10:00:17,359 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-13T10:00:17,360 inlined from ‘T& gemmi::impl::add_or_set(std::vector&, typename std::vector::iterator, const T&) [with T = gemmi::Restraints::Torsion]’ at include/gemmi/monlib.hpp:354:20, 2023-09-13T10:00:17,360 inlined from ‘T& gemmi::impl::add_or_set(std::vector&, typename std::vector::iterator, const T&) [with T = gemmi::Restraints::Torsion]’ at include/gemmi/monlib.hpp:351:4, 2023-09-13T10:00:17,361 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:467:25: 2023-09-13T10:00:17,361 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:17,362 1287 | _M_realloc_insert(end(), __x); 2023-09-13T10:00:17,362 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T10:00:17,365 In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’, 2023-09-13T10:00:17,366 inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::Restraints::get_plane(const std::string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:3877:28, 2023-09-13T10:00:17,367 inlined from ‘std::vector::iterator gemmi::Restraints::get_plane(const std::string&)’ at include/gemmi/chemcomp.hpp:270:24, 2023-09-13T10:00:17,367 inlined from ‘gemmi::Restraints::Plane& gemmi::Restraints::get_or_add_plane(const std::string&)’ at include/gemmi/chemcomp.hpp:275:48, 2023-09-13T10:00:17,368 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:511:64: 2023-09-13T10:00:17,369 /usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:17,370 2112 | return __find_if(__first, __last, __pred, 2023-09-13T10:00:17,370 | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:17,371 2113 | std::__iterator_category(__first)); 2023-09-13T10:00:17,372 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:17,372 In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’, 2023-09-13T10:00:17,373 inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::Restraints::get_plane(const std::string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:3877:28, 2023-09-13T10:00:17,374 inlined from ‘std::vector::iterator gemmi::Restraints::get_plane(const std::string&)’ at include/gemmi/chemcomp.hpp:270:24, 2023-09-13T10:00:17,375 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:518:40: 2023-09-13T10:00:17,375 /usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:17,376 2112 | return __find_if(__first, __last, __pred, 2023-09-13T10:00:17,377 | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:17,377 2113 | std::__iterator_category(__first)); 2023-09-13T10:00:17,378 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:38,820 In file included from python/common.h:3, 2023-09-13T10:00:38,820 from python/monlib.cpp:9: 2023-09-13T10:00:38,821 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Restraints::Bond&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Bond&; Extra = {}]’: 2023-09-13T10:00:38,821 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:38,822 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-13T10:00:38,823 | ^~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:38,823 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:39,393 In file included from /usr/include/c++/12/vector:63: 2023-09-13T10:00:39,394 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’: 2023-09-13T10:00:39,395 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:39,397 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-13T10:00:39,398 | ^~~~~~~~~~~~~~~~ 2023-09-13T10:00:39,399 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:39,510 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; bool _TrivialValueTypes = false]’, 2023-09-13T10:00:39,511 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T10:00:39,511 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; _Tp = gemmi::Restraints::Angle]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T10:00:39,512 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-13T10:00:39,513 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-13T10:00:39,513 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:39,514 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T10:00:39,514 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:39,617 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’: 2023-09-13T10:00:39,618 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:39,619 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-13T10:00:39,619 | ^~~~~~~~~~~~~~~~ 2023-09-13T10:00:39,620 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:39,771 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; bool _TrivialValueTypes = false]’, 2023-09-13T10:00:39,772 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T10:00:39,773 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; _Tp = gemmi::Restraints::Torsion]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T10:00:39,773 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-13T10:00:39,774 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-13T10:00:39,775 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:39,776 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T10:00:39,776 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:43,110 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-13T10:00:43,505 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-13T10:00:43,676 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:00:43,676 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:00:43,677 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T10:00:43,678 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:00:43,679 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:43,875 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T10:00:43,890 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:43,956 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-13T10:00:43,960 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-13T10:00:43,961 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:00:44,039 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:00:44,042 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T10:00:44,215 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:00:44,240 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:44,366 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T10:00:44,367 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:44,367 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-13T10:00:44,387 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-13T10:00:44,530 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:00:44,530 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-13T10:00:44,531 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T10:00:44,533 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:00:44,534 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:44,535 1287 | _M_realloc_insert(end(), __x); 2023-09-13T10:00:44,536 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T10:00:44,536 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-13T10:00:44,537 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-13T10:00:44,538 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:00:44,539 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-13T10:00:44,539 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T10:00:44,540 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:00:44,541 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:44,542 1287 | _M_realloc_insert(end(), __x); 2023-09-13T10:00:44,543 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T10:00:44,544 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-13T10:00:44,545 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-13T10:00:44,546 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-13T10:00:44,553 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:00:44,554 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:00:44,555 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T10:00:44,556 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:00:44,614 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:00:44,617 1779 | _M_range_insert(__pos, __first, __last, 2023-09-13T10:00:44,618 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:44,618 1780 | std::__iterator_category(__first)); 2023-09-13T10:00:44,619 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:44,620 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:44,620 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-13T10:00:44,621 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-13T10:00:44,622 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-13T10:00:44,623 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:00:44,626 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:00:44,634 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T10:00:44,650 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:00:44,651 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:00:44,652 1779 | _M_range_insert(__pos, __first, __last, 2023-09-13T10:00:44,694 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:44,783 1780 | std::__iterator_category(__first)); 2023-09-13T10:00:44,787 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:44,795 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:44,857 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-13T10:00:44,937 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-13T10:00:44,942 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:00:45,103 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:00:45,104 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T10:00:45,147 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:00:45,248 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:45,306 1287 | _M_realloc_insert(end(), __x); 2023-09-13T10:00:45,327 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T10:00:45,358 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-13T10:00:45,369 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-13T10:00:45,442 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:00:45,623 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:00:45,623 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T10:00:45,624 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:00:45,626 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:45,627 1287 | _M_realloc_insert(end(), __x); 2023-09-13T10:00:45,628 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T10:00:46,355 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-13T10:00:46,356 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-13T10:00:46,357 