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2023-09-15T07:45:21,619 Created temporary directory: /tmp/pip-build-env-rmk202ue 2023-09-15T07:45:21,624 Installing build dependencies: started 2023-09-15T07:45:21,625 Running command pip subprocess to install build dependencies 2023-09-15T07:45:22,776 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-15T07:45:23,288 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-15T07:45:27,365 Collecting setuptools 2023-09-15T07:45:27,366 Obtaining dependency information for setuptools from https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl.metadata 2023-09-15T07:45:27,372 Using cached setuptools-68.2.2-py3-none-any.whl.metadata (6.3 kB) 2023-09-15T07:45:27,577 Collecting wheel 2023-09-15T07:45:27,592 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-09-15T07:45:29,227 Collecting Cython 2023-09-15T07:45:29,228 Obtaining dependency information for Cython from https://files.pythonhosted.org/packages/03/e9/9cc0c4f0d8a566089d096254cd25168a0db02dd047863a7f995d8d3eefa7/Cython-3.0.2-py2.py3-none-any.whl.metadata 2023-09-15T07:45:29,234 Using cached Cython-3.0.2-py2.py3-none-any.whl.metadata (3.1 kB) 2023-09-15T07:45:29,492 Collecting glypy 2023-09-15T07:45:29,506 Downloading https://www.piwheels.org/simple/glypy/glypy-1.0.3-cp311-cp311-linux_armv7l.whl (1.7 MB) 2023-09-15T07:45:29,871 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.7/1.7 MB 4.8 MB/s eta 0:00:00 2023-09-15T07:45:30,244 Collecting hjson (from glypy) 2023-09-15T07:45:30,257 Downloading https://www.piwheels.org/simple/hjson/hjson-3.1.0-py3-none-any.whl (54 kB) 2023-09-15T07:45:30,273 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 54.0/54.0 kB 5.5 MB/s eta 0:00:00 2023-09-15T07:45:30,375 Collecting six (from glypy) 2023-09-15T07:45:30,390 Using cached https://www.piwheels.org/simple/six/six-1.16.0-py2.py3-none-any.whl (11 kB) 2023-09-15T07:45:30,426 Using cached setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-09-15T07:45:30,474 Using cached Cython-3.0.2-py2.py3-none-any.whl (1.2 MB) 2023-09-15T07:45:32,988 Installing collected packages: hjson, wheel, six, setuptools, Cython, glypy 2023-09-15T07:45:33,217 Creating /tmp/pip-build-env-rmk202ue/overlay/local/bin 2023-09-15T07:45:33,219 changing mode of /tmp/pip-build-env-rmk202ue/overlay/local/bin/hjson to 755 2023-09-15T07:45:33,437 changing mode of /tmp/pip-build-env-rmk202ue/overlay/local/bin/wheel to 755 2023-09-15T07:45:38,412 changing mode of /tmp/pip-build-env-rmk202ue/overlay/local/bin/cygdb to 755 2023-09-15T07:45:38,414 changing mode of /tmp/pip-build-env-rmk202ue/overlay/local/bin/cython to 755 2023-09-15T07:45:38,416 changing mode of /tmp/pip-build-env-rmk202ue/overlay/local/bin/cythonize to 755 2023-09-15T07:45:39,744 Successfully installed Cython-3.0.2 glypy-1.0.3 hjson-3.1.0 setuptools-68.2.2 six-1.16.0 wheel-0.41.2 2023-09-15T07:45:40,386 Installing build dependencies: finished with status 'done' 2023-09-15T07:45:40,397 Getting requirements to build wheel: started 2023-09-15T07:45:40,399 Running command Getting requirements to build wheel 2023-09-15T07:45:44,759 /tmp/pip-build-env-rmk202ue/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-n2q8vz1p/glycopeptidepy_dd8c84a682ed4b4a97e8ba45e5f3c570/glycopeptidepy/_c/algorithm.pyx 2023-09-15T07:45:44,759 tree = Parsing.p_module(s, pxd, full_module_name) 2023-09-15T07:45:45,943 /tmp/pip-build-env-rmk202ue/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-n2q8vz1p/glycopeptidepy_dd8c84a682ed4b4a97e8ba45e5f3c570/glycopeptidepy/_c/collectiontools.pxd 2023-09-15T07:45:45,944 tree = Parsing.p_module(s, pxd, full_module_name) 2023-09-15T07:45:47,789 /tmp/pip-build-env-rmk202ue/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-n2q8vz1p/glycopeptidepy_dd8c84a682ed4b4a97e8ba45e5f3c570/glycopeptidepy/_c/count_table.pxd 2023-09-15T07:45:47,790 tree = Parsing.p_module(s, pxd, full_module_name) 2023-09-15T07:45:49,241 warning: glycopeptidepy/_c/count_table.pyx:15:0: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310 2023-09-15T07:45:49,258 warning: glycopeptidepy/_c/count_table.pyx:102:0: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 2023-09-15T07:45:49,282 warning: glycopeptidepy/_c/count_table.pyx:184:8: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 2023-09-15T07:45:49,285 warning: glycopeptidepy/_c/count_table.pyx:195:8: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 2023-09-15T07:45:49,458 Error compiling Cython file: 2023-09-15T07:45:49,458 ------------------------------------------------------------ 2023-09-15T07:45:49,459 ... 2023-09-15T07:45:49,459 pytable[int(12)] = 11 2023-09-15T07:45:49,460 pytable[255.2] = 99 2023-09-15T07:45:49,460 assert len(pytable) == 2 2023-09-15T07:45:49,461 del pytable 2023-09-15T07:45:49,461 pytable = CountTable._create() 2023-09-15T07:45:49,462 print pytable 2023-09-15T07:45:49,462 ^ 2023-09-15T07:45:49,463 ------------------------------------------------------------ 2023-09-15T07:45:49,464 glycopeptidepy/_c/count_table.pyx:952:10: Syntax error in simple statement list 2023-09-15T07:45:49,541 Compiling glycopeptidepy/_c/collectiontools.pyx because it changed. 2023-09-15T07:45:49,542 Compiling glycopeptidepy/_c/count_table.pyx because it changed. 2023-09-15T07:45:49,542 Compiling glycopeptidepy/_c/parser.pyx because it changed. 2023-09-15T07:45:49,543 Compiling glycopeptidepy/_c/structure/base.pyx because it changed. 2023-09-15T07:45:49,543 Compiling glycopeptidepy/_c/structure/fragment.pyx because it changed. 2023-09-15T07:45:49,544 Compiling glycopeptidepy/_c/structure/constants.pyx because it changed. 2023-09-15T07:45:49,544 Compiling glycopeptidepy/_c/structure/glycan.pyx because it changed. 2023-09-15T07:45:49,545 Compiling glycopeptidepy/_c/structure/sequence_methods.pyx because it changed. 2023-09-15T07:45:49,545 Compiling glycopeptidepy/_c/structure/modification/rule.pyx because it changed. 2023-09-15T07:45:49,546 Compiling glycopeptidepy/_c/structure/modification/modification.pyx because it changed. 2023-09-15T07:45:49,546 Compiling glycopeptidepy/_c/structure/modification/source.pyx because it changed. 2023-09-15T07:45:49,546 Compiling glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx because it changed. 2023-09-15T07:45:49,547 Compiling glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx because it changed. 2023-09-15T07:45:49,547 Compiling glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx because it changed. 2023-09-15T07:45:49,548 Compiling glycopeptidepy/_c/algorithm.pyx because it changed. 2023-09-15T07:45:49,548 [ 1/15] Cythonizing glycopeptidepy/_c/algorithm.pyx 2023-09-15T07:45:49,549 [ 2/15] Cythonizing glycopeptidepy/_c/collectiontools.pyx 2023-09-15T07:45:49,549 [ 3/15] Cythonizing glycopeptidepy/_c/count_table.pyx 2023-09-15T07:45:49,550 running egg_info 2023-09-15T07:45:49,551 writing glycopeptidepy.egg-info/PKG-INFO 2023-09-15T07:45:49,552 writing dependency_links to glycopeptidepy.egg-info/dependency_links.txt 2023-09-15T07:45:49,554 writing requirements to glycopeptidepy.egg-info/requires.txt 2023-09-15T07:45:49,555 writing top-level names to glycopeptidepy.egg-info/top_level.txt 2023-09-15T07:45:49,593 reading manifest file 'glycopeptidepy.egg-info/SOURCES.txt' 2023-09-15T07:45:49,601 reading manifest template 'MANIFEST.in' 2023-09-15T07:45:49,602 warning: no files found matching '*.csv' under directory 'glycopeptidepy/structure/data' 2023-09-15T07:45:49,602 warning: no files found matching '*.json' under directory 'glycopeptidepy/structure/data' 2023-09-15T07:45:49,768 writing manifest file 'glycopeptidepy.egg-info/SOURCES.txt' 2023-09-15T07:45:49,770 *************************************************************************** 2023-09-15T07:45:49,771 WARNING: The C extension could not be compiled, speedups are not enabled. 