2023-09-15T09:18:51,976 Created temporary directory: /tmp/pip-build-tracker-ss4zf_6h 2023-09-15T09:18:51,977 Initialized build tracking at /tmp/pip-build-tracker-ss4zf_6h 2023-09-15T09:18:51,977 Created build tracker: /tmp/pip-build-tracker-ss4zf_6h 2023-09-15T09:18:51,977 Entered build tracker: /tmp/pip-build-tracker-ss4zf_6h 2023-09-15T09:18:51,978 Created temporary directory: /tmp/pip-wheel-5n6vmon6 2023-09-15T09:18:51,981 Created temporary directory: /tmp/pip-ephem-wheel-cache-0ttr_6bb 2023-09-15T09:18:52,005 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-15T09:18:52,009 2 location(s) to search for versions of gemmi: 2023-09-15T09:18:52,009 * https://pypi.org/simple/gemmi/ 2023-09-15T09:18:52,009 * https://www.piwheels.org/simple/gemmi/ 2023-09-15T09:18:52,009 Fetching project page and analyzing links: https://pypi.org/simple/gemmi/ 2023-09-15T09:18:52,010 Getting page https://pypi.org/simple/gemmi/ 2023-09-15T09:18:52,011 Found index url https://pypi.org/simple/ 2023-09-15T09:18:52,272 Fetched page https://pypi.org/simple/gemmi/ as application/vnd.pypi.simple.v1+json 2023-09-15T09:18:52,371 Found link https://files.pythonhosted.org/packages/3d/74/21e7705118e1f4ac86f03f99a71dc2ba33b8a73fef727be638ee054886e6/gemmi-0.1.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.2 2023-09-15T09:18:52,372 Found link https://files.pythonhosted.org/packages/13/89/4369460dd34f3e7f46c4ec44765cf9f79e392cf3faa8b3792285db77c61f/gemmi-0.1.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.3 2023-09-15T09:18:52,373 Found link https://files.pythonhosted.org/packages/fb/18/819ab7731075516bb422586a97a4e59313259fa60e49642e26859fe0ef76/gemmi-0.1.4.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.4 2023-09-15T09:18:52,373 Found link https://files.pythonhosted.org/packages/d4/d5/85a0fecb747b415fcc6e3fee9f48edab936e6339ec50736abe1dcfc0d460/gemmi-0.1.5.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.5 2023-09-15T09:18:52,374 Found link https://files.pythonhosted.org/packages/e5/96/664c971ddae50eb00ff9ee39ce8db4e3f481a1ca740583081a1a84146d39/gemmi-0.1.6.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.6 2023-09-15T09:18:52,375 Found link https://files.pythonhosted.org/packages/e5/41/e51478a35846a23ef2764d9a36ced90e63eafd49c7a4c85559b0566c3884/gemmi-0.1.7.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.1.7 2023-09-15T09:18:52,376 Found link https://files.pythonhosted.org/packages/20/bd/36cb4b950bbe78d5a4e3fd1c127100894fc97d059db57771fa1fd1ce9f2b/gemmi-0.2.0.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.0 2023-09-15T09:18:52,376 Found link https://files.pythonhosted.org/packages/d1/2a/7cb4d0fbc88af06fe42971bfebbbefa670a156b396a9d59fb428809977c4/gemmi-0.2.1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.1 2023-09-15T09:18:52,377 Found link https://files.pythonhosted.org/packages/09/bd/2d15c8e32c28b11d3f781293a3c828834874bf0c17d193a65a0ab4e781df/gemmi-0.2.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.2 2023-09-15T09:18:52,378 Found link https://files.pythonhosted.org/packages/2b/d5/15ac654339e17b64f6c4c3d07cea51f6f329eeee1ba01ad58536279fd400/gemmi-0.2.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.3 2023-09-15T09:18:52,379 Found link https://files.pythonhosted.org/packages/32/fa/781063687c6e47133a8c39b142a10573546153dde6f5558e9802690bb184/gemmi-0.2.4.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.4 2023-09-15T09:18:52,379 Found link https://files.pythonhosted.org/packages/8b/d5/92f78ebb4734212283301730b193bd44f3ea74161bfd413939a88e976f67/gemmi-0.2.7.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.7 2023-09-15T09:18:52,380 Found link https://files.pythonhosted.org/packages/4b/4b/51d357ef35fcf27a5325426b9326498ab1482be37efbc06a92202f921407/gemmi-0.2.8.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.2.8 2023-09-15T09:18:52,381 Found link https://files.pythonhosted.org/packages/e0/9c/6ea8ea2bbda7ab9eb8b548d899cc328aabd9cf04c720e1cd3287fcd00544/gemmi-0.3.0.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.0 2023-09-15T09:18:52,382 Found link https://files.pythonhosted.org/packages/e5/ed/6a91e0fe126a30842c93bfa3865dab81d8383a12026c034edfdf5bf60f85/gemmi-0.3.1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.1 2023-09-15T09:18:52,383 Found link https://files.pythonhosted.org/packages/5d/86/6cef13dcfd9b5f3101e826f35fd54088942496489b9307480185fe63d2ed/gemmi-0.3.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.2 2023-09-15T09:18:52,383 Found link https://files.pythonhosted.org/packages/af/9d/ce0bdf384249da75e4584b624f5a144366a3c8eceff2dff19236aff08dd1/gemmi-0.3.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.3 2023-09-15T09:18:52,384 Found link https://files.pythonhosted.org/packages/b3/b8/1f41f9a0849c5011cb890f89b6548c8dec1b52ee4bf28cb0ebe3728016e9/gemmi-0.3.4.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.4 2023-09-15T09:18:52,384 Found link https://files.pythonhosted.org/packages/f4/f0/f4cd4d29e53707efccb2e6d4b2c185851dc1ef02f7aa041b9803fb1a8590/gemmi-0.3.5.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.5 2023-09-15T09:18:52,385 Found link https://files.pythonhosted.org/packages/39/b1/9ca0ad395150af606cf85a2e45c2dfaab02492d36ff264efdcf25f7479c1/gemmi-0.3.6.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.6 2023-09-15T09:18:52,386 Found link https://files.pythonhosted.org/packages/99/ff/0da30f43421b952256ba77edf0eee9bc0711715a4687489ee33037a1f132/gemmi-0.3.7.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.7 2023-09-15T09:18:52,386 Found link https://files.pythonhosted.org/packages/06/4f/5e2e02aa93bcdf27b54f810ecda6e3d08b962d8ef27c9fa731f04523dc80/gemmi-0.3.8.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.3.8 2023-09-15T09:18:52,387 Found link https://files.pythonhosted.org/packages/c0/4d/7567aed9911e6f62021508d72deae27d7f1e5dcb41032c4d642c01158408/gemmi-0.4.0.post1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.0.post1 2023-09-15T09:18:52,387 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f5/da/3fb440c7b946febcc4fdb3f4928b1e93b2627ccdf26d69962f3c05b8f077/gemmi-0.4.1-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,388 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/88/8c/72cd48a1e89ad92f24e67d15545b9e3f478f256fb4729dbbb4985a0efe2f/gemmi-0.4.1-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,389 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cb/84/0162cc2197241200740655ebe6cfd33342ddb152feca089f98aab91f56b0/gemmi-0.4.1-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,389 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0f/3a/c69ec458774b60d61a929ac2357d0b9c0a0b5187e55cdb75e138cefee2d3/gemmi-0.4.1-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,390 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c2/a2/55410bfd6be3391475c2a005fcde251f843e0d117707dacb07bb880d2b21/gemmi-0.4.1-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,391 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/a4/361f66459b444340a29c1dbeb81918dccfab580f92752571a361b53c80fe/gemmi-0.4.1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,391 Found link https://files.pythonhosted.org/packages/2f/d5/4ca93e1691bd8cb2d1e06ce4ff816eca300aa4e09416caf45bbb6451f013/gemmi-0.4.1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.1 2023-09-15T09:18:52,392 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/22/03/599bf3752327fdbc408133daf5d6a7b950d72c4d81f20d8d3b2d8e95be85/gemmi-0.4.2-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,393 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c4/aa/f03b573d7333211fda34ad2c7dddbb4b7310fcf9caf7e938318208819049/gemmi-0.4.2-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,393 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/34/eb/d55b627cd8cb0f9bd3fc076afdd8b3b999316d6c4c24b6b703b97730ffab/gemmi-0.4.2-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,394 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/da/6a/fe1a65806633ea2129507b0f8b4034afdbf383e474a12152839ee50a52eb/gemmi-0.4.2-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,395 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/10/59/a4976acb0891bc600c161f08c341666daf419885f07a105e335e1aeeecb7/gemmi-0.4.2-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,395 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bd/f9/0e3c3e3cbb2116fa23a1fe815542a971a5775cd7ada9d02ffd5d58fcde85/gemmi-0.4.2-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,396 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f3/95/85635908935957b4ccc1700dafdcd0c309e00a4a3291aa7a8d6c65a5f089/gemmi-0.4.2-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,396 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bf/5e/2dcb2454003be5505eb7a75b5eecde74486d2a1bea2f189fc30c749076e6/gemmi-0.4.2-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,397 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3c/8d/055161b661f3dcebbd1cfa3c55ba02ab7f434d87147481b3566080a4ccac/gemmi-0.4.2-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,397 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ce/82/a45cb30c350b56f4dc628986b84b91310b88e1b2ac73ae3b37c3a1ac8585/gemmi-0.4.2-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,398 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9a/39/784a739b8d83175667ef1cc85a53acbe79b9437292031225b3ed552bc035/gemmi-0.4.2-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,399 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5b/62/8911a99982bc95e629f41a7096f0f907cf4b001ed6c0087e0a2763c943e1/gemmi-0.4.2-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,399 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/95/9b/d75a5882a9bb13d47e99e0552b516e330004b411e4547b37a3743c74976b/gemmi-0.4.2-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,400 Found link https://files.pythonhosted.org/packages/a4/ac/b850ac03ad0f899c0c8f699af60b5c515291c74470601e3b12803d6fca2e/gemmi-0.4.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.2 2023-09-15T09:18:52,401 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/23/72/c5e726b2722bdfbbb82847582ff64caaf60f70ca38adf11946561fbc75ce/gemmi-0.4.3-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,401 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b7/cf/5a9f3534db7e32658104b69e8a631c4fcf9a4bff7b8d38dca572bb6ed5d7/gemmi-0.4.3-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,402 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d4/8b/c55499a4d0d2a155c4c4ce220a2a942f0026909f4ec849609fc6688eb5a4/gemmi-0.4.3-cp35-cp35m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,403 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c3/c4/d3239cd44ce93e14454e2f6596a723f5245776fe822238ac0473ef6d81d4/gemmi-0.4.3-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,403 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7c/b9/4821a0951160692524e8394629b952337ad0fbe111b5cf26dc56a9c8e59e/gemmi-0.4.3-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,404 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6a/52/e2813c31a8d080649737308823e85d17324defb683a61e853beea00ed63e/gemmi-0.4.3-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,405 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b1/91/659f69913777cc1fa590f25f5831d9803c9681923690e426af680d9380cd/gemmi-0.4.3-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,405 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5a/c9/e78fbd8a8d48f13c9da4e6afc4941bbf40142e6423d487335f8fcf46e2db/gemmi-0.4.3-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,406 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9e/6e/0ab2f8a07c42a54d6e6fda65549ff13a081c94601f084f795a380a8f14d2/gemmi-0.4.3-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,406 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/dd/43/aa263331953f26ee8cf573129576a87252c4667686b04280e2e2d46a1ef7/gemmi-0.4.3-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,407 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ad/37/dd827724ae053469469c4dc3f050b5b16093195fa50030a202a593fb380a/gemmi-0.4.3-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,407 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cd/15/4460162edf9aea5c568b6fbdf2b55536800b32e639064db8fb112c779edf/gemmi-0.4.3-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,408 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4d/35/e8b97d567e27090876330931af7a5f097aed5387067718a25a9d4225ff82/gemmi-0.4.3-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,409 Found link https://files.pythonhosted.org/packages/b7/6b/b4c5c2c12da58813f2478fdffac17d86aaf46c570b6f8b42eef9778d8180/gemmi-0.4.