2023-09-14T03:41:39,784 Created temporary directory: /tmp/pip-build-tracker-wiqfdkgr 2023-09-14T03:41:39,785 Initialized build tracking at /tmp/pip-build-tracker-wiqfdkgr 2023-09-14T03:41:39,786 Created build tracker: /tmp/pip-build-tracker-wiqfdkgr 2023-09-14T03:41:39,786 Entered build tracker: /tmp/pip-build-tracker-wiqfdkgr 2023-09-14T03:41:39,787 Created temporary directory: /tmp/pip-wheel-o3u3u_l0 2023-09-14T03:41:39,790 Created temporary directory: /tmp/pip-ephem-wheel-cache-_bli1wwa 2023-09-14T03:41:39,812 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-14T03:41:39,815 2 location(s) to search for versions of glycopeptidepy: 2023-09-14T03:41:39,815 * https://pypi.org/simple/glycopeptidepy/ 2023-09-14T03:41:39,815 * https://www.piwheels.org/simple/glycopeptidepy/ 2023-09-14T03:41:39,816 Fetching project page and analyzing links: https://pypi.org/simple/glycopeptidepy/ 2023-09-14T03:41:39,817 Getting page https://pypi.org/simple/glycopeptidepy/ 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https://pypi.org/simple/glycopeptidepy/ 2023-09-14T03:41:40,505 Given no hashes to check 1 links for project 'glycopeptidepy': discarding no candidates 2023-09-14T03:41:40,523 Collecting glycopeptidepy==0.0.9 2023-09-14T03:41:40,525 Created temporary directory: /tmp/pip-unpack-xmta6o0l 2023-09-14T03:41:41,442 Downloading glycopeptidepy-0.0.9.tar.gz (1.3 MB) 2023-09-14T03:41:42,279 Added glycopeptidepy==0.0.9 from https://files.pythonhosted.org/packages/e1/2c/c4fb4ba198007046e66a5cc18ee1db01e46e453feb59a4149f8c590e550c/glycopeptidepy-0.0.9.tar.gz to build tracker '/tmp/pip-build-tracker-wiqfdkgr' 2023-09-14T03:41:42,285 Created temporary directory: /tmp/pip-build-env-kde1zcc6 2023-09-14T03:41:42,289 Installing build dependencies: started 2023-09-14T03:41:42,291 Running command pip subprocess to install build dependencies 2023-09-14T03:41:43,464 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-14T03:41:43,982 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-14T03:41:45,646 Collecting setuptools 2023-09-14T03:41:45,647 Obtaining dependency information for setuptools from https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl.metadata 2023-09-14T03:41:45,653 Using cached setuptools-68.2.2-py3-none-any.whl.metadata (6.3 kB) 2023-09-14T03:41:45,860 Collecting wheel 2023-09-14T03:41:45,877 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-09-14T03:41:47,253 Collecting Cython 2023-09-14T03:41:47,254 Obtaining dependency information for Cython from https://files.pythonhosted.org/packages/03/e9/9cc0c4f0d8a566089d096254cd25168a0db02dd047863a7f995d8d3eefa7/Cython-3.0.2-py2.py3-none-any.whl.metadata 2023-09-14T03:41:47,259 Using cached Cython-3.0.2-py2.py3-none-any.whl.metadata (3.1 kB) 2023-09-14T03:41:47,514 Collecting glypy 2023-09-14T03:41:47,526 Downloading https://www.piwheels.org/simple/glypy/glypy-1.0.2-cp311-cp311-linux_armv7l.whl (1.7 MB) 2023-09-14T03:41:47,718 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.7/1.7 MB 9.4 MB/s eta 0:00:00 2023-09-14T03:41:48,101 Collecting hjson (from glypy) 2023-09-14T03:41:48,114 Downloading https://www.piwheels.org/simple/hjson/hjson-3.1.0-py3-none-any.whl (54 kB) 2023-09-14T03:41:48,130 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 54.0/54.0 kB 5.3 MB/s eta 0:00:00 2023-09-14T03:41:48,228 Collecting six (from glypy) 2023-09-14T03:41:48,242 Using cached https://www.piwheels.org/simple/six/six-1.16.0-py2.py3-none-any.whl (11 kB) 2023-09-14T03:41:48,273 Using cached setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-09-14T03:41:48,314 Using cached Cython-3.0.2-py2.py3-none-any.whl (1.2 MB) 2023-09-14T03:41:50,839 Installing collected packages: hjson, wheel, six, setuptools, Cython, glypy 2023-09-14T03:41:51,077 Creating /tmp/pip-build-env-kde1zcc6/overlay/local/bin 2023-09-14T03:41:51,079 changing mode of /tmp/pip-build-env-kde1zcc6/overlay/local/bin/hjson to 755 2023-09-14T03:41:51,311 changing mode of /tmp/pip-build-env-kde1zcc6/overlay/local/bin/wheel to 755 2023-09-14T03:41:56,386 changing mode of /tmp/pip-build-env-kde1zcc6/overlay/local/bin/cygdb to 755 2023-09-14T03:41:56,389 changing mode of /tmp/pip-build-env-kde1zcc6/overlay/local/bin/cython to 755 2023-09-14T03:41:56,390 changing mode of /tmp/pip-build-env-kde1zcc6/overlay/local/bin/cythonize to 755 2023-09-14T03:41:57,700 Successfully installed Cython-3.0.2 glypy-1.0.2 hjson-3.1.0 setuptools-68.2.2 six-1.16.0 wheel-0.41.2 2023-09-14T03:41:58,327 Installing build dependencies: finished with status 'done' 2023-09-14T03:41:58,343 Getting requirements to build wheel: started 2023-09-14T03:41:58,344 Running command Getting requirements to build wheel 2023-09-14T03:42:03,364 /tmp/pip-build-env-kde1zcc6/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o3u3u_l0/glycopeptidepy_ada3a2d0d94247c2868623e1d2b03b1b/glycopeptidepy/_c/algorithm.pyx 2023-09-14T03:42:03,364 tree = Parsing.p_module(s, pxd, full_module_name) 2023-09-14T03:42:04,249 /tmp/pip-build-env-kde1zcc6/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o3u3u_l0/glycopeptidepy_ada3a2d0d94247c2868623e1d2b03b1b/glycopeptidepy/_c/collectiontools.pxd 2023-09-14T03:42:04,249 tree = Parsing.p_module(s, pxd, full_module_name) 2023-09-14T03:42:06,147 /tmp/pip-build-env-kde1zcc6/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o3u3u_l0/glycopeptidepy_ada3a2d0d94247c2868623e1d2b03b1b/glycopeptidepy/_c/count_table.pxd 2023-09-14T03:42:06,148 tree = Parsing.p_module(s, pxd, full_module_name) 2023-09-14T03:42:07,634 warning: glycopeptidepy/_c/count_table.pyx:15:0: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310 2023-09-14T03:42:07,651 warning: glycopeptidepy/_c/count_table.pyx:102:0: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 2023-09-14T03:42:07,671 warning: glycopeptidepy/_c/count_table.pyx:184:8: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 2023-09-14T03:42:07,673 warning: glycopeptidepy/_c/count_table.pyx:195:8: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 2023-09-14T03:42:07,847 Error compiling Cython file: 2023-09-14T03:42:07,847 ------------------------------------------------------------ 2023-09-14T03:42:07,848 ... 2023-09-14T03:42:07,848 pytable[int(12)] = 11 2023-09-14T03:42:07,849 pytable[255.2] = 99 2023-09-14T03:42:07,849 assert len(pytable) == 2 2023-09-14T03:42:07,850 del pytable 2023-09-14T03:42:07,850 pytable = CountTable._create() 2023-09-14T03:42:07,851 print pytable 2023-09-14T03:42:07,851 ^ 2023-09-14T03:42:07,851 ------------------------------------------------------------ 2023-09-14T03:42:07,852 glycopeptidepy/_c/count_table.pyx:952:10: Syntax error in simple statement list 2023-09-14T03:42:07,931 Compiling glycopeptidepy/_c/collectiontools.pyx because it changed. 2023-09-14T03:42:07,932 Compiling glycopeptidepy/_c/count_table.pyx because it changed. 2023-09-14T03:42:07,932 Compiling glycopeptidepy/_c/parser.pyx because it changed. 2023-09-14T03:42:07,933 Compiling glycopeptidepy/_c/structure/base.pyx because it changed. 2023-09-14T03:42:07,934 Compiling glycopeptidepy/_c/structure/fragment.pyx because it changed. 2023-09-14T03:42:07,934 Compiling glycopeptidepy/_c/structure/constants.pyx because it changed. 2023-09-14T03:42:07,935 Compiling glycopeptidepy/_c/structure/glycan.pyx because it changed. 2023-09-14T03:42:07,936 Compiling glycopeptidepy/_c/structure/sequence_methods.pyx because it changed. 2023-09-14T03:42:07,936 Compiling glycopeptidepy/_c/structure/modification/rule.pyx because it changed. 