2023-09-15T07:45:49,772 Plain-Python build succeeded. 2023-09-15T07:45:49,773 *************************************************************************** 2023-09-15T07:45:50,030 Getting requirements to build wheel: finished with status 'done' 2023-09-15T07:45:50,043 Created temporary directory: /tmp/pip-modern-metadata-twuox_zr 2023-09-15T07:45:50,045 Preparing metadata (pyproject.toml): started 2023-09-15T07:45:50,047 Running command Preparing metadata (pyproject.toml) 2023-09-15T07:45:53,835 /tmp/pip-build-env-rmk202ue/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-n2q8vz1p/glycopeptidepy_dd8c84a682ed4b4a97e8ba45e5f3c570/glycopeptidepy/_c/count_table.pxd 2023-09-15T07:45:53,835 tree = Parsing.p_module(s, pxd, full_module_name) 2023-09-15T07:45:55,383 warning: glycopeptidepy/_c/count_table.pyx:15:0: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310 2023-09-15T07:45:55,401 warning: glycopeptidepy/_c/count_table.pyx:102:0: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 2023-09-15T07:45:55,421 warning: glycopeptidepy/_c/count_table.pyx:184:8: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 2023-09-15T07:45:55,423 warning: glycopeptidepy/_c/count_table.pyx:195:8: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 2023-09-15T07:45:55,604 Error compiling Cython file: 2023-09-15T07:45:55,604 ------------------------------------------------------------ 2023-09-15T07:45:55,605 ... 2023-09-15T07:45:55,605 pytable[int(12)] = 11 2023-09-15T07:45:55,605 pytable[255.2] = 99 2023-09-15T07:45:55,606 assert len(pytable) == 2 2023-09-15T07:45:55,606 del pytable 2023-09-15T07:45:55,607 pytable = CountTable._create() 2023-09-15T07:45:55,607 print pytable 2023-09-15T07:45:55,608 ^ 2023-09-15T07:45:55,608 ------------------------------------------------------------ 2023-09-15T07:45:55,609 glycopeptidepy/_c/count_table.pyx:952:10: Syntax error in simple statement list 2023-09-15T07:45:55,657 Compiling glycopeptidepy/_c/count_table.pyx because it changed. 2023-09-15T07:45:55,657 Compiling glycopeptidepy/_c/parser.pyx because it changed. 2023-09-15T07:45:55,658 Compiling glycopeptidepy/_c/structure/base.pyx because it changed. 2023-09-15T07:45:55,658 Compiling glycopeptidepy/_c/structure/fragment.pyx because it changed. 2023-09-15T07:45:55,659 Compiling glycopeptidepy/_c/structure/constants.pyx because it changed. 2023-09-15T07:45:55,660 Compiling glycopeptidepy/_c/structure/glycan.pyx because it changed. 2023-09-15T07:45:55,660 Compiling glycopeptidepy/_c/structure/sequence_methods.pyx because it changed. 2023-09-15T07:45:55,661 Compiling glycopeptidepy/_c/structure/modification/rule.pyx because it changed. 2023-09-15T07:45:55,661 Compiling glycopeptidepy/_c/structure/modification/modification.pyx because it changed. 2023-09-15T07:45:55,662 Compiling glycopeptidepy/_c/structure/modification/source.pyx because it changed. 2023-09-15T07:45:55,662 Compiling glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx because it changed. 2023-09-15T07:45:55,663 Compiling glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx because it changed. 2023-09-15T07:45:55,664 Compiling glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx because it changed. 2023-09-15T07:45:55,664 [ 1/13] Cythonizing glycopeptidepy/_c/count_table.pyx 2023-09-15T07:45:55,665 running dist_info 2023-09-15T07:45:55,678 creating /tmp/pip-modern-metadata-twuox_zr/glycopeptidepy.egg-info 2023-09-15T07:45:55,683 writing /tmp/pip-modern-metadata-twuox_zr/glycopeptidepy.egg-info/PKG-INFO 2023-09-15T07:45:55,686 writing dependency_links to /tmp/pip-modern-metadata-twuox_zr/glycopeptidepy.egg-info/dependency_links.txt 2023-09-15T07:45:55,688 writing requirements to /tmp/pip-modern-metadata-twuox_zr/glycopeptidepy.egg-info/requires.txt 2023-09-15T07:45:55,689 writing top-level names to /tmp/pip-modern-metadata-twuox_zr/glycopeptidepy.egg-info/top_level.txt 2023-09-15T07:45:55,691 writing manifest file '/tmp/pip-modern-metadata-twuox_zr/glycopeptidepy.egg-info/SOURCES.txt' 2023-09-15T07:45:55,719 reading manifest file '/tmp/pip-modern-metadata-twuox_zr/glycopeptidepy.egg-info/SOURCES.txt' 2023-09-15T07:45:55,722 reading manifest template 'MANIFEST.in' 2023-09-15T07:45:55,722 warning: no files found matching '*.csv' under directory 'glycopeptidepy/structure/data' 2023-09-15T07:45:55,723 warning: no files found matching '*.json' under directory 'glycopeptidepy/structure/data' 2023-09-15T07:45:55,885 writing manifest file '/tmp/pip-modern-metadata-twuox_zr/glycopeptidepy.egg-info/SOURCES.txt' 2023-09-15T07:45:55,886 creating '/tmp/pip-modern-metadata-twuox_zr/glycopeptidepy-0.0.13.dist-info' 2023-09-15T07:45:55,979 *************************************************************************** 2023-09-15T07:45:55,980 WARNING: The C extension could not be compiled, speedups are not enabled. 2023-09-15T07:45:55,980 Plain-Python build succeeded. 2023-09-15T07:45:55,981 *************************************************************************** 2023-09-15T07:45:56,246 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-15T07:45:56,253 Source in /tmp/pip-wheel-n2q8vz1p/glycopeptidepy_dd8c84a682ed4b4a97e8ba45e5f3c570 has version 0.0.13, which satisfies requirement glycopeptidepy==0.0.13 from https://files.pythonhosted.org/packages/62/d2/c2a541d3db2663bcc58e00b725036f06ec9e47e3294266e12960f640f835/glycopeptidepy-0.0.13.tar.gz 2023-09-15T07:45:56,254 Removed glycopeptidepy==0.0.13 from https://files.pythonhosted.org/packages/62/d2/c2a541d3db2663bcc58e00b725036f06ec9e47e3294266e12960f640f835/glycopeptidepy-0.0.13.tar.gz from build tracker '/tmp/pip-build-tracker-bmq3z1g0' 2023-09-15T07:45:56,258 Created temporary directory: /tmp/pip-unpack-9_z6gmyu 2023-09-15T07:45:56,260 Created temporary directory: /tmp/pip-unpack-s2m5z608 2023-09-15T07:45:56,270 Building wheels for collected packages: glycopeptidepy 2023-09-15T07:45:56,279 Created temporary directory: /tmp/pip-wheel-4ei_63k7 2023-09-15T07:45:56,280 Destination directory: /tmp/pip-wheel-4ei_63k7 2023-09-15T07:45:56,285 Building wheel for glycopeptidepy (pyproject.toml): started 2023-09-15T07:45:56,286 Running command Building wheel for glycopeptidepy (pyproject.toml) 2023-09-15T07:46:00,021 /tmp/pip-build-env-rmk202ue/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-n2q8vz1p/glycopeptidepy_dd8c84a682ed4b4a97e8ba45e5f3c570/glycopeptidepy/_c/count_table.pxd 2023-09-15T07:46:00,021 tree = Parsing.p_module(s, pxd, full_module_name) 2023-09-15T07:46:01,756 warning: glycopeptidepy/_c/count_table.pyx:15:0: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310 2023-09-15T07:46:01,773 warning: glycopeptidepy/_c/count_table.pyx:102:0: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 2023-09-15T07:46:01,793 warning: glycopeptidepy/_c/count_table.pyx:184:8: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 2023-09-15T07:46:01,796 warning: glycopeptidepy/_c/count_table.pyx:195:8: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 2023-09-15T07:46:01,973 Error compiling Cython file: 2023-09-15T07:46:01,974 ------------------------------------------------------------ 2023-09-15T07:46:01,974 ... 