2023-09-13T22:53:51,403 Created temporary directory: /tmp/pip-build-tracker-4xgm07a1 2023-09-13T22:53:51,404 Initialized build tracking at /tmp/pip-build-tracker-4xgm07a1 2023-09-13T22:53:51,405 Created build tracker: /tmp/pip-build-tracker-4xgm07a1 2023-09-13T22:53:51,405 Entered build tracker: /tmp/pip-build-tracker-4xgm07a1 2023-09-13T22:53:51,406 Created temporary directory: /tmp/pip-wheel-cfj4dud6 2023-09-13T22:53:51,409 Created temporary directory: /tmp/pip-ephem-wheel-cache-k268ndib 2023-09-13T22:53:51,431 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-13T22:53:51,435 2 location(s) to search for versions of gimmemotifs: 2023-09-13T22:53:51,435 * https://pypi.org/simple/gimmemotifs/ 2023-09-13T22:53:51,435 * https://www.piwheels.org/simple/gimmemotifs/ 2023-09-13T22:53:51,436 Fetching project page and analyzing links: https://pypi.org/simple/gimmemotifs/ 2023-09-13T22:53:51,436 Getting page https://pypi.org/simple/gimmemotifs/ 2023-09-13T22:53:51,438 Found index url https://pypi.org/simple/ 2023-09-13T22:53:51,651 Fetched page https://pypi.org/simple/gimmemotifs/ as application/vnd.pypi.simple.v1+json 2023-09-13T22:53:51,656 Found link https://files.pythonhosted.org/packages/3b/66/216440ec9d7e3c075bd26b6ab13132bcebb42fc2dd20a8886a6bec347976/gimmemotifs-0.8.9.1.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.8.9.1 2023-09-13T22:53:51,657 Found link https://files.pythonhosted.org/packages/9a/64/35a8f9fdbf3d212a5a4a797bf862df63a3b53e1858b1d18480a4f7cfe1e6/gimmemotifs-0.9.0.2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.9.0.2 2023-09-13T22:53:51,657 Found link https://files.pythonhosted.org/packages/65/94/7402fe33e86c472e392ac203838c4e6d2c07a3dc421998d5e1c38dbcdcac/gimmemotifs-0.9.0.3.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.9.0.3 2023-09-13T22:53:51,658 Found link https://files.pythonhosted.org/packages/99/73/fc665e610b200b170a2701ecb2d298b8f51c9792e44e12b47a803ed1cf9e/gimmemotifs-0.10.0b1.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b1 2023-09-13T22:53:51,659 Found link https://files.pythonhosted.org/packages/e5/3a/cd3a48bbd49c2cdf325616da57ebe50b12135a4f60111cc4960573f29524/gimmemotifs-0.10.0b2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b2 2023-09-13T22:53:51,660 Found link https://files.pythonhosted.org/packages/98/be/6fdb2557d262d2dfd365fa8502205c6a1f72cfa8029d0d9c3fdb9420f3ff/gimmemotifs-0.10.0b4.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b4 2023-09-13T22:53:51,660 Found link https://files.pythonhosted.org/packages/d3/83/2ffdbeb78227407f2ac3f4390f27257630709a3653a2c42926b181381f75/gimmemotifs-0.10.0b5.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b5 2023-09-13T22:53:51,661 Found link https://files.pythonhosted.org/packages/90/2c/f9493aeaaf1cf10742d7a7bf251dfbfe4a82d53f5222379b0466ac8cacfe/gimmemotifs-0.10.0b6.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.10.0b6 2023-09-13T22:53:51,662 Found link https://files.pythonhosted.org/packages/82/a3/34326512c0e9418729124bf9f5fd5da54a9792d5e99e84fe0653f3c38d2e/gimmemotifs-0.11.0b0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.11.0b0 2023-09-13T22:53:51,663 Found link https://files.pythonhosted.org/packages/6c/b7/f04441424da981f03b69c21f2aa534aa4c6cee7aaea4a5e6b1887116bb08/gimmemotifs-0.11.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.11.0 2023-09-13T22:53:51,663 Found link https://files.pythonhosted.org/packages/e9/c6/6b7e7069dbadc7d14ddab5483ef1c98e7532a3a92d66d89ef5cb59d0ac7a/gimmemotifs-0.11.1.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.11.1 2023-09-13T22:53:51,664 Found link https://files.pythonhosted.org/packages/53/5b/9251735efaf7a76ed7694c03a7a47cc21290f71d3958581a425da4682c47/gimmemotifs-0.12.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.12.0 2023-09-13T22:53:51,665 Found link https://files.pythonhosted.org/packages/66/76/ec3ff69655c4bbb8b606db6f45608125fe91e8568dd5858187f8b1b9379c/gimmemotifs-0.13.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.13.0 2023-09-13T22:53:51,665 Found link https://files.pythonhosted.org/packages/80/e9/84e4a077680c2c6e2baaca829ac660e910014c0aa57cd5dc915564a5a001/gimmemotifs-0.13.1.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.13.1 2023-09-13T22:53:51,666 Found link https://files.pythonhosted.org/packages/24/d1/8505a7798bf8e06f4a0b7a54b51bbcd9c9e5361d0dd1f3a89e78f2784c65/gimmemotifs-0.14.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.14.0 2023-09-13T22:53:51,667 Found link https://files.pythonhosted.org/packages/ef/4c/1a19f42d88f7fb47a1589a0c535a9dff9d75d1317a8a1a099ef0195348f9/gimmemotifs-0.14.2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.14.2 2023-09-13T22:53:51,667 Found link https://files.pythonhosted.org/packages/1a/7d/113454d4ef0e960500067e0e4a0d0ed105318749c2e18f5be6542f22df48/gimmemotifs-0.14.3.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.14.3 2023-09-13T22:53:51,668 Found link https://files.pythonhosted.org/packages/f6/71/681a72802e005601ad8da3b695ada4eea8e56e8bd1f14d42d4d7248a24a4/gimmemotifs-0.14.4.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.14.4 2023-09-13T22:53:51,668 Found link https://files.pythonhosted.org/packages/5f/d9/43302fdb777ca8bad9739d81804644090b25011be4a0d2f99188a8849b40/gimmemotifs-0.15.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.15.0 2023-09-13T22:53:51,669 Found link https://files.pythonhosted.org/packages/de/a5/9a3804dda5730092769519f38a7bc736488cff60cf7c8f0f2f71eeeca3e4/gimmemotifs-0.15.2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.15.2 2023-09-13T22:53:51,670 Found link https://files.pythonhosted.org/packages/0c/bd/11e957138342aef4b2539818d1c548fce634e7b323961cdd9beedba3879c/gimmemotifs-0.15.3.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.15.3 2023-09-13T22:53:51,670 Found link https://files.pythonhosted.org/packages/2b/71/faeeb7d734b4163500ad2e62fc131e66f912a722b7b9f6ad902f3ed62923/gimmemotifs-0.16.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.16.0 2023-09-13T22:53:51,671 Found link https://files.pythonhosted.org/packages/90/56/831b7548562dce57014d87dc9731c4b5ec0747c74ce2dd30966e2e812c5e/gimmemotifs-0.17.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.17.0 2023-09-13T22:53:51,672 Found link https://files.pythonhosted.org/packages/c5/c3/2dbd6363f025cf4b06d938479a9b35dab0ca91e59259b16e0bd6eef8bea0/gimmemotifs-0.17.2.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.17.2 2023-09-13T22:53:51,672 Found link https://files.pythonhosted.org/packages/23/b1/31f5061ff2749292af7c70ec4f1c81afd1991ea4a2cb62c4e5235d3f1f1c/gimmemotifs-0.18.0.tar.gz (from https://pypi.org/simple/gimmemotifs/), version: 0.18.0 2023-09-13T22:53:51,673 Fetching project page and analyzing links: https://www.piwheels.org/simple/gimmemotifs/ 2023-09-13T22:53:51,674 Getting page https://www.piwheels.org/simple/gimmemotifs/ 2023-09-13T22:53:51,675 Found index url https://www.piwheels.org/simple/ 2023-09-13T22:53:51,931 Fetched page https://www.piwheels.org/simple/gimmemotifs/ as text/html 2023-09-13T22:53:51,956 Skipping link: No binaries permitted for gimmemotifs: 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https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.1-cp37-cp37m-linux_armv7l.whl#sha256=492713e17f8017582dec727d9fcd2b2f61bf5d21276adb839a332769c87a5afd (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-13T22:53:52,006 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.1-cp35-cp35m-linux_armv7l.whl#sha256=dc8ee240ae1b6343c2f843b3be8746928cbc19ea325e772f320e13b4eb95c4ca (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-13T22:53:52,006 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.1-cp35-cp35m-linux_armv6l.whl#sha256=dc8ee240ae1b6343c2f843b3be8746928cbc19ea325e772f320e13b4eb95c4ca (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-13T22:53:52,006 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.1-cp34-cp34m-linux_armv6l.whl#sha256=8bb0b78ec004de4a6e47b212b831b4762fdaae7ce5fae9c996a7b6bc8c95c1e3 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-13T22:53:52,007 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.1-cp34-cp34m-linux_armv7l.whl#sha256=8bb0b78ec004de4a6e47b212b831b4762fdaae7ce5fae9c996a7b6bc8c95c1e3 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-13T22:53:52,007 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp311-cp311-linux_armv7l.whl#sha256=d217b1e3151376436453faabdc0fd9d6f2bc09521f3abe74c7c175ca78d2045a (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-13T22:53:52,008 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp311-cp311-linux_armv6l.whl#sha256=d217b1e3151376436453faabdc0fd9d6f2bc09521f3abe74c7c175ca78d2045a (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-13T22:53:52,008 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp39-cp39-linux_armv7l.whl#sha256=4578af2cf7e0c8796980b9f5c87309d3bf6f25a3394eb569d4db3f99819fae86 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-13T22:53:52,009 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp39-cp39-linux_armv6l.whl#sha256=4578af2cf7e0c8796980b9f5c87309d3bf6f25a3394eb569d4db3f99819fae86 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-13T22:53:52,009 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp37-cp37m-linux_armv6l.whl#sha256=4fcf7c241d0be7c3cf6cbf538d027f79dff8c0e74de8dc43c9f2731b04cd5a6a (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-13T22:53:52,010 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp37-cp37m-linux_armv7l.whl#sha256=4fcf7c241d0be7c3cf6cbf538d027f79dff8c0e74de8dc43c9f2731b04cd5a6a (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-13T22:53:52,011 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp35-cp35m-linux_armv6l.whl#sha256=0c4940ef4ea69129a58fbbfdf350ea637b435f2f36e04ddfbc81dd3ac0057a01 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-13T22:53:52,011 Skipping link: No binaries permitted for gimmemotifs: https://www.piwheels.org/simple/gimmemotifs/gimmemotifs-0.13.0-cp35-cp35m-linux_armv7l.whl#sha256=0c4940ef4ea69129a58fbbfdf350ea637b435f2f36e04ddfbc81dd3ac0057a01 (from https://www.piwheels.org/simple/gimmemotifs/) 2023-09-13T22:53:52,012 Skipping link: not a file: https://www.piwheels.org/simple/gimmemotifs/ 2023-09-13T22:53:52,012 Skipping link: not a file: https://pypi.org/simple/gimmemotifs/ 2023-09-13T22:53:52,033 Given no hashes to check 1 links for project 'gimmemotifs': discarding no candidates 2023-09-13T22:53:52,051 Collecting gimmemotifs==0.16.0 2023-09-13T22:53:52,054 Created temporary directory: /tmp/pip-unpack-518crffq 2023-09-13T22:53:52,295 Downloading gimmemotifs-0.16.0.tar.gz (34.0 MB) 2023-09-13T22:54:09,778 Added gimmemotifs==0.16.0 from https://files.pythonhosted.org/packages/2b/71/faeeb7d734b4163500ad2e62fc131e66f912a722b7b9f6ad902f3ed62923/gimmemotifs-0.16.0.tar.gz to build tracker '/tmp/pip-build-tracker-4xgm07a1' 2023-09-13T22:54:09,780 Running setup.py (path:/tmp/pip-wheel-cfj4dud6/gimmemotifs_f5b41bc37da543ce94fc68b1e4e138c2/setup.py) egg_info for package gimmemotifs 2023-09-13T22:54:09,781 Created temporary directory: /tmp/pip-pip-egg-info-j3lkc7ls 2023-09-13T22:54:09,781 Preparing metadata (setup.py): started 2023-09-13T22:54:09,783 Running command python setup.py egg_info 2023-09-13T22:54:10,906 running egg_info 2023-09-13T22:54:10,907 creating /tmp/pip-pip-egg-info-j3lkc7ls/gimmemotifs.egg-info 2023-09-13T22:54:10,933 writing /tmp/pip-pip-egg-info-j3lkc7ls/gimmemotifs.egg-info/PKG-INFO 2023-09-13T22:54:10,936 writing dependency_links to /tmp/pip-pip-egg-info-j3lkc7ls/gimmemotifs.egg-info/dependency_links.txt 