2023-09-14T03:42:07,937 Compiling glycopeptidepy/_c/structure/modification/modification.pyx because it changed. 2023-09-14T03:42:07,937 Compiling glycopeptidepy/_c/structure/modification/source.pyx because it changed. 2023-09-14T03:42:07,938 Compiling glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx because it changed. 2023-09-14T03:42:07,938 Compiling glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx because it changed. 2023-09-14T03:42:07,939 Compiling glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx because it changed. 2023-09-14T03:42:07,939 Compiling glycopeptidepy/_c/algorithm.pyx because it changed. 2023-09-14T03:42:07,939 [ 1/15] Cythonizing glycopeptidepy/_c/algorithm.pyx 2023-09-14T03:42:07,940 [ 2/15] Cythonizing glycopeptidepy/_c/collectiontools.pyx 2023-09-14T03:42:07,941 [ 3/15] Cythonizing glycopeptidepy/_c/count_table.pyx 2023-09-14T03:42:07,941 running egg_info 2023-09-14T03:42:07,942 writing glycopeptidepy.egg-info/PKG-INFO 2023-09-14T03:42:07,945 writing dependency_links to glycopeptidepy.egg-info/dependency_links.txt 2023-09-14T03:42:07,947 writing requirements to glycopeptidepy.egg-info/requires.txt 2023-09-14T03:42:07,948 writing top-level names to glycopeptidepy.egg-info/top_level.txt 2023-09-14T03:42:07,988 reading manifest file 'glycopeptidepy.egg-info/SOURCES.txt' 2023-09-14T03:42:07,995 reading manifest template 'MANIFEST.in' 2023-09-14T03:42:07,997 warning: no files found matching '*.csv' under directory 'glycopeptidepy/structure/data' 2023-09-14T03:42:07,997 warning: no files found matching '*.json' under directory 'glycopeptidepy/structure/data' 2023-09-14T03:42:08,179 writing manifest file 'glycopeptidepy.egg-info/SOURCES.txt' 2023-09-14T03:42:08,181 *************************************************************************** 2023-09-14T03:42:08,182 WARNING: The C extension could not be compiled, speedups are not enabled. 2023-09-14T03:42:08,183 Plain-Python build succeeded. 2023-09-14T03:42:08,183 *************************************************************************** 2023-09-14T03:42:08,445 Getting requirements to build wheel: finished with status 'done' 2023-09-14T03:42:08,455 Created temporary directory: /tmp/pip-modern-metadata-y66630_4 2023-09-14T03:42:08,458 Preparing metadata (pyproject.toml): started 2023-09-14T03:42:08,459 Running command Preparing metadata (pyproject.toml) 2023-09-14T03:42:12,276 /tmp/pip-build-env-kde1zcc6/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o3u3u_l0/glycopeptidepy_ada3a2d0d94247c2868623e1d2b03b1b/glycopeptidepy/_c/count_table.pxd 2023-09-14T03:42:12,276 tree = Parsing.p_module(s, pxd, full_module_name) 2023-09-14T03:42:13,831 warning: glycopeptidepy/_c/count_table.pyx:15:0: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310 2023-09-14T03:42:13,849 warning: glycopeptidepy/_c/count_table.pyx:102:0: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 2023-09-14T03:42:13,870 warning: glycopeptidepy/_c/count_table.pyx:184:8: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 2023-09-14T03:42:13,873 warning: glycopeptidepy/_c/count_table.pyx:195:8: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 2023-09-14T03:42:14,055 Error compiling Cython file: 2023-09-14T03:42:14,055 ------------------------------------------------------------ 2023-09-14T03:42:14,056 ... 2023-09-14T03:42:14,056 pytable[int(12)] = 11 2023-09-14T03:42:14,057 pytable[255.2] = 99 2023-09-14T03:42:14,058 assert len(pytable) == 2 2023-09-14T03:42:14,058 del pytable 2023-09-14T03:42:14,059 pytable = CountTable._create() 2023-09-14T03:42:14,059 print pytable 2023-09-14T03:42:14,060 ^ 2023-09-14T03:42:14,060 ------------------------------------------------------------ 2023-09-14T03:42:14,061 glycopeptidepy/_c/count_table.pyx:952:10: Syntax error in simple statement list 2023-09-14T03:42:14,121 Compiling glycopeptidepy/_c/count_table.pyx because it changed. 2023-09-14T03:42:14,121 Compiling glycopeptidepy/_c/parser.pyx because it changed. 2023-09-14T03:42:14,122 Compiling glycopeptidepy/_c/structure/base.pyx because it changed. 2023-09-14T03:42:14,123 Compiling glycopeptidepy/_c/structure/fragment.pyx because it changed. 2023-09-14T03:42:14,123 Compiling glycopeptidepy/_c/structure/constants.pyx because it changed. 2023-09-14T03:42:14,124 Compiling glycopeptidepy/_c/structure/glycan.pyx because it changed. 2023-09-14T03:42:14,124 Compiling glycopeptidepy/_c/structure/sequence_methods.pyx because it changed. 2023-09-14T03:42:14,125 Compiling glycopeptidepy/_c/structure/modification/rule.pyx because it changed. 2023-09-14T03:42:14,125 Compiling glycopeptidepy/_c/structure/modification/modification.pyx because it changed. 2023-09-14T03:42:14,126 Compiling glycopeptidepy/_c/structure/modification/source.pyx because it changed. 2023-09-14T03:42:14,127 Compiling glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx because it changed. 2023-09-14T03:42:14,127 Compiling glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx because it changed. 2023-09-14T03:42:14,128 Compiling glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx because it changed. 2023-09-14T03:42:14,129 [ 1/13] Cythonizing glycopeptidepy/_c/count_table.pyx 2023-09-14T03:42:14,130 running dist_info 2023-09-14T03:42:14,161 creating /tmp/pip-modern-metadata-y66630_4/glycopeptidepy.egg-info 2023-09-14T03:42:14,166 writing /tmp/pip-modern-metadata-y66630_4/glycopeptidepy.egg-info/PKG-INFO 2023-09-14T03:42:14,171 writing dependency_links to /tmp/pip-modern-metadata-y66630_4/glycopeptidepy.egg-info/dependency_links.txt 2023-09-14T03:42:14,173 writing requirements to /tmp/pip-modern-metadata-y66630_4/glycopeptidepy.egg-info/requires.txt 2023-09-14T03:42:14,175 writing top-level names to /tmp/pip-modern-metadata-y66630_4/glycopeptidepy.egg-info/top_level.txt 2023-09-14T03:42:14,177 writing manifest file '/tmp/pip-modern-metadata-y66630_4/glycopeptidepy.egg-info/SOURCES.txt' 2023-09-14T03:42:14,208 reading manifest file '/tmp/pip-modern-metadata-y66630_4/glycopeptidepy.egg-info/SOURCES.txt' 2023-09-14T03:42:14,211 reading manifest template 'MANIFEST.in' 2023-09-14T03:42:14,212 warning: no files found matching '*.csv' under directory 'glycopeptidepy/structure/data' 2023-09-14T03:42:14,213 warning: no files found matching '*.json' under directory 'glycopeptidepy/structure/data' 2023-09-14T03:42:14,446 writing manifest file '/tmp/pip-modern-metadata-y66630_4/glycopeptidepy.egg-info/SOURCES.txt' 2023-09-14T03:42:14,448 creating '/tmp/pip-modern-metadata-y66630_4/glycopeptidepy-0.0.9.dist-info' 2023-09-14T03:42:14,541 *************************************************************************** 2023-09-14T03:42:14,541 WARNING: The C extension could not be compiled, speedups are not enabled. 2023-09-14T03:42:14,542 Plain-Python build succeeded. 