2023-09-15T07:46:01,975 pytable[int(12)] = 11 2023-09-15T07:46:01,975 pytable[255.2] = 99 2023-09-15T07:46:01,976 assert len(pytable) == 2 2023-09-15T07:46:01,977 del pytable 2023-09-15T07:46:01,977 pytable = CountTable._create() 2023-09-15T07:46:01,978 print pytable 2023-09-15T07:46:01,978 ^ 2023-09-15T07:46:01,979 ------------------------------------------------------------ 2023-09-15T07:46:01,980 glycopeptidepy/_c/count_table.pyx:952:10: Syntax error in simple statement list 2023-09-15T07:46:02,070 Compiling glycopeptidepy/_c/count_table.pyx because it changed. 2023-09-15T07:46:02,070 Compiling glycopeptidepy/_c/parser.pyx because it changed. 2023-09-15T07:46:02,071 Compiling glycopeptidepy/_c/structure/base.pyx because it changed. 2023-09-15T07:46:02,072 Compiling glycopeptidepy/_c/structure/fragment.pyx because it changed. 2023-09-15T07:46:02,072 Compiling glycopeptidepy/_c/structure/constants.pyx because it changed. 2023-09-15T07:46:02,072 Compiling glycopeptidepy/_c/structure/glycan.pyx because it changed. 2023-09-15T07:46:02,073 Compiling glycopeptidepy/_c/structure/sequence_methods.pyx because it changed. 2023-09-15T07:46:02,073 Compiling glycopeptidepy/_c/structure/modification/rule.pyx because it changed. 2023-09-15T07:46:02,074 Compiling glycopeptidepy/_c/structure/modification/modification.pyx because it changed. 2023-09-15T07:46:02,074 Compiling glycopeptidepy/_c/structure/modification/source.pyx because it changed. 2023-09-15T07:46:02,075 Compiling glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx because it changed. 2023-09-15T07:46:02,075 Compiling glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx because it changed. 2023-09-15T07:46:02,076 Compiling glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx because it changed. 2023-09-15T07:46:02,076 [ 1/13] Cythonizing glycopeptidepy/_c/count_table.pyx 2023-09-15T07:46:02,077 running bdist_wheel 2023-09-15T07:46:02,108 running build 2023-09-15T07:46:02,109 running build_py 2023-09-15T07:46:02,117 creating build 2023-09-15T07:46:02,117 creating build/lib 2023-09-15T07:46:02,118 creating build/lib/glycopeptidepy 2023-09-15T07:46:02,119 copying glycopeptidepy/version.py -> build/lib/glycopeptidepy 2023-09-15T07:46:02,121 copying glycopeptidepy/enzyme.py -> build/lib/glycopeptidepy 2023-09-15T07:46:02,123 copying glycopeptidepy/__init__.py -> build/lib/glycopeptidepy 2023-09-15T07:46:02,125 copying glycopeptidepy/algorithm.py -> build/lib/glycopeptidepy 2023-09-15T07:46:02,128 creating build/lib/glycopeptidepy/_c 2023-09-15T07:46:02,129 copying glycopeptidepy/_c/__init__.py -> build/lib/glycopeptidepy/_c 2023-09-15T07:46:02,130 copying glycopeptidepy/_c/cythonize.py -> build/lib/glycopeptidepy/_c 2023-09-15T07:46:02,132 creating build/lib/glycopeptidepy/utils 2023-09-15T07:46:02,133 copying glycopeptidepy/utils/iterators.py -> build/lib/glycopeptidepy/utils 2023-09-15T07:46:02,135 copying glycopeptidepy/utils/__init__.py -> build/lib/glycopeptidepy/utils 2023-09-15T07:46:02,137 copying glycopeptidepy/utils/memoize.py -> build/lib/glycopeptidepy/utils 2023-09-15T07:46:02,138 copying glycopeptidepy/utils/sequence_tree.py -> build/lib/glycopeptidepy/utils 2023-09-15T07:46:02,141 copying glycopeptidepy/utils/collectiontools.py -> build/lib/glycopeptidepy/utils 2023-09-15T07:46:02,142 copying glycopeptidepy/utils/intervals.py -> build/lib/glycopeptidepy/utils 2023-09-15T07:46:02,145 creating build/lib/glycopeptidepy/io 2023-09-15T07:46:02,146 copying glycopeptidepy/io/uniprot.py -> build/lib/glycopeptidepy/io 2023-09-15T07:46:02,149 copying glycopeptidepy/io/fasta.py -> build/lib/glycopeptidepy/io 2023-09-15T07:46:02,152 copying glycopeptidepy/io/annotation.py -> build/lib/glycopeptidepy/io 2023-09-15T07:46:02,154 copying glycopeptidepy/io/__init__.py -> build/lib/glycopeptidepy/io 2023-09-15T07:46:02,155 copying glycopeptidepy/io/utils.py -> build/lib/glycopeptidepy/io 2023-09-15T07:46:02,157 copying glycopeptidepy/io/nextprot.py -> build/lib/glycopeptidepy/io 2023-09-15T07:46:02,159 creating build/lib/glycopeptidepy/structure 2023-09-15T07:46:02,160 copying glycopeptidepy/structure/terminal_group.py -> build/lib/glycopeptidepy/structure 2023-09-15T07:46:02,162 copying glycopeptidepy/structure/base.py -> build/lib/glycopeptidepy/structure 2023-09-15T07:46:02,164 copying glycopeptidepy/structure/__init__.py -> build/lib/glycopeptidepy/structure 2023-09-15T07:46:02,165 copying glycopeptidepy/structure/residue.py -> build/lib/glycopeptidepy/structure 2023-09-15T07:46:02,168 copying glycopeptidepy/structure/constants.py -> build/lib/glycopeptidepy/structure 2023-09-15T07:46:02,169 copying glycopeptidepy/structure/parser.py -> build/lib/glycopeptidepy/structure 2023-09-15T07:46:02,171 copying glycopeptidepy/structure/fragment.py -> build/lib/glycopeptidepy/structure 2023-09-15T07:46:02,174 copying glycopeptidepy/structure/sequence_composition.py -> build/lib/glycopeptidepy/structure 2023-09-15T07:46:02,176 copying glycopeptidepy/structure/glycan.py -> build/lib/glycopeptidepy/structure 2023-09-15T07:46:02,178 copying glycopeptidepy/structure/composition.py -> build/lib/glycopeptidepy/structure 2023-09-15T07:46:02,180 creating build/lib/glycopeptidepy/test 2023-09-15T07:46:02,181 copying glycopeptidepy/test/test_algorithms.py -> build/lib/glycopeptidepy/test 2023-09-15T07:46:02,183 copying glycopeptidepy/test/common.py -> build/lib/glycopeptidepy/test 2023-09-15T07:46:02,184 copying glycopeptidepy/test/test_sequence.py -> build/lib/glycopeptidepy/test 2023-09-15T07:46:02,186 copying glycopeptidepy/test/test_residue.py -> build/lib/glycopeptidepy/test 2023-09-15T07:46:02,187 copying glycopeptidepy/test/test_sequence_composition.py -> build/lib/glycopeptidepy/test 2023-09-15T07:46:02,189 copying glycopeptidepy/test/__init__.py -> build/lib/glycopeptidepy/test 2023-09-15T07:46:02,190 copying glycopeptidepy/test/test_fasta.py -> build/lib/glycopeptidepy/test 2023-09-15T07:46:02,192 copying glycopeptidepy/test/test_enzyme.py -> build/lib/glycopeptidepy/test 2023-09-15T07:46:02,194 copying glycopeptidepy/test/test_fragmentation_strategy.py -> build/lib/glycopeptidepy/test 2023-09-15T07:46:02,195 copying glycopeptidepy/test/test_utils.py -> build/lib/glycopeptidepy/test 2023-09-15T07:46:02,197 copying glycopeptidepy/test/test_modification.py -> build/lib/glycopeptidepy/test 2023-09-15T07:46:02,199 copying glycopeptidepy/test/test_uniprot.py -> build/lib/glycopeptidepy/test 2023-09-15T07:46:02,200 copying glycopeptidepy/test/test_fragment.py -> build/lib/glycopeptidepy/test 2023-09-15T07:46:02,202 copying glycopeptidepy/test/test_intervals.py -> build/lib/glycopeptidepy/test 2023-09-15T07:46:02,204 creating build/lib/glycopeptidepy/_c/structure 2023-09-15T07:46:02,205 copying glycopeptidepy/_c/structure/__init__.py -> build/lib/glycopeptidepy/_c/structure 2023-09-15T07:46:02,207 creating build/lib/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,207 copying glycopeptidepy/_c/structure/modification/__init__.py -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,209 creating build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,210 