2023-09-13T22:54:10,938 writing requirements to /tmp/pip-pip-egg-info-j3lkc7ls/gimmemotifs.egg-info/requires.txt 2023-09-13T22:54:10,939 writing top-level names to /tmp/pip-pip-egg-info-j3lkc7ls/gimmemotifs.egg-info/top_level.txt 2023-09-13T22:54:10,941 writing manifest file '/tmp/pip-pip-egg-info-j3lkc7ls/gimmemotifs.egg-info/SOURCES.txt' 2023-09-13T22:54:11,047 reading manifest file '/tmp/pip-pip-egg-info-j3lkc7ls/gimmemotifs.egg-info/SOURCES.txt' 2023-09-13T22:54:11,049 reading manifest template 'MANIFEST.in' 2023-09-13T22:54:11,050 warning: no files found matching 'run_tests.py' 2023-09-13T22:54:11,125 adding license file 'COPYING' 2023-09-13T22:54:11,136 writing manifest file '/tmp/pip-pip-egg-info-j3lkc7ls/gimmemotifs.egg-info/SOURCES.txt' 2023-09-13T22:54:11,245 Preparing metadata (setup.py): finished with status 'done' 2023-09-13T22:54:11,249 Source in /tmp/pip-wheel-cfj4dud6/gimmemotifs_f5b41bc37da543ce94fc68b1e4e138c2 has version 0.16.0, which satisfies requirement gimmemotifs==0.16.0 from https://files.pythonhosted.org/packages/2b/71/faeeb7d734b4163500ad2e62fc131e66f912a722b7b9f6ad902f3ed62923/gimmemotifs-0.16.0.tar.gz 2023-09-13T22:54:11,250 Removed gimmemotifs==0.16.0 from https://files.pythonhosted.org/packages/2b/71/faeeb7d734b4163500ad2e62fc131e66f912a722b7b9f6ad902f3ed62923/gimmemotifs-0.16.0.tar.gz from build tracker '/tmp/pip-build-tracker-4xgm07a1' 2023-09-13T22:54:11,255 Created temporary directory: /tmp/pip-unpack-wddxwh1b 2023-09-13T22:54:11,256 Created temporary directory: /tmp/pip-unpack-m3xmpu2g 2023-09-13T22:54:11,282 Building wheels for collected packages: gimmemotifs 2023-09-13T22:54:11,286 Created temporary directory: /tmp/pip-wheel-_arrgxbh 2023-09-13T22:54:11,287 Building wheel for gimmemotifs (setup.py): started 2023-09-13T22:54:11,288 Destination directory: /tmp/pip-wheel-_arrgxbh 2023-09-13T22:54:11,289 Running command python setup.py bdist_wheel 2023-09-13T22:54:12,334 running bdist_wheel 2023-09-13T22:54:12,427 running build 2023-09-13T22:54:12,428 running build_py 2023-09-13T22:54:12,429 creating build 2023-09-13T22:54:12,429 creating build/src 2023-09-13T22:54:12,430 copying src/README -> build/src 2023-09-13T22:54:12,433 creating build/src/HMS 2023-09-13T22:54:12,433 copying src/HMS/theta0.txt -> build/src/HMS 2023-09-13T22:54:12,435 copying src/HMS/theta3.txt -> build/src/HMS 2023-09-13T22:54:12,437 copying src/HMS/theta1.txt -> build/src/HMS 2023-09-13T22:54:12,439 copying src/HMS/theta2.txt -> build/src/HMS 2023-09-13T22:54:12,441 copying src/HMS/hms -> build/src/HMS 2023-09-13T22:54:12,444 copying src/COPYING -> build/src 2023-09-13T22:54:12,446 creating build/src/MotifSampler 2023-09-13T22:54:12,447 copying src/MotifSampler/MotifSampler_i386 -> build/src/MotifSampler 2023-09-13T22:54:12,467 copying src/MotifSampler/CreateBackgroundModel_x86_64 -> build/src/MotifSampler 2023-09-13T22:54:12,490 copying src/MotifSampler/MotifSampler_x86_64 -> build/src/MotifSampler 2023-09-13T22:54:12,522 copying src/MotifSampler/CreateBackgroundModel_i386 -> build/src/MotifSampler 2023-09-13T22:54:12,539 creating build/src/Improbizer 2023-09-13T22:54:12,541 copying src/Improbizer/ameme_i386 -> build/src/Improbizer 2023-09-13T22:54:12,548 copying src/Improbizer/ameme_x86_64 -> build/src/Improbizer 2023-09-13T22:54:12,558 creating build/src/AMD 2023-09-13T22:54:12,561 copying src/AMD/AMD.bin -> build/src/AMD 2023-09-13T22:54:12,565 creating build/src/BioProspector 2023-09-13T22:54:12,566 copying src/BioProspector/COPYING -> build/src/BioProspector 2023-09-13T22:54:12,568 copying src/BioProspector/BioProspector.c -> build/src/BioProspector 2023-09-13T22:54:12,572 copying src/BioProspector/BioProspector -> build/src/BioProspector 2023-09-13T22:54:12,576 creating build/src/ChIPMunk 2023-09-13T22:54:12,577 copying src/ChIPMunk/chipmunk.jar -> build/src/ChIPMunk 2023-09-13T22:54:12,648 copying src/ChIPMunk/ChIPMunk.sh -> build/src/ChIPMunk 2023-09-13T22:54:12,650 creating build/src/posmo 2023-09-13T22:54:12,651 copying src/posmo/clusterwd -> build/src/posmo 2023-09-13T22:54:12,653 copying src/posmo/posmo -> build/src/posmo 2023-09-13T22:54:12,656 creating build/src/MDmodule 2023-09-13T22:54:12,657 copying src/MDmodule/COPYING -> build/src/MDmodule 2023-09-13T22:54:12,659 copying src/MDmodule/MDmodule.c -> build/src/MDmodule 2023-09-13T22:54:12,663 copying src/MDmodule/MDmodule -> build/src/MDmodule 2023-09-13T22:54:12,666 creating build/lib.linux-armv7l-cpython-311 2023-09-13T22:54:12,666 creating build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:12,667 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-13T22:54:13,456 compiling BioProspector... ok 2023-09-13T22:54:14,242 compiling MDmodule... ok 2023-09-13T22:54:14,242 copying src/MDmodule/MDmodule -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-13T22:54:14,246 copying build/src/MDmodule/MDmodule -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-13T22:54:14,249 copying src/BioProspector/BioProspector -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-13T22:54:14,253 copying build/src/BioProspector/BioProspector -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-13T22:54:14,256 copying src/posmo/posmo -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-13T22:54:14,259 copying src/posmo/clusterwd -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-13T22:54:14,262 copying src/AMD/AMD.bin -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-13T22:54:14,267 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ChIPMunk 2023-09-13T22:54:14,268 copying build/src/ChIPMunk/chipmunk.jar -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ChIPMunk 2023-09-13T22:54:14,338 copying build/src/ChIPMunk/ChIPMunk.sh -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ChIPMunk 2023-09-13T22:54:14,340 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS 2023-09-13T22:54:14,341 copying build/src/HMS/theta0.txt -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS 2023-09-13T22:54:14,343 copying build/src/HMS/theta3.txt -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS 2023-09-13T22:54:14,345 copying build/src/HMS/theta1.txt -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS 2023-09-13T22:54:14,346 copying build/src/HMS/theta2.txt -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS 2023-09-13T22:54:14,348 copying build/src/HMS/hms -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS 2023-09-13T22:54:14,352 copying build/src/MotifSampler/MotifSampler_x86_64 -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/MotifSampler 2023-09-13T22:54:14,379 copying build/src/MotifSampler/CreateBackgroundModel_x86_64 -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/CreateBackgroundModel 2023-09-13T22:54:14,407 copying build/src/Improbizer/ameme_x86_64 -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ameme 2023-09-13T22:54:14,421 copying gimmemotifs/denovo.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,423 copying gimmemotifs/fasta.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,425 copying gimmemotifs/__init__.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,427 copying gimmemotifs/orthologs.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,429 copying gimmemotifs/_version.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,431 copying gimmemotifs/config.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,433 copying gimmemotifs/motif.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,436 copying gimmemotifs/rank.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,439 copying gimmemotifs/comparison.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,441 copying gimmemotifs/stats.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,444 copying gimmemotifs/background.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,447 copying gimmemotifs/rocmetrics.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,449 copying gimmemotifs/report.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,452 copying gimmemotifs/validation.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,453 copying gimmemotifs/moap.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,456 copying gimmemotifs/cli.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,459 copying gimmemotifs/maelstrom.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,462 copying gimmemotifs/prediction.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,464 copying gimmemotifs/plot.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,467 copying gimmemotifs/scanner.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,470 copying gimmemotifs/preprocessing.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,472 copying gimmemotifs/utils.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,475 copying gimmemotifs/utils.fix.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,478 copying gimmemotifs/shutils.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,480 copying gimmemotifs/cluster.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:14,482 creating build/lib.linux-armv7l-cpython-311/data 2023-09-13T22:54:14,483 copying data/__init__.py -> build/lib.linux-armv7l-cpython-311/data 2023-09-13T22:54:14,485 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/db 2023-09-13T22:54:14,486 copying gimmemotifs/db/__init__.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/db 2023-09-13T22:54:14,490 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-13T22:54:14,491 copying gimmemotifs/commands/__init__.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-13T22:54:14,493 copying gimmemotifs/commands/threshold.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-13T22:54:14,495 copying gimmemotifs/commands/background.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-13T22:54:14,497 copying gimmemotifs/commands/logo.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-13T22:54:14,499 copying gimmemotifs/commands/match.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-13T22:54:14,501 copying gimmemotifs/commands/location.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-13T22:54:14,503 copying gimmemotifs/commands/pfmscan.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-13T22:54:14,504 copying gimmemotifs/commands/motif2factors.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-13T22:54:14,506 copying gimmemotifs/commands/maelstrom.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-13T22:54:14,508 copying gimmemotifs/commands/prediction.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-13T22:54:14,510 copying gimmemotifs/commands/motifs.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-13T22:54:14,512 copying gimmemotifs/commands/cluster.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-13T22:54:14,514 copying gimmemotifs/commands/diff.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/commands 2023-09-13T22:54:14,516 copying gimmemotifs/included_tools/__init__.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools 2023-09-13T22:54:14,519 creating build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,520 copying gimmemotifs/tools/motifsampler.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,522 copying gimmemotifs/tools/__init__.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,524 copying gimmemotifs/tools/rpmcmc.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,525 copying gimmemotifs/tools/improbizer.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,527 copying gimmemotifs/tools/weeder.