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::iterable&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:177:32: 2023-09-13T10:00:46,357 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:46,358 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:00:46,359 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:46,360 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-13T10:00:46,360 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::iterable&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:180:24: 2023-09-13T10:00:46,361 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:46,361 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-13T10:00:46,362 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:48,054 In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >(const std::__cxx11::basic_string&, const std::__cxx11::basic_string&):: >]’, 2023-09-13T10:00:48,055 inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::Restraints::find_bond >(const std::__cxx11::basic_string&, const std::__cxx11::basic_string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:3877:28, 2023-09-13T10:00:48,056 inlined from ‘std::vector::iterator gemmi::Restraints::find_bond(const T&, const T&) [with T = std::__cxx11::basic_string]’ at include/gemmi/chemcomp.hpp:136:24, 2023-09-13T10:00:48,056 inlined from ‘add_monlib(pybind11::module&)::’ at python/monlib.cpp:95:37, 2023-09-13T10:00:48,057 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Bond&; Func = add_monlib(pybind11::module&)::&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:00:48,058 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Bond&; Guard = pybind11::detail::void_type; Func = add_monlib(pybind11::module&)::&; Args = {gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-13T10:00:48,059 inlined from ‘pybind11::cpp_function::initialize, gemmi::Restraints::Bond&, gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::return_value_policy>(add_monlib(pybind11::module&)::&&, gemmi::Restraints::Bond& (*)(gemmi::Restraints&, const std::__cxx11::basic_string&, const std::__cxx11::basic_string&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::return_value_policy&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T10:00:48,059 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, gemmi::Restraints::Bond&, gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::return_value_policy>(add_monlib(pybind11::module&)::&&, gemmi::Restraints::Bond& (*)(gemmi::Restraints&, const std::__cxx11::basic_string&, const std::__cxx11::basic_string&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::return_value_policy&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:00:48,060 /usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:48,060 2112 | return __find_if(__first, __last, __pred, 2023-09-13T10:00:48,061 | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:48,062 2113 | std::__iterator_category(__first)); 2023-09-13T10:00:48,062 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:48,063 In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >(const std::__cxx11::basic_string&, const std::__cxx11::basic_string&):: >]’, 2023-09-13T10:00:48,064 inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::Restraints::find_bond >(const std::__cxx11::basic_string&, const std::__cxx11::basic_string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:3877:28, 2023-09-13T10:00:48,065 inlined from ‘std::vector::iterator gemmi::Restraints::find_bond(const T&, const T&) [with T = std::__cxx11::basic_string]’ at include/gemmi/chemcomp.hpp:136:24, 2023-09-13T10:00:48,065 inlined from ‘add_monlib(pybind11::module&)::’ at python/monlib.cpp:95:37, 2023-09-13T10:00:48,066 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Bond&; Func = add_monlib(pybind11::module&)::&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:00:48,067 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Bond&; Guard = pybind11::detail::void_type; Func = add_monlib(pybind11::module&)::&; Args = {gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-13T10:00:48,067 inlined from ‘pybind11::cpp_function::initialize, gemmi::Restraints::Bond&, gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::return_value_policy>(add_monlib(pybind11::module&)::&&, gemmi::Restraints::Bond& (*)(gemmi::Restraints&, const std::__cxx11::basic_string&, const std::__cxx11::basic_string&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::return_value_policy&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T10:00:48,068 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, gemmi::Restraints::Bond&, gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::return_value_policy>(add_monlib(pybind11::module&)::&&, gemmi::Restraints::Bond& (*)(gemmi::Restraints&, const std::__cxx11::basic_string&, const std::__cxx11::basic_string&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::return_value_policy&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:00:48,069 /usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:48,070 2112 | return __find_if(__first, __last, __pred, 2023-09-13T10:00:48,070 | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:48,071 2113 | std::__iterator_category(__first)); 2023-09-13T10:00:48,071 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:50,105 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Bond&; Extra = {}]’, 2023-09-13T10:00:50,105 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-13T10:00:50,106 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T10:00:50,106 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T10:00:50,107 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-13T10:00:50,108 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:00:50,109 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:50,110 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-13T10:00:50,110 | ^ 2023-09-13T10:00:50,111 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Bond&; Extra = {}]’, 2023-09-13T10:00:50,111 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-13T10:00:50,112 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T10:00:50,113 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T10:00:50,113 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-13T10:00:50,114 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:00:50,115 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:50,118 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-13T10:00:50,119 | ^ 2023-09-13T10:00:52,272 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-13T10:00:52,272 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-13T10:00:52,273 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Bond; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T10:00:52,274 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Bond; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T10:00:52,274 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Bond, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Bond (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-13T10:00:52,275 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Bond, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Bond (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:00:52,276 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:52,277 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T10:00:52,277 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:52,278 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-13T10:00:52,278 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-13T10:00:52,279 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Bond; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T10:00:52,279 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Bond; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T10:00:52,280 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Bond, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Bond (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-13T10:00:52,281 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Bond, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Bond (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:00:52,282 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:52,282 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T10:00:52,284 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:53,002 In file included from python/monlib.cpp:11: 2023-09-13T10:00:53,003 In lambda function, 2023-09-13T10:00:53,004 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:00:53,004 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:00:53,005 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T10:00:53,005 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:00:53,007 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-13T10:00:53,007 203 | v.insert(v.begin() + i, x); 2023-09-13T10:00:53,008 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:53,008 In lambda function, 2023-09-13T10:00:53,009 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:00:53,010 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:00:53,011 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T10:00:53,011 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:00:53,012 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-13T10:00:53,014 203 | v.insert(v.begin() + i, x); 2023-09-13T10:00:53,014 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:53,315 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-13T10:00:53,315 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-13T10:00:53,316 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:00:53,317 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:00:53,318 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T10:00:53,319 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:00:53,319 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:53,320 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T10:00:53,321 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:53,322 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-13T10:00:53,323 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-13T10:00:53,323 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:00:53,324 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:00:53,325 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T10:00:53,326 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:00:53,327 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:53,328 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T10:00:53,328 