copying glycopeptidepy/_c/structure/fragmentation_strategy/__init__.py -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,212 creating build/lib/glycopeptidepy/io/cv 2023-09-15T07:46:02,213 copying glycopeptidepy/io/cv/term.py -> build/lib/glycopeptidepy/io/cv 2023-09-15T07:46:02,215 copying glycopeptidepy/io/cv/peff.py -> build/lib/glycopeptidepy/io/cv 2023-09-15T07:46:02,218 copying glycopeptidepy/io/cv/__init__.py -> build/lib/glycopeptidepy/io/cv 2023-09-15T07:46:02,219 copying glycopeptidepy/io/cv/uniprot_ptm.py -> build/lib/glycopeptidepy/io/cv 2023-09-15T07:46:02,221 creating build/lib/glycopeptidepy/structure/modification 2023-09-15T07:46:02,222 copying glycopeptidepy/structure/modification/source.py -> build/lib/glycopeptidepy/structure/modification 2023-09-15T07:46:02,225 copying glycopeptidepy/structure/modification/rule.py -> build/lib/glycopeptidepy/structure/modification 2023-09-15T07:46:02,227 copying glycopeptidepy/structure/modification/descriptors.py -> build/lib/glycopeptidepy/structure/modification 2023-09-15T07:46:02,229 copying glycopeptidepy/structure/modification/__init__.py -> build/lib/glycopeptidepy/structure/modification 2023-09-15T07:46:02,230 copying glycopeptidepy/structure/modification/glycosylation.py -> build/lib/glycopeptidepy/structure/modification 2023-09-15T07:46:02,233 copying glycopeptidepy/structure/modification/target.py -> build/lib/glycopeptidepy/structure/modification 2023-09-15T07:46:02,235 copying glycopeptidepy/structure/modification/modification.py -> build/lib/glycopeptidepy/structure/modification 2023-09-15T07:46:02,237 copying glycopeptidepy/structure/modification/utils.py -> build/lib/glycopeptidepy/structure/modification 2023-09-15T07:46:02,239 creating build/lib/glycopeptidepy/structure/sequence 2023-09-15T07:46:02,240 copying glycopeptidepy/structure/sequence/mutable_sequence.py -> build/lib/glycopeptidepy/structure/sequence 2023-09-15T07:46:02,242 copying glycopeptidepy/structure/sequence/base.py -> build/lib/glycopeptidepy/structure/sequence 2023-09-15T07:46:02,244 copying glycopeptidepy/structure/sequence/__init__.py -> build/lib/glycopeptidepy/structure/sequence 2023-09-15T07:46:02,245 copying glycopeptidepy/structure/sequence/implementation.py -> build/lib/glycopeptidepy/structure/sequence 2023-09-15T07:46:02,247 copying glycopeptidepy/structure/sequence/glycosylated_sequence.py -> build/lib/glycopeptidepy/structure/sequence 2023-09-15T07:46:02,249 creating build/lib/glycopeptidepy/structure/fragmentation_strategy 2023-09-15T07:46:02,250 copying glycopeptidepy/structure/fragmentation_strategy/base.py -> build/lib/glycopeptidepy/structure/fragmentation_strategy 2023-09-15T07:46:02,252 copying glycopeptidepy/structure/fragmentation_strategy/__init__.py -> build/lib/glycopeptidepy/structure/fragmentation_strategy 2023-09-15T07:46:02,253 copying glycopeptidepy/structure/fragmentation_strategy/peptide.py -> build/lib/glycopeptidepy/structure/fragmentation_strategy 2023-09-15T07:46:02,256 copying glycopeptidepy/structure/fragmentation_strategy/glycan.py -> build/lib/glycopeptidepy/structure/fragmentation_strategy 2023-09-15T07:46:02,259 creating build/lib/glycopeptidepy/structure/modification/data 2023-09-15T07:46:02,260 copying glycopeptidepy/structure/modification/data/__init__.py -> build/lib/glycopeptidepy/structure/modification/data 2023-09-15T07:46:02,261 copying glycopeptidepy/structure/modification/data/patch_unimod.py -> build/lib/glycopeptidepy/structure/modification/data 2023-09-15T07:46:02,263 copying glycopeptidepy/structure/modification/data/unimod.py -> build/lib/glycopeptidepy/structure/modification/data 2023-09-15T07:46:02,265 running egg_info 2023-09-15T07:46:02,271 writing glycopeptidepy.egg-info/PKG-INFO 2023-09-15T07:46:02,274 writing dependency_links to glycopeptidepy.egg-info/dependency_links.txt 2023-09-15T07:46:02,275 writing requirements to glycopeptidepy.egg-info/requires.txt 2023-09-15T07:46:02,276 writing top-level names to glycopeptidepy.egg-info/top_level.txt 2023-09-15T07:46:02,292 reading manifest file 'glycopeptidepy.egg-info/SOURCES.txt' 2023-09-15T07:46:02,296 reading manifest template 'MANIFEST.in' 2023-09-15T07:46:02,297 warning: no files found matching '*.csv' under directory 'glycopeptidepy/structure/data' 2023-09-15T07:46:02,297 warning: no files found matching '*.json' under directory 'glycopeptidepy/structure/data' 2023-09-15T07:46:02,460 writing manifest file 'glycopeptidepy.egg-info/SOURCES.txt' 2023-09-15T07:46:02,467 copying glycopeptidepy/_c/algorithm.c -> build/lib/glycopeptidepy/_c 2023-09-15T07:46:02,484 copying glycopeptidepy/_c/algorithm.pyx -> build/lib/glycopeptidepy/_c 2023-09-15T07:46:02,486 copying glycopeptidepy/_c/collectiontools.c -> build/lib/glycopeptidepy/_c 2023-09-15T07:46:02,496 copying glycopeptidepy/_c/collectiontools.pxd -> build/lib/glycopeptidepy/_c 2023-09-15T07:46:02,498 copying glycopeptidepy/_c/collectiontools.pyx -> build/lib/glycopeptidepy/_c 2023-09-15T07:46:02,500 copying glycopeptidepy/_c/compat.h -> build/lib/glycopeptidepy/_c 2023-09-15T07:46:02,501 copying glycopeptidepy/_c/compat.pxd -> build/lib/glycopeptidepy/_c 2023-09-15T07:46:02,503 copying glycopeptidepy/_c/count_table.c -> build/lib/glycopeptidepy/_c 2023-09-15T07:46:02,505 copying glycopeptidepy/_c/count_table.pxd -> build/lib/glycopeptidepy/_c 2023-09-15T07:46:02,507 copying glycopeptidepy/_c/count_table.pyx -> build/lib/glycopeptidepy/_c 2023-09-15T07:46:02,510 copying glycopeptidepy/_c/parser.c -> build/lib/glycopeptidepy/_c 2023-09-15T07:46:02,518 copying glycopeptidepy/_c/parser.pxd -> build/lib/glycopeptidepy/_c 2023-09-15T07:46:02,519 copying glycopeptidepy/_c/parser.pyx -> build/lib/glycopeptidepy/_c 2023-09-15T07:46:02,522 copying glycopeptidepy/_c/structure/base.c -> build/lib/glycopeptidepy/_c/structure 2023-09-15T07:46:02,543 copying glycopeptidepy/_c/structure/base.pxd -> build/lib/glycopeptidepy/_c/structure 2023-09-15T07:46:02,545 copying glycopeptidepy/_c/structure/base.pyx -> build/lib/glycopeptidepy/_c/structure 2023-09-15T07:46:02,547 copying glycopeptidepy/_c/structure/constants.c -> build/lib/glycopeptidepy/_c/structure 2023-09-15T07:46:02,553 copying glycopeptidepy/_c/structure/constants.pxd -> build/lib/glycopeptidepy/_c/structure 2023-09-15T07:46:02,555 copying glycopeptidepy/_c/structure/constants.pyx -> build/lib/glycopeptidepy/_c/structure 2023-09-15T07:46:02,556 copying glycopeptidepy/_c/structure/fragment.c -> build/lib/glycopeptidepy/_c/structure 2023-09-15T07:46:02,576 copying glycopeptidepy/_c/structure/fragment.pxd -> build/lib/glycopeptidepy/_c/structure 2023-09-15T07:46:02,578 copying glycopeptidepy/_c/structure/fragment.pyx -> build/lib/glycopeptidepy/_c/structure 2023-09-15T07:46:02,581 copying glycopeptidepy/_c/structure/glycan.c -> build/lib/glycopeptidepy/_c/structure 2023-09-15T07:46:02,593 copying glycopeptidepy/_c/structure/glycan.pxd -> build/lib/glycopeptidepy/_c/structure 2023-09-15T07:46:02,595 copying glycopeptidepy/_c/structure/glycan.pyx -> build/lib/glycopeptidepy/_c/structure 2023-09-15T07:46:02,597 copying glycopeptidepy/_c/structure/sequence_methods.c -> build/lib/glycopeptidepy/_c/structure 2023-09-15T07:46:02,611 copying glycopeptidepy/_c/structure/sequence_methods.pxd -> build/lib/glycopeptidepy/_c/structure 2023-09-15T07:46:02,612 copying