2023-09-14T03:42:14,543 *************************************************************************** 2023-09-14T03:42:14,814 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-14T03:42:14,819 Source in /tmp/pip-wheel-o3u3u_l0/glycopeptidepy_ada3a2d0d94247c2868623e1d2b03b1b has version 0.0.9, which satisfies requirement glycopeptidepy==0.0.9 from https://files.pythonhosted.org/packages/e1/2c/c4fb4ba198007046e66a5cc18ee1db01e46e453feb59a4149f8c590e550c/glycopeptidepy-0.0.9.tar.gz 2023-09-14T03:42:14,820 Removed glycopeptidepy==0.0.9 from https://files.pythonhosted.org/packages/e1/2c/c4fb4ba198007046e66a5cc18ee1db01e46e453feb59a4149f8c590e550c/glycopeptidepy-0.0.9.tar.gz from build tracker '/tmp/pip-build-tracker-wiqfdkgr' 2023-09-14T03:42:14,823 Created temporary directory: /tmp/pip-unpack-bwoen10q 2023-09-14T03:42:14,825 Created temporary directory: /tmp/pip-unpack-ei_h069j 2023-09-14T03:42:14,835 Building wheels for collected packages: glycopeptidepy 2023-09-14T03:42:14,839 Created temporary directory: /tmp/pip-wheel-n9iwejko 2023-09-14T03:42:14,840 Destination directory: /tmp/pip-wheel-n9iwejko 2023-09-14T03:42:14,842 Building wheel for glycopeptidepy (pyproject.toml): started 2023-09-14T03:42:14,843 Running command Building wheel for glycopeptidepy (pyproject.toml) 2023-09-14T03:42:18,612 /tmp/pip-build-env-kde1zcc6/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-o3u3u_l0/glycopeptidepy_ada3a2d0d94247c2868623e1d2b03b1b/glycopeptidepy/_c/count_table.pxd 2023-09-14T03:42:18,612 tree = Parsing.p_module(s, pxd, full_module_name) 2023-09-14T03:42:20,128 warning: glycopeptidepy/_c/count_table.pyx:15:0: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310 2023-09-14T03:42:20,146 warning: glycopeptidepy/_c/count_table.pyx:102:0: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 2023-09-14T03:42:20,166 warning: glycopeptidepy/_c/count_table.pyx:184:8: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 2023-09-14T03:42:20,168 warning: glycopeptidepy/_c/count_table.pyx:195:8: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 2023-09-14T03:42:20,346 Error compiling Cython file: 2023-09-14T03:42:20,347 ------------------------------------------------------------ 2023-09-14T03:42:20,347 ... 2023-09-14T03:42:20,348 pytable[int(12)] = 11 2023-09-14T03:42:20,348 pytable[255.2] = 99 2023-09-14T03:42:20,349 assert len(pytable) == 2 2023-09-14T03:42:20,350 del pytable 2023-09-14T03:42:20,350 pytable = CountTable._create() 2023-09-14T03:42:20,351 print pytable 2023-09-14T03:42:20,351 ^ 2023-09-14T03:42:20,351 ------------------------------------------------------------ 2023-09-14T03:42:20,353 glycopeptidepy/_c/count_table.pyx:952:10: Syntax error in simple statement list 2023-09-14T03:42:20,441 Compiling glycopeptidepy/_c/count_table.pyx because it changed. 2023-09-14T03:42:20,442 Compiling glycopeptidepy/_c/parser.pyx because it changed. 2023-09-14T03:42:20,442 Compiling glycopeptidepy/_c/structure/base.pyx because it changed. 2023-09-14T03:42:20,443 Compiling glycopeptidepy/_c/structure/fragment.pyx because it changed. 2023-09-14T03:42:20,444 Compiling glycopeptidepy/_c/structure/constants.pyx because it changed. 2023-09-14T03:42:20,444 Compiling glycopeptidepy/_c/structure/glycan.pyx because it changed. 2023-09-14T03:42:20,445 Compiling glycopeptidepy/_c/structure/sequence_methods.pyx because it changed. 2023-09-14T03:42:20,445 Compiling glycopeptidepy/_c/structure/modification/rule.pyx because it changed. 2023-09-14T03:42:20,446 Compiling glycopeptidepy/_c/structure/modification/modification.pyx because it changed. 2023-09-14T03:42:20,446 Compiling glycopeptidepy/_c/structure/modification/source.pyx because it changed. 2023-09-14T03:42:20,447 Compiling glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx because it changed. 2023-09-14T03:42:20,447 Compiling glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx because it changed. 2023-09-14T03:42:20,448 Compiling glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx because it changed. 2023-09-14T03:42:20,448 [ 1/13] Cythonizing glycopeptidepy/_c/count_table.pyx 2023-09-14T03:42:20,449 running bdist_wheel 2023-09-14T03:42:20,476 running build 2023-09-14T03:42:20,477 running build_py 2023-09-14T03:42:20,485 creating build 2023-09-14T03:42:20,485 creating build/lib 2023-09-14T03:42:20,486 creating build/lib/glycopeptidepy 2023-09-14T03:42:20,487 copying glycopeptidepy/enzyme.py -> build/lib/glycopeptidepy 2023-09-14T03:42:20,489 copying glycopeptidepy/algorithm.py -> build/lib/glycopeptidepy 2023-09-14T03:42:20,492 copying glycopeptidepy/version.py -> build/lib/glycopeptidepy 2023-09-14T03:42:20,493 copying glycopeptidepy/__init__.py -> build/lib/glycopeptidepy 2023-09-14T03:42:20,495 creating build/lib/glycopeptidepy/io 2023-09-14T03:42:20,496 copying glycopeptidepy/io/nextprot.py -> build/lib/glycopeptidepy/io 2023-09-14T03:42:20,498 copying glycopeptidepy/io/annotation.py -> build/lib/glycopeptidepy/io 2023-09-14T03:42:20,500 copying glycopeptidepy/io/uniprot.py -> build/lib/glycopeptidepy/io 2023-09-14T03:42:20,502 copying glycopeptidepy/io/utils.py -> build/lib/glycopeptidepy/io 2023-09-14T03:42:20,504 copying glycopeptidepy/io/__init__.py -> build/lib/glycopeptidepy/io 2023-09-14T03:42:20,505 copying glycopeptidepy/io/fasta.py -> build/lib/glycopeptidepy/io 2023-09-14T03:42:20,509 creating build/lib/glycopeptidepy/utils 2023-09-14T03:42:20,509 copying glycopeptidepy/utils/intervals.py -> build/lib/glycopeptidepy/utils 2023-09-14T03:42:20,512 copying glycopeptidepy/utils/sequence_tree.py -> build/lib/glycopeptidepy/utils 2023-09-14T03:42:20,514 copying glycopeptidepy/utils/collectiontools.py -> build/lib/glycopeptidepy/utils 2023-09-14T03:42:20,516 copying glycopeptidepy/utils/memoize.py -> build/lib/glycopeptidepy/utils 2023-09-14T03:42:20,518 copying glycopeptidepy/utils/__init__.py -> build/lib/glycopeptidepy/utils 2023-09-14T03:42:20,519 copying glycopeptidepy/utils/iterators.py -> build/lib/glycopeptidepy/utils 2023-09-14T03:42:20,521 creating build/lib/glycopeptidepy/_c 2023-09-14T03:42:20,522 copying glycopeptidepy/_c/cythonize.py -> build/lib/glycopeptidepy/_c 2023-09-14T03:42:20,524 copying glycopeptidepy/_c/__init__.py -> build/lib/glycopeptidepy/_c 2023-09-14T03:42:20,526 creating build/lib/glycopeptidepy/test 2023-09-14T03:42:20,527 copying glycopeptidepy/test/test_modification.py -> build/lib/glycopeptidepy/test 2023-09-14T03:42:20,529 copying glycopeptidepy/test/test_fragment.py -> build/lib/glycopeptidepy/test 2023-09-14T03:42:20,531 copying glycopeptidepy/test/test_fasta.py -> build/lib/glycopeptidepy/test 2023-09-14T03:42:20,533 copying glycopeptidepy/test/test_uniprot.py -> build/lib/glycopeptidepy/test 2023-09-14T03:42:20,535 copying glycopeptidepy/test/test_enzyme.py -> build/lib/glycopeptidepy/test 2023-09-14T03:42:20,536 copying glycopeptidepy/test/test_residue.py -> build/lib/glycopeptidepy/test 2023-09-14T03:42:20,538 copying glycopeptidepy/test/test_sequence.py -> build/lib/glycopeptidepy/test 2023-09-14T03:42:20,540 copying glycopeptidepy/test/test_intervals.py -> build/lib/glycopeptidepy/test 2023-09-14T03:42:20,542 copying glycopeptidepy/test/test_sequence_composition.py -> build/lib/glycopeptidepy/test 2023-09-14T03:42:20,543 copying glycopeptidepy/test/test_algorithms.py -> build/lib/glycopeptidepy/test 2023-09-14T03:42:20,545 copying glycopeptidepy/test/test_fragmentation_strategy.py -> build/lib/glycopeptidepy/test 2023-09-14T03:42:20,547 copying glycopeptidepy/test/test_utils.py -> build/lib/glycopeptidepy/test 2023-09-14T03:42:20,549 copying glycopeptidepy/test/common.py -> build/lib/glycopeptidepy/test 2023-09-14T03:42:20,550 copying glycopeptidepy/test/__init__.py -> build/lib/glycopeptidepy/test 2023-09-14T03:42:20,552 creating build/lib/glycopeptidepy/structure 2023-09-14T03:42:20,553 copying glycopeptidepy/structure/constants.py -> build/lib/glycopeptidepy/structure 2023-09-14T03:42:20,555 copying glycopeptidepy/structure/composition.py -> build/lib/glycopeptidepy/structure 2023-09-14T03:42:20,557 copying glycopeptidepy/structure/sequence_composition.py -> build/lib/glycopeptidepy/structure 2023-09-14T03:42:20,559 copying glycopeptidepy/structure/glycan.py -> build/lib/glycopeptidepy/structure 2023-09-14T03:42:20,561 copying glycopeptidepy/structure/terminal_group.py -> build/lib/glycopeptidepy/structure 2023-09-14T03:42:20,563 copying glycopeptidepy/structure/fragment.py -> build/lib/glycopeptidepy/structure 2023-09-14T03:42:20,565 copying glycopeptidepy/structure/parser.py -> build/lib/glycopeptidepy/structure 2023-09-14T03:42:20,567 copying glycopeptidepy/structure/base.py -> build/lib/glycopeptidepy/structure 2023-09-14T03:42:20,569 copying glycopeptidepy/structure/__init__.py -> build/lib/glycopeptidepy/structure 2023-09-14T03:42:20,570 copying glycopeptidepy/structure/residue.py -> build/lib/glycopeptidepy/structure 2023-09-14T03:42:20,573 creating build/lib/glycopeptidepy/io/cv 2023-09-14T03:42:20,574 copying glycopeptidepy/io/cv/peff.py -> build/lib/glycopeptidepy/io/cv 2023-09-14T03:42:20,576 copying glycopeptidepy/io/cv/__init__.py -> build/lib/glycopeptidepy/io/cv 2023-09-14T03:42:20,578 copying glycopeptidepy/io/cv/term.py -> build/lib/glycopeptidepy/io/cv 2023-09-14T03:42:20,580 copying glycopeptidepy/io/cv/uniprot_ptm.py -> build/lib/glycopeptidepy/io/cv 2023-09-14T03:42:20,582 creating build/lib/glycopeptidepy/_c/structure 2023-09-14T03:42:20,583 copying glycopeptidepy/_c/structure/__init__.py -> build/lib/glycopeptidepy/_c/structure 2023-09-14T03:42:20,584 creating build/lib/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:20,585 copying glycopeptidepy/_c/structure/modification/__init__.py -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:20,587 creating build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:20,588 copying glycopeptidepy/_c/structure/fragmentation_strategy/__init__.py -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:20,590 creating build/lib/glycopeptidepy/structure/modification 2023-09-14T03:42:20,591 copying glycopeptidepy/structure/modification/descriptors.py -> build/lib/glycopeptidepy/structure/modification 2023-09-14T03:42:20,593 copying glycopeptidepy/structure/modification/rule.py -> build/lib/glycopeptidepy/structure/modification 2023-09-14T03:42:20,596 copying glycopeptidepy/structure/modification/target.py -> build/lib/glycopeptidepy/structure/modification 2023-09-14T03:42:20,598 copying glycopeptidepy/structure/modification/source.py -> build/lib/glycopeptidepy/structure/modification 2023-09-14T03:42:20,601 copying glycopeptidepy/structure/modification/utils.py -> build/lib/glycopeptidepy/structure/modification 2023-09-14T03:42:20,603 copying glycopeptidepy/structure/modification/glycosylation.py -> build/lib/glycopeptidepy/structure/modification 2023-09-14T03:42:20,605 copying glycopeptidepy/structure/modification/__init__.py -> build/lib/glycopeptidepy/structure/modification 2023-09-14T03:42:20,607 copying glycopeptidepy/structure/modification/modification.py -> build/lib/glycopeptidepy/structure/modification 2023-09-14T03:42:20,610 creating build/lib/glycopeptidepy/structure/sequence 2023-09-14T03:42:20,611 copying glycopeptidepy/structure/sequence/mutable_sequence.py -> build/lib/glycopeptidepy/structure/sequence 2023-09-14T03:42:20,614 copying glycopeptidepy/structure/sequence/glycosylated_sequence.py -> build/lib/glycopeptidepy/structure/sequence 2023-09-14T03:42:20,616 copying glycopeptidepy/structure/sequence/implementation.py -> build/lib/glycopeptidepy/structure/sequence 2023-09-14T03:42:20,619 copying glycopeptidepy/structure/sequence/base.py -> build/lib/glycopeptidepy/structure/sequence 2023-09-14T03:42:20,621 copying glycopeptidepy/structure/sequence/__init__.py -> build/lib/glycopeptidepy/structure/sequence 2023-09-14T03:42:20,624 creating build/lib/glycopeptidepy/structure/fragmentation_strategy 2023-09-14T03:42:20,625 copying glycopeptidepy/structure/fragmentation_strategy/glycan.py -> build/lib/glycopeptidepy/structure/fragmentation_strategy 2023-09-14T03:42:20,629 copying glycopeptidepy/structure/fragmentation_strategy/peptide.py -> build/lib/glycopeptidepy/structure/fragmentation_strategy 2023-09-14T03:42:20,631 copying glycopeptidepy/structure/fragmentation_strategy/base.py -> build/lib/glycopeptidepy/structure/fragmentation_strategy 2023-09-14T03:42:20,633 copying glycopeptidepy/structure/fragmentation_strategy/__init__.py -> build/lib/glycopeptidepy/structure/fragmentation_strategy 2023-09-14T03:42:20,636 creating build/lib/glycopeptidepy/structure/modification/data 2023-09-14T03:42:20,637 copying glycopeptidepy/structure/modification/data/unimod.py -> build/lib/glycopeptidepy/structure/modification/data 2023-09-14T03:42:20,640 copying glycopeptidepy/structure/modification/data/patch_unimod.py -> build/lib/glycopeptidepy/structure/modification/data 2023-09-14T03:42:20,642 copying glycopeptidepy/structure/modification/data/__init__.py -> build/lib/glycopeptidepy/structure/modification/data 2023-09-14T03:42:20,644 running egg_info 2023-09-14T03:42:20,650 writing glycopeptidepy.egg-info/PKG-INFO 2023-09-14T03:42:20,653 writing dependency_links to glycopeptidepy.egg-info/dependency_links.txt 2023-09-14T03:42:20,654 writing requirements to glycopeptidepy.egg-info/requires.txt 2023-09-14T03:42:20,656 writing top-level names to glycopeptidepy.egg-info/top_level.txt 2023-09-14T03:42:20,672 reading manifest file 'glycopeptidepy.egg-info/SOURCES.txt' 2023-09-14T03:42:20,676 reading manifest template 'MANIFEST.in' 2023-09-14T03:42:20,678 warning: no files found matching '*.csv' under directory 'glycopeptidepy/structure/data' 2023-09-14T03:42:20,679 warning: no files found matching '*.json' under directory 'glycopeptidepy/structure/data' 2023-09-14T03:42:20,856 writing manifest file 'glycopeptidepy.egg-info/SOURCES.txt' 2023-09-14T03:42:20,864 copying glycopeptidepy/_c/algorithm.c -> build/lib/glycopeptidepy/_c 2023-09-14T03:42:20,874 copying glycopeptidepy/_c/algorithm.pyx -> build/lib/glycopeptidepy/_c 2023-09-14T03:42:20,876 copying glycopeptidepy/_c/collectiontools.c -> build/lib/glycopeptidepy/_c 2023-09-14T03:42:20,884 copying glycopeptidepy/_c/collectiontools.pxd -> build/lib/glycopeptidepy/_c 2023-09-14T03:42:20,886 copying glycopeptidepy/_c/collectiontools.pyx -> build/lib/glycopeptidepy/_c 2023-09-14T03:42:20,888 copying glycopeptidepy/_c/compat.h -> build/lib/glycopeptidepy/_c 2023-09-14T03:42:20,890 copying glycopeptidepy/_c/compat.pxd -> build/lib/glycopeptidepy/_c 2023-09-14T03:42:20,892 copying glycopeptidepy/_c/count_table.c -> build/lib/glycopeptidepy/_c 2023-09-14T03:42:20,894 copying glycopeptidepy/_c/count_table.pxd -> build/lib/glycopeptidepy/_c 2023-09-14T03:42:20,896 copying glycopeptidepy/_c/count_table.pyx -> build/lib/glycopeptidepy/_c 2023-09-14T03:42:20,899 copying glycopeptidepy/_c/parser.c -> build/lib/glycopeptidepy/_c 2023-09-14T03:42:20,907 copying glycopeptidepy/_c/parser.pxd -> build/lib/glycopeptidepy/_c 2023-09-14T03:42:20,909 copying glycopeptidepy/_c/parser.pyx -> build/lib/glycopeptidepy/_c 2023-09-14T03:42:20,911 copying glycopeptidepy/_c/structure/base.c -> build/lib/glycopeptidepy/_c/structure 2023-09-14T03:42:20,925 copying glycopeptidepy/_c/structure/base.pxd -> build/lib/glycopeptidepy/_c/structure 2023-09-14T03:42:20,927 copying glycopeptidepy/_c/structure/base.pyx -> build/lib/glycopeptidepy/_c/structure 2023-09-14T03:42:20,929 copying glycopeptidepy/_c/structure/constants.c -> build/lib/glycopeptidepy/_c/structure 2023-09-14T03:42:20,936 copying glycopeptidepy/_c/structure/constants.pxd -> build/lib/glycopeptidepy/_c/structure 2023-09-14T03:42:20,938 copying glycopeptidepy/_c/structure/constants.pyx -> build/lib/glycopeptidepy/_c/structure 2023-09-14T03:42:20,940 copying glycopeptidepy/_c/structure/fragment.c -> build/lib/glycopeptidepy/_c/structure 2023-09-14T03:42:20,976 copying glycopeptidepy/_c/structure/fragment.pxd -> build/lib/glycopeptidepy/_c/structure 2023-09-14T03:42:20,979 copying glycopeptidepy/_c/structure/fragment.pyx -> build/lib/glycopeptidepy/_c/structure 2023-09-14T03:42:20,982 copying glycopeptidepy/_c/structure/glycan.c -> build/lib/glycopeptidepy/_c/structure 2023-09-14T03:42:20,994 copying glycopeptidepy/_c/structure/glycan.pxd -> build/lib/glycopeptidepy/_c/structure 2023-09-14T03:42:20,996 copying glycopeptidepy/_c/structure/glycan.pyx -> build/lib/glycopeptidepy/_c/structure 2023-09-14T03:42:20,998 copying glycopeptidepy/_c/structure/sequence_methods.c -> build/lib/glycopeptidepy/_c/structure 2023-09-14T03:42:21,013 copying glycopeptidepy/_c/structure/sequence_methods.pxd -> build/lib/glycopeptidepy/_c/structure 2023-09-14T03:42:21,015 copying glycopeptidepy/_c/structure/sequence_methods.pyx -> build/lib/glycopeptidepy/_c/structure 2023-09-14T03:42:21,018 copying glycopeptidepy/_c/structure/modification/modification.c -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,025 copying glycopeptidepy/_c/structure/modification/modification.pxd -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,027 copying glycopeptidepy/_c/structure/modification/modification.pyx -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,029 copying glycopeptidepy/_c/structure/modification/rule.c -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,041 copying glycopeptidepy/_c/structure/modification/rule.pxd -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,044 copying glycopeptidepy/_c/structure/modification/rule.pyx -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,046 copying glycopeptidepy/_c/structure/modification/source.c -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,054 copying glycopeptidepy/_c/structure/modification/source.pxd -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,056 copying glycopeptidepy/_c/structure/modification/source.pyx -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,059 copying glycopeptidepy/_c/structure/modification/target.pyx -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,061 copying glycopeptidepy/_c/structure/fragmentation_strategy/base.c -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,069 copying glycopeptidepy/_c/structure/fragmentation_strategy/base.pxd -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,071 copying glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,073 copying glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,095 copying glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pxd -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,098 copying glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,101 copying glycopeptidepy/_c/structure/fragmentation_strategy/peptide.c -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,127 copying glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pxd -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,129 copying glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,132 copying glycopeptidepy/structure/modification/data/ProteinProspectorModifications-for_gly2.csv -> build/lib/glycopeptidepy/structure/modification/data 2023-09-14T03:42:21,134 copying glycopeptidepy/structure/modification/data/unimod.json -> build/lib/glycopeptidepy/structure/modification/data 2023-09-14T03:42:21,181 installing to build/bdist.linux-armv7l/wheel 2023-09-14T03:42:21,182 running install 2023-09-14T03:42:21,209 running install_lib 2023-09-14T03:42:21,217 creating build/bdist.linux-armv7l 2023-09-14T03:42:21,218 creating build/bdist.linux-armv7l/wheel 2023-09-14T03:42:21,219 creating build/bdist.linux-armv7l/wheel/glycopeptidepy 2023-09-14T03:42:21,220 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/io 2023-09-14T03:42:21,221 copying build/lib/glycopeptidepy/io/nextprot.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io 2023-09-14T03:42:21,223 copying build/lib/glycopeptidepy/io/annotation.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io 2023-09-14T03:42:21,226 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv 2023-09-14T03:42:21,226 copying build/lib/glycopeptidepy/io/cv/peff.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv 2023-09-14T03:42:21,229 copying build/lib/glycopeptidepy/io/cv/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv 2023-09-14T03:42:21,230 copying build/lib/glycopeptidepy/io/cv/term.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv 2023-09-14T03:42:21,232 copying build/lib/glycopeptidepy/io/cv/uniprot_ptm.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv 2023-09-14T03:42:21,234 copying build/lib/glycopeptidepy/io/uniprot.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io 2023-09-14T03:42:21,237 copying build/lib/glycopeptidepy/io/utils.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io 2023-09-14T03:42:21,239 copying build/lib/glycopeptidepy/io/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io 2023-09-14T03:42:21,241 copying build/lib/glycopeptidepy/io/fasta.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io 2023-09-14T03:42:21,245 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/utils 2023-09-14T03:42:21,246 copying build/lib/glycopeptidepy/utils/intervals.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils 2023-09-14T03:42:21,248 copying build/lib/glycopeptidepy/utils/sequence_tree.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils 2023-09-14T03:42:21,251 copying build/lib/glycopeptidepy/utils/collectiontools.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils 2023-09-14T03:42:21,252 copying build/lib/glycopeptidepy/utils/memoize.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils 2023-09-14T03:42:21,254 copying build/lib/glycopeptidepy/utils/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils 2023-09-14T03:42:21,256 copying build/lib/glycopeptidepy/utils/iterators.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils 2023-09-14T03:42:21,258 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-14T03:42:21,259 copying build/lib/glycopeptidepy/_c/cythonize.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-14T03:42:21,261 copying build/lib/glycopeptidepy/_c/compat.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-14T03:42:21,262 copying build/lib/glycopeptidepy/_c/compat.h -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-14T03:42:21,264 copying build/lib/glycopeptidepy/_c/parser.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-14T03:42:21,267 copying build/lib/glycopeptidepy/_c/parser.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-14T03:42:21,268 copying build/lib/glycopeptidepy/_c/algorithm.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-14T03:42:21,277 copying build/lib/glycopeptidepy/_c/collectiontools.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-14T03:42:21,287 copying build/lib/glycopeptidepy/_c/collectiontools.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-14T03:42:21,289 copying build/lib/glycopeptidepy/_c/collectiontools.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-14T03:42:21,291 copying build/lib/glycopeptidepy/_c/count_table.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-14T03:42:21,293 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-14T03:42:21,294 copying build/lib/glycopeptidepy/_c/structure/constants.