2023-09-13T12:12:19,645 Created temporary directory: /tmp/pip-build-tracker-8kpsv3y7
2023-09-13T12:12:19,646 Initialized build tracking at /tmp/pip-build-tracker-8kpsv3y7
2023-09-13T12:12:19,647 Created build tracker: /tmp/pip-build-tracker-8kpsv3y7
2023-09-13T12:12:19,647 Entered build tracker: /tmp/pip-build-tracker-8kpsv3y7
2023-09-13T12:12:19,648 Created temporary directory: /tmp/pip-wheel-s9lq12g9
2023-09-13T12:12:19,651 Created temporary directory: /tmp/pip-ephem-wheel-cache-o0ah8r5e
2023-09-13T12:12:19,673 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-13T12:12:19,677 2 location(s) to search for versions of python-javabridge:
2023-09-13T12:12:19,677 * https://pypi.org/simple/python-javabridge/
2023-09-13T12:12:19,677 * https://www.piwheels.org/simple/python-javabridge/
2023-09-13T12:12:19,677 Fetching project page and analyzing links: https://pypi.org/simple/python-javabridge/
2023-09-13T12:12:19,678 Getting page https://pypi.org/simple/python-javabridge/
2023-09-13T12:12:19,680 Found index url https://pypi.org/simple/
2023-09-13T12:12:19,817 Fetched page https://pypi.org/simple/python-javabridge/ as application/vnd.pypi.simple.v1+json
2023-09-13T12:12:19,819   Found link https://files.pythonhosted.org/packages/58/5c/bfcc52002c9dfe5fe3bd067783243ab0130f59f757b0517f62f1ba7e88ea/python-javabridge-4.0.0.tar.gz (from https://pypi.org/simple/python-javabridge/), version: 4.0.0
2023-09-13T12:12:19,820   Skipping link: No binaries permitted for python-javabridge: https://files.pythonhosted.org/packages/21/52/7d9737c905264061f45e81ce57f6532c9e46462f0093beed4d4d72928600/python_javabridge-4.0.0-cp38-cp38-macosx_10_15_x86_64.whl (from https://pypi.org/simple/python-javabridge/)
2023-09-13T12:12:19,821   Found link https://files.pythonhosted.org/packages/0e/52/b444f826f4148cc741755a6b6adbd1707c01864e45359b8fdf3f67c71ebc/python-javabridge-4.0.1.tar.gz (from https://pypi.org/simple/python-javabridge/), version: 4.0.1
2023-09-13T12:12:19,821   Found link https://files.pythonhosted.org/packages/8c/c1/e553ceb6e71e0112d125d5a451390dc7df42962c1f67147a4c1d5b1938f9/python-javabridge-4.0.2.tar.gz (from https://pypi.org/simple/python-javabridge/), version: 4.0.2
2023-09-13T12:12:19,822   Found link https://files.pythonhosted.org/packages/5e/d5/78f75ee0a6beb51a606c50cc17d8f99782653f04dce6d5e12feaef089692/python-javabridge-4.0.3.tar.gz (from https://pypi.org/simple/python-javabridge/), version: 4.0.3
2023-09-13T12:12:19,823 Fetching project page and analyzing links: https://www.piwheels.org/simple/python-javabridge/
2023-09-13T12:12:19,823 Getting page https://www.piwheels.org/simple/python-javabridge/
2023-09-13T12:12:19,825 Found index url https://www.piwheels.org/simple/
2023-09-13T12:12:20,099 Fetched page https://www.piwheels.org/simple/python-javabridge/ as text/html
2023-09-13T12:12:20,101 Skipping link: not a file: https://www.piwheels.org/simple/python-javabridge/
2023-09-13T12:12:20,101 Skipping link: not a file: https://pypi.org/simple/python-javabridge/
2023-09-13T12:12:20,120 Given no hashes to check 1 links for project 'python-javabridge': discarding no candidates
2023-09-13T12:12:20,138 Collecting python-javabridge==4.0.2
2023-09-13T12:12:20,141   Created temporary directory: /tmp/pip-unpack-h8ofnlxl
2023-09-13T12:12:20,360   Downloading python-javabridge-4.0.2.tar.gz (1.3 MB)
2023-09-13T12:12:20,787   Added python-javabridge==4.0.2 from https://files.pythonhosted.org/packages/8c/c1/e553ceb6e71e0112d125d5a451390dc7df42962c1f67147a4c1d5b1938f9/python-javabridge-4.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-8kpsv3y7'
2023-09-13T12:12:20,789   Running setup.py (path:/tmp/pip-wheel-s9lq12g9/python-javabridge_1a8d08e7d10f4088b8f7a2e0763e4ac6/setup.py) egg_info for package python-javabridge
2023-09-13T12:12:20,790   Created temporary directory: /tmp/pip-pip-egg-info-ugrcorci
2023-09-13T12:12:20,791   Preparing metadata (setup.py): started
2023-09-13T12:12:20,792   Running command python setup.py egg_info
2023-09-13T12:12:21,385   Traceback (most recent call last):
2023-09-13T12:12:21,385     File "<string>", line 2, in <module>
2023-09-13T12:12:21,386     File "<pip-setuptools-caller>", line 34, in <module>