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:54,535 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’: 2023-09-13T10:00:54,536 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:54,537 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-13T10:00:54,538 | ^~~~~~~~~~~~~~~~ 2023-09-13T10:00:54,538 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:54,596 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; bool _TrivialValueTypes = false]’, 2023-09-13T10:00:54,597 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T10:00:54,598 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; _Tp = gemmi::Restraints::Angle]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T10:00:54,598 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T10:00:54,599 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-13T10:00:54,600 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:54,601 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T10:00:54,601 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:54,602 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; bool _TrivialValueTypes = false]’, 2023-09-13T10:00:54,602 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T10:00:54,603 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; _Tp = gemmi::Restraints::Torsion]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T10:00:54,603 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T10:00:54,604 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-13T10:00:54,604 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:54,605 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T10:00:54,606 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:54,607 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; bool _TrivialValueTypes = false]’, 2023-09-13T10:00:54,607 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T10:00:54,608 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; _Tp = gemmi::Restraints::Plane]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T10:00:54,609 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T10:00:54,609 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-13T10:00:54,610 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:54,611 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T10:00:54,611 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:57,300 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; bool _TrivialValueTypes = false]’, 2023-09-13T10:00:57,301 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T10:00:57,302 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; _Tp = gemmi::Restraints::Plane]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T10:00:57,302 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-13T10:00:57,303 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-13T10:00:57,304 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:57,304 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T10:00:57,305 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:00:57,818 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-13T10:00:57,819 inlined from ‘void gemmi::Topo::initialize_refmac_topology(const gemmi::Structure&, gemmi::Model&, gemmi::MonLib&)’ at include/gemmi/topo.hpp:448:28: 2023-09-13T10:00:57,820 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:00:57,820 1287 | _M_realloc_insert(end(), __x); 2023-09-13T10:00:57,821 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T10:01:00,903 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/mtz.cpp -o build/temp.linux-armv7l-cpython-311/python/mtz.o -DVERSION_INFO=\"0.4.4\" -std=c++14 -fvisibility=hidden -g0 2023-09-13T10:01:52,758 In file included from /usr/include/c++/12/vector:70, 2023-09-13T10:01:52,758 from include/gemmi/mtz.hpp:16, 2023-09-13T10:01:52,759 from python/mtz.cpp:3: 2023-09-13T10:01:52,760 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Mat33&, gemmi::Vec3&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-13T10:01:52,760 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:01:52,761 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:01:52,761 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:01:52,866 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mat33&, gemmi::Vec3&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-13T10:01:52,866 inlined from ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const SG*) [with SG = gemmi::SpaceGroup]’ at include/gemmi/unitcell.hpp:249:26: 2023-09-13T10:01:52,867 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:01:52,867 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:01:52,868 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:04,645 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Mtz::Dataset&}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-13T10:02:04,646 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:02:04,646 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:02:04,647 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:04,842 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-13T10:02:04,843 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-13T10:02:04,843 133 | vector<_Tp, _Alloc>:: 2023-09-13T10:02:04,844 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:04,847 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:04,847 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-13T10:02:04,848 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:05,225 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-13T10:02:05,226 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:02:05,226 739 | vector<_Tp, _Alloc>:: 2023-09-13T10:02:05,227 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:05,228 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:05,228 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:05,420 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-13T10:02:05,421 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:02:05,421 175 | vector<_Tp, _Alloc>:: 2023-09-13T10:02:05,422 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:06,535 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-13T10:02:06,535 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:02:06,536 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:02:06,536 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:06,641 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-13T10:02:06,642 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:06,642 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:02:06,643 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:13,793 In file included from python/common.h:3, 2023-09-13T10:02:13,794 from python/mtz.cpp:8: 2023-09-13T10:02:13,795 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Mtz::Dataset&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Mtz::Dataset&; Extra = {}]’: 2023-09-13T10:02:13,795 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:13,796 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-13T10:02:13,797 | ^~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:13,797 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:18,147 In file included from /usr/include/c++/12/vector:64: 2023-09-13T10:02:18,148 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-13T10:02:18,148 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-13T10:02:18,149 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:02:18,149 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:02:18,150 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T10:02:18,151 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:02:18,151 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:18,152 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T10:02:18,153 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:18,153 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-13T10:02:18,154 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-13T10:02:18,155 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:02:18,156 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:02:18,156 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T10:02:18,157 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:02:18,158 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:18,158 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T10:02:18,159 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:18,426 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-13T10:02:18,427 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-13T10:02:18,428 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:02:18,428 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-13T10:02:18,430 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T10:02:18,430 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:02:18,431 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:18,432 1287 | _M_realloc_insert(end(), __x); 2023-09-13T10:02:18,433 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T10:02:18,433 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-13T10:02:18,434 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-13T10:02:18,435 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:02:18,436 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-13T10:02:18,437 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T10:02:18,437 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:02:18,438 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:18,439 1287 | _M_realloc_insert(end(), __x); 2023-09-13T10:02:18,440 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T10:02:18,533 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-13T10:02:18,533 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-13T10:02:18,534 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Mtz::Dataset; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T10:02:18,535 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Mtz::Dataset; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T10:02:18,536 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Mtz::Dataset, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Mtz::Dataset (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17: 2023-09-13T10:02:18,536 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:18,537 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T10:02:18,538 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:18,538 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-13T10:02:18,539 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-13T10:02:18,540 