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,529 copying gimmemotifs/tools/jaspar.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,531 copying gimmemotifs/tools/memew.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,533 copying gimmemotifs/tools/bioprospector.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,535 copying gimmemotifs/tools/dinamo.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,537 copying gimmemotifs/tools/posmo.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,539 copying gimmemotifs/tools/dreme.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,541 copying gimmemotifs/tools/meme.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,543 copying gimmemotifs/tools/chipmunk.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,545 copying gimmemotifs/tools/amd.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,547 copying gimmemotifs/tools/gadem.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,549 copying gimmemotifs/tools/prosampler.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,551 copying gimmemotifs/tools/homer.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,553 copying gimmemotifs/tools/trawler.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,555 copying gimmemotifs/tools/hms.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,557 copying gimmemotifs/tools/yamda.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,559 copying gimmemotifs/tools/mdmodule.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,561 copying gimmemotifs/tools/xxmotif.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,563 copying gimmemotifs/tools/motifprogram.py -> build/lib.linux-armv7l-cpython-311/gimmemotifs/tools 2023-09-13T22:54:14,565 running egg_info 2023-09-13T22:54:14,625 writing gimmemotifs.egg-info/PKG-INFO 2023-09-13T22:54:14,628 writing dependency_links to gimmemotifs.egg-info/dependency_links.txt 2023-09-13T22:54:14,630 writing requirements to gimmemotifs.egg-info/requires.txt 2023-09-13T22:54:14,631 writing top-level names to gimmemotifs.egg-info/top_level.txt 2023-09-13T22:54:14,668 reading manifest file 'gimmemotifs.egg-info/SOURCES.txt' 2023-09-13T22:54:14,720 reading manifest template 'MANIFEST.in' 2023-09-13T22:54:14,721 warning: no files found matching 'run_tests.py' 2023-09-13T22:54:14,789 adding license file 'COPYING' 2023-09-13T22:54:14,809 writing manifest file 'gimmemotifs.egg-info/SOURCES.txt' 2023-09-13T22:54:14,813 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.bg' is absent from the `packages` configuration. 2023-09-13T22:54:14,813 !! 2023-09-13T22:54:14,814 ******************************************************************************** 2023-09-13T22:54:14,815 ############################ 2023-09-13T22:54:14,815 # Package would be ignored # 2023-09-13T22:54:14,816 ############################ 2023-09-13T22:54:14,816 Python recognizes 'data.bg' as an importable package[^1], 2023-09-13T22:54:14,816 but it is absent from setuptools' `packages` configuration. 2023-09-13T22:54:14,817 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-13T22:54:14,818 package, please make sure that 'data.bg' is explicitly added 2023-09-13T22:54:14,818 to the `packages` configuration field. 2023-09-13T22:54:14,819 Alternatively, you can also rely on setuptools' discovery methods 2023-09-13T22:54:14,820 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-13T22:54:14,821 instead of `find_packages(...)`/`find:`). 2023-09-13T22:54:14,822 You can read more about "package discovery" on setuptools documentation page: 2023-09-13T22:54:14,823 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-13T22:54:14,824 If you don't want 'data.bg' to be distributed and are 2023-09-13T22:54:14,825 already explicitly excluding 'data.bg' via 2023-09-13T22:54:14,826 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-13T22:54:14,826 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-13T22:54:14,827 combination with a more fine grained `package-data` configuration. 2023-09-13T22:54:14,828 You can read more about "package data files" on setuptools documentation page: 2023-09-13T22:54:14,829 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-13T22:54:14,831 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-13T22:54:14,831 even if it does not contain any `.py` files. 2023-09-13T22:54:14,832 On the other hand, currently there is no concept of package data 2023-09-13T22:54:14,832 directory, all directories are treated like packages. 2023-09-13T22:54:14,833 ******************************************************************************** 2023-09-13T22:54:14,834 !! 2023-09-13T22:54:14,834 check.warn(importable) 2023-09-13T22:54:14,835 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.cfg' is absent from the `packages` configuration. 2023-09-13T22:54:14,835 !! 2023-09-13T22:54:14,836 ******************************************************************************** 2023-09-13T22:54:14,837 ############################ 2023-09-13T22:54:14,837 # Package would be ignored # 2023-09-13T22:54:14,838 ############################ 2023-09-13T22:54:14,839 Python recognizes 'data.cfg' as an importable package[^1], 2023-09-13T22:54:14,839 but it is absent from setuptools' `packages` configuration. 2023-09-13T22:54:14,840 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-13T22:54:14,841 package, please make sure that 'data.cfg' is explicitly added 2023-09-13T22:54:14,841 to the `packages` configuration field. 2023-09-13T22:54:14,842 Alternatively, you can also rely on setuptools' discovery methods 2023-09-13T22:54:14,843 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-13T22:54:14,843 instead of `find_packages(...)`/`find:`). 2023-09-13T22:54:14,844 You can read more about "package discovery" on setuptools documentation page: 2023-09-13T22:54:14,845 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-13T22:54:14,846 If you don't want 'data.cfg' to be distributed and are 2023-09-13T22:54:14,847 already explicitly excluding 'data.cfg' via 2023-09-13T22:54:14,848 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-13T22:54:14,848 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-13T22:54:14,848 combination with a more fine grained `package-data` configuration. 2023-09-13T22:54:14,850 You can read more about "package data files" on setuptools documentation page: 2023-09-13T22:54:14,851 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-13T22:54:14,853 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-13T22:54:14,853 even if it does not contain any `.py` files. 2023-09-13T22:54:14,854 On the other hand, currently there is no concept of package data 2023-09-13T22:54:14,854 directory, all directories are treated like packages. 2023-09-13T22:54:14,855 ******************************************************************************** 2023-09-13T22:54:14,856 !! 2023-09-13T22:54:14,856 check.warn(importable) 2023-09-13T22:54:14,857 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.examples' is absent from the `packages` configuration. 2023-09-13T22:54:14,857 !! 2023-09-13T22:54:14,859 ******************************************************************************** 2023-09-13T22:54:14,859 ############################ 2023-09-13T22:54:14,860 # Package would be ignored # 2023-09-13T22:54:14,860 ############################ 2023-09-13T22:54:14,860 Python recognizes 'data.examples' as an importable package[^1], 2023-09-13T22:54:14,861 but it is absent from setuptools' `packages` configuration. 2023-09-13T22:54:14,862 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-13T22:54:14,863 package, please make sure that 'data.examples' is explicitly added 2023-09-13T22:54:14,863 to the `packages` configuration field. 2023-09-13T22:54:14,864 Alternatively, you can also rely on setuptools' discovery methods 2023-09-13T22:54:14,865 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-13T22:54:14,865 instead of `find_packages(...)`/`find:`). 2023-09-13T22:54:14,866 You can read more about "package discovery" on setuptools documentation page: 2023-09-13T22:54:14,867 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-13T22:54:14,869 If you don't want 'data.examples' to be distributed and are 2023-09-13T22:54:14,869 already explicitly excluding 'data.examples' via 2023-09-13T22:54:14,870 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-13T22:54:14,870 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-13T22:54:14,871 combination with a more fine grained `package-data` configuration. 2023-09-13T22:54:14,872 You can read more about "package data files" on setuptools documentation page: 2023-09-13T22:54:14,873 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-13T22:54:14,874 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-13T22:54:14,875 even if it does not contain any `.py` files. 2023-09-13T22:54:14,875 On the other hand, currently there is no concept of package data 2023-09-13T22:54:14,876 directory, all directories are treated like packages. 2023-09-13T22:54:14,876 ******************************************************************************** 2023-09-13T22:54:14,878 !! 2023-09-13T22:54:14,879 check.warn(importable) 2023-09-13T22:54:14,879 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.motif_databases' is absent from the `packages` configuration. 2023-09-13T22:54:14,880 !! 2023-09-13T22:54:14,881 ******************************************************************************** 2023-09-13T22:54:14,881 ############################ 2023-09-13T22:54:14,882 # Package would be ignored # 2023-09-13T22:54:14,882 ############################ 2023-09-13T22:54:14,883 Python recognizes 'data.motif_databases' as an importable package[^1], 2023-09-13T22:54:14,883 but it is absent from setuptools' `packages` configuration. 2023-09-13T22:54:14,884 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-13T22:54:14,885 package, please make sure that 'data.motif_databases' is explicitly added 2023-09-13T22:54:14,886 to the `packages` configuration field. 2023-09-13T22:54:14,887 Alternatively, you can also rely on setuptools' discovery methods 2023-09-13T22:54:14,890 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-13T22:54:14,891 instead of `find_packages(...)`/`find:`). 2023-09-13T22:54:14,892 You can read more about "package discovery" on setuptools documentation page: 2023-09-13T22:54:14,893 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-13T22:54:14,894 If you don't want 'data.motif_databases' to be distributed and are 2023-09-13T22:54:14,895 already explicitly excluding 'data.motif_databases' via 2023-09-13T22:54:14,896 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-13T22:54:14,896 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-13T22:54:14,897 combination with a more fine grained `package-data` configuration. 2023-09-13T22:54:14,898 You can read more about "package data files" on setuptools documentation page: 2023-09-13T22:54:14,900 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-13T22:54:14,901 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-13T22:54:14,902 even if it does not contain any `.py` files. 2023-09-13T22:54:14,903 On the other hand, currently there is no concept of package data 2023-09-13T22:54:14,903 directory, all directories are treated like packages. 2023-09-13T22:54:14,904 ******************************************************************************** 2023-09-13T22:54:14,905 !! 2023-09-13T22:54:14,906 check.warn(importable) 2023-09-13T22:54:14,907 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.score_dists' is absent from the `packages` configuration. 