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.3 2023-09-15T09:18:52,409 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7a/88/e074befd61f9abbc617edd24283bf642869882c023b2da5cf78bbbe8b967/gemmi-0.4.4-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,410 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/74/f0/47da82d4ba10f1d15a212d74c9d712158b994bde8115f9d6d01f5c4ebe6f/gemmi-0.4.4-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,411 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1f/b6/28f2a87d7e189fe9604897e13fd05a881a7933d7d293fc04efdbc6ad436b/gemmi-0.4.4-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,411 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/89/06/0c6eda981f85fb5f1633d19c8ce0cbd2d8fcf5677b5d563740241737ac90/gemmi-0.4.4-cp27-cp27mu-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,412 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bd/66/c696b84cab12dcc9c41f4d59eb767ed681359a0eafd331d9dfe5bab42b8c/gemmi-0.4.4-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,412 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1b/ed/d6745f20401fa9383ec0f166120c8f1d569795d5dc75601386e9811e587e/gemmi-0.4.4-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,413 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/dc/18/0b5127d8f84979f371d588a323047483a22604eadb457ce9cee709895f29/gemmi-0.4.4-cp36-cp36m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,414 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6b/62/eea9c84d0e37df89b34c03b562522556419c080462c92eede3ccb9697625/gemmi-0.4.4-cp36-cp36m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,414 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4c/62/78cbc5c9e8f68a84547621a5d42ae22560c0215f918a6c8e007835a59e8a/gemmi-0.4.4-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,415 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a8/86/7258f7f4797308e3750c30ec16d9850dac8d0e865fc1d2fcd18e345ff82d/gemmi-0.4.4-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,415 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a9/44/c8cd594bc8075226ec1d38c330eb412650e75d9899db7c160b96b788fe5f/gemmi-0.4.4-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,416 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4c/68/832c4428629c200710b73ab360bbf3cbbe7bdff439618e06c136efb083a4/gemmi-0.4.4-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,416 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c5/02/b1edf3ca6e2bbc04d5bf9223ca53571a6dec25156b708bc4303352f4f8b1/gemmi-0.4.4-cp37-cp37m-manylinux2010_x86_64.whl (from 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https://files.pythonhosted.org/packages/61/12/f0e468abe27ca297d48739409f91ae7c8316179eb46e7d6566ef6f8531f0/gemmi-0.4.4-cp38-cp38-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,419 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e3/25/f86bf28f87680c7acfc0366eaeef544af75c17480777e9572f845b73a9ae/gemmi-0.4.4-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,419 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0f/0b/5ed3cfbd0bc92abf4bed4dd765ed5c3aa639ff2500abe9855c6178f4a8f5/gemmi-0.4.4-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,420 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/84/54/78bf9f5257e928db4a5c3464ac0258b2e7c8ddfb01103dd2278bfc996a1c/gemmi-0.4.4-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,421 Skipping link: No 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2023-09-15T09:18:52,423 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/84/f7/2b4825646ab5c6afaa50858c97267cbc2b234b6e99a43d956924c6518f0e/gemmi-0.4.4-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,423 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b5/34/8bdb8d15ead8117585bec881c80a62983fbd74ebc1b08bf164f15d5f97c7/gemmi-0.4.4-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,424 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ca/14/dd376612fc3899f68d83d60d1988f89402dd0c8f4a7010006b2f567f0d71/gemmi-0.4.4-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,424 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:52,427 Found link https://files.pythonhosted.org/packages/50/93/11e3197ee0d201256c63faca3023f68eb50823f4f0d3dd15c537fce89cc9/gemmi-0.4.4.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.4 2023-09-15T09:18:52,428 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a3/89/62715a67fdbec732441eefb9ab39bd62f7f43334ac4015b791b977be68c5/gemmi-0.4.5-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,428 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b5/39/c38fa021a44e9343cc886722365d453cf364e2a5a67c285bb328b20ff540/gemmi-0.4.5-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,429 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f7/18/b755993b408896b60e4852f9107331006a1b99c83926a948c9b4b27aab32/gemmi-0.4.5-cp27-cp27m-manylinux2010_x86_64.whl (from 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No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c0/72/77ea0f799d73d54999181ddd615206492343ada2617996f7169acab168ec/gemmi-0.4.5-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,434 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c0/0b/52ea2dd8bb3d311e441674a79cee4dd490140865595473cb222096c8cdc4/gemmi-0.4.5-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,434 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/04/0d/a91f70f43b8a0732f82739b3abac31fc6d363c229395308205b87d383045/gemmi-0.4.5-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,435 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/72/1e/57b1c8dd3d6b918198328579e69ce68f7b0df2d7021fe9b7dac55d7e9cb6/gemmi-0.4.5-cp37-cp37m-win32.whl (from 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binaries permitted for gemmi: https://files.pythonhosted.org/packages/af/ce/ab46b8088defeb988d95646598ba860a8a627231198d45ce61a3605ba00b/gemmi-0.4.5-cp39-cp39-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,441 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/43/2c/663a099339e2bc8294891757038496434774ac16c65a2798cc431e206a55/gemmi-0.4.5-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,441 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/78/f1/13a68d2f9a11b3664e0e1de4d79326cd67862bca4f5c49ee4bef2514b9db/gemmi-0.4.5-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,442 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e5/82/f72b3028dd1a01369dab40d8943011dd96bd56d7d019b848b9545345a50b/gemmi-0.4.5-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,442 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ee/6c/c0b2f77136489e9aada94adf29c586fa51e982d63cb162b71f598aa52e4a/gemmi-0.4.5-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,442 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2b/62/0b7d622c7961f0df3818fd1e56d398c7c723ddacb9eaf864d1c729fc8e22/gemmi-0.4.5-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,443 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5c/b1/c48b5b6c866bc104ad5ad0667d4133d9185a982928235270332fb8a21436/gemmi-0.4.5-pp36-pypy36_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,444 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:52,449 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3d/74/b4ea05a4bf76367e0ad27b4c5bc02c2ed31c32bdd2386378d72c90175c59/gemmi-0.4.6-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,450 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ac/10/23fa05a07b6df83608aa59cc238f74e84d8058ad2ae310bdbb47d1c81f85/gemmi-0.4.6-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,450 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9c/55/e8ba86967640ea9c436a8dda39164837d45e7ee5f7fe6688ec9e52ceec81/gemmi-0.4.6-cp36-cp36m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,451 Skipping link: No binaries permitted for gemmi: 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No binaries permitted for gemmi: https://files.pythonhosted.org/packages/51/51/71162451f2e331bd46c154b2673f38823559e90989d5e5c1196f8fd9565b/gemmi-0.4.6-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,453 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4b/29/d5b7a27bad71957f41c644c3c19637f0d9fefabbbc4c501cf6be1eb0537c/gemmi-0.4.6-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,454 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ca/e8/506e69e5caaf93daf0e9429f2379a16ff07d39b76916944f492d7fe369a0/gemmi-0.4.6-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,455 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a9/21/cd910ccb94c96cc6608e109eead1645be18715b4699382aae51604464b71/gemmi-0.4.6-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 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link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7c/0a/d8cb7a05a6e3f199e0363e61e8cfc369820ea6adc84affc94a9363dec59f/gemmi-0.4.6-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,462 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/53/fa/89eabf0dbbaf91fbfc99bffcb3d603474bc6cd1ef9615e3f3213cd0cfe9d/gemmi-0.4.6-pp36-pypy36_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,462 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/85/de/a01cc76fdb904af071b74b404daedeedb9fd215609f18e2104e9ec42cabb/gemmi-0.4.6-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,463 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f3/c0/22d5631bb9cf8af0c9a613987e4adaf670730c2af9878dcd49a8503aece8/gemmi-0.4.6-pp37-pypy37_pp73-manylinux2010_x86_64.whl 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Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c4/b9/f336e9522b8375f5e3ca8f02da39a1b3e5a62aa062ca63136c267a69f2ba/gemmi-0.4.7-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,470 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b3/54/4c0dd5642138b078b208fcd9600fc32e2d412b8945bc5b82fc74cbef20fe/gemmi-0.4.7-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,471 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/25/91/ba6367b2cdd3e7ae0400acecb3a8b9ec714a03850eec8023aa41f6124ff7/gemmi-0.4.7-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,472 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d1/62/5e843d8e0706d9a1afadad6d8154e837f885aeea77ce72b55a7d88fe5cb3/gemmi-0.4.7-cp37-cp37m-manylinux2010_x86_64.whl (from 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2023-09-15T09:18:52,479 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/32/48/f29a0b98b00d7f3a3cf6b7b194f77eab3cbb83a630be8cbc4fdb2d23ff04/gemmi-0.4.7-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,479 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9b/9c/f6426743545f32e53190ca22d524819dff6b24ca98fc5c164da1db23f6db/gemmi-0.4.7-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,480 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ab/07/ea64580e7ed5ce8f2d1db56bf901e9d169d58d4dc52061d5453f6947b8ef/gemmi-0.4.7-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,480 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:52,483 Found link https://files.pythonhosted.org/packages/1a/6a/57ab433972758026e23b70317c45e6dd3d8d5e3b613395222cfc1c66f8e0/gemmi-0.4.7.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.7 2023-09-15T09:18:52,483 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e3/09/d16e2f83de54713c5be0b634de276a7c7f6e2edc4b68acdd8f55973d1fbc/gemmi-0.4.8-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,484 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bc/7b/a0f6d52641d618fca00d462d3ea38164a3d2abe6ced000f01b804975b31d/gemmi-0.4.8-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,484 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/09/bf/081a34019f66d66d4821f790ed3ce0f13f19ab1a1bad9c9867011848465f/gemmi-0.4.8-cp27-cp27m-manylinux2010_x86_64.whl (from 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No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c6/66/c5d99fd508028ac16185206845a30e077d6a50e696d70f4907763bf8604a/gemmi-0.4.8-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,490 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/15/9d/2625a39a3b865592dd6625e6ffb15a8f8db73b4b6e6fb4579a01180ac7a6/gemmi-0.4.8-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,490 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/38/67/04678d6d5c1e221db2d2c454ebd191f1e64426925ac78c74b776923cb17b/gemmi-0.4.8-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,491 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/85/2d/550fc0225d8ee08fd7bdfb0c9afb2d813aed43f7c425bba49f74a91f1432/gemmi-0.4.8-cp37-cp37m-win32.whl (from 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binaries permitted for gemmi: https://files.pythonhosted.org/packages/e1/c5/eccf26a655b44740191e448ab62723e73d9d8101fb7cb61e9ae612f50772/gemmi-0.4.8-cp39-cp39-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,496 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/91/fb/02cddcbd54aaf2bf654984d03228e3ee2fbe3aedd632bc9d8627ef27cbcd/gemmi-0.4.8-cp39-cp39-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,496 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7d/68/d6aea40eabf9be195acb7d626ba502c74ee2dee946630e72239a9cad1a81/gemmi-0.4.8-cp39-cp39-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,497 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ff/15/2b20579d523b79117297458866daa67deed9bb3ad93ef94dce78d57c83ad/gemmi-0.4.8-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,497 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/97/34/5c0e1a3c55b929a6f001cc57407cefa673bda7202b449aab8b0d94de96a8/gemmi-0.4.8-pp36-pypy36_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,498 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d6/34/367588c79586d6d659f1783bb7db682f15bfe2c4dfe14a418a763f972719/gemmi-0.4.8-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,498 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f4/3a/d3278fc9583de3e8cfb6db2692ee91fe9551046274e4c561ae9ee82af8ca/gemmi-0.4.8-pp36-pypy36_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,499 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:52,504 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/91/c1/e3a3dda52195d2256e18deaeba42d1ff8870cc2c856f912e3d92d5286419/gemmi-0.4.9-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,505 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/91/86/7497f5f70a47af921e946978c282d41f6d6e48aa7cba7d9e48a91665674f/gemmi-0.4.9-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,505 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d8/4b/12cda0c8a94cf6f5424ecb640e97e53bf3c9ed9bc714ecf6f5da73acf356/gemmi-0.4.9-cp36-cp36m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,506 Skipping link: No binaries permitted for gemmi: 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No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f4/70/52c43c2a25e9394b8e21681b1914e2d31c2f5cb5b8c072dff1aaa9448b28/gemmi-0.4.9-cp37-cp37m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,508 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a9/dc/59a7a0c5c4f854f6e1adfce5699f1ebcfe6393632c218238a5a31fa0599f/gemmi-0.4.9-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,509 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a2/cf/b3ac2fe6712a13eb3faa131256a79ac2d58a46add4912f09a029102fda67/gemmi-0.4.9-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,510 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0b/79/a9f847512b292ba6a2718a87ac54090d9af14b7bf54ac874ff100122dd8f/gemmi-0.4.9-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,510 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3a/23/46a9343185dd2760a81553627971daea3d2af7e5762585b2234f111cefd6/gemmi-0.4.9-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,511 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e1/e1/d92de9990dd38683f20dba5974b7abff16748fe7dafe93693c9579ab64a3/gemmi-0.4.9-cp38-cp38-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,511 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4b/e7/f29a3313d0f0ebb7cb7f30157f5e72360811dfe3967e54d908156155086a/gemmi-0.4.9-cp38-cp38-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,512 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/50/c8/52ad765f76e715a19ecd1b05d6b2f61e3022037343fdd21ac596f8b61ef0/gemmi-0.4.9-cp38-cp38-win32.whl 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link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/72/78/3d88e30416ea7e5281a388c548786e42cc34d0a3dbc5b6c3ae99c4e9584c/gemmi-0.4.9-pp36-pypy36_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,517 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/54/70/24d2179a9a315ee7697b89434fe4704fa976bc5f8f35bd36ada7d3146554/gemmi-0.4.9-pp36-pypy36_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,518 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6c/57/ae1e113330952b2dd3e16054607347065c39635d5b0eef42f82706c4573e/gemmi-0.4.9-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,518 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c5/e8/5f9736f5c9eb35d4e7e46863ae1178edc03ff57969c4ec2b410442bf588d/gemmi-0.4.9-pp37-pypy37_pp73-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,519 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2d/a2/8fa1006b4b71ffb6127c284aa6a3ab434aeee124724333f338d6b8b63019/gemmi-0.4.9-pp37-pypy37_pp73-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,519 Found link https://files.pythonhosted.org/packages/a3/07/40e5d0b8eeed379c2f0494b24d5777df3ad1df473e49f694688fe55d606c/gemmi-0.4.9.