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-14T03:42:21,301 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,302 copying build/lib/glycopeptidepy/_c/structure/modification/source.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,304 copying build/lib/glycopeptidepy/_c/structure/modification/rule.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,306 copying build/lib/glycopeptidepy/_c/structure/modification/modification.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,308 copying build/lib/glycopeptidepy/_c/structure/modification/source.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,314 copying build/lib/glycopeptidepy/_c/structure/modification/modification.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,322 copying build/lib/glycopeptidepy/_c/structure/modification/source.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,323 copying build/lib/glycopeptidepy/_c/structure/modification/rule.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,326 copying build/lib/glycopeptidepy/_c/structure/modification/modification.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,327 copying build/lib/glycopeptidepy/_c/structure/modification/target.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,329 copying build/lib/glycopeptidepy/_c/structure/modification/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,330 copying build/lib/glycopeptidepy/_c/structure/modification/rule.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-14T03:42:21,344 copying build/lib/glycopeptidepy/_c/structure/base.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-14T03:42:21,346 copying build/lib/glycopeptidepy/_c/structure/constants.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-14T03:42:21,348 copying build/lib/glycopeptidepy/_c/structure/base.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-14T03:42:21,368 copying build/lib/glycopeptidepy/_c/structure/glycan.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-14T03:42:21,370 copying build/lib/glycopeptidepy/_c/structure/constants.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-14T03:42:21,373 copying build/lib/glycopeptidepy/_c/structure/fragment.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-14T03:42:21,397 copying build/lib/glycopeptidepy/_c/structure/sequence_methods.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-14T03:42:21,413 copying build/lib/glycopeptidepy/_c/structure/glycan.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-14T03:42:21,416 copying build/lib/glycopeptidepy/_c/structure/glycan.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-14T03:42:21,428 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,429 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/base.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,431 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,434 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,459 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/base.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,467 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,470 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,472 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,474 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,498 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,499 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-14T03:42:21,501 copying build/lib/glycopeptidepy/_c/structure/fragment.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-14T03:42:21,503 copying build/lib/glycopeptidepy/_c/structure/sequence_methods.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-14T03:42:21,506 copying build/lib/glycopeptidepy/_c/structure/fragment.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-14T03:42:21,509 copying build/lib/glycopeptidepy/_c/structure/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-14T03:42:21,510 copying build/lib/glycopeptidepy/_c/structure/base.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-14T03:42:21,512 copying build/lib/glycopeptidepy/_c/structure/sequence_methods.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-14T03:42:21,514 copying build/lib/glycopeptidepy/_c/algorithm.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-14T03:42:21,516 copying build/lib/glycopeptidepy/_c/count_table.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-14T03:42:21,518 copying build/lib/glycopeptidepy/_c/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-14T03:42:21,520 copying build/lib/glycopeptidepy/_c/count_table.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-14T03:42:21,524 copying build/lib/glycopeptidepy/_c/parser.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-14T03:42:21,533 copying build/lib/glycopeptidepy/enzyme.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy 2023-09-14T03:42:21,536 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-14T03:42:21,537 copying build/lib/glycopeptidepy/test/test_modification.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-14T03:42:21,540 copying build/lib/glycopeptidepy/test/test_fragment.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-14T03:42:21,542 copying build/lib/glycopeptidepy/test/test_fasta.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-14T03:42:21,545 copying build/lib/glycopeptidepy/test/test_uniprot.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-14T03:42:21,547 copying build/lib/glycopeptidepy/test/test_enzyme.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-14T03:42:21,549 copying build/lib/glycopeptidepy/test/test_residue.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-14T03:42:21,551 copying build/lib/glycopeptidepy/test/test_sequence.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-14T03:42:21,554 copying build/lib/glycopeptidepy/test/test_intervals.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-14T03:42:21,557 copying build/lib/glycopeptidepy/test/test_sequence_composition.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-14T03:42:21,559 copying build/lib/glycopeptidepy/test/test_algorithms.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-14T03:42:21,561 copying build/lib/glycopeptidepy/test/test_fragmentation_strategy.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-14T03:42:21,563 copying build/lib/glycopeptidepy/test/test_utils.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-14T03:42:21,565 copying build/lib/glycopeptidepy/test/common.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-14T03:42:21,567 copying build/lib/glycopeptidepy/test/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-14T03:42:21,568 copying build/lib/glycopeptidepy/algorithm.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy 2023-09-14T03:42:21,572 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-14T03:42:21,574 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification 2023-09-14T03:42:21,575 copying build/lib/glycopeptidepy/structure/modification/descriptors.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification 2023-09-14T03:42:21,577 copying build/lib/glycopeptidepy/structure/modification/rule.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification 2023-09-14T03:42:21,580 copying build/lib/glycopeptidepy/structure/modification/target.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification 2023-09-14T03:42:21,584 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data 2023-09-14T03:42:21,585 copying build/lib/glycopeptidepy/structure/modification/data/unimod.json -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data 2023-09-14T03:42:21,618 copying build/lib/glycopeptidepy/structure/modification/data/unimod.