2023-09-13T22:54:14,908 !! 2023-09-13T22:54:14,909 ******************************************************************************** 2023-09-13T22:54:14,910 ############################ 2023-09-13T22:54:14,911 # Package would be ignored # 2023-09-13T22:54:14,911 ############################ 2023-09-13T22:54:14,912 Python recognizes 'data.score_dists' as an importable package[^1], 2023-09-13T22:54:14,913 but it is absent from setuptools' `packages` configuration. 2023-09-13T22:54:14,914 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-13T22:54:14,915 package, please make sure that 'data.score_dists' is explicitly added 2023-09-13T22:54:14,916 to the `packages` configuration field. 2023-09-13T22:54:14,917 Alternatively, you can also rely on setuptools' discovery methods 2023-09-13T22:54:14,919 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-13T22:54:14,920 instead of `find_packages(...)`/`find:`). 2023-09-13T22:54:14,922 You can read more about "package discovery" on setuptools documentation page: 2023-09-13T22:54:14,923 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-13T22:54:14,923 If you don't want 'data.score_dists' to be distributed and are 2023-09-13T22:54:14,924 already explicitly excluding 'data.score_dists' via 2023-09-13T22:54:14,924 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-13T22:54:14,925 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-13T22:54:14,925 combination with a more fine grained `package-data` configuration. 2023-09-13T22:54:14,927 You can read more about "package data files" on setuptools documentation page: 2023-09-13T22:54:14,928 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-13T22:54:14,930 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-13T22:54:14,931 even if it does not contain any `.py` files. 2023-09-13T22:54:14,931 On the other hand, currently there is no concept of package data 2023-09-13T22:54:14,932 directory, all directories are treated like packages. 2023-09-13T22:54:14,932 ******************************************************************************** 2023-09-13T22:54:14,933 !! 2023-09-13T22:54:14,934 check.warn(importable) 2023-09-13T22:54:14,935 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.templates' is absent from the `packages` configuration. 2023-09-13T22:54:14,935 !! 2023-09-13T22:54:14,936 ******************************************************************************** 2023-09-13T22:54:14,937 ############################ 2023-09-13T22:54:14,937 # Package would be ignored # 2023-09-13T22:54:14,938 ############################ 2023-09-13T22:54:14,939 Python recognizes 'data.templates' as an importable package[^1], 2023-09-13T22:54:14,940 but it is absent from setuptools' `packages` configuration. 2023-09-13T22:54:14,941 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-13T22:54:14,942 package, please make sure that 'data.templates' is explicitly added 2023-09-13T22:54:14,942 to the `packages` configuration field. 2023-09-13T22:54:14,943 Alternatively, you can also rely on setuptools' discovery methods 2023-09-13T22:54:14,944 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-13T22:54:14,944 instead of `find_packages(...)`/`find:`). 2023-09-13T22:54:14,946 You can read more about "package discovery" on setuptools documentation page: 2023-09-13T22:54:14,947 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-13T22:54:14,948 If you don't want 'data.templates' to be distributed and are 2023-09-13T22:54:14,949 already explicitly excluding 'data.templates' via 2023-09-13T22:54:14,949 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-13T22:54:14,950 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-13T22:54:14,950 combination with a more fine grained `package-data` configuration. 2023-09-13T22:54:14,952 You can read more about "package data files" on setuptools documentation page: 2023-09-13T22:54:14,953 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-13T22:54:14,954 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-13T22:54:14,955 even if it does not contain any `.py` files. 2023-09-13T22:54:14,956 On the other hand, currently there is no concept of package data 2023-09-13T22:54:14,956 directory, all directories are treated like packages. 2023-09-13T22:54:14,957 ******************************************************************************** 2023-09-13T22:54:14,964 !! 2023-09-13T22:54:14,981 check.warn(importable) 2023-09-13T22:54:14,987 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'data.templates.sortable' is absent from the `packages` configuration. 2023-09-13T22:54:14,988 !! 2023-09-13T22:54:14,990 ******************************************************************************** 2023-09-13T22:54:14,990 ############################ 2023-09-13T22:54:14,991 # Package would be ignored # 2023-09-13T22:54:14,991 ############################ 2023-09-13T22:54:14,992 Python recognizes 'data.templates.sortable' as an importable package[^1], 2023-09-13T22:54:14,993 but it is absent from setuptools' `packages` configuration. 2023-09-13T22:54:14,994 This leads to an ambiguous overall configuration. If you want to distribute this 2023-09-13T22:54:14,995 package, please make sure that 'data.templates.sortable' is explicitly added 2023-09-13T22:54:14,996 to the `packages` configuration field. 2023-09-13T22:54:14,997 Alternatively, you can also rely on setuptools' discovery methods 2023-09-13T22:54:14,997 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-09-13T22:54:14,998 instead of `find_packages(...)`/`find:`). 2023-09-13T22:54:15,000 You can read more about "package discovery" on setuptools documentation page: 2023-09-13T22:54:15,004 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-09-13T22:54:15,013 If you don't want 'data.templates.sortable' to be distributed and are 2023-09-13T22:54:15,014 already explicitly excluding 'data.templates.sortable' via 2023-09-13T22:54:15,014 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-09-13T22:54:15,015 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-09-13T22:54:15,016 combination with a more fine grained `package-data` configuration. 2023-09-13T22:54:15,017 You can read more about "package data files" on setuptools documentation page: 2023-09-13T22:54:15,018 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-09-13T22:54:15,020 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-09-13T22:54:15,020 even if it does not contain any `.py` files. 2023-09-13T22:54:15,021 On the other hand, currently there is no concept of package data 2023-09-13T22:54:15,022 directory, all directories are treated like packages. 2023-09-13T22:54:15,022 ******************************************************************************** 2023-09-13T22:54:15,025 !! 2023-09-13T22:54:15,028 check.warn(importable) 2023-09-13T22:54:15,030 copying gimmemotifs/c_metrics.c -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:15,030 copying gimmemotifs/cpp_metrics.cpp -> build/lib.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:15,031 copying data/test.develop.out -> build/lib.linux-armv7l-cpython-311/data 2023-09-13T22:54:15,032 creating build/lib.linux-armv7l-cpython-311/data/bg 2023-09-13T22:54:15,033 copying data/bg/hg18.MotifSampler.bg -> build/lib.linux-armv7l-cpython-311/data/bg 2023-09-13T22:54:15,033 copying data/bg/hg19.MotifSampler.bg -> build/lib.linux-armv7l-cpython-311/data/bg 2023-09-13T22:54:15,034 copying data/bg/hg38.MotifSampler.bg -> build/lib.linux-armv7l-cpython-311/data/bg 2023-09-13T22:54:15,036 copying data/bg/mm10.MotifSampler.bg -> build/lib.linux-armv7l-cpython-311/data/bg 2023-09-13T22:54:15,037 copying data/bg/mm9.MotifSampler.bg -> build/lib.linux-armv7l-cpython-311/data/bg 2023-09-13T22:54:15,037 copying data/bg/xenTro2.MotifSampler.bg -> build/lib.linux-armv7l-cpython-311/data/bg 2023-09-13T22:54:15,038 creating build/lib.linux-armv7l-cpython-311/data/cfg 2023-09-13T22:54:15,038 copying data/cfg/gimmemotifs.default.cfg -> build/lib.linux-armv7l-cpython-311/data/cfg 2023-09-13T22:54:15,040 creating build/lib.linux-armv7l-cpython-311/data/examples 2023-09-13T22:54:15,042 copying data/examples/Gm12878.CTCF.top500.w200.fa -> build/lib.linux-armv7l-cpython-311/data/examples 2023-09-13T22:54:15,044 copying data/examples/MA0099.3.jaspar -> build/lib.linux-armv7l-cpython-311/data/examples 2023-09-13T22:54:15,046 copying data/examples/TAp73alpha.bed -> build/lib.linux-armv7l-cpython-311/data/examples 2023-09-13T22:54:15,046 copying data/examples/TAp73alpha.fa -> build/lib.linux-armv7l-cpython-311/data/examples 2023-09-13T22:54:15,047 copying data/examples/example.pfm -> build/lib.linux-armv7l-cpython-311/data/examples 2023-09-13T22:54:15,047 copying data/examples/test.small.fa -> build/lib.linux-armv7l-cpython-311/data/examples 2023-09-13T22:54:15,048 creating build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,049 copying data/motif_databases/CIS-BP.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,049 copying data/motif_databases/CIS-BP.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,050 copying data/motif_databases/ENCODE.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,051 copying data/motif_databases/ENCODE.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,051 copying data/motif_databases/HOCOMOCOv10_HUMAN.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,052 copying data/motif_databases/HOCOMOCOv10_HUMAN.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,053 copying data/motif_databases/HOCOMOCOv10_MOUSE.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,057 copying data/motif_databases/HOCOMOCOv10_MOUSE.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,058 copying data/motif_databases/HOCOMOCOv11_HUMAN.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,059 copying data/motif_databases/HOCOMOCOv11_HUMAN.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,059 copying data/motif_databases/HOCOMOCOv11_MOUSE.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,062 copying data/motif_databases/HOCOMOCOv11_MOUSE.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,070 copying data/motif_databases/HOMER.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,073 copying data/motif_databases/HOMER.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,077 copying data/motif_databases/IMAGE.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,081 copying data/motif_databases/IMAGE.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,101 copying data/motif_databases/JASPAR2018.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,104 copying data/motif_databases/JASPAR2018.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,117 copying data/motif_databases/JASPAR2018_fungi.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,119 copying data/motif_databases/JASPAR2018_fungi.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,123 copying data/motif_databases/JASPAR2018_insects.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,125 copying data/motif_databases/JASPAR2018_insects.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,128 copying data/motif_databases/JASPAR2018_nematodes.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,130 copying data/motif_databases/JASPAR2018_nematodes.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,133 copying data/motif_databases/JASPAR2018_plants.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,135 copying data/motif_databases/JASPAR2018_plants.