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.4.9 2023-09-15T09:18:52,520 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5d/7e/b1b2e2352137c9efb05b74829494b236cba98819d7b1eebecea2712cfa0b/gemmi-0.5.0-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,521 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d7/e9/ec01690a20730dcd1a058fcceede913ceaa418cf54ab33ac6ae581afccb0/gemmi-0.5.0-cp27-cp27m-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,521 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/96/4b/e158002bc02949b84a5db4d34ee590e483ecbdf0933c91d44623fdf2d0bc/gemmi-0.5.0-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,522 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ba/2e/35ee66fe2b29f24d4ade466c65bcc05a329831cf2b2b0835c8e5f605c288/gemmi-0.5.0-cp27-cp27mu-manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,523 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b5/b7/df0e4c0f360194eecc6497ccc9efbb77e16e86e30a80f05fb8c826961084/gemmi-0.5.0-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,523 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d3/5f/2a90f7feffa450e0c01107b789df325ad04d6d03e38c0170e4947247eac8/gemmi-0.5.0-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,523 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4b/cb/3095d21f6581cce5238ef7d22a952dd686b5cde4e5f0353b42f7d5722d6b/gemmi-0.5.0-cp310-cp310-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,524 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/62/9a/df01727dabeeec4325edd3c6e300394c351ef632dd924a1e57b95397ac5a/gemmi-0.5.0-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,524 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/17/ad/7711a08353106486f32bae4f04cdd61e9d074cd6f4041529d32ca8733947/gemmi-0.5.0-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,525 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7b/90/839af23d8b9ad3fc3c8082013d31940de27508350b274e405a716cbd6c36/gemmi-0.5.0-cp310-cp310-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,526 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/80/0f/6f8136965ed4b67f0b63ae86263f5012e4e5fb98c9d45ae6664c38e5934f/gemmi-0.5.0-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,526 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/89/3c/ff58df8fff8168a9a06e5f6ecd3f85e4047b8b4b1d53ae7f9b1f71d35b85/gemmi-0.5.0-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,527 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b6/1e/f77d398d0badef12f6717696b4781114fc8840413d03f5cd9ee6f867e212/gemmi-0.5.0-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,528 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2a/1e/5519dac06aa9d7c30e6402b54a11621abe66b796f2050c5f26be003cf3a2/gemmi-0.5.0-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,528 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4e/08/902a8302cd99b58450b9e7ab3f72c0f579bb6f142a491d2bb36792868e51/gemmi-0.5.0-cp36-cp36m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,529 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b8/2d/f75ed6b935336247702844ce20b8c542d5d1f11938f04675c822d536ca54/gemmi-0.5.0-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,529 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/17/a7/92cc0e9a3c0ca7cb74cf4a9842a6ee8e73f889474f759316d15468ad756b/gemmi-0.5.0-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,530 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/be/77/d6b339d7fb4d03b99cb7348548308df8aa2083c036892cf1cd0348adc008/gemmi-0.5.0-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,531 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8e/de/de64b9614bc093414e201e41af48e62491033d02d54ca10518789f01bad9/gemmi-0.5.0-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,531 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a9/ef/a8a518a29b43c417dfe8599b97ff8810a10f2ebb932cbc599d221ea05f34/gemmi-0.5.0-cp37-cp37m-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,531 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/77/47/2c77c4f20424b8033cb19f9149b10f37248f6362bf6b8645470cd912ff9a/gemmi-0.5.0-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,532 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2b/6c/92cdf7e4a6e25d3e38fd9240de050dd0cd824732ae7b110286881767c7a2/gemmi-0.5.0-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,532 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ea/0d/d2fdbd7c6b9b84769358c7e88fe97f3cbde12b3b6f5c177fd36a5cefcea4/gemmi-0.5.0-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,533 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2b/40/ba626feff2b321db0b80b31312142f8dc0da8706ea65eba09eb92c69fb52/gemmi-0.5.0-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,533 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8e/58/2e3530707625e09caf89244deb9759afc44a775a2fff6ba3a7bef82ea476/gemmi-0.5.0-cp38-cp38-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,534 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8f/3d/2245c341a333ef8fa247e44237665150e6167f8ac2c63dd01f789bd72959/gemmi-0.5.0-cp38-cp38-win32.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,534 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3a/89/33e00d7d352fad174b8767c4b9e8538fb6f33021689a36ee3928ee9924bd/gemmi-0.5.0-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,535 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/87/d7/7dc338573b4b8181c10df98be95cdbeb0b4e6a93079096623222dd6aa3a8/gemmi-0.5.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,536 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b9/1c/37636503b6acc4df72f7f2b8bb15941a44f129b0190a1f0abcdb561dda1a/gemmi-0.5.0-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,536 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d5/95/61916884f56af3cc500a8029a478e45eb05a716574c71656304bfd3455ee/gemmi-0.5.0-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,537 Skipping link: No binaries permitted for gemmi: 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link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c5/a4/44932652e4acd0c04debcdd7115d1c5a087fc8e7477cdbbbf4f1ee771e74/gemmi-0.5.0-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,540 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c0/50/d2bd30b284932128864c0ba34e3a8cf0dc6d1c9b6dd44e081807a30927f3/gemmi-0.5.0-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,540 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a5/be/8da12fbe007e468ef7125affeb15375ea602ab22eed9d5197278356ae884/gemmi-0.5.0-pp37-pypy37_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,541 Found link https://files.pythonhosted.org/packages/76/6f/0f81a068de2ac6f7153b9590888c29247a3ca23d1b3e5f54e9aab3f90eda/gemmi-0.5.0.tar.gz (from 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https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,546 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/c9/6f2873961d70968de2c7454667356545b49729458986e2445babca52b666/gemmi-0.5.1-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,546 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/2b/8a/5bee8dd8d5fa98a08788e90bc85f178697095ee874fd519f851371638ee3/gemmi-0.5.1-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,547 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fa/70/de03b41043537110b431c090827318d40e987d2d76d45cc2b26568069a17/gemmi-0.5.1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,548 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:52,550 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3f/2a/49fcab403e40d161ef7d5e6b74e1c16d1377e93ff9f05a481ac2d93d5b9b/gemmi-0.5.1-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,550 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/37/6d/3abe1d11e3d5412b83bbe1e6227ed14a4e609a199b14d84c877154004130/gemmi-0.5.1-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,551 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/42/a4/e50ec4ffbbb1e2fd754f9e580b75572a452b6f2ef6b3b6a517c479c43739/gemmi-0.5.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,551 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4c/dc/ba2300387d633bffacac2f6c9c0a68669602a15efe30b6e35dc9599685ea/gemmi-0.5.1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,552 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8b/78/dcabd5c547aa07eb130931089d810c21577ac7627a9b8f9a6cfc0a9db0f1/gemmi-0.5.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,552 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/04/da/6b9be38d955006a6dc09955cea0e6c3561b0dd3cab2d7102d25fb012d62a/gemmi-0.5.1-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,553 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0b/b0/2b9efe6a849f9fe8ee450ba0f85b6298a68696c813dc33fe3a2cdf033aea/gemmi-0.5.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,554 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b4/5a/881dd10dda412b9f8c7610a2f588fb16c9f1ec22d88811f0bfd1a2bab0d5/gemmi-0.5.1-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,554 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/27/be/57ed099c9778f29bdfcb8496cb125d802cd8e1967fcbba3b2e029e06a900/gemmi-0.5.1-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,555 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e4/1a/68c0cf47ccb39d4215b2756a4c547b99bc009233e9def8b911dad19f7523/gemmi-0.5.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,555 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f3/8c/06f5b496a81040137b98886745477b7eee4edf4bd896d4123bb121fc1671/gemmi-0.5.1-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,556 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/50/cb/f2b6eed33269e437d6c1a6bb1398e1738f41b3e0ee4ff403e45d5e9f119a/gemmi-0.5.1-pp38-pypy38_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,557 Found link https://files.pythonhosted.org/packages/57/65/5d3e560231481bf7c79a05d88230177e435eb4d1acdf59ccf42a716a0b02/gemmi-0.5.1.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.1 2023-09-15T09:18:52,558 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fd/a9/5f858b6487c4e5ab0622e6fdcdf0538c72bd50f825617150471754585acb/gemmi-0.5.2-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,558 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4b/40/d5af9e230a7ccea751437fc4b85317844e86113514e83b3f7e0393f03b40/gemmi-0.5.2-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,558 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0e/59/c560957e0664136774ffe09cca069b2b0040bd8fa24b9452d9ae1bb98102/gemmi-0.5.2-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,559 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/81/a7/be0bab8a6ffc965c5ffe54fa58185e1292549592cfe2d3b591a96b7259cc/gemmi-0.5.2-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,559 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b3/9d/bc42166366a086933cf70c4225c71ba8c138798a865c95a0ccecbc8c933f/gemmi-0.5.2-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,560 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5b/67/2344228e9a6de7cf2de55f186f97940411c21e5db626d4b0836511c986d1/gemmi-0.5.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,561 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/34/3b/979104e1d6612313a87d36ae1471d9283322c34b187360cf6ac323341c09/gemmi-0.5.2-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,561 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ea/26/fb7bb9d8046137561d4ee1e78f69efa922459fd0dbf4065547a2dace3675/gemmi-0.5.2-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,562 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d9/47/646295105e51c0022c0dc5adf2b3a6497f73e802bf741cc45b1ca5b45e65/gemmi-0.5.2-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,563 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b0/34/aa506ceccf8aad40def7f7de57e4a17384aff3ae311dca7e89a10ea9a8d1/gemmi-0.5.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,563 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3c/7a/6832c9ec110fa92d49c83b29a20a7c639bd20748a711b6743fa5cfd125dd/gemmi-0.5.2-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,564 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/be/15/dd9a5b7a3e7e98254ce1c991d759777c7e4e2b8b7d277e7ddbb280ed5745/gemmi-0.5.2-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,564 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/12/aa/527a757195dc72187c0ff83bf131dcf0038bf0c2e3a603a38d7fa4215527/gemmi-0.5.