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Mtz::Dataset; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T10:02:18,541 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Mtz::Dataset; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T10:02:18,541 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Mtz::Dataset, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Mtz::Dataset (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40: 2023-09-13T10:02:18,542 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:18,543 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T10:02:18,543 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:18,686 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-13T10:02:18,686 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-13T10:02:18,687 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-13T10:02:18,687 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:02:18,688 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:02:18,689 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T10:02:18,690 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:02:18,690 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:02:18,691 1779 | _M_range_insert(__pos, __first, __last, 2023-09-13T10:02:18,692 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:18,692 1780 | std::__iterator_category(__first)); 2023-09-13T10:02:18,693 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:18,693 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:18,694 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-13T10:02:18,695 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-13T10:02:18,695 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-13T10:02:18,696 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:02:18,697 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:02:18,698 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T10:02:18,698 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:02:18,699 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:02:18,700 1779 | _M_range_insert(__pos, __first, __last, 2023-09-13T10:02:18,700 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:18,701 1780 | std::__iterator_category(__first)); 2023-09-13T10:02:18,702 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:18,703 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:18,726 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-13T10:02:18,727 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-13T10:02:18,728 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:02:18,729 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:02:18,730 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T10:02:18,730 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:02:18,731 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:18,732 1287 | _M_realloc_insert(end(), __x); 2023-09-13T10:02:18,732 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T10:02:18,733 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-13T10:02:18,734 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-13T10:02:18,735 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:02:18,735 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:02:18,736 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T10:02:18,737 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:02:18,738 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:18,739 1287 | _M_realloc_insert(end(), __x); 2023-09-13T10:02:18,739 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T10:02:23,120 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Mtz::Dataset&; Extra = {}]’, 2023-09-13T10:02:23,121 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-13T10:02:23,122 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T10:02:23,123 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T10:02:23,124 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-13T10:02:23,125 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:02:23,126 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:23,126 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-13T10:02:23,127 | ^ 2023-09-13T10:02:23,128 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Mtz::Dataset&; Extra = {}]’, 2023-09-13T10:02:23,128 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-13T10:02:23,129 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-13T10:02:23,129 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-13T10:02:23,130 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-13T10:02:23,131 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:02:23,132 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:23,133 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-13T10:02:23,134 | ^ 2023-09-13T10:02:23,774 In file included from python/mtz.cpp:10: 2023-09-13T10:02:23,774 In lambda function, 2023-09-13T10:02:23,775 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:02:23,776 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:02:23,776 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T10:02:23,777 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:02:23,778 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-13T10:02:23,779 203 | v.insert(v.begin() + i, x); 2023-09-13T10:02:23,780 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:23,781 In lambda function, 2023-09-13T10:02:23,781 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:02:23,782 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:02:23,783 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T10:02:23,784 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:02:23,785 /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-13T10:02:23,786 203 | v.insert(v.begin() + i, x); 2023-09-13T10:02:23,787 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:23,993 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-13T10:02:23,993 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-13T10:02:23,994 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:02:23,995 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:02:23,995 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-13T10:02:23,996 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:02:23,997 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:23,998 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T10:02:23,998 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:23,999 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-13T10:02:24,000 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-13T10:02:24,000 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-13T10:02:24,001 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-13T10:02:24,002 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-13T10:02:24,003 inlined from ‘static pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-13T10:02:24,004 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:02:24,004 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-13T10:02:24,006 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:02:35,653 In file included from include/gemmi/fourier.hpp:24, 2023-09-13T10:02:35,653 from python/mtz.cpp:4: 2023-09-13T10:02:35,654 In member function ‘pocketfft::detail::cmplx*)this)->pocketfft::detail::cmplx::r * other))> pocketfft::detail::cmplx::operator*(const T2&) const [with T2 = float; T = float]’, 2023-09-13T10:02:35,654 inlined from ‘void pocketfft::detail::fftblue::fft(pocketfft::detail::cmplx*, T0) const [with bool fwd = true; T = float; T0 = float]’ at include/gemmi/third_party/pocketfft_hdronly.h:2258:25: 2023-09-13T10:02:35,655 include/gemmi/third_party/pocketfft_hdronly.h:234:15: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::r’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-13T10:02:35,656 234 | { return {r*other, i*other}; } 2023-09-13T10:02:35,656 | ^ 2023-09-13T10:02:35,657 include/gemmi/third_party/pocketfft_hdronly.h:234:24: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::i’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-13T10:02:35,657 234 | { return {r*other, i*other}; } 2023-09-13T10:02:35,658 | ^ 2023-09-13T10:02:35,735 In member function ‘pocketfft::detail::cmplx*)this)->pocketfft::detail::cmplx::r * other))> pocketfft::detail::cmplx::operator*(const T2&) const [with T2 = float; T = float]’, 2023-09-13T10:02:35,736 inlined from ‘void pocketfft::detail::fftblue::fft(pocketfft::detail::cmplx*, T0) const [with bool fwd = false; T = float; T0 = float]’ at include/gemmi/third_party/pocketfft_hdronly.h:2258:25: 2023-09-13T10:02:35,736 include/gemmi/third_party/pocketfft_hdronly.h:234:15: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::r’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-13T10:02:35,737 234 | { return {r*other, i*other}; } 2023-09-13T10:02:35,738 | ^ 2023-09-13T10:02:35,739 include/gemmi/third_party/pocketfft_hdronly.h:234:24: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::i’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-13T10:02:35,739 234 | { return {r*other, i*other}; } 2023-09-13T10:02:35,740 | ^ 2023-09-13T10:02:38,590 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/read.cpp -o build/temp.linux-armv7l-cpython-311/python/read.o -DVERSION_INFO=\"0.4.4\" -std=c++14 -fvisibility=hidden -g0 2023-09-13T10:03:19,221 In file included from /usr/include/c++/12/vector:70, 2023-09-13T10:03:19,222 from include/gemmi/third_party/tao/pegtl/internal/../analysis/rule_info.hpp:8, 2023-09-13T10:03:19,222 from include/gemmi/third_party/tao/pegtl/internal/../analysis/grammar_info.hpp:14, 2023-09-13T10:03:19,223 from include/gemmi/third_party/tao/pegtl/internal/../analysis/generic.hpp:9, 2023-09-13T10:03:19,224 from include/gemmi/third_party/tao/pegtl/internal/eol.hpp:11, 2023-09-13T10:03:19,224 from include/gemmi/third_party/tao/pegtl/eol.hpp:9, 2023-09-13T10:03:19,225 from include/gemmi/third_party/tao/pegtl/ascii.hpp:8, 2023-09-13T10:03:19,226 from include/gemmi/third_party/tao/pegtl.hpp:10, 2023-09-13T10:03:19,227 from include/gemmi/numb.hpp:13, 2023-09-13T10:03:19,227 from python/read.cpp:3: 2023-09-13T10:03:19,228 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::FTransform&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-13T10:03:19,228 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:19,229 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:03:19,230 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:19,276 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Transform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-13T10:03:19,276 