2023-09-13T12:12:21,387     File "/tmp/pip-wheel-s9lq12g9/python-javabridge_1a8d08e7d10f4088b8f7a2e0763e4ac6/setup.py", line 412, in <module>
2023-09-13T12:12:21,387       ext_modules=ext_modules(),
2023-09-13T12:12:21,388                   ^^^^^^^^^^^^^
2023-09-13T12:12:21,388     File "/tmp/pip-wheel-s9lq12g9/python-javabridge_1a8d08e7d10f4088b8f7a2e0763e4ac6/setup.py", line 96, in ext_modules
2023-09-13T12:12:21,389       java_home = find_javahome()
2023-09-13T12:12:21,390                   ^^^^^^^^^^^^^^^
2023-09-13T12:12:21,391     File "/tmp/pip-wheel-s9lq12g9/python-javabridge_1a8d08e7d10f4088b8f7a2e0763e4ac6/javabridge/locate.py", line 132, in find_javahome
2023-09-13T12:12:21,391       java_bin = get_out(["bash", "-c", "type -p java"])
2023-09-13T12:12:21,392                  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-13T12:12:21,393     File "/tmp/pip-wheel-s9lq12g9/python-javabridge_1a8d08e7d10f4088b8f7a2e0763e4ac6/javabridge/locate.py", line 129, in get_out
2023-09-13T12:12:21,393       raise Exception("Error finding javahome on linux: %s" % cmd)
2023-09-13T12:12:21,394   Exception: Error finding javahome on linux: ['bash', '-c', 'type -p java']
2023-09-13T12:12:21,473   ERROR: [present-rich] python setup.py egg_info exited with 1
2023-09-13T12:12:21,486   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2023-09-13T12:12:21,486   exec(compile('"'"''"'"''"'"'
2023-09-13T12:12:21,486   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-13T12:12:21,486   #
2023-09-13T12:12:21,486   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-13T12:12:21,486   #   import from `distutils.core` to work with newer packaging standards.
2023-09-13T12:12:21,486   # - It provides a clear error message when setuptools is not installed.
2023-09-13T12:12:21,486   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-13T12:12:21,486   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-13T12:12:21,486   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-13T12:12:21,486   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-13T12:12:21,486   import os, sys, tokenize
2023-09-13T12:12:21,486   
2023-09-13T12:12:21,486   try:
2023-09-13T12:12:21,486       import setuptools
2023-09-13T12:12:21,486   except ImportError as error:
2023-09-13T12:12:21,486       print(
2023-09-13T12:12:21,486           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-13T12:12:21,486           "the build environment.",
2023-09-13T12:12:21,486           file=sys.stderr,
2023-09-13T12:12:21,486       )
2023-09-13T12:12:21,486       sys.exit(1)
2023-09-13T12:12:21,486   
2023-09-13T12:12:21,486   __file__ = %r
2023-09-13T12:12:21,486   sys.argv[0] = __file__
2023-09-13T12:12:21,486   
2023-09-13T12:12:21,486   if os.path.exists(__file__):
2023-09-13T12:12:21,486       filename = __file__
2023-09-13T12:12:21,486       with tokenize.open(__file__) as f:
2023-09-13T12:12:21,486           setup_py_code = f.read()
2023-09-13T12:12:21,486   else:
2023-09-13T12:12:21,486       filename = "<auto-generated setuptools caller>"
2023-09-13T12:12:21,486       setup_py_code = "from setuptools import setup; setup()"
2023-09-13T12:12:21,486   
2023-09-13T12:12:21,486   exec(compile(setup_py_code, filename, "exec"))
2023-09-13T12:12:21,486   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-s9lq12g9/python-javabridge_1a8d08e7d10f4088b8f7a2e0763e4ac6/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-ugrcorci[/]
2023-09-13T12:12:21,487   [bold magenta]cwd[/]: /tmp/pip-wheel-s9lq12g9/python-javabridge_1a8d08e7d10f4088b8f7a2e0763e4ac6/
2023-09-13T12:12:21,487   Preparing metadata (setup.py): finished with status 'error'
2023-09-13T12:12:21,489 ERROR: [present-rich] metadata generation failed
2023-09-13T12:12:21,494 Exception information:
2023-09-13T12:12:21,494 Traceback (most recent call last):
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2023-09-13T12:12:21,494     call_subprocess(
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2023-09-13T12:12:21,494     raise error
2023-09-13T12:12:21,494 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2023-09-13T12:12:21,494 