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,565 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/00/fa/9f13049567db238c9d54878057964a2bbbe6487eaa44e0dfe43f91499001/gemmi-0.5.2-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,566 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a5/5d/3b545003aa183963308071286e02eabc505dc916d6fd5345a9da1016cb1c/gemmi-0.5.2-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,566 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:52,568 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c3/c2/26696dd217cde1c53004d6b43a94c2704c363ae16e390ea6c69bdd2239c0/gemmi-0.5.2-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,569 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fc/c5/6595cd65360e50de9ee0fe440fab1f2d0d00ded089a6fbe651fe6ae86344/gemmi-0.5.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,569 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/44/ee/a6d5ba33d69cc6fdb73effea27ff3e2ea9fd3bbe00e535902c24c098e349/gemmi-0.5.2-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,570 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/77/3e/1bb0e7f54832a84d703740394e4e88ee8a63807930bfe36dcd2e61e18b70/gemmi-0.5.2-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,570 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c5/bf/05d6199ebd6b4a78d89f7ab4679ac525ff245db1310b35fdceeed72268c5/gemmi-0.5.2-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,571 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/96/e3/46432303490b40a1db81cecac60777c45469bddf13af36e0364a8b73e98b/gemmi-0.5.2-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,572 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e2/e4/d8552659c51352812ed8eaea7c7036cd1d6816c4129521bba271342dad71/gemmi-0.5.2-pp38-pypy38_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,572 Found link https://files.pythonhosted.org/packages/05/d2/7cbd2c8ed64f30098ca929426c4581947d3a307657ad383897c6d426c352/gemmi-0.5.2.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.2 2023-09-15T09:18:52,573 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/55/e4/aaf93cf945278e8eafe401c439a3fa0f9872fe1403adb3615cfd98b2eeff/gemmi-0.5.3-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,573 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ac/0b/8e99c7eb4b831b9fa748d4a1c51691017c4c74960c992f45a04093df0314/gemmi-0.5.3-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,574 Skipping link: No binaries permitted for gemmi: 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https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,576 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d5/ec/bb184260b935967bb7e05f02a369ce12bb1c5ceac1376da6b567f17e0d9f/gemmi-0.5.3-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,577 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b3/b3/5c8739dc4b97a085259caa681178227ba459f239653afb39a40b18e3f78d/gemmi-0.5.3-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,577 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b9/6a/15269ce5647809592e78d29ebe0e8cc35e637b57cdd51afd508642292ee1/gemmi-0.5.3-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,578 Skipping link: No binaries permitted for gemmi: 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https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,580 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ef/1d/07b0ff9f29974b8862afda122a573c9cde0d7a076179c8b6eb8e9fbc11fe/gemmi-0.5.3-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,581 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/27/7e/c78766eca9aa7ff1e0cfc5513b60c22d34d7791c215cc6c4cbea70c7a571/gemmi-0.5.3-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,582 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5d/d7/41e2e4f53d2391fd50fe5da1b0bf61cc2411dda9ad0113137753cd5498ee/gemmi-0.5.3-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,582 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d2/01/d09bdd5e6d0b40c3193eb628c048119a0778053a68836679d7f24000e7f1/gemmi-0.5.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,583 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5f/f1/01ea751ada8a3665c06c19f7a2c0b3902735ad44c329c1dd0bc2d54181ad/gemmi-0.5.3-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,584 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/62/0b/e7bdec1e4649cf3063c561781ce0c6952c3f088bdb903c6d6b2d4d114736/gemmi-0.5.3-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,584 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/86/3c/16781083dc69d625181527455f69d8e3fd953cff5ddbb12fca049cf284ba/gemmi-0.5.3-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,585 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/20/c8/cc9d7cb994b98cd594952fdd297897ded30d9626b7200322cd8bff2f72cd/gemmi-0.5.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,585 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/60/64/9581c9bdf168eb3e20271277d4f03c0f41ad32f9e4a660f5bb3052cb65e7/gemmi-0.5.3-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,586 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/18/e0/752a99fc9677f351e1d491d8e91f5e20ddb4a3a16c584132d14051529149/gemmi-0.5.3-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,586 Skipping link: No binaries permitted for gemmi: 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link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ea/16/9cdb5f325927d94675187cce48d3f9d70a69801a0f0c0b9b9a5812335932/gemmi-0.5.4-cp27-cp27m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,589 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/34/22/280fbec5a23dbcc5657925137f5dd0568b9d1f13b55c82db21c0689cc528/gemmi-0.5.4-cp27-cp27m-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,590 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d8/d3/65f7ca88c42515502eca86a82322123f83b65fb925b7adcbc8ad4d00acd8/gemmi-0.5.4-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,590 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fc/b6/7f62137922cacb64cb7c3c65a6813183c9dbf18c56743ff04496856c9e59/gemmi-0.5.4-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,591 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d7/fc/630f4ddb5f5e9a68f8cca1457675d79eb6951dd8dcc1813ab788dc649654/gemmi-0.5.4-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,592 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7e/2c/edc7d68067cc769844907e2da36785a5e6ccdf642a4958001d0644b51cd3/gemmi-0.5.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,592 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/bd/55/a4c35b0b4af64f09dbf804c829df1c823ca7ec88ca1749af6180ad99637c/gemmi-0.5.4-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,593 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:52,595 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/6e/40/9b2f5eb45200eed97427e0a3355f81e01cdcd020017fef5962e10b37a822/gemmi-0.5.4-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,595 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ba/63/be97c983f4d05eb9834c63bc2af12ff079c91ca9e5704deadf6185470ab4/gemmi-0.5.4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,596 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/dd/a5/9b9833335b38730e20103557d943896c983406df688e48b3b1d5756af918/gemmi-0.5.4-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,596 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:52,599 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/17/19/9135d06fdc0b4794326c0f020a658b053c9ceec94ecf272233e3de503129/gemmi-0.5.4-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,599 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d1/ff/8b5914f6ab4d7b3545a1099e5fc5f3f793cef92685e759efa487b6c4d068/gemmi-0.5.4-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,600 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/92/a5/88577ee7c9715f2f2f1e3fc81e892bffbb840598699063960957057a7995/gemmi-0.5.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,600 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/75/82/dcef0f4314e04d5f79575def71f8311811f6699e3c36fd79153892515fd8/gemmi-0.5.4-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,601 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f4/ef/9dbe8ef4d72224b1f768f15597bc7d63a92e45bf167e13c8ebf5c759c6e2/gemmi-0.5.4-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,601 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/18/d0/1a6f551b957e99b87b2a69c04142cc12484158ad9e97782f8c7f3cfe6347/gemmi-0.5.4-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,602 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/42/4f/c0814113c10a1bef981ccc9d58e68c21994cc05f9cc524b51c38066fd914/gemmi-0.5.4-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from 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(from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,604 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/77/d2/1531afc7535decb6b7bebbb74524ca3d4c716bb7f3a7570f0acc1a91cc34/gemmi-0.5.5-cp27-cp27mu-manylinux2010_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,605 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b8/3a/a6ecf3270090f874239f38287a3eda4e7fdb071bb7e24774a23207b76c73/gemmi-0.5.5-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,606 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f8/cf/83ca23cd819854187169b6a474a5c4df6e9334762c9021ec0303f7d51765/gemmi-0.5.5-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,606 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:52,609 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5c/39/e809c957ba1fe10ff61af42f87b84c00f8cbaaa894db076763c9a1838fcf/gemmi-0.5.5-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,610 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/da/50/24ab02b6a771c88127e7c414e516aa71f76db1f04abd7c9491769c61e0ae/gemmi-0.5.5-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,610 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/48/9e/383f0ff461bfc73d4a00604d2a64c69443ce5e108f54eead7502d5935709/gemmi-0.5.5-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,611 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:52,613 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f1/64/715370a8abc99de51024107b1ea899d7cd15e0721331e61b61d950771767/gemmi-0.5.5-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,614 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/70/7e/000c77c1494a3b7b2b301b9234da30fec8ea78b5392617804cf3c4c1138b/gemmi-0.5.5-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,614 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/8e/64/5955e1602cc634e8e125f41a726a029bb75a7f4164783c79a4f174e52064/gemmi-0.5.5-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,615 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:52,618 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/7b/64/5e4a17a96753ac6b446b2d845b5347402d3752a4a2c6a6911d48f2ee7341/gemmi-0.5.5-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,618 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d5/07/b239263539dc2aa2f7dd30755bf4cad735861a81d31fc62a08bf8b4405c7/gemmi-0.5.5-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,619 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/48/90/3c7646c751dc39b2a0d44a4800fd61cbdae17d0207b5edbbf2c91778f5e5/gemmi-0.5.5-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,620 Found link https://files.pythonhosted.org/packages/61/fd/6d97b18fb1875f92195eb0177d824a5778310a137fd39fa9c943ed8e5edf/gemmi-0.5.5.tar.gz (from 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2023-09-15T09:18:52,624 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/19/a0/4cd0c72f67d1a44b5b6466a8abdcf2ee84d75d81a9e4b8c240c7c24b15e5/gemmi-0.5.6-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,624 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d2/63/ca5211bfb39c1934ed40b723be97dd7efed2e50a3f56b667720e306625f2/gemmi-0.5.6-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,625 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a3/99/c454fb9a6657d21f4de67c15bb48a5158bb28b707c1bd0c402fc25695718/gemmi-0.5.6-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,626 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:52,628 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/4e/ef/f64bc4e49cb6ee6937aa3b0227465519eda3c256fa0534f427793fdfaddc/gemmi-0.5.6-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,628 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e8/6e/8c79ba89f1f40510864f001434183bbe249842254a774c2f44a4d39f624e/gemmi-0.5.6-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,629 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0b/27/7dc4a6f04a5c9ec681c000f2c5b21b63721585902e8bbacb4c1466d8e669/gemmi-0.5.6-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,629 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:52,632 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a0/74/ab723bc4e967a1bc60bf3a246ce1069c6215e5e6f20c45ea111bc2ea11e2/gemmi-0.5.6-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,632 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/18/e2/037d85e2bc942e71df33b36e5551271853fdc5fe727fcc70e02405470b22/gemmi-0.5.6-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,633 Found link https://files.pythonhosted.org/packages/d8/b9/f34297a0a44be48553a7fee2c2cb3cdae9ba629b91755becd130fcd1a4d7/gemmi-0.5.6.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.6 2023-09-15T09:18:52,633 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/07/4d/15b3312e17b104ef2de349d509543a43a4f02f9f9fa24764651f3e715083/gemmi-0.5.7-cp310-cp310-macosx_10_9_x86_64.whl (from 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2023-09-15T09:18:52,638 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e7/f7/699371413dde01c3775ddb9a9606c64d22e202f707a158b8b7999a5c36e9/gemmi-0.5.7-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,639 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a4/6b/b6aa72bd150c22cd5ed36c952f589bd6e135addc1a53908976fb2e27e961/gemmi-0.5.7-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,639 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c7/3e/6b22d8ba1ab0c423d5086dce986c31e54894890148bafac9cd6502928871/gemmi-0.5.7-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,640 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:52,642 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0e/4b/ec697a9dc25567987c188f007403de25cbcd7bebdf01d5d76f889101168d/gemmi-0.5.7-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,642 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d2/3e/d4a38d1df34cd653ebc3f969a87e83096c1cadee26b67aebb62efb197fa2/gemmi-0.5.7-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,643 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1b/fd/7a55214ae1697d99e1477d5ca3cf1193ee12ce43474dbf92314d5a0fe8ec/gemmi-0.5.7-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,643 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:52,663 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/1f/85/b213cacd5e71ab28ae1229899773786f9e062fe2c0f563a794b3e69b28b0/gemmi-0.5.8-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,664 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/06/64/52befb7f6fdb71090c1e892bf779c6e082f8780bb4fef1b80da6a428b1c8/gemmi-0.5.8-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,664 Found link https://files.pythonhosted.org/packages/31/c8/f3eaa51dffd731487601d5c23dc4673efe1be59e5dbe3addb2044d1838ea/gemmi-0.5.8.