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:20,455 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-13T10:03:20,455 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:20,517 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-13T10:03:20,518 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:20,518 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:03:20,519 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:20,695 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’: 2023-09-13T10:03:20,696 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:20,697 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:03:20,697 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:20,768 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’: 2023-09-13T10:03:20,769 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:20,770 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:03:20,771 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:20,863 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’: 2023-09-13T10:03:20,863 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:20,864 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:03:20,865 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:20,939 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’: 2023-09-13T10:03:20,939 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:20,940 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:03:20,940 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:21,183 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator]’: 2023-09-13T10:03:21,184 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:21,184 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:03:21,185 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:21,399 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator]’: 2023-09-13T10:03:21,400 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:21,400 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:03:21,401 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:21,962 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Atom&}; _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-13T10:03:21,963 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:21,963 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:03:21,964 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:22,045 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Atom&}; _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-13T10:03:22,046 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:22,046 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:03:22,047 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:22,399 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::SmallStructure::AtomType&}; _Tp = gemmi::SmallStructure::AtomType; _Alloc = std::allocator]’: 2023-09-13T10:03:22,400 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:22,400 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:03:22,401 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:22,498 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’: 2023-09-13T10:03:22,499 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:22,561 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’: 2023-09-13T10:03:22,562 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:22,562 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:03:22,563 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:22,716 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::BasicRefinementInfo; _Alloc = std::allocator]’: 2023-09-13T10:03:22,716 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:22,717 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:03:22,717 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:22,775 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::ReflectionsInfo; _Alloc = std::allocator]’: 2023-09-13T10:03:22,776 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:22,956 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::ReflectionsInfo; _Alloc = std::allocator]’, 2023-09-13T10:03:22,957 inlined from ‘void gemmi::pdb_impl::read_remark_200_230_240(const char*, gemmi::Metadata&, std::string*&)’ at include/gemmi/remarks.hpp:452:52: 2023-09-13T10:03:22,958 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:22,959 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:03:22,960 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:24,470 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Mat33&, gemmi::Vec3&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-13T10:03:24,471 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:24,472 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:03:24,472 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:24,575 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mat33&, gemmi::Vec3&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-13T10:03:24,575 inlined from ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const SG*) [with SG = gemmi::SpaceGroup]’ at include/gemmi/unitcell.hpp:249:26: 2023-09-13T10:03:24,576 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:24,577 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:03:24,577 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:24,703 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::FTransform&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-13T10:03:24,704 inlined from ‘void gemmi::Structure::setup_cell_images()’ at include/gemmi/model.hpp:995:31: 2023-09-13T10:03:24,705 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:24,706 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:03:24,706 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:24,707 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Transform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-13T10:03:24,707 inlined from ‘void gemmi::Structure::setup_cell_images()’ at include/gemmi/model.hpp:997:33: 2023-09-13T10:03:24,708 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:24,708 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:03:24,709 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:25,038 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-13T10:03:25,038 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:25,039 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:03:25,040 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:25,225 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-13T10:03:25,225 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:25,226 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:03:25,227 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:25,681 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >}; _Tp = gemmi::Assembly; _Alloc = std::allocator]’: 2023-09-13T10:03:25,682 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:25,683 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:03:25,684 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:25,763 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >}; _Tp = gemmi::Assembly; _Alloc = std::allocator]’: 2023-09-13T10:03:25,764 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:25,764 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:03:25,765 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:25,928 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::NcsOp}; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’: 2023-09-13T10:03:25,929 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:25,930 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:03:25,930 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:25,971 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::NcsOp}; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’: 2023-09-13T10:03:25,971 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:25,972 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:03:25,972 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:29,229 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-13T10:03:29,230 inlined from ‘void gemmi::impl::read_connectivity(gemmi::cif::Block&, gemmi::Structure&)’ at include/gemmi/mmcif.hpp:240:32: 2023-09-13T10:03:29,230 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:29,231 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:03:29,232 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:34,149 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Assembly::Operator&}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-13T10:03:34,150 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:34,150 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:03:34,151 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:34,461 In file included from /usr/include/c++/12/vector:64: 2023-09-13T10:03:34,462 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-13T10:03:34,462 inlined from ‘std::vector gemmi::impl::read_assemblies(gemmi::cif::Block&)’ at include/gemmi/mmcif.hpp:335:36: 2023-09-13T10:03:34,463 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:34,464 1287 | _M_realloc_insert(end(), __x); 2023-09-13T10:03:34,465 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T10:03:35,079 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’: 2023-09-13T10:03:35,079 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:35,080 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:03:35,081 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:35,214 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’: 2023-09-13T10:03:35,215 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:35,216 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:03:35,216 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:40,872 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::SmallStructure::Site&}; _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator]’: 2023-09-13T10:03:40,873 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:40,874 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:03:40,874 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:41,258 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator]’, 2023-09-13T10:03:41,259 inlined from ‘gemmi::SmallStructure gemmi::make_small_structure_from_block(const cif::Block&)’ at include/gemmi/smcif.hpp:74:23: 2023-09-13T10:03:41,260 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:41,260 1287 | _M_realloc_insert(end(), __x); 2023-09-13T10:03:41,261 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T10:03:41,263 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::SmallStructure::AtomType; _Alloc = std::allocator]’, 2023-09-13T10:03:41,264 inlined from ‘gemmi::SmallStructure gemmi::make_small_structure_from_block(const cif::Block&)’ at include/gemmi/smcif.hpp:106:28: 2023-09-13T10:03:41,264 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:41,265 1287 | _M_realloc_insert(end(), __x); 2023-09-13T10:03:41,266 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T10:03:47,497 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const char*&}; _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’: 2023-09-13T10:03:47,498 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:47,499 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:03:47,500 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:47,587 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const char*&}; _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’, 2023-09-13T10:03:47,588 inlined from ‘void gemmi::pdb_impl::add_restraint_count_weight(gemmi::RefinementInfo&, const char*, const char*)’ at include/gemmi/remarks.hpp:94:36: 2023-09-13T10:03:47,588 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:47,589 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:03:47,590 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:47,673 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const std::__cxx11::basic_string, std::allocator >&}; _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’: 2023-09-13T10:03:47,673 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:03:47,674 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:03:47,675 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:47,774 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const std::__cxx11::basic_string, std::allocator >&}; _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’, 2023-09-13T10:03:47,774 inlined from ‘T& gemmi::impl::find_or_add(std::vector&, const std::string&) [with T = gemmi::RefinementInfo::Restr]’ at include/gemmi/model.hpp:42:19, 2023-09-13T10:03:47,775 inlined from ‘T& gemmi::impl::find_or_add(std::vector&, const std::string&) [with T = gemmi::RefinementInfo::Restr]’ at include/gemmi/model.hpp:39:4: 2023-09-13T10:03:47,775 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:47,776 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:03:47,776 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:47,976 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::BasicRefinementInfo; _Alloc = std::allocator]’, 2023-09-13T10:03:47,977 inlined from ‘void gemmi::pdb_impl::read_remark3_line(const char*, gemmi::Metadata&, std::string*&)’ at include/gemmi/remarks.hpp:317:49: 2023-09-13T10:03:47,977 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:47,978 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:03:47,979 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:49,046 In file included from /usr/include/c++/12/memory:66, 2023-09-13T10:03:49,046 from include/gemmi/third_party/tao/pegtl/internal/../analysis/../internal/demangle_cxxabi.hpp:9, 2023-09-13T10:03:49,047 from include/gemmi/third_party/tao/pegtl/internal/../analysis/../internal/demangle.hpp:13, 2023-09-13T10:03:49,048 from include/gemmi/third_party/tao/pegtl/internal/../analysis/grammar_info.hpp:12: 2023-09-13T10:03:49,049 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’: 2023-09-13T10:03:49,049 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:49,050 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-13T10:03:49,050 | ^~~~~~~~~~~~~~~~ 2023-09-13T10:03:49,051 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:53,548 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’: 2023-09-13T10:03:53,549 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:53,549 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:53,642 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’: 2023-09-13T10:03:53,643 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:53,644 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:53,791 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’: 2023-09-13T10:03:53,792 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:53,793 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:53,794 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; bool _TrivialValueTypes = false]’, 2023-09-13T10:03:53,795 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T10:03:53,795 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; _Tp = gemmi::TlsGroup]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T10:03:53,796 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T10:03:53,797 inlined from ‘gemmi::RefinementInfo::RefinementInfo(const gemmi::RefinementInfo&)’ at include/gemmi/metadata.hpp:117:8, 2023-09-13T10:03:53,798 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::RefinementInfo; _Args = {const gemmi::RefinementInfo&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-13T10:03:53,798 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21: 2023-09-13T10:03:53,799 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:53,800 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T10:03:53,800 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:53,992 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’: 2023-09-13T10:03:53,993 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:53,993 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-13T10:03:53,994 | ^~~~~~~~~~~~~~~~ 2023-09-13T10:03:53,995 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:54,120 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; bool _TrivialValueTypes = false]’, 2023-09-13T10:03:54,120 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T10:03:54,121 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; _Tp = gemmi::ExperimentInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T10:03:54,122 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T10:03:54,123 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-13T10:03:54,123 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:54,124 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T10:03:54,125 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:54,125 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’, 2023-09-13T10:03:54,126 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T10:03:54,127 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; _Tp = gemmi::CrystalInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T10:03:54,128 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T10:03:54,128 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-13T10:03:54,129 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:54,129 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T10:03:54,130 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:54,130 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; bool _TrivialValueTypes = false]’, 2023-09-13T10:03:54,131 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T10:03:54,131 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; _Tp = gemmi::RefinementInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T10:03:54,132 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T10:03:54,133 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-13T10:03:54,134 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:54,134 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T10:03:54,135 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:03:54,362 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’, 2023-09-13T10:03:54,363 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T10:03:54,364 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; _Tp = gemmi::Assembly]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T10:03:54,365 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T10:03:54,365 inlined from ‘gemmi::Structure::Structure(const gemmi::Structure&)’ at include/gemmi/model.hpp:814:8: 2023-09-13T10:03:54,366 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:03:54,366 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T10:03:54,367 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:04:00,790 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/recgrid.cpp -o build/temp.linux-armv7l-cpython-311/python/recgrid.o -DVERSION_INFO=\"0.4.4\" -std=c++14 -fvisibility=hidden -g0 2023-09-13T10:04:52,183 In file included from /usr/include/c++/12/vector:70, 2023-09-13T10:04:52,184 from include/gemmi/unitcell.hpp:9, 2023-09-13T10:04:52,184 from include/gemmi/asudata.hpp:11, 2023-09-13T10:04:52,185 from include/gemmi/recgrid.hpp:8, 2023-09-13T10:04:52,186 from python/recgrid.cpp:3: 2023-09-13T10:04:52,187 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Mat33&, gemmi::Vec3&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-13T10:04:52,187 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:04:52,188 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:04:52,189 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:04:52,287 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mat33&, gemmi::Vec3&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-13T10:04:52,288 inlined from ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const SG*) [with SG = gemmi::SpaceGroup]’ at include/gemmi/unitcell.hpp:249:26: 2023-09-13T10:04:52,289 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:04:52,290 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:04:52,290 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:05:11,615 In file included from include/gemmi/fourier.hpp:24, 2023-09-13T10:05:11,615 from python/recgrid.cpp:4: 2023-09-13T10:05:11,616 In member function ‘pocketfft::detail::cmplx*)this)->pocketfft::detail::cmplx::r * other))> pocketfft::detail::cmplx::operator*(const T2&) const [with T2 = float; T = float]’, 2023-09-13T10:05:11,616 inlined from ‘void pocketfft::detail::fftblue::fft(pocketfft::detail::cmplx*, T0) const [with bool fwd = true; T = float; T0 = float]’ at include/gemmi/third_party/pocketfft_hdronly.h:2258:25: 2023-09-13T10:05:11,617 include/gemmi/third_party/pocketfft_hdronly.h:234:15: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::r’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-13T10:05:11,618 234 | { return {r*other, i*other}; } 2023-09-13T10:05:11,618 | ^ 2023-09-13T10:05:11,619 include/gemmi/third_party/pocketfft_hdronly.h:234:24: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::i’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-13T10:05:11,619 234 | { return {r*other, i*other}; } 2023-09-13T10:05:11,620 | ^ 2023-09-13T10:05:11,697 In member