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,140 copying data/motif_databases/JASPAR2018_urochordates.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,142 copying data/motif_databases/JASPAR2018_urochordates.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,144 copying data/motif_databases/JASPAR2018_vertebrates.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,147 copying data/motif_databases/JASPAR2018_vertebrates.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,152 copying data/motif_databases/JASPAR2020.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,156 copying data/motif_databases/JASPAR2020.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,169 copying data/motif_databases/JASPAR2020_fungi.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,172 copying data/motif_databases/JASPAR2020_fungi.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,176 copying data/motif_databases/JASPAR2020_insects.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,179 copying data/motif_databases/JASPAR2020_insects.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,183 copying data/motif_databases/JASPAR2020_nematodes.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,185 copying data/motif_databases/JASPAR2020_nematodes.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,188 copying data/motif_databases/JASPAR2020_plants.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,192 copying data/motif_databases/JASPAR2020_plants.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,201 copying data/motif_databases/JASPAR2020_urochordates.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,204 copying data/motif_databases/JASPAR2020_urochordates.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,206 copying data/motif_databases/JASPAR2020_vertebrates.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,210 copying data/motif_databases/JASPAR2020_vertebrates.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,219 copying data/motif_databases/RSAT_insects.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,221 copying data/motif_databases/RSAT_insects.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,226 copying data/motif_databases/RSAT_plants.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,229 copying data/motif_databases/RSAT_plants.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,234 copying data/motif_databases/RSAT_vertebrates.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,236 copying data/motif_databases/RSAT_vertebrates.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,252 copying data/motif_databases/SwissRegulon.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,254 copying data/motif_databases/SwissRegulon.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,260 copying data/motif_databases/factorbook.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,263 copying data/motif_databases/factorbook.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,269 copying data/motif_databases/gimme.invertebrate.v1.0.pwm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,277 copying data/motif_databases/gimme.plant.v1.0.pwm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,282 copying data/motif_databases/gimme.vertebrate.v3.1.factor2motifs.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,287 copying data/motif_databases/gimme.vertebrate.v3.1.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,291 copying data/motif_databases/gimme.vertebrate.v3.1.pwm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,311 copying data/motif_databases/gimme.vertebrate.v5.0.motif2factors.txt -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,323 copying data/motif_databases/gimme.vertebrate.v5.0.pfm -> build/lib.linux-armv7l-cpython-311/data/motif_databases 2023-09-13T22:54:15,345 creating build/lib.linux-armv7l-cpython-311/data/score_dists 2023-09-13T22:54:15,346 copying data/score_dists/dic2_bg_mean_sd.txt -> build/lib.linux-armv7l-cpython-311/data/score_dists 2023-09-13T22:54:15,349 copying data/score_dists/dic2_mean_sd.txt -> build/lib.linux-armv7l-cpython-311/data/score_dists 2023-09-13T22:54:15,352 copying data/score_dists/total_wic_mean_score_dist.txt -> build/lib.linux-armv7l-cpython-311/data/score_dists 2023-09-13T22:54:15,355 creating build/lib.linux-armv7l-cpython-311/data/templates 2023-09-13T22:54:15,356 copying data/templates/cluster_template.jinja.html -> build/lib.linux-armv7l-cpython-311/data/templates 2023-09-13T22:54:15,359 copying data/templates/report_template.jinja.html -> build/lib.linux-armv7l-cpython-311/data/templates 2023-09-13T22:54:15,362 copying data/templates/star.png -> build/lib.linux-armv7l-cpython-311/data/templates 2023-09-13T22:54:15,365 copying data/templates/star_silver.png -> build/lib.linux-armv7l-cpython-311/data/templates 2023-09-13T22:54:15,369 copying data/templates/table.tpl -> build/lib.linux-armv7l-cpython-311/data/templates 2023-09-13T22:54:15,371 creating build/lib.linux-armv7l-cpython-311/data/templates/sortable 2023-09-13T22:54:15,372 copying data/templates/sortable/sortable-theme-slick.css -> build/lib.linux-armv7l-cpython-311/data/templates/sortable 2023-09-13T22:54:15,375 copying data/templates/sortable/sortable.min.js -> build/lib.linux-armv7l-cpython-311/data/templates/sortable 2023-09-13T22:54:15,382 UPDATING build/lib.linux-armv7l-cpython-311/gimmemotifs/_version.py 2023-09-13T22:54:15,383 set build/lib.linux-armv7l-cpython-311/gimmemotifs/_version.py to '0.16.0' 2023-09-13T22:54:15,384 running build_ext 2023-09-13T22:54:15,894 building 'gimmemotifs.c_metrics' extension 2023-09-13T22:54:15,895 creating build/temp.linux-armv7l-cpython-311 2023-09-13T22:54:15,896 creating build/temp.linux-armv7l-cpython-311/gimmemotifs 2023-09-13T22:54:15,897 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c gimmemotifs/c_metrics.c -o build/temp.linux-armv7l-cpython-311/gimmemotifs/c_metrics.o 2023-09-13T22:54:16,253 gimmemotifs/c_metrics.c: In function ‘get_truncate_len’: 2023-09-13T22:54:16,253 gimmemotifs/c_metrics.c:314:5: warning: type of ‘len1’ defaults to ‘int’ [-Wimplicit-int] 2023-09-13T22:54:16,254 314 | int get_truncate_len(len1, len2, pos) { 2023-09-13T22:54:16,254 | ^~~~~~~~~~~~~~~~ 2023-09-13T22:54:16,255 gimmemotifs/c_metrics.c:314:5: warning: type of ‘len2’ defaults to ‘int’ [-Wimplicit-int] 2023-09-13T22:54:16,255 gimmemotifs/c_metrics.c:314:5: warning: type of ‘pos’ defaults to ‘int’ [-Wimplicit-int] 2023-09-13T22:54:16,260 gimmemotifs/c_metrics.c: In function ‘c_metrics_pwmscan’: 2023-09-13T22:54:16,261 gimmemotifs/c_metrics.c:549:16: warning: unused variable ‘pwm_min’ [-Wunused-variable] 2023-09-13T22:54:16,261 549 | double pwm_min = -50; 2023-09-13T22:54:16,262 | ^~~~~~~ 2023-09-13T22:54:16,263 gimmemotifs/c_metrics.c:548:13: warning: unused variable ‘c’ [-Wunused-variable] 2023-09-13T22:54:16,263 548 | int c; 2023-09-13T22:54:16,264 | ^ 2023-09-13T22:54:16,266 gimmemotifs/c_metrics.c: At top level: 2023-09-13T22:54:16,266 gimmemotifs/c_metrics.c:886:22: warning: initialization of ‘int’ from ‘void *’ makes integer from pointer without a cast [-Wint-conversion] 2023-09-13T22:54:16,267 886 | {NULL, NULL, NULL, 0, NULL} 2023-09-13T22:54:16,268 | ^~~~ 2023-09-13T22:54:16,269 gimmemotifs/c_metrics.c:886:22: note: (near initialization for ‘CoreMethods[4].ml_flags’) 2023-09-13T22:54:16,270 gimmemotifs/c_metrics.c:886:31: warning: excess elements in struct initializer 2023-09-13T22:54:16,271 886 | {NULL, NULL, NULL, 0, NULL} 2023-09-13T22:54:16,272 | ^~~~ 2023-09-13T22:54:16,273 gimmemotifs/c_metrics.c:886:31: note: (near initialization for ‘CoreMethods[4]’) 2023-09-13T22:54:17,596 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/gimmemotifs/c_metrics.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/gimmemotifs/c_metrics.cpython-311-arm-linux-gnueabihf.so 2023-09-13T22:54:17,688 running build_scripts 2023-09-13T22:54:17,688 creating build/scripts-3.11 2023-09-13T22:54:17,689 copying and adjusting scripts/gimme -> build/scripts-3.11 2023-09-13T22:54:17,691 copying and adjusting scripts/combine_peaks -> build/scripts-3.11 2023-09-13T22:54:17,693 copying and adjusting scripts/coverage_table -> build/scripts-3.11 2023-09-13T22:54:17,694 changing mode of build/scripts-3.11/gimme from 644 to 755 2023-09-13T22:54:17,695 changing mode of build/scripts-3.11/combine_peaks from 644 to 755 2023-09-13T22:54:17,695 changing mode of build/scripts-3.11/coverage_table from 644 to 755 2023-09-13T22:54:17,719 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-09-13T22:54:17,720 !! 2023-09-13T22:54:17,721 ******************************************************************************** 2023-09-13T22:54:17,722 Please avoid running ``setup.py`` directly. 2023-09-13T22:54:17,722 Instead, use pypa/build, pypa/installer or other 2023-09-13T22:54:17,723 standards-based tools. 2023-09-13T22:54:17,724 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-09-13T22:54:17,725 ******************************************************************************** 2023-09-13T22:54:17,726 !! 2023-09-13T22:54:17,726 self.initialize_options() 2023-09-13T22:54:17,745 installing to build/bdist.linux-armv7l/wheel 2023-09-13T22:54:17,745 running install 2023-09-13T22:54:17,769 running install_lib 2023-09-13T22:54:17,793 creating build/bdist.linux-armv7l 2023-09-13T22:54:17,794 creating build/bdist.linux-armv7l/wheel 2023-09-13T22:54:17,796 creating build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,797 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/denovo.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,800 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/fasta.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,802 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,804 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/orthologs.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,807 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/_version.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,809 creating build/bdist.linux-armv7l/wheel/gimmemotifs/db 2023-09-13T22:54:17,811 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/db/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/db 2023-09-13T22:54:17,814 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/config.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,816 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/cpp_metrics.cpp -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,818 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/motif.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,822 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/rank.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,824 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/comparison.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,827 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/stats.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,830 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/c_metrics.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,834 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/background.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,837 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/rocmetrics.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,840 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/report.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,843 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/validation.