glycopeptidepy/_c/structure/sequence_methods.pyx -> build/lib/glycopeptidepy/_c/structure 2023-09-15T07:46:02,615 copying glycopeptidepy/_c/structure/modification/modification.c -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,622 copying glycopeptidepy/_c/structure/modification/modification.pxd -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,624 copying glycopeptidepy/_c/structure/modification/modification.pyx -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,626 copying glycopeptidepy/_c/structure/modification/rule.c -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,637 copying glycopeptidepy/_c/structure/modification/rule.pxd -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,638 copying glycopeptidepy/_c/structure/modification/rule.pyx -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,640 copying glycopeptidepy/_c/structure/modification/source.c -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,648 copying glycopeptidepy/_c/structure/modification/source.pxd -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,650 copying glycopeptidepy/_c/structure/modification/source.pyx -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,652 copying glycopeptidepy/_c/structure/modification/target.pyx -> build/lib/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,654 copying glycopeptidepy/_c/structure/fragmentation_strategy/base.c -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,661 copying glycopeptidepy/_c/structure/fragmentation_strategy/base.pxd -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,663 copying glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,665 copying glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,687 copying glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pxd -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,689 copying glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,692 copying glycopeptidepy/_c/structure/fragmentation_strategy/peptide.c -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,713 copying glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pxd -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,715 copying glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx -> build/lib/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,718 copying glycopeptidepy/structure/modification/data/ProteinProspectorModifications-for_gly2.csv -> build/lib/glycopeptidepy/structure/modification/data 2023-09-15T07:46:02,720 copying glycopeptidepy/structure/modification/data/unimod.json -> build/lib/glycopeptidepy/structure/modification/data 2023-09-15T07:46:02,765 installing to build/bdist.linux-armv7l/wheel 2023-09-15T07:46:02,766 running install 2023-09-15T07:46:02,794 running install_lib 2023-09-15T07:46:02,802 creating build/bdist.linux-armv7l 2023-09-15T07:46:02,802 creating build/bdist.linux-armv7l/wheel 2023-09-15T07:46:02,804 creating build/bdist.linux-armv7l/wheel/glycopeptidepy 2023-09-15T07:46:02,805 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-15T07:46:02,806 copying build/lib/glycopeptidepy/_c/count_table.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-15T07:46:02,808 copying build/lib/glycopeptidepy/_c/compat.h -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-15T07:46:02,810 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-15T07:46:02,811 copying build/lib/glycopeptidepy/_c/structure/sequence_methods.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-15T07:46:02,825 copying build/lib/glycopeptidepy/_c/structure/fragment.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-15T07:46:02,860 copying build/lib/glycopeptidepy/_c/structure/fragment.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-15T07:46:02,863 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,865 copying build/lib/glycopeptidepy/_c/structure/modification/source.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,867 copying build/lib/glycopeptidepy/_c/structure/modification/rule.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,878 copying build/lib/glycopeptidepy/_c/structure/modification/source.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,879 copying build/lib/glycopeptidepy/_c/structure/modification/rule.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,882 copying build/lib/glycopeptidepy/_c/structure/modification/modification.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,889 copying build/lib/glycopeptidepy/_c/structure/modification/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,890 copying build/lib/glycopeptidepy/_c/structure/modification/modification.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,892 copying build/lib/glycopeptidepy/_c/structure/modification/source.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,899 copying build/lib/glycopeptidepy/_c/structure/modification/rule.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,901 copying build/lib/glycopeptidepy/_c/structure/modification/target.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,903 copying build/lib/glycopeptidepy/_c/structure/modification/modification.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/modification 2023-09-15T07:46:02,904 copying build/lib/glycopeptidepy/_c/structure/base.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-15T07:46:02,906 copying build/lib/glycopeptidepy/_c/structure/base.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-15T07:46:02,923 copying build/lib/glycopeptidepy/_c/structure/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-15T07:46:02,925 copying build/lib/glycopeptidepy/_c/structure/sequence_methods.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-15T07:46:02,927 copying build/lib/glycopeptidepy/_c/structure/glycan.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-15T07:46:02,929 copying build/lib/glycopeptidepy/_c/structure/fragment.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-15T07:46:02,931 copying build/lib/glycopeptidepy/_c/structure/glycan.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-15T07:46:02,933 copying build/lib/glycopeptidepy/_c/structure/sequence_methods.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-15T07:46:02,935 copying build/lib/glycopeptidepy/_c/structure/constants.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-15T07:46:02,936 copying build/lib/glycopeptidepy/_c/structure/constants.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-15T07:46:02,939 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,939 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,942 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/base.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,944 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/base.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,951 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,952 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,954 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,956 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,959 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/peptide.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,977 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:02,980 copying build/lib/glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure/fragmentation_strategy 2023-09-15T07:46:03,003 copying build/lib/glycopeptidepy/_c/structure/constants.