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.5.8 2023-09-15T09:18:52,665 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fb/9f/a9240e99a072f57a9d8acb47e1fc4470ea21837e16005d464ea2acba464c/gemmi-0.6.0-cp310-cp310-macosx_10_9_x86_64.whl (from 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2023-09-15T09:18:52,669 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a4/f5/6a1336ab3ba569643cd1a539e1fde833309c733e3d187fbba3fa4a513083/gemmi-0.6.0-cp311-cp311-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,670 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b7/43/982038c5665d615ee5d7b626c6e74b014852b51e9a79e210e06f85f03d4b/gemmi-0.6.0-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,670 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/36/e6/dd2e056f2cc07d68472ac9a167a2e492961da1daae6c9db8d3e3755b4b6f/gemmi-0.6.0-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,671 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:52,677 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/df/6d/ed3bce7eeb73d9076ff4fb3795936dc8710e27abc4965e2709c1cdac3a48/gemmi-0.6.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,678 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/3c/a9/afeccb27445f1b37dacacd43cdce2b4c41faed56d233c823d1278add7968/gemmi-0.6.0-cp39-cp39-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,679 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/82/60/2101d761c3a95e1addaebbc09fbd2051c190c70b9a1ce8550ee855719826/gemmi-0.6.0-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,679 Skipping link: No binaries permitted for gemmi: 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Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cd/f5/ae84e87683311fa9b2cb3ccb196588defc9bbe08c57d7fd9e0c1b97875f0/gemmi-0.6.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,687 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/02/f8/658246af5745117893f852df44aae07c7caf61502c7fc5a6711e1eb60618/gemmi-0.6.1-cp311-cp311-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,688 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/22/2a/a788ecd66793bfb22731a2e668cb05158cd96ecd8001c5036c14834c3f9e/gemmi-0.6.1-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,688 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:52,691 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/da/c8/722a5e08eee5b316a582fc251eb08f4fc99b1d634f2332e68eae26ba8d7f/gemmi-0.6.1-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,691 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5c/7d/756544719175bf44a52bd632c2c76746ed017c4c9f18cc552da4655c6c11/gemmi-0.6.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,692 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a0/bf/267a4613fe7e80e11ec31a74eff645ff486198fe52c7050dc82f22cbe0ca/gemmi-0.6.1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,692 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/70/82/c64da046f04966f1df9e20b3174f88b53b5dc33cd4a75c2d7ea703719e78/gemmi-0.6.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,693 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/14/20/7260a535a21cd073f8237fcff65026ee800368b05f0db9f21b028d95b21a/gemmi-0.6.1-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,693 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/13/b2/fecb0748b5fb04ab9c9313db0908f460da21112eea85526a78413aad7ff0/gemmi-0.6.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,694 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/92/10/4b29adb9d05e2caca176238d598ba624cf36ea06f130a6e78cfbed012a5a/gemmi-0.6.1-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,694 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c9/8a/1a374d9147c4f065d1d86541871a1ddc1e19b82c0d29559c4bc12ca7e7f6/gemmi-0.6.1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,695 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b6/8f/4b0b65112ac367bc97fdfaecaf66ee317f38b5a49a70ab504e290f4c5035/gemmi-0.6.1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,695 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/43/d6/45cf93e379bd915e52ea55888cbe6c8707d86e5329369830d3c061850a91/gemmi-0.6.1-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,696 Found link https://files.pythonhosted.org/packages/42/0f/9aa86fa4b44d9cceb6e0e3240c8869d3fca1d36a35ed9ed6672d02e10780/gemmi-0.6.1.tar.gz (from 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2023-09-15T09:18:52,705 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/39/63/c9b43ec4e6e1534b8201613eac97441d834774c6fc75b54ea48b2fc3672c/gemmi-0.6.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,705 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f0/e0/a31f0c4ee2b0c66a1620ec593416e9c5360568958805604fa09b0bb5c808/gemmi-0.6.2-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,706 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0e/f9/194a7531f16bf41cc697134a3805d7fefa0a5dfd65d6f9057cafd9f24da3/gemmi-0.6.2-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,707 Skipping link: No binaries permitted for gemmi: 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link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/1d/80e2b1486f0ca62fa0a941ab1bc519b65b9a2d67e9aeacca938abedd1ae2/gemmi-0.6.3-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,713 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5d/f7/450ec32fd7bb8567db2a67bcfac3fb1513b7f8c1083da00a163be71ad2fb/gemmi-0.6.3-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,714 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b6/50/42ce57c58aa0e9679690f044dbaec35160d42c5581588eab6601189e4513/gemmi-0.6.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,715 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/d2/20/b7e980dd668de2fffbb16fbeb1553b4f410f02507ec1a334976854cb7181/gemmi-0.6.3-cp310-cp310-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,716 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/63/86/eef29582562dcb5939471bcf5bff800f8b1f074fe9f50a332ba7bc4759e5/gemmi-0.6.3-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,716 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/e3/07/2859d0b61e6a8c6da0284bd21e3dc25b0a3f57a715931f663e90dc6f700c/gemmi-0.6.3-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,717 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/27/50/7b8db040b17e71dc3dab6eb5f9f06d9906c5176182fae8cf17cbf7e914f7/gemmi-0.6.3-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,717 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/f1/cc/699e051a8a6210709ce253b077ceb260241f5dddcc1e98be0d99a0c1a97c/gemmi-0.6.3-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,718 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/93/f7/ce33f64f767e618b8194a4ad7c6799bb0de5bd303e28ae975484ba2371cd/gemmi-0.6.3-cp311-cp311-musllinux_1_1_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,719 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/49/d3/98b5a45f6ec9e7a310fca04b2d146b6bb08405707e5580bb4981d7f3ef93/gemmi-0.6.3-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,720 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/cb/41/7d3b982b3fc9895b8b53b772ef169feaa2eac45d4feacbb99a46533c3a96/gemmi-0.6.3-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,720 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/0f/54/782c77c72f169030c51dc09d71f5caa5ad458d75d313565f0b74732c3750/gemmi-0.6.3-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,721 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/5e/40/dd225bac00e702847dc90d6f6ac29af65e9964c6607d63b5d83f8fecbefc/gemmi-0.6.3-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,721 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/c3/61/32901b67f656efb85f036d75c247499258df0bb913708a45d165d307f9a5/gemmi-0.6.3-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,721 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fb/f3/958eea26aac8e0d75fe53f2bda99e845af102704a67d842b57a99552cbc0/gemmi-0.6.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,722 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/84/5c/8921c5f4ac754742d68ddbde778141925bd5a4f2477ced4920518b2facbc/gemmi-0.6.3-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,723 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/18/69/19929a2fc1c0ef11721efc7fa9fd80c47556ed80e28ff4147135ddf02056/gemmi-0.6.3-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,723 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/08/ea/f7b0594184ab627e5b7bc8dd89a7c22e337965b474013724772bae475924/gemmi-0.6.3-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,724 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b4/c1/92853463305098ebad409266e674086760ab1cb2c76d993a3fe93ed8051b/gemmi-0.6.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,725 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/a3/54/cbb0cfb03a52649e47c4a184f81c60a003e1d79ec84a65f47f0634d51dfa/gemmi-0.6.3-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,726 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/9c/ca/3eba7e46d7bea0261a2f518396321a5873271193085613e1c024edfec3ad/gemmi-0.6.3-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,726 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/b2/34/111177b73dcc8adc05c3447711c127beacb9811c922883afd82eb3fcb5d0/gemmi-0.6.3-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,727 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/17/98/a7de036d0ce4096d60d826999e40268f3237d5c1949bac8a424b448d51fb/gemmi-0.6.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,728 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/26/f2/fde6630eff028a5e859d607e9c484525b967dba792a64fec2d37d2075e9c/gemmi-0.6.3-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,728 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/fb/0c/497caef7e24bdababacd7e0eb81678b215dba7b263f31b6003e54db8c53c/gemmi-0.6.3-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,729 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/ce/c3/181c59a7a81bd5cc4362f923c1ba42424b0bff24ee8f4fa46da1db5778bb/gemmi-0.6.3-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,730 Skipping link: No binaries permitted for gemmi: https://files.pythonhosted.org/packages/20/ed/30eedc8aa3f2c858d357c9b8dbc234560f20aac2f4b849aee3105d94377b/gemmi-0.6.3-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/gemmi/) 2023-09-15T09:18:52,730 Found link https://files.pythonhosted.org/packages/e9/f3/8b3a4c1adf145507ed19cf58788f9a0535b78c2bee58eadae26ebf4b7e18/gemmi-0.6.3.tar.gz (from https://pypi.org/simple/gemmi/), version: 0.6.3 2023-09-15T09:18:52,731 Fetching project page and analyzing links: https://www.piwheels.org/simple/gemmi/ 2023-09-15T09:18:52,732 Getting page https://www.piwheels.org/simple/gemmi/ 2023-09-15T09:18:52,733 Found index url https://www.piwheels.org/simple/ 2023-09-15T09:18:52,992 Fetched page https://www.piwheels.org/simple/gemmi/ as text/html 2023-09-15T09:18:53,025 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.6.3-cp39-cp39-linux_armv7l.whl#sha256=c7377c9e47775fb567659878aa2eb4c68b16c36a8fac32cccd8ebc69e183ae11 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,026 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.6.3-cp39-cp39-linux_armv6l.whl#sha256=c7377c9e47775fb567659878aa2eb4c68b16c36a8fac32cccd8ebc69e183ae11 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,026 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:53,029 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.6.2-cp37-cp37m-linux_armv7l.whl#sha256=5faf4e74a61e45bc998b0cacb48d89d5f2e3170a70327be22b562097086b5fe4 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,029 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.6.2-cp37-cp37m-linux_armv6l.whl#sha256=5faf4e74a61e45bc998b0cacb48d89d5f2e3170a70327be22b562097086b5fe4 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,030 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.6.1-cp39-cp39-linux_armv7l.whl#sha256=9cdf2df4d98fc1b1871947004c4a11cdbeea0f8e91792b34a470d3070df61251 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,031 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:53,033 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.8-cp37-cp37m-linux_armv6l.whl#sha256=cb1712edce1e77e72d89f944731f8921a14bcacd4beca9ea2cad730f395b64ed (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,034 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.7-cp39-cp39-linux_armv7l.whl#sha256=217829361aa2e8d0bbf811ca3783233775b4d906e85ef7d483a15fabc73919ee (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,034 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.7-cp39-cp39-linux_armv6l.whl#sha256=217829361aa2e8d0bbf811ca3783233775b4d906e85ef7d483a15fabc73919ee (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,035 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:53,037 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.6-cp37-cp37m-linux_armv7l.whl#sha256=ebf3d9e652706444fc456143c2ad74f470a8ac3d1548b471f071a83e8d14813c (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,038 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.6-cp37-cp37m-linux_armv6l.whl#sha256=ebf3d9e652706444fc456143c2ad74f470a8ac3d1548b471f071a83e8d14813c (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,038 