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,846 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/c_metrics.c -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,849 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/moap.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,852 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/cli.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,855 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/maelstrom.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,858 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/prediction.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,861 creating build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-13T22:54:17,862 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-13T22:54:17,865 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/threshold.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-13T22:54:17,867 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/background.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-13T22:54:17,869 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/logo.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-13T22:54:17,871 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/match.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-13T22:54:17,873 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/location.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-13T22:54:17,875 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/pfmscan.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-13T22:54:17,877 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/motif2factors.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-13T22:54:17,879 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/maelstrom.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-13T22:54:17,881 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/prediction.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-13T22:54:17,883 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/motifs.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-13T22:54:17,886 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/cluster.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-13T22:54:17,888 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/commands/diff.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/commands 2023-09-13T22:54:17,890 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/plot.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,893 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/scanner.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,896 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/preprocessing.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:17,899 creating build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-13T22:54:17,901 creating build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-09-13T22:54:17,902 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS/theta0.txt -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-09-13T22:54:17,904 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS/theta3.txt -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-09-13T22:54:17,906 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS/theta1.txt -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-09-13T22:54:17,909 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS/theta2.txt -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-09-13T22:54:17,910 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/HMS/hms -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/HMS 2023-09-13T22:54:17,914 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-13T22:54:17,916 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/MotifSampler -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-13T22:54:17,943 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ameme -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-13T22:54:17,952 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/AMD.bin -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-13T22:54:17,956 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/clusterwd -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-13T22:54:17,959 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/BioProspector -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-13T22:54:17,962 creating build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/ChIPMunk 2023-09-13T22:54:17,963 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ChIPMunk/chipmunk.jar -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/ChIPMunk 2023-09-13T22:54:18,036 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/ChIPMunk/ChIPMunk.sh -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools/ChIPMunk 2023-09-13T22:54:18,038 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/posmo -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-13T22:54:18,040 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/CreateBackgroundModel -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-13T22:54:18,064 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/included_tools/MDmodule -> build/bdist.linux-armv7l/wheel/gimmemotifs/included_tools 2023-09-13T22:54:18,068 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/utils.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:18,071 creating build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,072 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/motifsampler.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,075 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/__init__.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,078 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/rpmcmc.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,080 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/improbizer.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,082 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/weeder.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,085 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/jaspar.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,087 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/memew.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,089 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/bioprospector.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,092 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/dinamo.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,094 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/posmo.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,096 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/dreme.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,099 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/meme.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,101 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/chipmunk.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,104 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/amd.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,107 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/gadem.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,109 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/prosampler.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,111 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/homer.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,114 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/trawler.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,117 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/hms.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,119 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/yamda.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,122 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/mdmodule.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,124 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/xxmotif.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,126 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/tools/motifprogram.py -> build/bdist.linux-armv7l/wheel/gimmemotifs/tools 2023-09-13T22:54:18,128 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/utils.fix.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:18,131 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/shutils.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:18,134 copying build/lib.linux-armv7l-cpython-311/gimmemotifs/cluster.py -> build/bdist.linux-armv7l/wheel/gimmemotifs 2023-09-13T22:54:18,137 creating build/bdist.linux-armv7l/wheel/data 2023-09-13T22:54:18,139 creating build/bdist.linux-armv7l/wheel/data/examples 2023-09-13T22:54:18,140 copying build/lib.linux-armv7l-cpython-311/data/examples/example.pfm -> build/bdist.linux-armv7l/wheel/data/examples 2023-09-13T22:54:18,142 copying build/lib.linux-armv7l-cpython-311/data/examples/Gm12878.CTCF.top500.w200.fa -> build/bdist.linux-armv7l/wheel/data/examples 2023-09-13T22:54:18,147 copying build/lib.linux-armv7l-cpython-311/data/examples/TAp73alpha.fa -> build/bdist.linux-armv7l/wheel/data/examples 2023-09-13T22:54:18,155 copying build/lib.linux-armv7l-cpython-311/data/examples/TAp73alpha.bed -> build/bdist.linux-armv7l/wheel/data/examples 2023-09-13T22:54:18,158 copying build/lib.linux-armv7l-cpython-311/data/examples/MA0099.3.jaspar -> build/bdist.linux-armv7l/wheel/data/examples 2023-09-13T22:54:18,160 copying build/lib.linux-armv7l-cpython-311/data/examples/test.small.fa -> build/bdist.linux-armv7l/wheel/data/examples 2023-09-13T22:54:18,162 copying build/lib.linux-armv7l-cpython-311/data/__init__.py -> build/bdist.linux-armv7l/wheel/data 2023-09-13T22:54:18,165 creating build/bdist.linux-armv7l/wheel/data/bg 2023-09-13T22:54:18,166 copying build/lib.linux-armv7l-cpython-311/data/bg/xenTro2.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-09-13T22:54:18,169 copying build/lib.linux-armv7l-cpython-311/data/bg/hg19.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-09-13T22:54:18,171 copying build/lib.linux-armv7l-cpython-311/data/bg/hg18.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-09-13T22:54:18,173 copying build/lib.linux-armv7l-cpython-311/data/bg/hg38.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-09-13T22:54:18,176 copying build/lib.linux-armv7l-cpython-311/data/bg/mm9.