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-15T07:46:03,009 copying build/lib/glycopeptidepy/_c/structure/base.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-15T07:46:03,011 copying build/lib/glycopeptidepy/_c/structure/glycan.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c/structure 2023-09-15T07:46:03,023 copying build/lib/glycopeptidepy/_c/collectiontools.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-15T07:46:03,025 copying build/lib/glycopeptidepy/_c/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-15T07:46:03,026 copying build/lib/glycopeptidepy/_c/parser.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-15T07:46:03,028 copying build/lib/glycopeptidepy/_c/parser.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-15T07:46:03,030 copying build/lib/glycopeptidepy/_c/count_table.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-15T07:46:03,032 copying build/lib/glycopeptidepy/_c/compat.pxd -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-15T07:46:03,033 copying build/lib/glycopeptidepy/_c/algorithm.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-15T07:46:03,036 copying build/lib/glycopeptidepy/_c/collectiontools.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-15T07:46:03,038 copying build/lib/glycopeptidepy/_c/count_table.pyx -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-15T07:46:03,040 copying build/lib/glycopeptidepy/_c/collectiontools.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-15T07:46:03,048 copying build/lib/glycopeptidepy/_c/algorithm.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-15T07:46:03,061 copying build/lib/glycopeptidepy/_c/parser.c -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-15T07:46:03,069 copying build/lib/glycopeptidepy/_c/cythonize.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/_c 2023-09-15T07:46:03,071 copying build/lib/glycopeptidepy/version.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy 2023-09-15T07:46:03,073 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/utils 2023-09-15T07:46:03,074 copying build/lib/glycopeptidepy/utils/iterators.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils 2023-09-15T07:46:03,076 copying build/lib/glycopeptidepy/utils/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils 2023-09-15T07:46:03,078 copying build/lib/glycopeptidepy/utils/memoize.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils 2023-09-15T07:46:03,079 copying build/lib/glycopeptidepy/utils/sequence_tree.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils 2023-09-15T07:46:03,082 copying build/lib/glycopeptidepy/utils/collectiontools.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils 2023-09-15T07:46:03,084 copying build/lib/glycopeptidepy/utils/intervals.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/utils 2023-09-15T07:46:03,087 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/io 2023-09-15T07:46:03,088 copying build/lib/glycopeptidepy/io/uniprot.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io 2023-09-15T07:46:03,090 copying build/lib/glycopeptidepy/io/fasta.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io 2023-09-15T07:46:03,093 copying build/lib/glycopeptidepy/io/annotation.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io 2023-09-15T07:46:03,096 copying build/lib/glycopeptidepy/io/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io 2023-09-15T07:46:03,097 copying build/lib/glycopeptidepy/io/utils.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io 2023-09-15T07:46:03,100 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv 2023-09-15T07:46:03,101 copying build/lib/glycopeptidepy/io/cv/term.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv 2023-09-15T07:46:03,103 copying build/lib/glycopeptidepy/io/cv/peff.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv 2023-09-15T07:46:03,106 copying build/lib/glycopeptidepy/io/cv/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv 2023-09-15T07:46:03,107 copying build/lib/glycopeptidepy/io/cv/uniprot_ptm.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io/cv 2023-09-15T07:46:03,109 copying build/lib/glycopeptidepy/io/nextprot.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/io 2023-09-15T07:46:03,112 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-15T07:46:03,113 copying build/lib/glycopeptidepy/structure/terminal_group.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-15T07:46:03,115 copying build/lib/glycopeptidepy/structure/base.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-15T07:46:03,117 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification 2023-09-15T07:46:03,118 copying build/lib/glycopeptidepy/structure/modification/source.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification 2023-09-15T07:46:03,121 copying build/lib/glycopeptidepy/structure/modification/rule.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification 2023-09-15T07:46:03,123 copying build/lib/glycopeptidepy/structure/modification/descriptors.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification 2023-09-15T07:46:03,125 copying build/lib/glycopeptidepy/structure/modification/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification 2023-09-15T07:46:03,127 copying build/lib/glycopeptidepy/structure/modification/glycosylation.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification 2023-09-15T07:46:03,129 copying build/lib/glycopeptidepy/structure/modification/target.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification 2023-09-15T07:46:03,132 copying build/lib/glycopeptidepy/structure/modification/modification.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification 2023-09-15T07:46:03,134 copying build/lib/glycopeptidepy/structure/modification/utils.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification 2023-09-15T07:46:03,136 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data 2023-09-15T07:46:03,137 copying build/lib/glycopeptidepy/structure/modification/data/unimod.json -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data 2023-09-15T07:46:03,166 copying build/lib/glycopeptidepy/structure/modification/data/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data 2023-09-15T07:46:03,169 copying build/lib/glycopeptidepy/structure/modification/data/ProteinProspectorModifications-for_gly2.csv -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data 2023-09-15T07:46:03,171 copying build/lib/glycopeptidepy/structure/modification/data/patch_unimod.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data 2023-09-15T07:46:03,174 copying build/lib/glycopeptidepy/structure/modification/data/unimod.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/modification/data 2023-09-15T07:46:03,177 copying build/lib/glycopeptidepy/structure/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-15T07:46:03,180 copying build/lib/glycopeptidepy/structure/residue.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-15T07:46:03,183 copying build/lib/glycopeptidepy/structure/constants.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-15T07:46:03,186 copying build/lib/glycopeptidepy/structure/parser.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-15T07:46:03,189 copying build/lib/glycopeptidepy/structure/fragment.