function ‘pocketfft::detail::cmplx*)this)->pocketfft::detail::cmplx::r * other))> pocketfft::detail::cmplx::operator*(const T2&) const [with T2 = float; T = float]’, 2023-09-13T10:05:11,697 inlined from ‘void pocketfft::detail::fftblue::fft(pocketfft::detail::cmplx*, T0) const [with bool fwd = false; T = float; T0 = float]’ at include/gemmi/third_party/pocketfft_hdronly.h:2258:25: 2023-09-13T10:05:11,698 include/gemmi/third_party/pocketfft_hdronly.h:234:15: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::r’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-13T10:05:11,698 234 | { return {r*other, i*other}; } 2023-09-13T10:05:11,699 | ^ 2023-09-13T10:05:11,700 include/gemmi/third_party/pocketfft_hdronly.h:234:24: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::i’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-13T10:05:11,700 234 | { return {r*other, i*other}; } 2023-09-13T10:05:11,701 | ^ 2023-09-13T10:05:14,195 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/search.cpp -o build/temp.linux-armv7l-cpython-311/python/search.o -DVERSION_INFO=\"0.4.4\" -std=c++14 -fvisibility=hidden -g0 2023-09-13T10:05:51,284 In file included from /usr/include/c++/12/vector:70, 2023-09-13T10:05:51,284 from include/gemmi/neighbor.hpp:9, 2023-09-13T10:05:51,285 from python/search.cpp:3: 2023-09-13T10:05:51,285 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Fractional&}; _Tp = gemmi::Fractional; _Alloc = std::allocator]’: 2023-09-13T10:05:51,286 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:05:51,287 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:05:51,287 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:05:51,400 In file included from /usr/include/c++/12/vector:64: 2023-09-13T10:05:51,401 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Fractional; _Alloc = std::allocator]’, 2023-09-13T10:05:51,402 inlined from ‘void gemmi::NeighborSearch::add_site(const gemmi::SmallStructure::Site&, int)’ at include/gemmi/neighbor.hpp:240:21: 2023-09-13T10:05:51,403 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:05:51,404 1287 | _M_realloc_insert(end(), __x); 2023-09-13T10:05:51,406 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-13T10:06:15,756 In file included from /usr/include/c++/12/vector:63: 2023-09-13T10:06:15,757 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’: 2023-09-13T10:06:15,757 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:06:15,758 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-13T10:06:15,758 | ^~~~~~~~~~~~~~~~ 2023-09-13T10:06:15,759 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:06:15,847 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’: 2023-09-13T10:06:15,847 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:06:15,848 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:06:16,027 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’: 2023-09-13T10:06:16,027 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:06:16,028 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:06:16,151 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; bool _TrivialValueTypes = false]’, 2023-09-13T10:06:16,152 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T10:06:16,152 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; _Tp = gemmi::Restraints::Angle]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T10:06:16,153 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T10:06:16,154 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-13T10:06:16,155 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:06:16,155 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T10:06:16,156 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:06:16,156 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; bool _TrivialValueTypes = false]’, 2023-09-13T10:06:16,157 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T10:06:16,157 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; _Tp = gemmi::Restraints::Torsion]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T10:06:16,158 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T10:06:16,158 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-13T10:06:16,159 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:06:16,160 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T10:06:16,160 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:06:16,161 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; bool _TrivialValueTypes = false]’, 2023-09-13T10:06:16,162 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-13T10:06:16,162 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; _Tp = gemmi::Restraints::Plane]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-13T10:06:16,163 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-13T10:06:16,164 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-13T10:06:16,164 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:06:16,165 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-13T10:06:16,165 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:06:16,945 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/sf.cpp -o build/temp.linux-armv7l-cpython-311/python/sf.o -DVERSION_INFO=\"0.4.4\" -std=c++14 -fvisibility=hidden -g0 2023-09-13T10:06:52,606 In file included from /usr/include/c++/12/algorithm:61, 2023-09-13T10:06:52,607 from /usr/include/c++/12/valarray:38, 2023-09-13T10:06:52,607 from /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl.h:22, 2023-09-13T10:06:52,608 from python/sf.cpp:4: 2023-09-13T10:06:52,609 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2023-09-13T10:06:52,609 inlined from ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1844:5, 2023-09-13T10:06:52,610 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2023-09-13T10:06:52,611 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1932:5, 2023-09-13T10:06:52,611 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = gemmi::impl_fprim::Point*]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2023-09-13T10:06:52,612 inlined from ‘void gemmi::impl_fprim::cromer(int, double, int, const OrbitalCoef*, double*, double*)’ at include/gemmi/fprime.hpp:161:14: 2023-09-13T10:06:52,612 /usr/include/c++/12/bits/stl_algo.h:1849:32: warning: array subscript 16 is outside array bounds of ‘gemmi::impl_fprim::Point [11]’ [-Warray-bounds] 2023-09-13T10:06:52,613 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2023-09-13T10:06:52,614 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:06:52,615 In file included from python/sf.cpp:10: 2023-09-13T10:06:52,615 include/gemmi/fprime.hpp: In function ‘void gemmi::impl_fprim::cromer(int, double, int, const OrbitalCoef*, double*, double*)’: 2023-09-13T10:06:52,616 include/gemmi/fprime.hpp:153:11: note: at offset 256 into object ‘lndata’ of size 176 2023-09-13T10:06:52,617 153 | Point lndata[11]; 2023-09-13T10:06:52,617 | ^~~~~~ 2023-09-13T10:06:52,955 In file included from /usr/include/c++/12/vector:70, 2023-09-13T10:06:52,956 from /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/common.h:314, 2023-09-13T10:06:52,956 from /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../attr.h:13, 2023-09-13T10:06:52,957 from /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/class.h:12, 2023-09-13T10:06:52,958 from /tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:13, 2023-09-13T10:06:52,958 from python/common.h:3, 2023-09-13T10:06:52,958 from python/sf.cpp:3: 2023-09-13T10:06:52,959 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: 2023-09-13T10:06:52,959 /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-13T10:06:52,960 523 | vector<_Tp, _Alloc>:: 2023-09-13T10:06:52,960 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:06:53,228 In file included from /usr/include/c++/12/vector:64: 2023-09-13T10:06:53,228 In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-13T10:06:53,229 inlined from ‘void gemmi::StructureFactorCalculator::set_stol2_and_scattering_factors(const gemmi::Miller&) [with Table = gemmi::C4322]’ at include/gemmi/sfcalc.hpp:34:31, 2023-09-13T10:06:53,230 inlined from ‘std::complex gemmi::StructureFactorCalculator
::calculate_sf_from_model(const gemmi::Model&, const gemmi::Miller&) [with Table = gemmi::C4322]’ at include/gemmi/sfcalc.hpp:91:37: 2023-09-13T10:06:53,230 /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:06:53,231 1032 | _M_fill_insert(end(), __new_size - size(), __x); 2023-09-13T10:06:53,232 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:06:53,465 In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-13T10:06:53,466 inlined from ‘void gemmi::StructureFactorCalculator
::set_stol2_and_scattering_factors(const gemmi::Miller&) [with Table = gemmi::IT92]’ at include/gemmi/sfcalc.hpp:34:31, 2023-09-13T10:06:53,466 inlined from ‘std::complex gemmi::StructureFactorCalculator
::calculate_sf_from_model(const gemmi::Model&, const gemmi::Miller&) [with Table = gemmi::IT92]’ at include/gemmi/sfcalc.hpp:91:37: 2023-09-13T10:06:53,467 /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:06:53,468 1032 | _M_fill_insert(end(), __new_size - size(), __x); 2023-09-13T10:06:53,468 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:06:57,707 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/sym.cpp -o build/temp.linux-armv7l-cpython-311/python/sym.o -DVERSION_INFO=\"0.4.4\" -std=c++14 -fvisibility=hidden -g0 2023-09-13T10:07:50,563 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/unitcell.cpp -o build/temp.linux-armv7l-cpython-311/python/unitcell.o -DVERSION_INFO=\"0.4.4\" -std=c++14 -fvisibility=hidden -g0 2023-09-13T10:08:33,185 In file included from /usr/include/c++/12/vector:70, 2023-09-13T10:08:33,186 from include/gemmi/unitcell.hpp:9, 2023-09-13T10:08:33,186 from python/unitcell.cpp:3: 2023-09-13T10:08:33,187 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2023-09-13T10:08:33,187 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2023-09-13T10:08:33,188 439 | vector<_Tp, _Alloc>:: 2023-09-13T10:08:33,188 | ^~~~~~~~~~~~~~~~~~~ 2023-09-13T10:08:33,235 In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, 2023-09-13T10:08:33,236 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-13T10:08:33,237 inlined from ‘add_smat33(pybind11::module&, const char*)::)>’ at python/unitcell.cpp:59:23: 2023-09-13T10:08:33,237 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2023-09-13T10:08:33,238 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-13T10:08:33,239 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:08:46,444 