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-09-13T22:54:18,178 copying build/lib.linux-armv7l-cpython-311/data/bg/mm10.MotifSampler.bg -> build/bdist.linux-armv7l/wheel/data/bg 2023-09-13T22:54:18,180 copying build/lib.linux-armv7l-cpython-311/data/test.develop.out -> build/bdist.linux-armv7l/wheel/data 2023-09-13T22:54:18,183 creating build/bdist.linux-armv7l/wheel/data/templates 2023-09-13T22:54:18,184 copying build/lib.linux-armv7l-cpython-311/data/templates/star_silver.png -> build/bdist.linux-armv7l/wheel/data/templates 2023-09-13T22:54:18,188 copying build/lib.linux-armv7l-cpython-311/data/templates/table.tpl -> build/bdist.linux-armv7l/wheel/data/templates 2023-09-13T22:54:18,190 copying build/lib.linux-armv7l-cpython-311/data/templates/report_template.jinja.html -> build/bdist.linux-armv7l/wheel/data/templates 2023-09-13T22:54:18,193 creating build/bdist.linux-armv7l/wheel/data/templates/sortable 2023-09-13T22:54:18,195 copying build/lib.linux-armv7l-cpython-311/data/templates/sortable/sortable.min.js -> build/bdist.linux-armv7l/wheel/data/templates/sortable 2023-09-13T22:54:18,197 copying build/lib.linux-armv7l-cpython-311/data/templates/sortable/sortable-theme-slick.css -> build/bdist.linux-armv7l/wheel/data/templates/sortable 2023-09-13T22:54:18,200 copying build/lib.linux-armv7l-cpython-311/data/templates/star.png -> build/bdist.linux-armv7l/wheel/data/templates 2023-09-13T22:54:18,203 copying build/lib.linux-armv7l-cpython-311/data/templates/cluster_template.jinja.html -> build/bdist.linux-armv7l/wheel/data/templates 2023-09-13T22:54:18,206 creating build/bdist.linux-armv7l/wheel/data/score_dists 2023-09-13T22:54:18,207 copying build/lib.linux-armv7l-cpython-311/data/score_dists/dic2_mean_sd.txt -> build/bdist.linux-armv7l/wheel/data/score_dists 2023-09-13T22:54:18,210 copying build/lib.linux-armv7l-cpython-311/data/score_dists/dic2_bg_mean_sd.txt -> build/bdist.linux-armv7l/wheel/data/score_dists 2023-09-13T22:54:18,212 copying build/lib.linux-armv7l-cpython-311/data/score_dists/total_wic_mean_score_dist.txt -> build/bdist.linux-armv7l/wheel/data/score_dists 2023-09-13T22:54:18,216 creating build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,217 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_fungi.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,220 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/CIS-BP.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,277 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/IMAGE.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,281 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/ENCODE.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,285 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_plants.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,292 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_fungi.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,296 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_plants.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,301 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv11_MOUSE.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,309 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_insects.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,313 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.invertebrate.v1.0.pwm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,320 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/RSAT_insects.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,321 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_nematodes.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,324 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_vertebrates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,327 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_fungi.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,330 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.vertebrate.v3.1.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,333 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.vertebrate.v3.1.factor2motifs.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,336 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_vertebrates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,344 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOMER.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,348 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv11_MOUSE.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,351 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_urochordates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,353 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,356 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.vertebrate.v5.0.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,378 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv10_HUMAN.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,381 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,384 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_insects.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,385 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.plant.v1.0.pwm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,389 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/RSAT_plants.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,391 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_insects.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,393 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv10_MOUSE.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,401 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/RSAT_plants.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,405 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_nematodes.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,408 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOMER.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,411 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv11_HUMAN.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,422 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/SwissRegulon.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,425 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_urochordates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,427 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/CIS-BP.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,450 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_plants.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,453 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_fungi.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,455 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_urochordates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,457 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv10_MOUSE.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,460 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_vertebrates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,467 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/RSAT_insects.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,473 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/factorbook.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,480 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/factorbook.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,482 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,493 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020_nematodes.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,495 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_plants.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,498 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/ENCODE.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,517 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/RSAT_vertebrates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,520 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv11_HUMAN.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,522 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.vertebrate.v5.0.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,530 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_urochordates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,532 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/RSAT_vertebrates.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,550 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_nematodes.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,552 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/HOCOMOCOv10_HUMAN.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,561 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/gimme.vertebrate.v3.1.pwm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,571 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2020.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,586 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_vertebrates.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,588 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/JASPAR2018_insects.motif2factors.txt -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,591 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/IMAGE.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,606 copying build/lib.linux-armv7l-cpython-311/data/motif_databases/SwissRegulon.pfm -> build/bdist.linux-armv7l/wheel/data/motif_databases 2023-09-13T22:54:18,613 creating build/bdist.linux-armv7l/wheel/data/cfg 2023-09-13T22:54:18,614 copying build/lib.linux-armv7l-cpython-311/data/cfg/gimmemotifs.default.cfg -> build/bdist.linux-armv7l/wheel/data/cfg 2023-09-13T22:54:18,616 running install_egg_info 2023-09-13T22:54:18,645 Copying gimmemotifs.egg-info to build/bdist.linux-armv7l/wheel/gimmemotifs-0.16.0-py3.11.egg-info 2023-09-13T22:54:18,656 running install_scripts 2023-09-13T22:54:18,657 creating build/bdist.linux-armv7l/wheel/gimmemotifs-0.16.0.data 2023-09-13T22:54:18,658 creating build/bdist.linux-armv7l/wheel/gimmemotifs-0.16.0.data/scripts 2023-09-13T22:54:18,658 copying build/scripts-3.11/combine_peaks -> build/bdist.linux-armv7l/wheel/gimmemotifs-0.16.0.data/scripts 2023-09-13T22:54:18,660 copying build/scripts-3.11/gimme -> build/bdist.linux-armv7l/wheel/gimmemotifs-0.16.0.data/scripts 2023-09-13T22:54:18,662 copying build/scripts-3.11/coverage_table -> build/bdist.linux-armv7l/wheel/gimmemotifs-0.16.0.data/scripts 2023-09-13T22:54:18,663 changing mode of build/bdist.linux-armv7l/wheel/gimmemotifs-0.16.0.data/scripts/combine_peaks to 755 2023-09-13T22:54:18,664 changing mode of build/bdist.linux-armv7l/wheel/gimmemotifs-0.16.0.data/scripts/gimme to 755 2023-09-13T22:54:18,664 changing mode of build/bdist.linux-armv7l/wheel/gimmemotifs-0.16.0.data/scripts/coverage_table to 755 2023-09-13T22:54:18,721 creating build/bdist.linux-armv7l/wheel/gimmemotifs-0.16.0.dist-info/WHEEL 2023-09-13T22:54:18,724 creating '/tmp/pip-wheel-_arrgxbh/gimmemotifs-0.16.0-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-13T22:54:18,726 adding 'data/__init__.py' 2023-09-13T22:54:18,727 adding 'data/test.develop.out' 2023-09-13T22:54:18,729 adding 'data/bg/hg18.MotifSampler.bg' 2023-09-13T22:54:18,731 adding 'data/bg/hg19.MotifSampler.bg' 2023-09-13T22:54:18,732 adding 'data/bg/hg38.MotifSampler.bg' 2023-09-13T22:54:18,734 adding 'data/bg/mm10.MotifSampler.bg' 2023-09-13T22:54:18,735 adding 'data/bg/mm9.MotifSampler.bg' 2023-09-13T22:54:18,737 adding 'data/bg/xenTro2.MotifSampler.bg' 2023-09-13T22:54:18,738 adding 'data/cfg/gimmemotifs.default.cfg' 2023-09-13T22:54:18,792 adding 'data/examples/Gm12878.CTCF.top500.w200.fa' 2023-09-13T22:54:18,794 adding 'data/examples/MA0099.3.jaspar' 2023-09-13T22:54:18,798 adding 'data/examples/TAp73alpha.bed' 2023-09-13T22:54:18,906 adding 'data/examples/TAp73alpha.fa' 2023-09-13T22:54:18,909 adding 'data/examples/example.pfm' 2023-09-13T22:54:18,910 adding 'data/examples/test.small.fa' 2023-09-13T22:54:18,952 adding 'data/motif_databases/CIS-BP.motif2factors.txt' 2023-09-13T22:54:19,749 adding 'data/motif_databases/CIS-BP.pfm' 2023-09-13T22:54:19,790 adding 'data/motif_databases/ENCODE.motif2factors.txt' 2023-09-13T22:54:19,996 adding 'data/motif_databases/ENCODE.pfm' 2023-09-13T22:54:20,008 adding 'data/motif_databases/HOCOMOCOv10_HUMAN.motif2factors.txt' 2023-09-13T22:54:20,100 adding 'data/motif_databases/HOCOMOCOv10_HUMAN.pfm' 2023-09-13T22:54:20,105 adding 