2023-09-13T12:12:21,494 The above exception was the direct cause of the following exception:
2023-09-13T12:12:21,494 
2023-09-13T12:12:21,494 Traceback (most recent call last):
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-13T12:12:21,494     status = run_func(*args)
2023-09-13T12:12:21,494              ^^^^^^^^^^^^^^^
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-13T12:12:21,494     return func(self, options, args)
2023-09-13T12:12:21,494            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2023-09-13T12:12:21,494     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2023-09-13T12:12:21,494                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve
2023-09-13T12:12:21,494     result = self._result = resolver.resolve(
2023-09-13T12:12:21,494                             ^^^^^^^^^^^^^^^^^
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2023-09-13T12:12:21,494     state = resolution.resolve(requirements, max_rounds=max_rounds)
2023-09-13T12:12:21,494             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2023-09-13T12:12:21,494     self._add_to_criteria(self.state.criteria, r, parent=None)
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2023-09-13T12:12:21,494     if not criterion.candidates:
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2023-09-13T12:12:21,494     return bool(self._sequence)
2023-09-13T12:12:21,494            ^^^^^^^^^^^^^^^^^^^^
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2023-09-13T12:12:21,494     return any(self)
2023-09-13T12:12:21,494            ^^^^^^^^^
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2023-09-13T12:12:21,494     return (c for c in iterator if id(c) not in self._incompatible_ids)
2023-09-13T12:12:21,494            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2023-09-13T12:12:21,494     candidate = func()
2023-09-13T12:12:21,494                 ^^^^^^
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link
2023-09-13T12:12:21,494     self._link_candidate_cache[link] = LinkCandidate(
2023-09-13T12:12:21,494                                        ^^^^^^^^^^^^^^
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__
2023-09-13T12:12:21,494     super().__init__(
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
2023-09-13T12:12:21,494     self.dist = self._prepare()
2023-09-13T12:12:21,494                 ^^^^^^^^^^^^^^^
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare
2023-09-13T12:12:21,494     dist = self._prepare_distribution()
2023-09-13T12:12:21,494            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution
2023-09-13T12:12:21,494     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2023-09-13T12:12:21,494            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement
2023-09-13T12:12:21,494     return self._prepare_linked_requirement(req, parallel_builds)
2023-09-13T12:12:21,494            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement
2023-09-13T12:12:21,494     dist = _get_prepared_distribution(
2023-09-13T12:12:21,494            ^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution
2023-09-13T12:12:21,494     abstract_dist.prepare_distribution_metadata(
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata
2023-09-13T12:12:21,494     self.req.prepare_metadata()
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata
2023-09-13T12:12:21,494     self.metadata_directory = generate_metadata_legacy(
2023-09-13T12:12:21,494                               ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-13T12:12:21,494   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2023-09-13T12:12:21,494     raise MetadataGenerationFailed(package_details=details) from error
2023-09-13T12:12:21,494 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2023-09-13T12:12:21,507 Removed python-javabridge==4.0.2 from https://files.pythonhosted.org/packages/8c/c1/e553ceb6e71e0112d125d5a451390dc7df42962c1f67147a4c1d5b1938f9/python-javabridge-4.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-8kpsv3y7'
2023-09-13T12:12:21,508 Removed build tracker: '/tmp/pip-build-tracker-8kpsv3y7'