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.5-cp39-cp39-linux_armv7l.whl#sha256=8009bd6c9ff05ba855d46259b0947b0f0b036af556d8f91f974c1a5a3c511f27 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,039 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:53,041 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.5-cp35-cp35m-linux_armv6l.whl#sha256=9467b11948268fd9f578d982bba4cfa8cd2ba910997da7191fa7babbfe48775f (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,042 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.4-cp39-cp39-linux_armv7l.whl#sha256=8ab06aa6ca1fb18e3b1725004277581551891aa0ceb007c9242dbdc61e331efc (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,042 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.4-cp39-cp39-linux_armv6l.whl#sha256=8ab06aa6ca1fb18e3b1725004277581551891aa0ceb007c9242dbdc61e331efc (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,043 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:53,045 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.3-cp39-cp39-linux_armv7l.whl#sha256=4d79c93b856f3b4200b588538f01b84178ece304019da3b03e6de8287b6d311a (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,046 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.3-cp39-cp39-linux_armv6l.whl#sha256=4d79c93b856f3b4200b588538f01b84178ece304019da3b03e6de8287b6d311a (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,046 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.3-cp37-cp37m-linux_armv7l.whl#sha256=3d8916944c98ec93f9bd59c9a383b4a1791583710d7476df8199f3ea86bbadb9 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,047 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:53,049 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.2-cp39-cp39-linux_armv6l.whl#sha256=a916f9b8f3aa33b7aaf544ac67c897653368dc30ecc72943055e5fcadbdd8bac (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,050 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.2-cp37-cp37m-linux_armv7l.whl#sha256=052489f96e150b422dcff47059295f7a84a7fcfd4b952e18ad3b5f6e898a2e12 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,051 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.2-cp37-cp37m-linux_armv6l.whl#sha256=052489f96e150b422dcff47059295f7a84a7fcfd4b952e18ad3b5f6e898a2e12 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,051 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:53,053 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.1-cp37-cp37m-linux_armv7l.whl#sha256=b1ca40b2288b65a09170f6292ab50465a750d540905601aede8ebe627161b37d (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,053 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.1-cp37-cp37m-linux_armv6l.whl#sha256=b1ca40b2288b65a09170f6292ab50465a750d540905601aede8ebe627161b37d (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,054 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.1-cp35-cp35m-linux_armv7l.whl#sha256=b3c34bc9a9dd3f01dadf85b11a711c6f605d3cc9dbe55f93d07513a9a4200cb3 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,055 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:53,057 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.0-cp37-cp37m-linux_armv6l.whl#sha256=7104c1d2c9213a52f1a0545dfecc585b5b6840942df62c54fdbd4a276a5b7636 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,058 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.0-cp35-cp35m-linux_armv7l.whl#sha256=495e32466beb8e1ae74c7f50d1f004945eabb979d5fdaf1f4a3ea000dcb96bf8 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,059 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.5.0-cp35-cp35m-linux_armv6l.whl#sha256=495e32466beb8e1ae74c7f50d1f004945eabb979d5fdaf1f4a3ea000dcb96bf8 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,059 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:53,061 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.9-cp37-cp37m-linux_armv7l.whl#sha256=d6f54f50c0058ae0f9233cd372b87396d3782f0aaddbab217635d0672aa4b262 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,062 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.9-cp37-cp37m-linux_armv6l.whl#sha256=d6f54f50c0058ae0f9233cd372b87396d3782f0aaddbab217635d0672aa4b262 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,062 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.9-cp35-cp35m-linux_armv7l.whl#sha256=535bae04fca6e24ea40c8521192837473e2acf105694933be7fd6d487858632c (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,063 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:53,074 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.6-cp311-cp311-linux_armv6l.whl#sha256=3aaeeaeb963a84434f4bf3ca45ccbd82c5d937093e71e1572f7ff26cebb6ae20 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,074 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.6-cp39-cp39-linux_armv7l.whl#sha256=7d46a4fdcea047d9b8637a04813935beb5e5da741bceb0a1d690a7839080a40a (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,075 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.6-cp39-cp39-linux_armv6l.whl#sha256=7d46a4fdcea047d9b8637a04813935beb5e5da741bceb0a1d690a7839080a40a (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,075 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:53,078 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp311-cp311-linux_armv7l.whl#sha256=272e75997c11353e112c59497e3a803d598ada949d04c94a5d43edf8f90e5202 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,078 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp311-cp311-linux_armv6l.whl#sha256=272e75997c11353e112c59497e3a803d598ada949d04c94a5d43edf8f90e5202 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,079 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp39-cp39-linux_armv7l.whl#sha256=7a71f294832617a72c2b09f4eb56f68efa939808bb13d315d255d45d4fe72b16 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,079 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp39-cp39-linux_armv6l.whl#sha256=7a71f294832617a72c2b09f4eb56f68efa939808bb13d315d255d45d4fe72b16 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,080 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp37-cp37m-linux_armv7l.whl#sha256=d38028f376b07cd6b0230bb58a4c19d5ba837b899cd8ab6640341ddbe00eaf1a (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,081 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp37-cp37m-linux_armv6l.whl#sha256=d38028f376b07cd6b0230bb58a4c19d5ba837b899cd8ab6640341ddbe00eaf1a (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,081 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp35-cp35m-linux_armv7l.whl#sha256=6442245c6774979b47c4e06491b89130ca4a49e4ccbe21dab88a9c62b66c774f (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,082 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.5-cp35-cp35m-linux_armv6l.whl#sha256=6442245c6774979b47c4e06491b89130ca4a49e4ccbe21dab88a9c62b66c774f (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,083 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp311-cp311-linux_armv7l.whl#sha256=805905c20ec5b2ca56f545a1903f22acdaa3af89d1796e20601359e74be563c8 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,083 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp311-cp311-linux_armv6l.whl#sha256=805905c20ec5b2ca56f545a1903f22acdaa3af89d1796e20601359e74be563c8 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,084 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp39-cp39-linux_armv7l.whl#sha256=ecb1d58813e479b6b68b682e7ad8914e31dd13b3b301dd7204a52e89ff165e0b (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,084 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp39-cp39-linux_armv6l.whl#sha256=ecb1d58813e479b6b68b682e7ad8914e31dd13b3b301dd7204a52e89ff165e0b (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,085 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp37-cp37m-linux_armv7l.whl#sha256=f902d886318bef1f63084c8abf048708dcfc1bdf639d67c16f070410c29e12db (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,086 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp37-cp37m-linux_armv6l.whl#sha256=f902d886318bef1f63084c8abf048708dcfc1bdf639d67c16f070410c29e12db (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,086 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp35-cp35m-linux_armv7l.whl#sha256=d74009113ee2e6167359cfc898acf95ba4a712e96633181a090ff7c93925f5ce (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,087 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.4-cp35-cp35m-linux_armv6l.whl#sha256=d74009113ee2e6167359cfc898acf95ba4a712e96633181a090ff7c93925f5ce (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,087 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp311-cp311-linux_armv7l.whl#sha256=11d377c920d577461a07eccaf78ff9f4062d4a8838180369067df65070587cdb (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,088 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp311-cp311-linux_armv6l.whl#sha256=11d377c920d577461a07eccaf78ff9f4062d4a8838180369067df65070587cdb (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,089 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp39-cp39-linux_armv7l.whl#sha256=6d883f4bfcb7f363631a83f8067c8e0bd98d076ff2b69b0cb1792f543139c256 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,089 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp39-cp39-linux_armv6l.whl#sha256=6d883f4bfcb7f363631a83f8067c8e0bd98d076ff2b69b0cb1792f543139c256 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,090 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp37-cp37m-linux_armv7l.whl#sha256=7f334e1ca8c5bca7889987ae1c54c4cfaf43efeb04c4283e5b7344efe680c5e0 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,091 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp37-cp37m-linux_armv6l.whl#sha256=7f334e1ca8c5bca7889987ae1c54c4cfaf43efeb04c4283e5b7344efe680c5e0 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,091 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp35-cp35m-linux_armv7l.whl#sha256=b2677502c3949c461c4e6b1f2dca53fc07af03da210f8aaa0b1cb868cefbf662 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,092 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.4.3-cp35-cp35m-linux_armv6l.whl#sha256=b2677502c3949c461c4e6b1f2dca53fc07af03da210f8aaa0b1cb868cefbf662 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,092 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.7-cp39-cp39-linux_armv7l.whl#sha256=d18908fbee345739936f350997077c40e37e833fe6d7d1321687b24a37f65eda (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,093 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.7-cp39-cp39-linux_armv6l.whl#sha256=d18908fbee345739936f350997077c40e37e833fe6d7d1321687b24a37f65eda (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,093 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.4-cp39-cp39-linux_armv7l.whl#sha256=46bbb0f09c704cd8ab8011fad111e08a607fd5f064fa0041f56ec1c62b8e74c6 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,094 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.4-cp39-cp39-linux_armv6l.whl#sha256=46bbb0f09c704cd8ab8011fad111e08a607fd5f064fa0041f56ec1c62b8e74c6 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,095 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.2-cp39-cp39-linux_armv7l.whl#sha256=39a8c7fb3ec3f9763f6805693416f2c075f33692d8523980a858d067fe9c69e9 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,095 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.2-cp39-cp39-linux_armv6l.whl#sha256=39a8c7fb3ec3f9763f6805693416f2c075f33692d8523980a858d067fe9c69e9 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,096 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.2.1-cp39-cp39-linux_armv7l.whl#sha256=8645b322266bef190cd2cc053a0943d9bb5b400f493ae0a4fb479dbcc4180950 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,096 Skipping link: No binaries permitted for gemmi: 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2023-09-15T09:18:53,099 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.6-cp39-cp39-linux_armv6l.whl#sha256=23b75d17c30e0c453b94a79caab48a631c94404b92d2416a8acdf91ecb68c329 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,099 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.6-cp35-cp35m-linux_armv6l.whl#sha256=77f0f92c7f827784be41462b3969ebc0ad0b49796c999503f2633c2f476a18de (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,100 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.6-cp35-cp35m-linux_armv7l.whl#sha256=77f0f92c7f827784be41462b3969ebc0ad0b49796c999503f2633c2f476a18de (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,100 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.5-cp39-cp39-linux_armv7l.whl#sha256=c8b98718817bb2bce5cae6905eec804b07e480eb6a77265fa85c5fe8e3a759dc (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,101 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.5-cp39-cp39-linux_armv6l.whl#sha256=c8b98718817bb2bce5cae6905eec804b07e480eb6a77265fa85c5fe8e3a759dc (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,102 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.5-cp35-cp35m-linux_armv7l.whl#sha256=22b6cb0c5699f26be92623b5d8bd5e48c4252e647379c9259837689a13f069b8 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,102 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.5-cp35-cp35m-linux_armv6l.whl#sha256=22b6cb0c5699f26be92623b5d8bd5e48c4252e647379c9259837689a13f069b8 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,103 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.4-cp39-cp39-linux_armv7l.whl#sha256=f7084d7d7c2387e74a7745b09eb5311a55cd2d8effa42e3234b63173cac6ed4d (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,104 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.4-cp39-cp39-linux_armv6l.whl#sha256=f7084d7d7c2387e74a7745b09eb5311a55cd2d8effa42e3234b63173cac6ed4d (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,104 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.3-cp35-cp35m-linux_armv6l.whl#sha256=43cdde23b2327d4232b8dc272394d07e1ef9244fa065cd3a5098a832b7de5ec6 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,105 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.3-cp35-cp35m-linux_armv7l.whl#sha256=43cdde23b2327d4232b8dc272394d07e1ef9244fa065cd3a5098a832b7de5ec6 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,105 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.2-cp35-cp35m-linux_armv7l.whl#sha256=a6d8bd66cc25d6b9604268b1b1602fd3e3128f5bd756f797d117b79de41bbaa3 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,106 Skipping link: No binaries permitted for gemmi: https://www.piwheels.org/simple/gemmi/gemmi-0.1.2-cp35-cp35m-linux_armv6l.whl#sha256=a6d8bd66cc25d6b9604268b1b1602fd3e3128f5bd756f797d117b79de41bbaa3 (from https://www.piwheels.org/simple/gemmi/) 2023-09-15T09:18:53,106 Skipping link: not a file: https://www.piwheels.org/simple/gemmi/ 2023-09-15T09:18:53,107 Skipping link: not a file: https://pypi.org/simple/gemmi/ 2023-09-15T09:18:53,130 Given no hashes to check 1 links for project 'gemmi': discarding no candidates 2023-09-15T09:18:53,148 Collecting gemmi==0.5.0 2023-09-15T09:18:53,150 Created temporary directory: /tmp/pip-unpack-kimieqna 2023-09-15T09:18:53,302 Downloading gemmi-0.5.0.tar.gz (671 kB) 2023-09-15T09:18:53,992 Added gemmi==0.5.0 from https://files.pythonhosted.org/packages/76/6f/0f81a068de2ac6f7153b9590888c29247a3ca23d1b3e5f54e9aab3f90eda/gemmi-0.5.0.tar.gz to build tracker '/tmp/pip-build-tracker-ss4zf_6h' 2023-09-15T09:18:53,996 Running setup.py (path:/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/setup.py) egg_info for package gemmi 2023-09-15T09:18:53,998 Created temporary directory: /tmp/pip-pip-egg-info-_mkotm7m 2023-09-15T09:18:53,999 Preparing metadata (setup.py): started 2023-09-15T09:18:54,000 Running command python setup.py egg_info 2023-09-15T09:18:54,852 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2023-09-15T09:18:54,853 !! 