'data/motif_databases/HOCOMOCOv10_MOUSE.motif2factors.txt' 2023-09-13T22:54:20,167 adding 'data/motif_databases/HOCOMOCOv10_MOUSE.pfm' 2023-09-13T22:54:20,172 adding 'data/motif_databases/HOCOMOCOv11_HUMAN.motif2factors.txt' 2023-09-13T22:54:20,210 adding 'data/motif_databases/HOCOMOCOv11_HUMAN.pfm' 2023-09-13T22:54:20,214 adding 'data/motif_databases/HOCOMOCOv11_MOUSE.motif2factors.txt' 2023-09-13T22:54:20,245 adding 'data/motif_databases/HOCOMOCOv11_MOUSE.pfm' 2023-09-13T22:54:20,250 adding 'data/motif_databases/HOMER.motif2factors.txt' 2023-09-13T22:54:20,280 adding 'data/motif_databases/HOMER.pfm' 2023-09-13T22:54:20,286 adding 'data/motif_databases/IMAGE.motif2factors.txt' 2023-09-13T22:54:20,457 adding 'data/motif_databases/IMAGE.pfm' 2023-09-13T22:54:20,471 adding 'data/motif_databases/JASPAR2018.motif2factors.txt' 2023-09-13T22:54:20,577 adding 'data/motif_databases/JASPAR2018.pfm' 2023-09-13T22:54:20,582 adding 'data/motif_databases/JASPAR2018_fungi.motif2factors.txt' 2023-09-13T22:54:20,592 adding 'data/motif_databases/JASPAR2018_fungi.pfm' 2023-09-13T22:54:20,594 adding 'data/motif_databases/JASPAR2018_insects.motif2factors.txt' 2023-09-13T22:54:20,600 adding 'data/motif_databases/JASPAR2018_insects.pfm' 2023-09-13T22:54:20,601 adding 'data/motif_databases/JASPAR2018_nematodes.motif2factors.txt' 2023-09-13T22:54:20,603 adding 'data/motif_databases/JASPAR2018_nematodes.pfm' 2023-09-13T22:54:20,606 adding 'data/motif_databases/JASPAR2018_plants.motif2factors.txt' 2023-09-13T22:54:20,646 adding 'data/motif_databases/JASPAR2018_plants.pfm' 2023-09-13T22:54:20,648 adding 'data/motif_databases/JASPAR2018_urochordates.motif2factors.txt' 2023-09-13T22:54:20,650 adding 'data/motif_databases/JASPAR2018_urochordates.pfm' 2023-09-13T22:54:20,653 adding 'data/motif_databases/JASPAR2018_vertebrates.motif2factors.txt' 2023-09-13T22:54:20,701 adding 'data/motif_databases/JASPAR2018_vertebrates.pfm' 2023-09-13T22:54:20,714 adding 'data/motif_databases/JASPAR2020.motif2factors.txt' 2023-09-13T22:54:20,881 adding 'data/motif_databases/JASPAR2020.pfm' 2023-09-13T22:54:20,890 adding 'data/motif_databases/JASPAR2020_fungi.motif2factors.txt' 2023-09-13T22:54:20,903 adding 'data/motif_databases/JASPAR2020_fungi.pfm' 2023-09-13T22:54:20,905 adding 'data/motif_databases/JASPAR2020_insects.motif2factors.txt' 2023-09-13T22:54:20,912 adding 'data/motif_databases/JASPAR2020_insects.pfm' 2023-09-13T22:54:20,913 adding 'data/motif_databases/JASPAR2020_nematodes.motif2factors.txt' 2023-09-13T22:54:20,917 adding 'data/motif_databases/JASPAR2020_nematodes.pfm' 2023-09-13T22:54:20,920 adding 'data/motif_databases/JASPAR2020_plants.motif2factors.txt' 2023-09-13T22:54:20,973 adding 'data/motif_databases/JASPAR2020_plants.pfm' 2023-09-13T22:54:20,976 adding 'data/motif_databases/JASPAR2020_urochordates.motif2factors.txt' 2023-09-13T22:54:20,977 adding 'data/motif_databases/JASPAR2020_urochordates.pfm' 2023-09-13T22:54:20,982 adding 'data/motif_databases/JASPAR2020_vertebrates.motif2factors.txt' 2023-09-13T22:54:21,071 adding 'data/motif_databases/JASPAR2020_vertebrates.pfm' 2023-09-13T22:54:21,075 adding 'data/motif_databases/RSAT_insects.motif2factors.txt' 2023-09-13T22:54:21,100 adding 'data/motif_databases/RSAT_insects.pfm' 2023-09-13T22:54:21,102 adding 'data/motif_databases/RSAT_plants.motif2factors.txt' 2023-09-13T22:54:21,133 adding 'data/motif_databases/RSAT_plants.pfm' 2023-09-13T22:54:21,136 adding 'data/motif_databases/RSAT_vertebrates.motif2factors.txt' 2023-09-13T22:54:21,340 adding 'data/motif_databases/RSAT_vertebrates.pfm' 2023-09-13T22:54:21,350 adding 'data/motif_databases/SwissRegulon.motif2factors.txt' 2023-09-13T22:54:21,411 adding 'data/motif_databases/SwissRegulon.pfm' 2023-09-13T22:54:21,415 adding 'data/motif_databases/factorbook.motif2factors.txt' 2023-09-13T22:54:21,447 adding 'data/motif_databases/factorbook.pfm' 2023-09-13T22:54:21,480 adding 'data/motif_databases/gimme.invertebrate.v1.0.pwm' 2023-09-13T22:54:21,499 adding 'data/motif_databases/gimme.plant.v1.0.pwm' 2023-09-13T22:54:21,504 adding 'data/motif_databases/gimme.vertebrate.v3.1.factor2motifs.txt' 2023-09-13T22:54:21,508 adding 'data/motif_databases/gimme.vertebrate.v3.1.motif2factors.txt' 2023-09-13T22:54:21,612 adding 'data/motif_databases/gimme.vertebrate.v3.1.pwm' 2023-09-13T22:54:21,644 adding 'data/motif_databases/gimme.vertebrate.v5.0.motif2factors.txt' 2023-09-13T22:54:21,808 adding 'data/motif_databases/gimme.vertebrate.v5.0.pfm' 2023-09-13T22:54:21,817 adding 'data/score_dists/dic2_bg_mean_sd.txt' 2023-09-13T22:54:21,819 adding 'data/score_dists/dic2_mean_sd.txt' 2023-09-13T22:54:21,821 adding 'data/score_dists/total_wic_mean_score_dist.txt' 2023-09-13T22:54:21,823 adding 'data/templates/cluster_template.jinja.html' 2023-09-13T22:54:21,825 adding 'data/templates/report_template.jinja.html' 2023-09-13T22:54:21,827 adding 'data/templates/star.png' 2023-09-13T22:54:21,829 adding 'data/templates/star_silver.png' 2023-09-13T22:54:21,830 adding 'data/templates/table.tpl' 2023-09-13T22:54:21,832 adding 'data/templates/sortable/sortable-theme-slick.css' 2023-09-13T22:54:21,834 adding 'data/templates/sortable/sortable.min.js' 2023-09-13T22:54:21,836 adding 'gimmemotifs/__init__.py' 2023-09-13T22:54:21,837 adding 'gimmemotifs/_version.py' 2023-09-13T22:54:21,840 adding 'gimmemotifs/background.py' 2023-09-13T22:54:21,843 adding 'gimmemotifs/c_metrics.c' 2023-09-13T22:54:21,853 adding 'gimmemotifs/c_metrics.cpython-311-arm-linux-gnueabihf.so' 2023-09-13T22:54:21,856 adding 'gimmemotifs/cli.py' 2023-09-13T22:54:21,858 adding 'gimmemotifs/cluster.py' 2023-09-13T22:54:21,864 adding 'gimmemotifs/comparison.py' 2023-09-13T22:54:21,866 adding 'gimmemotifs/config.py' 2023-09-13T22:54:21,868 adding 'gimmemotifs/cpp_metrics.cpp' 2023-09-13T22:54:21,870 adding 'gimmemotifs/denovo.py' 2023-09-13T22:54:21,872 adding 'gimmemotifs/fasta.py' 2023-09-13T22:54:21,876 adding 'gimmemotifs/maelstrom.py' 2023-09-13T22:54:21,878 adding 'gimmemotifs/moap.py' 2023-09-13T22:54:21,884 adding 'gimmemotifs/motif.py' 2023-09-13T22:54:21,888 adding 'gimmemotifs/orthologs.py' 2023-09-13T22:54:21,890 adding 'gimmemotifs/plot.py' 2023-09-13T22:54:21,892 adding 'gimmemotifs/prediction.py' 2023-09-13T22:54:21,894 adding 'gimmemotifs/preprocessing.py' 2023-09-13T22:54:21,895 adding 'gimmemotifs/rank.py' 2023-09-13T22:54:21,899 adding 'gimmemotifs/report.py' 2023-09-13T22:54:21,901 adding 'gimmemotifs/rocmetrics.py' 2023-09-13T22:54:21,906 adding 'gimmemotifs/scanner.py' 2023-09-13T22:54:21,908 adding 'gimmemotifs/shutils.py' 2023-09-13T22:54:21,910 adding 'gimmemotifs/stats.py' 2023-09-13T22:54:21,913 adding 'gimmemotifs/utils.fix.py' 2023-09-13T22:54:21,916 adding 'gimmemotifs/utils.py' 2023-09-13T22:54:21,917 adding 'gimmemotifs/validation.py' 2023-09-13T22:54:21,919 adding 'gimmemotifs/commands/__init__.py' 2023-09-13T22:54:21,920 adding 'gimmemotifs/commands/background.py' 2023-09-13T22:54:21,921 adding 'gimmemotifs/commands/cluster.py' 2023-09-13T22:54:21,923 adding 'gimmemotifs/commands/diff.py' 2023-09-13T22:54:21,924 adding 'gimmemotifs/commands/location.py' 2023-09-13T22:54:21,925 adding 'gimmemotifs/commands/logo.py' 2023-09-13T22:54:21,926 adding 'gimmemotifs/commands/maelstrom.py' 2023-09-13T22:54:21,927 adding 'gimmemotifs/commands/match.py' 2023-09-13T22:54:21,929 adding 'gimmemotifs/commands/motif2factors.py' 2023-09-13T22:54:21,931 adding 'gimmemotifs/commands/motifs.py' 2023-09-13T22:54:21,932 adding 'gimmemotifs/commands/pfmscan.py' 2023-09-13T22:54:21,933 adding 'gimmemotifs/commands/prediction.py' 2023-09-13T22:54:21,934 adding 'gimmemotifs/commands/threshold.py' 2023-09-13T22:54:21,937 adding 'gimmemotifs/db/__init__.py' 2023-09-13T22:54:21,951 adding 'gimmemotifs/included_tools/AMD.bin' 2023-09-13T22:54:21,961 adding 'gimmemotifs/included_tools/BioProspector' 2023-09-13T22:54:22,212 adding 'gimmemotifs/included_tools/CreateBackgroundModel' 2023-09-13T22:54:22,232 adding 'gimmemotifs/included_tools/MDmodule' 2023-09-13T22:54:22,518 adding 'gimmemotifs/included_tools/MotifSampler' 2023-09-13T22:54:22,533 adding 'gimmemotifs/included_tools/__init__.py' 2023-09-13T22:54:22,597 adding 'gimmemotifs/included_tools/ameme' 2023-09-13T22:54:22,605 adding 'gimmemotifs/included_tools/clusterwd' 2023-09-13T22:54:22,610 adding 'gimmemotifs/included_tools/posmo' 2023-09-13T22:54:22,612 adding 'gimmemotifs/included_tools/ChIPMunk/ChIPMunk.sh' 2023-09-13T22:54:23,164 adding 'gimmemotifs/included_tools/ChIPMunk/chipmunk.jar' 2023-09-13T22:54:23,218 adding 'gimmemotifs/included_tools/HMS/hms' 2023-09-13T22:54:23,220 adding 'gimmemotifs/included_tools/HMS/theta0.txt' 2023-09-13T22:54:23,221 adding 'gimmemotifs/included_tools/HMS/theta1.txt' 2023-09-13T22:54:23,222 adding 'gimmemotifs/included_tools/HMS/theta2.txt' 2023-09-13T22:54:23,224 adding 'gimmemotifs/included_tools/HMS/theta3.txt' 2023-09-13T22:54:23,226 adding 'gimmemotifs/tools/__init__.py' 2023-09-13T22:54:23,227 adding 'gimmemotifs/tools/amd.py' 2023-09-13T22:54:23,228 adding 'gimmemotifs/tools/bioprospector.py' 2023-09-13T22:54:23,230 adding 'gimmemotifs/tools/chipmunk.py' 2023-09-13T22:54:23,231 adding 'gimmemotifs/tools/dinamo.py' 2023-09-13T22:54:23,233 adding 'gimmemotifs/tools/dreme.py' 2023-09-13T22:54:23,234 adding 'gimmemotifs/tools/gadem.py' 2023-09-13T22:54:23,235 adding 'gimmemotifs/tools/hms.py' 2023-09-13T22:54:23,237 adding 'gimmemotifs/tools/homer.py' 2023-09-13T22:54:23,238 adding 'gimmemotifs/tools/improbizer.py' 2023-09-13T22:54:23,239 adding 'gimmemotifs/tools/jaspar.py' 2023-09-13T22:54:23,241 adding 'gimmemotifs/tools/mdmodule.py' 2023-09-13T22:54:23,242 adding 'gimmemotifs/tools/meme.py' 2023-09-13T22:54:23,243 adding 'gimmemotifs/tools/memew.py' 2023-09-13T22:54:23,244 adding 'gimmemotifs/tools/motifprogram.py' 2023-09-13T22:54:23,246 adding 'gimmemotifs/tools/motifsampler.py' 2023-09-13T22:54:23,247 adding 'gimmemotifs/tools/posmo.py' 2023-09-13T22:54:23,248 adding 'gimmemotifs/tools/prosampler.py' 2023-09-13T22:54:23,249 adding 'gimmemotifs/tools/rpmcmc.py' 2023-09-13T22:54:23,251 adding 'gimmemotifs/tools/trawler.py' 2023-09-13T22:54:23,252 adding 'gimmemotifs/tools/weeder.py' 2023-09-13T22:54:23,253 adding 'gimmemotifs/tools/xxmotif.py' 2023-09-13T22:54:23,254 adding 'gimmemotifs/tools/yamda.py' 2023-09-13T22:54:23,256 adding 'gimmemotifs-0.16.0.data/scripts/combine_peaks' 2023-09-13T22:54:23,258 adding 'gimmemotifs-0.16.0.data/scripts/coverage_table' 2023-09-13T22:54:23,259 adding 'gimmemotifs-0.16.0.data/scripts/gimme' 2023-09-13T22:54:23,261 adding 'gimmemotifs-0.16.0.dist-info/COPYING' 2023-09-13T22:54:23,262 adding 'gimmemotifs-0.16.0.dist-info/METADATA' 2023-09-13T22:54:23,263 adding 'gimmemotifs-0.16.0.dist-info/WHEEL' 2023-09-13T22:54:23,264 adding 'gimmemotifs-0.16.0.dist-info/top_level.txt' 2023-09-13T22:54:23,267 adding 'gimmemotifs-0.16.0.dist-info/RECORD' 2023-09-13T22:54:23,379 removing build/bdist.linux-armv7l/wheel 2023-09-13T22:54:23,572 Building wheel for gimmemotifs (setup.py): finished with status 'done' 2023-09-13T22:54:23,693 Created wheel for gimmemotifs: filename=gimmemotifs-0.16.0-cp311-cp311-linux_armv7l.whl size=10188025 sha256=d8ad0b8ec9c3270ba9062fa3f50c42ad755bf3c79d0a14357139ce7389165aee 2023-09-13T22:54:23,694 Stored in directory: /tmp/pip-ephem-wheel-cache-k268ndib/wheels/22/4f/eb/ffaefb9791c0e9f28c50bd7a4299e23751a3259139371d11ec 2023-09-13T22:54:23,713 Successfully built gimmemotifs 2023-09-13T22:54:23,957 Removed build tracker: '/tmp/pip-build-tracker-4xgm07a1'