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data 2023-09-14T03:42:21,621 copying build/lib/glycopeptidepy/structure/modification/data/ProteinProspectorModifications-for_gly2.csv -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data 2023-09-14T03:42:21,623 copying build/lib/glycopeptidepy/structure/modification/data/patch_unimod.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data 2023-09-14T03:42:21,625 copying build/lib/glycopeptidepy/structure/modification/data/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data 2023-09-14T03:42:21,628 copying build/lib/glycopeptidepy/structure/modification/source.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification 2023-09-14T03:42:21,631 copying build/lib/glycopeptidepy/structure/modification/utils.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification 2023-09-14T03:42:21,633 copying build/lib/glycopeptidepy/structure/modification/glycosylation.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification 2023-09-14T03:42:21,636 copying build/lib/glycopeptidepy/structure/modification/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification 2023-09-14T03:42:21,639 copying build/lib/glycopeptidepy/structure/modification/modification.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification 2023-09-14T03:42:21,642 copying build/lib/glycopeptidepy/structure/constants.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-14T03:42:21,644 copying build/lib/glycopeptidepy/structure/composition.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-14T03:42:21,647 copying build/lib/glycopeptidepy/structure/sequence_composition.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-14T03:42:21,651 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence 2023-09-14T03:42:21,653 copying build/lib/glycopeptidepy/structure/sequence/mutable_sequence.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence 2023-09-14T03:42:21,657 copying build/lib/glycopeptidepy/structure/sequence/glycosylated_sequence.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence 2023-09-14T03:42:21,660 copying build/lib/glycopeptidepy/structure/sequence/implementation.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence 2023-09-14T03:42:21,663 copying build/lib/glycopeptidepy/structure/sequence/base.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence 2023-09-14T03:42:21,666 copying build/lib/glycopeptidepy/structure/sequence/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence 2023-09-14T03:42:21,669 copying build/lib/glycopeptidepy/structure/glycan.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-14T03:42:21,672 copying build/lib/glycopeptidepy/structure/terminal_group.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-14T03:42:21,675 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy 2023-09-14T03:42:21,676 copying build/lib/glycopeptidepy/structure/fragmentation_strategy/glycan.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy 2023-09-14T03:42:21,680 copying build/lib/glycopeptidepy/structure/fragmentation_strategy/peptide.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy 2023-09-14T03:42:21,685 copying build/lib/glycopeptidepy/structure/fragmentation_strategy/base.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy 2023-09-14T03:42:21,688 copying build/lib/glycopeptidepy/structure/fragmentation_strategy/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy 2023-09-14T03:42:21,691 copying build/lib/glycopeptidepy/structure/fragment.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-14T03:42:21,695 copying build/lib/glycopeptidepy/structure/parser.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-14T03:42:21,698 copying build/lib/glycopeptidepy/structure/base.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-14T03:42:21,701 copying build/lib/glycopeptidepy/structure/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-14T03:42:21,703 copying build/lib/glycopeptidepy/structure/residue.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-14T03:42:21,707 copying build/lib/glycopeptidepy/version.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy 2023-09-14T03:42:21,709 copying build/lib/glycopeptidepy/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy 2023-09-14T03:42:21,711 running install_egg_info 2023-09-14T03:42:21,730 Copying glycopeptidepy.egg-info to build/bdist.linux-armv7l/wheel/glycopeptidepy-0.0.9-py3.11.egg-info 2023-09-14T03:42:21,747 running install_scripts 2023-09-14T03:42:21,765 creating build/bdist.linux-armv7l/wheel/glycopeptidepy-0.0.9.dist-info/WHEEL 2023-09-14T03:42:21,768 creating '/tmp/pip-wheel-n9iwejko/.tmp-xhhnj6y7/glycopeptidepy-0.0.9-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-14T03:42:21,771 adding 'glycopeptidepy/__init__.py' 2023-09-14T03:42:21,775 adding 'glycopeptidepy/algorithm.py' 2023-09-14T03:42:21,778 adding 'glycopeptidepy/enzyme.py' 2023-09-14T03:42:21,780 adding 'glycopeptidepy/version.py' 2023-09-14T03:42:21,782 adding 'glycopeptidepy/_c/__init__.py' 2023-09-14T03:42:21,854 adding 'glycopeptidepy/_c/algorithm.c' 2023-09-14T03:42:21,860 adding 'glycopeptidepy/_c/algorithm.pyx' 2023-09-14T03:42:21,897 adding 'glycopeptidepy/_c/collectiontools.c' 2023-09-14T03:42:21,901 adding 'glycopeptidepy/_c/collectiontools.pxd' 2023-09-14T03:42:21,902 adding 'glycopeptidepy/_c/collectiontools.pyx' 2023-09-14T03:42:21,904 adding 'glycopeptidepy/_c/compat.h' 2023-09-14T03:42:21,905 adding 'glycopeptidepy/_c/compat.pxd' 2023-09-14T03:42:21,906 adding 'glycopeptidepy/_c/count_table.c' 2023-09-14T03:42:21,907 adding 'glycopeptidepy/_c/count_table.pxd' 2023-09-14T03:42:21,910 adding 'glycopeptidepy/_c/count_table.pyx' 2023-09-14T03:42:21,912 adding 'glycopeptidepy/_c/cythonize.py' 2023-09-14T03:42:21,940 adding 'glycopeptidepy/_c/parser.c' 2023-09-14T03:42:21,944 adding 'glycopeptidepy/_c/parser.pxd' 2023-09-14T03:42:21,946 adding 'glycopeptidepy/_c/parser.pyx' 2023-09-14T03:42:21,947 adding 'glycopeptidepy/_c/structure/__init__.py' 2023-09-14T03:42:22,001 adding 'glycopeptidepy/_c/structure/base.c' 2023-09-14T03:42:22,009 adding 'glycopeptidepy/_c/structure/base.pxd' 2023-09-14T03:42:22,010 adding 'glycopeptidepy/_c/structure/base.pyx' 2023-09-14T03:42:22,029 adding 'glycopeptidepy/_c/structure/constants.c' 2023-09-14T03:42:22,032 adding 'glycopeptidepy/_c/structure/constants.pxd' 2023-09-14T03:42:22,033 adding 'glycopeptidepy/_c/structure/constants.pyx' 2023-09-14T03:42:22,115 adding 'glycopeptidepy/_c/structure/fragment.c' 2023-09-14T03:42:22,127 adding 'glycopeptidepy/_c/structure/fragment.pxd' 2023-09-14T03:42:22,130 adding 'glycopeptidepy/_c/structure/fragment.pyx' 2023-09-14T03:42:22,169 adding 'glycopeptidepy/_c/structure/glycan.c' 2023-09-14T03:42:22,175 adding 'glycopeptidepy/_c/structure/glycan.pxd' 2023-09-14T03:42:22,177 adding 'glycopeptidepy/_c/structure/glycan.pyx' 2023-09-14T03:42:22,231 adding 'glycopeptidepy/_c/structure/sequence_methods.c' 2023-09-14T03:42:22,239 adding 'glycopeptidepy/_c/structure/sequence_methods.pxd' 2023-09-14T03:42:22,241 adding 'glycopeptidepy/_c/structure/sequence_methods.pyx' 2023-09-14T03:42:22,244 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/__init__.py' 2023-09-14T03:42:22,270 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/base.c' 2023-09-14T03:42:22,274 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/base.pxd' 