2023-09-15T09:18:54,854 ******************************************************************************** 2023-09-15T09:18:54,854 Requirements should be satisfied by a PEP 517 installer. 2023-09-15T09:18:54,855 If you are using pip, you can try `pip install --use-pep517`. 2023-09-15T09:18:54,856 ******************************************************************************** 2023-09-15T09:18:54,857 !! 2023-09-15T09:18:54,857 dist.fetch_build_eggs(dist.setup_requires) 2023-09-15T09:18:57,601 running egg_info 2023-09-15T09:18:57,602 creating /tmp/pip-pip-egg-info-_mkotm7m/gemmi.egg-info 2023-09-15T09:18:57,628 writing /tmp/pip-pip-egg-info-_mkotm7m/gemmi.egg-info/PKG-INFO 2023-09-15T09:18:57,631 writing dependency_links to /tmp/pip-pip-egg-info-_mkotm7m/gemmi.egg-info/dependency_links.txt 2023-09-15T09:18:57,633 writing top-level names to /tmp/pip-pip-egg-info-_mkotm7m/gemmi.egg-info/top_level.txt 2023-09-15T09:18:57,635 writing manifest file '/tmp/pip-pip-egg-info-_mkotm7m/gemmi.egg-info/SOURCES.txt' 2023-09-15T09:18:57,748 reading manifest file '/tmp/pip-pip-egg-info-_mkotm7m/gemmi.egg-info/SOURCES.txt' 2023-09-15T09:18:57,750 reading manifest template 'MANIFEST.in' 2023-09-15T09:18:57,844 adding license file 'LICENSE.txt' 2023-09-15T09:18:57,857 writing manifest file '/tmp/pip-pip-egg-info-_mkotm7m/gemmi.egg-info/SOURCES.txt' 2023-09-15T09:18:57,969 Preparing metadata (setup.py): finished with status 'done' 2023-09-15T09:18:57,972 Source in /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450 has version 0.5.0, which satisfies requirement gemmi==0.5.0 from https://files.pythonhosted.org/packages/76/6f/0f81a068de2ac6f7153b9590888c29247a3ca23d1b3e5f54e9aab3f90eda/gemmi-0.5.0.tar.gz 2023-09-15T09:18:57,973 Removed gemmi==0.5.0 from https://files.pythonhosted.org/packages/76/6f/0f81a068de2ac6f7153b9590888c29247a3ca23d1b3e5f54e9aab3f90eda/gemmi-0.5.0.tar.gz from build tracker '/tmp/pip-build-tracker-ss4zf_6h' 2023-09-15T09:18:57,977 Created temporary directory: /tmp/pip-unpack-s2pxclij 2023-09-15T09:18:57,978 Created temporary directory: /tmp/pip-unpack-_g4ju0ds 2023-09-15T09:18:57,980 Building wheels for collected packages: gemmi 2023-09-15T09:18:57,984 Created temporary directory: /tmp/pip-wheel-j7mwzb5m 2023-09-15T09:18:57,985 Building wheel for gemmi (setup.py): started 2023-09-15T09:18:57,986 Destination directory: /tmp/pip-wheel-j7mwzb5m 2023-09-15T09:18:57,986 Running command python setup.py bdist_wheel 2023-09-15T09:18:58,828 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2023-09-15T09:18:58,829 !! 2023-09-15T09:18:58,829 ******************************************************************************** 2023-09-15T09:18:58,830 Requirements should be satisfied by a PEP 517 installer. 2023-09-15T09:18:58,830 If you are using pip, you can try `pip install --use-pep517`. 2023-09-15T09:18:58,831 ******************************************************************************** 2023-09-15T09:18:58,832 !! 2023-09-15T09:18:58,833 dist.fetch_build_eggs(dist.setup_requires) 2023-09-15T09:18:59,180 running bdist_wheel 2023-09-15T09:18:59,258 running build 2023-09-15T09:18:59,258 running build_py 2023-09-15T09:18:59,288 creating build 2023-09-15T09:18:59,289 creating build/lib.linux-armv7l-cpython-311 2023-09-15T09:18:59,289 creating build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,291 copying examples/hello.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,292 copying examples/cif_i_sigi.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,294 copying examples/ccd_subgraph.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,296 copying examples/simple_search.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,298 copying examples/col_order.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,299 copying examples/maskcheck.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,301 copying examples/ccd_gi.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,303 copying examples/aafreq.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,305 copying examples/monomers.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,307 copying examples/long_geom.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,309 copying examples/map2mtz.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,310 copying examples/__main__.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,312 copying examples/__init__.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,314 copying examples/merge_mtz_mmcif.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,315 copying examples/from_json.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,317 copying examples/mtz_i_sigi.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,319 copying examples/maskdiff.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,320 copying examples/rama_gather.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,322 copying examples/rama_plot.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,324 copying examples/weight.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,326 copying examples/mtrix_iso.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,327 copying examples/patterson_slice.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,329 copying examples/multiproc.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,330 copying examples/matthews.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,332 copying examples/sub_ccd.py -> build/lib.linux-armv7l-cpython-311/gemmi-examples 2023-09-15T09:18:59,335 running build_clib 2023-09-15T09:18:59,368 building 'gemmi_zlib' library 2023-09-15T09:18:59,369 creating build/temp.linux-armv7l-cpython-311 2023-09-15T09:18:59,369 creating build/temp.linux-armv7l-cpython-311/third_party 2023-09-15T09:18:59,370 creating build/temp.linux-armv7l-cpython-311/third_party/zlib 2023-09-15T09:18:59,371 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/adler32.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/adler32.o 2023-09-15T09:18:59,717 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/crc32.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/crc32.o 2023-09-15T09:19:00,160 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/gzlib.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/gzlib.o 2023-09-15T09:19:00,639 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/gzread.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/gzread.o 2023-09-15T09:19:01,237 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/inffast.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/inffast.o 2023-09-15T09:19:01,651 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/inflate.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/inflate.o 2023-09-15T09:19:03,757 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/inftrees.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/inftrees.o 2023-09-15T09:19:04,114 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNO_GZCOMPRESS=1 -DZ_HAVE_UNISTD_H=1 -c third_party/zlib/zutil.c -o build/temp.linux-armv7l-cpython-311/third_party/zlib/zutil.o 2023-09-15T09:19:04,281 arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-311/libgemmi_zlib.a build/temp.linux-armv7l-cpython-311/third_party/zlib/adler32.o build/temp.linux-armv7l-cpython-311/third_party/zlib/crc32.o build/temp.linux-armv7l-cpython-311/third_party/zlib/gzlib.o build/temp.linux-armv7l-cpython-311/third_party/zlib/gzread.o build/temp.linux-armv7l-cpython-311/third_party/zlib/inffast.o build/temp.linux-armv7l-cpython-311/third_party/zlib/inflate.o build/temp.linux-armv7l-cpython-311/third_party/zlib/inftrees.o build/temp.linux-armv7l-cpython-311/third_party/zlib/zutil.o 2023-09-15T09:19:04,306 running build_ext 2023-09-15T09:19:04,310 creating tmp 2023-09-15T09:19:04,310 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c /tmp/tmpcl_x6_m_.cpp -o tmp/tmpcl_x6_m_.o -std=c++17 2023-09-15T09:19:04,401 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c /tmp/tmprw50jhn8.cpp -o tmp/tmprw50jhn8.o -fvisibility=hidden 2023-09-15T09:19:04,507 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c /tmp/tmpye1p6020.cpp -o tmp/tmpye1p6020.o -g0 2023-09-15T09:19:04,612 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c /tmp/tmpkyt6axla.cpp -o tmp/tmpkyt6axla.o -Wl,-s 2023-09-15T09:19:05,231 building 'gemmi' extension 2023-09-15T09:19:05,241 creating build/temp.linux-armv7l-cpython-311/python 2023-09-15T09:19:05,242 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/align.cpp -o build/temp.linux-armv7l-cpython-311/python/align.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:19:35,532 In file included from /usr/include/c++/12/vector:70, 2023-09-15T09:19:35,532 from include/gemmi/model.hpp:15, 2023-09-15T09:19:35,533 from include/gemmi/align.hpp:8, 2023-09-15T09:19:35,533 from python/align.cpp:3: 2023-09-15T09:19:35,534 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator, iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-15T09:19:35,535 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:19:35,535 189 | vector<_Tp, _Alloc>:: 2023-09-15T09:19:35,536 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:19:35,537 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:19:38,185 In file included from /usr/include/c++/12/vector:64: 2023-09-15T09:19:38,186 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-15T09:19:38,187 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Atom; F = Selection::remove_not_selected(gemmi::Residue&) const::]’ at include/gemmi/util.hpp:232:10, 2023-09-15T09:19:38,187 inlined from ‘void gemmi::Selection::remove_not_selected(T&) const [with T = gemmi::Residue]’ at include/gemmi/select.hpp:273:21, 2023-09-15T09:19:38,188 inlined from ‘void gemmi::Selection::remove_not_selected(T&) const [with T = gemmi::Chain]’ at include/gemmi/select.hpp:275:26, 2023-09-15T09:19:38,189 inlined from ‘void gemmi::Selection::remove_not_selected(T&) const [with T = gemmi::Model]’ at include/gemmi/select.hpp:275:26: 2023-09-15T09:19:38,189 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:19:38,190 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-15T09:19:38,190 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:19:38,701 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-15T09:19:38,701 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Atom; F = Selection::remove_selected(gemmi::Residue&) const::]’ at include/gemmi/util.hpp:232:10, 2023-09-15T09:19:38,702 inlined from ‘void gemmi::Selection::remove_selected(gemmi::Residue&) const’ at include/gemmi/select.hpp:268:23, 2023-09-15T09:19:38,702 inlined from ‘void gemmi::Selection::remove_selected(T&) const [with T = gemmi::Chain]’ at include/gemmi/select.hpp:259:24, 2023-09-15T09:19:38,703 inlined from ‘void gemmi::Selection::remove_selected(T&) const [with T = gemmi::Model]’ at include/gemmi/select.hpp:259:24: 2023-09-15T09:19:38,704 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:19:38,704 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-15T09:19:38,705 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:19:41,674 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Position&}; _Tp = gemmi::Position; _Alloc = std::allocator]’: 2023-09-15T09:19:41,675 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:19:41,676 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:19:41,676 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:19:42,411 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Selection::AtomInequality}; _Tp = gemmi::Selection::AtomInequality; _Alloc = std::allocator]’: 2023-09-15T09:19:42,412 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:19:47,602 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Position; _Alloc = std::allocator]’, 2023-09-15T09:19:47,602 inlined from ‘gemmi::SupResult gemmi::calculate_superposition(ConstResidueSpan, ConstResidueSpan, PolymerType, SupSelect, int, double, char, bool)’ at include/gemmi/align.hpp:181:27: 2023-09-15T09:19:47,603 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:19:47,604 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:19:47,605 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:19:47,605 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Position; _Alloc = std::allocator]’, 2023-09-15T09:19:47,606 inlined from ‘gemmi::SupResult gemmi::calculate_superposition(ConstResidueSpan, ConstResidueSpan, PolymerType, SupSelect, int, double, char, bool)’ at include/gemmi/align.hpp:182:27: 2023-09-15T09:19:47,607 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:19:47,608 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:19:47,608 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:19:47,609 