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/tmp/pip-wheel-8_x4cybp/gemmi_886dbbe442bb4a3cb76d30451492e8a3/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/write.cpp -o build/temp.linux-armv7l-cpython-311/python/write.o -DVERSION_INFO=\"0.4.4\" -std=c++14 -fvisibility=hidden -g0 2023-09-13T10:09:11,649 In file included from /usr/include/c++/12/string:50, 2023-09-13T10:09:11,650 from include/gemmi/sprintf.hpp:19, 2023-09-13T10:09:11,651 from python/write.cpp:4: 2023-09-13T10:09:11,651 /usr/include/c++/12/bits/stl_algobase.h: In function ‘_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’: 2023-09-13T10:09:11,652 /usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:09:11,653 2059 | __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last, 2023-09-13T10:09:11,653 | ^~~~~~~~~ 2023-09-13T10:09:11,654 /usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:09:43,540 In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’, 2023-09-13T10:09:43,540 inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::update_mmcif_block(const Structure&, cif::Block&, MmcifOutputGroups)::]’ at /usr/include/c++/12/bits/stl_algo.h:3877:28, 2023-09-13T10:09:43,544 inlined from ‘bool std::none_of(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::update_mmcif_block(const Structure&, cif::Block&, MmcifOutputGroups)::]’ at /usr/include/c++/12/bits/stl_algo.h:474:47, 2023-09-13T10:09:43,545 inlined from ‘bool std::any_of(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::update_mmcif_block(const Structure&, cif::Block&, MmcifOutputGroups)::]’ at /usr/include/c++/12/bits/stl_algo.h:493:27, 2023-09-13T10:09:43,545 inlined from ‘void gemmi::update_mmcif_block(const Structure&, cif::Block&, MmcifOutputGroups)’ at include/gemmi/to_mmcif.hpp:564:20: 2023-09-13T10:09:43,546 /usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-13T10:09:43,547 2112 | return __find_if(__first, __last, __pred, 2023-09-13T10:09:43,547 | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:09:43,548 2113 | std::__iterator_category(__first)); 2023-09-13T10:09:43,549 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-13T10:09:55,101 arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/python/align.o build/temp.linux-armv7l-cpython-311/python/ccp4.o build/temp.linux-armv7l-cpython-311/python/cif.o build/temp.linux-armv7l-cpython-311/python/elem.o build/temp.linux-armv7l-cpython-311/python/gemmi.o build/temp.linux-armv7l-cpython-311/python/grid.o build/temp.linux-armv7l-cpython-311/python/hkl.o build/temp.linux-armv7l-cpython-311/python/meta.o build/temp.linux-armv7l-cpython-311/python/mol.o build/temp.linux-armv7l-cpython-311/python/monlib.o build/temp.linux-armv7l-cpython-311/python/mtz.o build/temp.linux-armv7l-cpython-311/python/read.o build/temp.linux-armv7l-cpython-311/python/recgrid.o build/temp.linux-armv7l-cpython-311/python/search.o build/temp.linux-armv7l-cpython-311/python/sf.o build/temp.linux-armv7l-cpython-311/python/sym.o build/temp.linux-armv7l-cpython-311/python/unitcell.o build/temp.linux-armv7l-cpython-311/python/write.o -L/usr/lib/arm-linux-gnueabihf -Lbuild/temp.linux-armv7l-cpython-311 -lgemmi_zlib -lgemmi_zlib -o build/lib.linux-armv7l-cpython-311/gemmi.cpython-311-arm-linux-gnueabihf.so -Wl,-s 2023-09-13T10:09:56,854 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-09-13T10:09:56,854 !! 2023-09-13T10:09:56,856 ******************************************************************************** 2023-09-13T10:09:56,856 Please avoid running ``setup.py`` directly. 2023-09-13T10:09:56,857 Instead, use pypa/build, pypa/installer or other 2023-09-13T10:09:56,857 standards-based tools. 2023-09-13T10:09:56,858 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-09-13T10:09:56,858 ******************************************************************************** 2023-09-13T10:09:56,859 !! 2023-09-13T10:09:56,860 self.initialize_options() 2023-09-13T10:09:56,883 installing to build/bdist.linux-armv7l/wheel 2023-09-13T10:09:56,884 running install 2023-09-13T10:09:56,908 running install_lib 2023-09-13T10:09:56,935 creating build/bdist.linux-armv7l 2023-09-13T10:09:56,936 creating build/bdist.linux-armv7l/wheel 2023-09-13T10:09:56,938 creating build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,939 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/ccd_subgraph.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,941 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/col_order.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,943 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/merge_mtz_mmcif.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,945 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/__main__.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,947 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/from_json.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,949 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/long_geom.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,951 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/hello.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,953 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/simple_search.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,955 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/rama_plot.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,957 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/rama_gather.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,959 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/__init__.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,961 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/mtz_i_sigi.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,963 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/aafreq.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,965 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/matthews.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,968 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/ccd_gi.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,970 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/maskdiff.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,972 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/mtrix_iso.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,974 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/monomers.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,976 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/sub_ccd.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,978 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/weight.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,980 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/map2mtz.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,982 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/patterson_slice.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,984 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/cif_i_sigi.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-13T10:09:56,986 copying build/lib.linux-armv7l-cpython-311/gemmi.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2023-09-13T10:09:57,064 running install_egg_info 2023-09-13T10:09:57,116 running egg_info 2023-09-13T10:09:57,141 writing gemmi.egg-info/PKG-INFO 2023-09-13T10:09:57,143 writing dependency_links to gemmi.egg-info/dependency_links.txt 2023-09-13T10:09:57,145 writing top-level names to gemmi.egg-info/top_level.txt 2023-09-13T10:09:57,180 reading manifest file 'gemmi.egg-info/SOURCES.txt' 2023-09-13T10:09:57,215 reading manifest template 'MANIFEST.in' 2023-09-13T10:09:57,298 adding license file 'LICENSE.txt' 2023-09-13T10:09:57,313 writing manifest file 'gemmi.egg-info/SOURCES.txt' 2023-09-13T10:09:57,315 Copying gemmi.egg-info to build/bdist.linux-armv7l/wheel/gemmi-0.4.4-py3.11.egg-info 2023-09-13T10:09:57,325 running install_scripts 2023-09-13T10:09:57,383 creating build/bdist.linux-armv7l/wheel/gemmi-0.4.4.dist-info/WHEEL 2023-09-13T10:09:57,386 creating '/tmp/pip-wheel-f04i3198/gemmi-0.4.4-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-13T10:09:58,307 adding 'gemmi.cpython-311-arm-linux-gnueabihf.so' 2023-09-13T10:09:58,349 adding 'gemmi-examples/__init__.py' 2023-09-13T10:09:58,350 adding 'gemmi-examples/__main__.py' 2023-09-13T10:09:58,352 adding 'gemmi-examples/aafreq.py' 2023-09-13T10:09:58,353 adding 'gemmi-examples/ccd_gi.py' 2023-09-13T10:09:58,354 adding 'gemmi-examples/ccd_subgraph.py' 2023-09-13T10:09:58,355 adding 'gemmi-examples/cif_i_sigi.py' 2023-09-13T10:09:58,357 adding 'gemmi-examples/col_order.py' 2023-09-13T10:09:58,358 adding 'gemmi-examples/from_json.py' 2023-09-13T10:09:58,359 adding 'gemmi-examples/hello.py' 2023-09-13T10:09:58,360 adding 'gemmi-examples/long_geom.py' 2023-09-13T10:09:58,362 adding 'gemmi-examples/map2mtz.py' 2023-09-13T10:09:58,363 adding 'gemmi-examples/maskdiff.py' 2023-09-13T10:09:58,364 adding 'gemmi-examples/matthews.py' 2023-09-13T10:09:58,366 adding 'gemmi-examples/merge_mtz_mmcif.py' 2023-09-13T10:09:58,367 adding 'gemmi-examples/monomers.py' 2023-09-13T10:09:58,368 adding 'gemmi-examples/mtrix_iso.py' 2023-09-13T10:09:58,370 adding 'gemmi-examples/mtz_i_sigi.py' 2023-09-13T10:09:58,371 adding 'gemmi-examples/patterson_slice.py' 2023-09-13T10:09:58,372 adding 'gemmi-examples/rama_gather.py' 2023-09-13T10:09:58,373 adding 'gemmi-examples/rama_plot.py' 2023-09-13T10:09:58,374 adding 'gemmi-examples/simple_search.py' 2023-09-13T10:09:58,376 adding 'gemmi-examples/sub_ccd.py' 2023-09-13T10:09:58,377 adding 'gemmi-examples/weight.py' 2023-09-13T10:09:58,380 adding 'gemmi-0.4.4.dist-info/LICENSE.txt' 2023-09-13T10:09:58,381 adding 'gemmi-0.4.4.dist-info/METADATA' 2023-09-13T10:09:58,382 adding 'gemmi-0.4.4.dist-info/WHEEL' 2023-09-13T10:09:58,383 adding 'gemmi-0.4.4.dist-info/top_level.txt' 2023-09-13T10:09:58,384 adding 'gemmi-0.4.4.dist-info/RECORD' 2023-09-13T10:09:58,415 removing build/bdist.linux-armv7l/wheel 2023-09-13T10:09:58,575 Building wheel for gemmi (setup.py): finished with status 'done' 2023-09-13T10:09:58,602 Created wheel for gemmi: filename=gemmi-0.4.4-cp311-cp311-linux_armv7l.whl size=1989366 sha256=805905c20ec5b2ca56f545a1903f22acdaa3af89d1796e20601359e74be563c8 2023-09-13T10:09:58,603 Stored in directory: /tmp/pip-ephem-wheel-cache-zifvroch/wheels/fc/26/8a/7aca6de1c76036b11e5324a777ff6a11efcbf0a4d9cf25a828 2023-09-13T10:09:58,614 Successfully built gemmi 2023-09-13T10:09:58,660 Removed build tracker: '/tmp/pip-build-tracker-fef0l594'