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-15T07:46:03,193 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence 2023-09-15T07:46:03,195 copying build/lib/glycopeptidepy/structure/sequence/mutable_sequence.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence 2023-09-15T07:46:03,198 copying build/lib/glycopeptidepy/structure/sequence/base.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence 2023-09-15T07:46:03,201 copying build/lib/glycopeptidepy/structure/sequence/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence 2023-09-15T07:46:03,204 copying build/lib/glycopeptidepy/structure/sequence/implementation.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence 2023-09-15T07:46:03,207 copying build/lib/glycopeptidepy/structure/sequence/glycosylated_sequence.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/sequence 2023-09-15T07:46:03,210 copying build/lib/glycopeptidepy/structure/sequence_composition.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-15T07:46:03,214 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy 2023-09-15T07:46:03,215 copying build/lib/glycopeptidepy/structure/fragmentation_strategy/base.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy 2023-09-15T07:46:03,218 copying build/lib/glycopeptidepy/structure/fragmentation_strategy/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy 2023-09-15T07:46:03,221 copying build/lib/glycopeptidepy/structure/fragmentation_strategy/peptide.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy 2023-09-15T07:46:03,224 copying build/lib/glycopeptidepy/structure/fragmentation_strategy/glycan.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure/fragmentation_strategy 2023-09-15T07:46:03,229 copying build/lib/glycopeptidepy/structure/glycan.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-15T07:46:03,232 copying build/lib/glycopeptidepy/structure/composition.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/structure 2023-09-15T07:46:03,235 copying build/lib/glycopeptidepy/enzyme.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy 2023-09-15T07:46:03,238 copying build/lib/glycopeptidepy/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy 2023-09-15T07:46:03,241 copying build/lib/glycopeptidepy/algorithm.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy 2023-09-15T07:46:03,245 creating build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-15T07:46:03,247 copying build/lib/glycopeptidepy/test/test_algorithms.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-15T07:46:03,251 copying build/lib/glycopeptidepy/test/common.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-15T07:46:03,254 copying build/lib/glycopeptidepy/test/test_sequence.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-15T07:46:03,258 copying build/lib/glycopeptidepy/test/test_residue.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-15T07:46:03,261 copying build/lib/glycopeptidepy/test/test_sequence_composition.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-15T07:46:03,264 copying build/lib/glycopeptidepy/test/__init__.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-15T07:46:03,267 copying build/lib/glycopeptidepy/test/test_fasta.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-15T07:46:03,271 copying build/lib/glycopeptidepy/test/test_enzyme.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-15T07:46:03,273 copying build/lib/glycopeptidepy/test/test_fragmentation_strategy.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-15T07:46:03,276 copying build/lib/glycopeptidepy/test/test_utils.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-15T07:46:03,280 copying build/lib/glycopeptidepy/test/test_modification.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-15T07:46:03,283 copying build/lib/glycopeptidepy/test/test_uniprot.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-15T07:46:03,286 copying build/lib/glycopeptidepy/test/test_fragment.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-15T07:46:03,290 copying build/lib/glycopeptidepy/test/test_intervals.py -> build/bdist.linux-armv7l/wheel/glycopeptidepy/test 2023-09-15T07:46:03,295 running install_egg_info 2023-09-15T07:46:03,322 Copying glycopeptidepy.egg-info to build/bdist.linux-armv7l/wheel/glycopeptidepy-0.0.13-py3.11.egg-info 2023-09-15T07:46:03,364 running install_scripts 2023-09-15T07:46:03,376 creating build/bdist.linux-armv7l/wheel/glycopeptidepy-0.0.13.dist-info/WHEEL 2023-09-15T07:46:03,379 creating '/tmp/pip-wheel-4ei_63k7/.tmp-icuxbl0h/glycopeptidepy-0.0.13-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-15T07:46:03,381 adding 'glycopeptidepy/__init__.py' 2023-09-15T07:46:03,384 adding 'glycopeptidepy/algorithm.py' 2023-09-15T07:46:03,387 adding 'glycopeptidepy/enzyme.py' 2023-09-15T07:46:03,388 adding 'glycopeptidepy/version.py' 2023-09-15T07:46:03,390 adding 'glycopeptidepy/_c/__init__.py' 2023-09-15T07:46:03,447 adding 'glycopeptidepy/_c/algorithm.c' 2023-09-15T07:46:03,455 adding 'glycopeptidepy/_c/algorithm.pyx' 2023-09-15T07:46:03,492 adding 'glycopeptidepy/_c/collectiontools.c' 2023-09-15T07:46:03,497 adding 'glycopeptidepy/_c/collectiontools.pxd' 2023-09-15T07:46:03,498 adding 'glycopeptidepy/_c/collectiontools.pyx' 2023-09-15T07:46:03,500 adding 'glycopeptidepy/_c/compat.h' 2023-09-15T07:46:03,502 adding 'glycopeptidepy/_c/compat.pxd' 2023-09-15T07:46:03,503 adding 'glycopeptidepy/_c/count_table.c' 2023-09-15T07:46:03,505 adding 'glycopeptidepy/_c/count_table.pxd' 2023-09-15T07:46:03,508 adding 'glycopeptidepy/_c/count_table.pyx' 2023-09-15T07:46:03,510 adding 'glycopeptidepy/_c/cythonize.py' 2023-09-15T07:46:03,540 adding 'glycopeptidepy/_c/parser.c' 2023-09-15T07:46:03,545 adding 'glycopeptidepy/_c/parser.pxd' 2023-09-15T07:46:03,547 adding 'glycopeptidepy/_c/parser.pyx' 2023-09-15T07:46:03,549 adding 'glycopeptidepy/_c/structure/__init__.py' 2023-09-15T07:46:03,603 adding 'glycopeptidepy/_c/structure/base.c' 2023-09-15T07:46:03,612 adding 'glycopeptidepy/_c/structure/base.pxd' 2023-09-15T07:46:03,614 adding 'glycopeptidepy/_c/structure/base.pyx' 2023-09-15T07:46:03,634 adding 'glycopeptidepy/_c/structure/constants.c' 2023-09-15T07:46:03,637 adding 'glycopeptidepy/_c/structure/constants.pxd' 2023-09-15T07:46:03,639 adding 'glycopeptidepy/_c/structure/constants.pyx' 2023-09-15T07:46:03,739 adding 'glycopeptidepy/_c/structure/fragment.c' 2023-09-15T07:46:03,751 adding 'glycopeptidepy/_c/structure/fragment.pxd' 2023-09-15T07:46:03,755 adding 'glycopeptidepy/_c/structure/fragment.pyx' 2023-09-15T07:46:03,795 adding 'glycopeptidepy/_c/structure/glycan.c' 2023-09-15T07:46:03,801 adding 'glycopeptidepy/_c/structure/glycan.pxd' 2023-09-15T07:46:03,804 adding 'glycopeptidepy/_c/structure/glycan.pyx' 2023-09-15T07:46:03,858 adding 'glycopeptidepy/_c/structure/sequence_methods.c' 2023-09-15T07:46:03,866 adding 'glycopeptidepy/_c/structure/sequence_methods.pxd' 2023-09-15T07:46:03,870 adding 'glycopeptidepy/_c/structure/sequence_methods.pyx' 2023-09-15T07:46:03,872 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/__init__.py' 2023-09-15T07:46:03,898 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/base.c' 2023-09-15T07:46:03,903 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/base.pxd' 2023-09-15T07:46:03,904 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/base.pyx' 2023-09-15T07:46:03,988 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/glycan.c' 