2023-09-14T03:42:22,275 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx' 2023-09-14T03:42:22,358 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c' 2023-09-14T03:42:22,370 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pxd' 2023-09-14T03:42:22,374 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx' 2023-09-14T03:42:22,451 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/peptide.c' 2023-09-14T03:42:22,462 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pxd' 2023-09-14T03:42:22,465 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx' 2023-09-14T03:42:22,467 adding 'glycopeptidepy/_c/structure/modification/__init__.py' 2023-09-14T03:42:22,493 adding 'glycopeptidepy/_c/structure/modification/modification.c' 2023-09-14T03:42:22,496 adding 'glycopeptidepy/_c/structure/modification/modification.pxd' 2023-09-14T03:42:22,498 adding 'glycopeptidepy/_c/structure/modification/modification.pyx' 2023-09-14T03:42:22,534 adding 'glycopeptidepy/_c/structure/modification/rule.c' 2023-09-14T03:42:22,540 adding 'glycopeptidepy/_c/structure/modification/rule.pxd' 2023-09-14T03:42:22,542 adding 'glycopeptidepy/_c/structure/modification/rule.pyx' 2023-09-14T03:42:22,567 adding 'glycopeptidepy/_c/structure/modification/source.c' 2023-09-14T03:42:22,570 adding 'glycopeptidepy/_c/structure/modification/source.pxd' 2023-09-14T03:42:22,572 adding 'glycopeptidepy/_c/structure/modification/source.pyx' 2023-09-14T03:42:22,574 adding 'glycopeptidepy/_c/structure/modification/target.pyx' 2023-09-14T03:42:22,575 adding 'glycopeptidepy/io/__init__.py' 2023-09-14T03:42:22,577 adding 'glycopeptidepy/io/annotation.py' 2023-09-14T03:42:22,581 adding 'glycopeptidepy/io/fasta.py' 2023-09-14T03:42:22,582 adding 'glycopeptidepy/io/nextprot.py' 2023-09-14T03:42:22,585 adding 'glycopeptidepy/io/uniprot.py' 2023-09-14T03:42:22,586 adding 'glycopeptidepy/io/utils.py' 2023-09-14T03:42:22,588 adding 'glycopeptidepy/io/cv/__init__.py' 2023-09-14T03:42:22,591 adding 'glycopeptidepy/io/cv/peff.py' 2023-09-14T03:42:22,592 adding 'glycopeptidepy/io/cv/term.py' 2023-09-14T03:42:22,593 adding 'glycopeptidepy/io/cv/uniprot_ptm.py' 2023-09-14T03:42:22,595 adding 'glycopeptidepy/structure/__init__.py' 2023-09-14T03:42:22,596 adding 'glycopeptidepy/structure/base.py' 2023-09-14T03:42:22,598 adding 'glycopeptidepy/structure/composition.py' 2023-09-14T03:42:22,599 adding 'glycopeptidepy/structure/constants.py' 2023-09-14T03:42:22,601 adding 'glycopeptidepy/structure/fragment.py' 2023-09-14T03:42:22,603 adding 'glycopeptidepy/structure/glycan.py' 2023-09-14T03:42:22,605 adding 'glycopeptidepy/structure/parser.py' 2023-09-14T03:42:22,607 adding 'glycopeptidepy/structure/residue.py' 2023-09-14T03:42:22,609 adding 'glycopeptidepy/structure/sequence_composition.py' 2023-09-14T03:42:22,611 adding 'glycopeptidepy/structure/terminal_group.py' 2023-09-14T03:42:22,612 adding 'glycopeptidepy/structure/fragmentation_strategy/__init__.py' 2023-09-14T03:42:22,614 adding 'glycopeptidepy/structure/fragmentation_strategy/base.py' 2023-09-14T03:42:22,618 adding 'glycopeptidepy/structure/fragmentation_strategy/glycan.py' 2023-09-14T03:42:22,621 adding 'glycopeptidepy/structure/fragmentation_strategy/peptide.py' 2023-09-14T03:42:22,623 adding 'glycopeptidepy/structure/modification/__init__.py' 2023-09-14T03:42:22,624 adding 'glycopeptidepy/structure/modification/descriptors.py' 2023-09-14T03:42:22,626 adding 'glycopeptidepy/structure/modification/glycosylation.py' 2023-09-14T03:42:22,628 adding 'glycopeptidepy/structure/modification/modification.py' 2023-09-14T03:42:22,631 adding 'glycopeptidepy/structure/modification/rule.py' 2023-09-14T03:42:22,633 adding 'glycopeptidepy/structure/modification/source.py' 2023-09-14T03:42:22,635 adding 'glycopeptidepy/structure/modification/target.py' 2023-09-14T03:42:22,637 adding 'glycopeptidepy/structure/modification/utils.py' 2023-09-14T03:42:22,639 adding 'glycopeptidepy/structure/modification/data/ProteinProspectorModifications-for_gly2.csv' 2023-09-14T03:42:22,640 adding 'glycopeptidepy/structure/modification/data/__init__.py' 2023-09-14T03:42:22,641 adding 'glycopeptidepy/structure/modification/data/patch_unimod.py' 2023-09-14T03:42:22,705 adding 'glycopeptidepy/structure/modification/data/unimod.json' 2023-09-14T03:42:22,723 adding 'glycopeptidepy/structure/modification/data/unimod.py' 2023-09-14T03:42:22,725 adding 'glycopeptidepy/structure/sequence/__init__.py' 2023-09-14T03:42:22,727 adding 'glycopeptidepy/structure/sequence/base.py' 2023-09-14T03:42:22,728 adding 'glycopeptidepy/structure/sequence/glycosylated_sequence.py' 2023-09-14T03:42:22,730 adding 'glycopeptidepy/structure/sequence/implementation.py' 2023-09-14T03:42:22,732 adding 'glycopeptidepy/structure/sequence/mutable_sequence.py' 2023-09-14T03:42:22,734 adding 'glycopeptidepy/test/__init__.py' 2023-09-14T03:42:22,735 adding 'glycopeptidepy/test/common.py' 2023-09-14T03:42:22,736 adding 'glycopeptidepy/test/test_algorithms.py' 2023-09-14T03:42:22,738 adding 'glycopeptidepy/test/test_enzyme.py' 2023-09-14T03:42:22,740 adding 'glycopeptidepy/test/test_fasta.py' 2023-09-14T03:42:22,741 adding 'glycopeptidepy/test/test_fragment.py' 2023-09-14T03:42:22,743 adding 'glycopeptidepy/test/test_fragmentation_strategy.py' 2023-09-14T03:42:22,744 adding 'glycopeptidepy/test/test_intervals.py' 2023-09-14T03:42:22,745 adding 'glycopeptidepy/test/test_modification.py' 2023-09-14T03:42:22,746 adding 'glycopeptidepy/test/test_residue.py' 2023-09-14T03:42:22,748 adding 'glycopeptidepy/test/test_sequence.py' 2023-09-14T03:42:22,749 adding 'glycopeptidepy/test/test_sequence_composition.py' 2023-09-14T03:42:22,751 adding 'glycopeptidepy/test/test_uniprot.py' 2023-09-14T03:42:22,752 adding 'glycopeptidepy/test/test_utils.py' 2023-09-14T03:42:22,754 adding 'glycopeptidepy/utils/__init__.py' 2023-09-14T03:42:22,755 adding 'glycopeptidepy/utils/collectiontools.py' 2023-09-14T03:42:22,757 adding 'glycopeptidepy/utils/intervals.py' 2023-09-14T03:42:22,759 adding 'glycopeptidepy/utils/iterators.py' 2023-09-14T03:42:22,760 adding 'glycopeptidepy/utils/memoize.py' 2023-09-14T03:42:22,762 adding 'glycopeptidepy/utils/sequence_tree.py' 2023-09-14T03:42:22,764 adding 'glycopeptidepy-0.0.9.dist-info/METADATA' 2023-09-14T03:42:22,765 adding 'glycopeptidepy-0.0.9.dist-info/WHEEL' 2023-09-14T03:42:22,766 adding 'glycopeptidepy-0.0.9.dist-info/top_level.txt' 2023-09-14T03:42:22,768 adding 'glycopeptidepy-0.0.9.dist-info/RECORD' 2023-09-14T03:42:22,784 removing build/bdist.linux-armv7l/wheel 2023-09-14T03:42:22,827 *************************************************************************** 2023-09-14T03:42:22,828 WARNING: The C extension could not be compiled, speedups are not enabled. 2023-09-14T03:42:22,829 Plain-Python build succeeded. 2023-09-14T03:42:22,830 *************************************************************************** 2023-09-14T03:42:23,104 Building wheel for glycopeptidepy (pyproject.toml): finished with status 'done' 2023-09-14T03:42:23,140 Created wheel for glycopeptidepy: filename=glycopeptidepy-0.0.9-py3-none-any.whl size=1323909 sha256=95e6c79f3b90ea47db8b424334e6927dc1685c90d0c576d75a202e8183b5bf68 2023-09-14T03:42:23,141 Stored in directory: /tmp/pip-ephem-wheel-cache-_bli1wwa/wheels/7c/c3/2f/c977dfb3f5e5dfab475438ae91f45abd123e640b9e4bda3f7b 2023-09-14T03:42:23,154 Successfully built glycopeptidepy 2023-09-14T03:42:23,197 Removed build tracker: '/tmp/pip-build-tracker-wiqfdkgr'