2023-09-15T07:46:04,001 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pxd' 2023-09-15T07:46:04,005 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/glycan.pyx' 2023-09-15T07:46:04,079 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/peptide.c' 2023-09-15T07:46:04,091 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pxd' 2023-09-15T07:46:04,094 adding 'glycopeptidepy/_c/structure/fragmentation_strategy/peptide.pyx' 2023-09-15T07:46:04,096 adding 'glycopeptidepy/_c/structure/modification/__init__.py' 2023-09-15T07:46:04,121 adding 'glycopeptidepy/_c/structure/modification/modification.c' 2023-09-15T07:46:04,125 adding 'glycopeptidepy/_c/structure/modification/modification.pxd' 2023-09-15T07:46:04,127 adding 'glycopeptidepy/_c/structure/modification/modification.pyx' 2023-09-15T07:46:04,164 adding 'glycopeptidepy/_c/structure/modification/rule.c' 2023-09-15T07:46:04,170 adding 'glycopeptidepy/_c/structure/modification/rule.pxd' 2023-09-15T07:46:04,172 adding 'glycopeptidepy/_c/structure/modification/rule.pyx' 2023-09-15T07:46:04,197 adding 'glycopeptidepy/_c/structure/modification/source.c' 2023-09-15T07:46:04,201 adding 'glycopeptidepy/_c/structure/modification/source.pxd' 2023-09-15T07:46:04,203 adding 'glycopeptidepy/_c/structure/modification/source.pyx' 2023-09-15T07:46:04,205 adding 'glycopeptidepy/_c/structure/modification/target.pyx' 2023-09-15T07:46:04,207 adding 'glycopeptidepy/io/__init__.py' 2023-09-15T07:46:04,209 adding 'glycopeptidepy/io/annotation.py' 2023-09-15T07:46:04,213 adding 'glycopeptidepy/io/fasta.py' 2023-09-15T07:46:04,215 adding 'glycopeptidepy/io/nextprot.py' 2023-09-15T07:46:04,218 adding 'glycopeptidepy/io/uniprot.py' 2023-09-15T07:46:04,220 adding 'glycopeptidepy/io/utils.py' 2023-09-15T07:46:04,222 adding 'glycopeptidepy/io/cv/__init__.py' 2023-09-15T07:46:04,224 adding 'glycopeptidepy/io/cv/peff.py' 2023-09-15T07:46:04,226 adding 'glycopeptidepy/io/cv/term.py' 2023-09-15T07:46:04,227 adding 'glycopeptidepy/io/cv/uniprot_ptm.py' 2023-09-15T07:46:04,230 adding 'glycopeptidepy/structure/__init__.py' 2023-09-15T07:46:04,231 adding 'glycopeptidepy/structure/base.py' 2023-09-15T07:46:04,233 adding 'glycopeptidepy/structure/composition.py' 2023-09-15T07:46:04,234 adding 'glycopeptidepy/structure/constants.py' 2023-09-15T07:46:04,237 adding 'glycopeptidepy/structure/fragment.py' 2023-09-15T07:46:04,240 adding 'glycopeptidepy/structure/glycan.py' 2023-09-15T07:46:04,242 adding 'glycopeptidepy/structure/parser.py' 2023-09-15T07:46:04,245 adding 'glycopeptidepy/structure/residue.py' 2023-09-15T07:46:04,247 adding 'glycopeptidepy/structure/sequence_composition.py' 2023-09-15T07:46:04,249 adding 'glycopeptidepy/structure/terminal_group.py' 2023-09-15T07:46:04,251 adding 'glycopeptidepy/structure/fragmentation_strategy/__init__.py' 2023-09-15T07:46:04,253 adding 'glycopeptidepy/structure/fragmentation_strategy/base.py' 2023-09-15T07:46:04,257 adding 'glycopeptidepy/structure/fragmentation_strategy/glycan.py' 2023-09-15T07:46:04,261 adding 'glycopeptidepy/structure/fragmentation_strategy/peptide.py' 2023-09-15T07:46:04,263 adding 'glycopeptidepy/structure/modification/__init__.py' 2023-09-15T07:46:04,265 adding 'glycopeptidepy/structure/modification/descriptors.py' 2023-09-15T07:46:04,267 adding 'glycopeptidepy/structure/modification/glycosylation.py' 2023-09-15T07:46:04,269 adding 'glycopeptidepy/structure/modification/modification.py' 2023-09-15T07:46:04,273 adding 'glycopeptidepy/structure/modification/rule.py' 2023-09-15T07:46:04,276 adding 'glycopeptidepy/structure/modification/source.py' 2023-09-15T07:46:04,278 adding 'glycopeptidepy/structure/modification/target.py' 2023-09-15T07:46:04,280 adding 'glycopeptidepy/structure/modification/utils.py' 2023-09-15T07:46:04,282 adding 'glycopeptidepy/structure/modification/data/ProteinProspectorModifications-for_gly2.csv' 2023-09-15T07:46:04,284 adding 'glycopeptidepy/structure/modification/data/__init__.py' 2023-09-15T07:46:04,285 adding 'glycopeptidepy/structure/modification/data/patch_unimod.py' 2023-09-15T07:46:04,349 adding 'glycopeptidepy/structure/modification/data/unimod.json' 2023-09-15T07:46:04,367 adding 'glycopeptidepy/structure/modification/data/unimod.py' 2023-09-15T07:46:04,369 adding 'glycopeptidepy/structure/sequence/__init__.py' 2023-09-15T07:46:04,372 adding 'glycopeptidepy/structure/sequence/base.py' 2023-09-15T07:46:04,374 adding 'glycopeptidepy/structure/sequence/glycosylated_sequence.py' 2023-09-15T07:46:04,376 adding 'glycopeptidepy/structure/sequence/implementation.py' 2023-09-15T07:46:04,378 adding 'glycopeptidepy/structure/sequence/mutable_sequence.py' 2023-09-15T07:46:04,380 adding 'glycopeptidepy/test/__init__.py' 2023-09-15T07:46:04,382 adding 'glycopeptidepy/test/common.py' 2023-09-15T07:46:04,383 adding 'glycopeptidepy/test/test_algorithms.py' 2023-09-15T07:46:04,385 adding 'glycopeptidepy/test/test_enzyme.py' 2023-09-15T07:46:04,387 adding 'glycopeptidepy/test/test_fasta.py' 2023-09-15T07:46:04,389 adding 'glycopeptidepy/test/test_fragment.py' 2023-09-15T07:46:04,391 adding 'glycopeptidepy/test/test_fragmentation_strategy.py' 2023-09-15T07:46:04,392 adding 'glycopeptidepy/test/test_intervals.py' 2023-09-15T07:46:04,394 adding 'glycopeptidepy/test/test_modification.py' 2023-09-15T07:46:04,396 adding 'glycopeptidepy/test/test_residue.py' 2023-09-15T07:46:04,398 adding 'glycopeptidepy/test/test_sequence.py' 2023-09-15T07:46:04,399 adding 'glycopeptidepy/test/test_sequence_composition.py' 2023-09-15T07:46:04,401 adding 'glycopeptidepy/test/test_uniprot.py' 2023-09-15T07:46:04,402 adding 'glycopeptidepy/test/test_utils.py' 2023-09-15T07:46:04,404 adding 'glycopeptidepy/utils/__init__.py' 2023-09-15T07:46:04,406 adding 'glycopeptidepy/utils/collectiontools.py' 2023-09-15T07:46:04,409 adding 'glycopeptidepy/utils/intervals.py' 2023-09-15T07:46:04,410 adding 'glycopeptidepy/utils/iterators.py' 2023-09-15T07:46:04,412 adding 'glycopeptidepy/utils/memoize.py' 2023-09-15T07:46:04,413 adding 'glycopeptidepy/utils/sequence_tree.py' 2023-09-15T07:46:04,416 adding 'glycopeptidepy-0.0.13.dist-info/METADATA' 2023-09-15T07:46:04,417 adding 'glycopeptidepy-0.0.13.dist-info/WHEEL' 2023-09-15T07:46:04,418 adding 'glycopeptidepy-0.0.13.dist-info/top_level.txt' 2023-09-15T07:46:04,421 adding 'glycopeptidepy-0.0.13.dist-info/RECORD' 2023-09-15T07:46:04,437 removing build/bdist.linux-armv7l/wheel 2023-09-15T07:46:04,472 *************************************************************************** 2023-09-15T07:46:04,472 WARNING: The C extension could not be compiled, speedups are not enabled. 2023-09-15T07:46:04,473 Plain-Python build succeeded. 2023-09-15T07:46:04,474 *************************************************************************** 2023-09-15T07:46:04,743 Building wheel for glycopeptidepy (pyproject.toml): finished with status 'done' 2023-09-15T07:46:04,775 Created wheel for glycopeptidepy: filename=glycopeptidepy-0.0.13-py3-none-any.whl size=1343655 sha256=d82db09cb923fe342deb4b776e8e734c364a5466538c7a305ce2ae62ab4425c8 2023-09-15T07:46:04,776 Stored in directory: /tmp/pip-ephem-wheel-cache-mrrqmn4c/wheels/71/b3/0a/50a70b9900ba2cc3a9c700a8b0657ad2f38fa3011cea300e30 2023-09-15T07:46:04,788 Successfully built glycopeptidepy 2023-09-15T07:46:04,833 Removed build tracker: '/tmp/pip-build-tracker-bmq3z1g0'