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Position; _Alloc = std::allocator]’, 2023-09-15T09:19:47,609 inlined from ‘gemmi::SupResult gemmi::calculate_superposition(ConstResidueSpan, ConstResidueSpan, PolymerType, SupSelect, int, double, char, bool)’ at include/gemmi/align.hpp:188:31: 2023-09-15T09:19:47,610 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:19:47,610 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:19:47,611 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:19:47,611 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Position; _Alloc = std::allocator]’, 2023-09-15T09:19:47,612 inlined from ‘gemmi::SupResult gemmi::calculate_superposition(ConstResidueSpan, ConstResidueSpan, PolymerType, SupSelect, int, double, char, bool)’ at include/gemmi/align.hpp:189:31: 2023-09-15T09:19:47,612 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:19:47,613 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:19:47,614 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:19:50,635 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Selection::AtomInequality}; _Tp = gemmi::Selection::AtomInequality; _Alloc = std::allocator]’, 2023-09-15T09:19:50,636 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Selection::AtomInequality; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:19:50,636 inlined from ‘void gemmi::impl::parse_cid(const std::string&, gemmi::Selection&)’ at include/gemmi/select.hpp:438:40: 2023-09-15T09:19:50,637 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:19:50,638 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:19:50,638 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:19:57,823 In file included from python/common.h:3, 2023-09-15T09:19:57,824 from python/align.cpp:7: 2023-09-15T09:19:57,825 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access, gemmi::Atom> >, gemmi::Atom&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = gemmi::BidirIterator, gemmi::Atom> >; Sentinel = gemmi::BidirIterator, gemmi::Atom> >; ValueType = gemmi::Atom&; Extra = {}]’: 2023-09-15T09:19:57,826 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-15T09:19:57,827 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-15T09:19:57,828 | ^~~~~~~~~~~~~~~~~~ 2023-09-15T09:19:57,829 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-15T09:19:57,898 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = gemmi::BidirIterator, gemmi::Atom> >; Sentinel = gemmi::BidirIterator, gemmi::Atom> >; ValueType = gemmi::Atom&; Extra = {}]’, 2023-09-15T09:19:57,899 inlined from ‘pybind11::iterator pybind11::make_iterator(Type&, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Type = gemmi::FilterProxy; Extra = {}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2457:74: 2023-09-15T09:19:57,899 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-15T09:19:57,900 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:19:57,901 | ^ 2023-09-15T09:19:57,901 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-15T09:20:00,373 In file included from /usr/include/c++/12/vector:63: 2023-09-15T09:20:00,374 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*]’: 2023-09-15T09:20:00,374 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:00,375 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:20:00,376 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:20:00,376 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:00,482 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*]’: 2023-09-15T09:20:00,483 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:00,484 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:06,475 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’: 2023-09-15T09:20:06,476 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:06,477 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:06,637 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:06,638 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:06,638 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; _Tp = gemmi::ExperimentInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:06,639 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:20:06,640 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-15T09:20:06,640 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:06,641 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:06,641 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:06,812 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Atom}; _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-15T09:20:06,813 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:20:06,814 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:20:06,815 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:07,036 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Atom}; _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-15T09:20:07,037 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:20:07,037 inlined from ‘void gemmi::Selection::add_matching_children(const T&, T&) const [with T = gemmi::Residue]’ at include/gemmi/select.hpp:233:36, 2023-09-15T09:20:07,038 inlined from ‘void gemmi::Selection::add_matching_children(const T&, T&) const [with T = gemmi::Chain]’ at include/gemmi/select.hpp:234:30, 2023-09-15T09:20:07,039 inlined from ‘void gemmi::Selection::add_matching_children(const T&, T&) const [with T = gemmi::Model]’ at include/gemmi/select.hpp:234:30: 2023-09-15T09:20:07,039 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:07,040 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:20:07,040 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:07,516 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Position; _Alloc = std::allocator]’, 2023-09-15T09:20:07,517 inlined from ‘bool pybind11::detail::list_caster::load(pybind11::handle, bool) [with Type = std::vector; Value = gemmi::Position]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl.h:180:28: 2023-09-15T09:20:07,517 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:07,518 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:20:07,519 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:20:08,085 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2023-09-15T09:20:08,086 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:20:08,087 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:20:08,088 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:08,157 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, 2023-09-15T09:20:08,157 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:20:08,158 inlined from ‘bool pybind11::detail::list_caster::load(pybind11::handle, bool) [with Type = std::vector; Value = double]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl.h:180:28: 2023-09-15T09:20:08,159 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:08,160 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:20:08,160 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:09,415 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*]’: 2023-09-15T09:20:09,415 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:09,416 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:20:09,417 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:20:09,417 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:09,499 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:09,500 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:09,500 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*; _Tp = gemmi::RefinementInfo::Restr]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:09,501 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:20:09,502 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-15T09:20:09,502 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:09,503 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:09,504 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:09,589 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*]’: 2023-09-15T09:20:09,590 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:09,591 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:20:09,591 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:20:09,592 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:09,640 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’: 2023-09-15T09:20:09,641 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:09,642 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:09,642 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:09,643 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:09,643 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*; _Tp = gemmi::DiffractionInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:09,644 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:20:09,644 inlined from ‘gemmi::CrystalInfo::CrystalInfo(const gemmi::CrystalInfo&)’ at include/gemmi/metadata.hpp:79:8, 2023-09-15T09:20:09,645 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::CrystalInfo; _Args = {const gemmi::CrystalInfo&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-15T09:20:09,646 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21: 2023-09-15T09:20:09,647 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:09,647 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:09,648 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:09,752 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:09,753 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:09,753 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*; _Tp = gemmi::DiffractionInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:09,754 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:20:09,755 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-15T09:20:09,755 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:09,756 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:09,756 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:09,973 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:09,974 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:09,975 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; _Tp = gemmi::CrystalInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:09,976 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:20:09,976 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-15T09:20:09,977 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:09,978 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:09,978 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:09,979 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:09,980 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:09,981 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::DiffractionInfo*; _Tp = gemmi::DiffractionInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:09,981 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:20:09,982 inlined from ‘gemmi::CrystalInfo::CrystalInfo(const gemmi::CrystalInfo&)’ at include/gemmi/metadata.hpp:79:8, 2023-09-15T09:20:09,983 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::CrystalInfo; _Args = {gemmi::CrystalInfo&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-15T09:20:09,983 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::CrystalInfo*; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21, 2023-09-15T09:20:09,984 inlined from ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::CrystalInfo*; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’ at /usr/include/c++/12/bits/stl_uninitialized.h:137:32, 2023-09-15T09:20:09,984 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::CrystalInfo*; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:09,985 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = gemmi::CrystalInfo*; _ForwardIterator = gemmi::CrystalInfo*; _Tp = gemmi::CrystalInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:09,986 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:251:35: 2023-09-15T09:20:09,986 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:09,987 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:09,988 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:10,139 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’: 2023-09-15T09:20:10,139 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:10,140 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:20:10,141 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:20:10,142 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:10,219 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:10,220 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:10,221 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:10,221 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:20:10,222 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-15T09:20:10,222 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:10,223 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:10,224 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:10,302 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:10,302 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:10,303 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:10,304 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:20:10,304 inlined from ‘gemmi::Assembly::Gen::Gen(const gemmi::Assembly::Gen&)’ at include/gemmi/metadata.hpp:312:10, 2023-09-15T09:20:10,305 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::Assembly::Gen; _Args = {const gemmi::Assembly::Gen&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-15T09:20:10,306 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Gen*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21: 2023-09-15T09:20:10,306 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:10,307 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:10,307 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:10,474 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:10,475 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:10,476 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:10,476 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:20:10,477 inlined from ‘gemmi::Assembly::Gen::Gen(const gemmi::Assembly::Gen&)’ at include/gemmi/metadata.hpp:312:10, 2023-09-15T09:20:10,478 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::Assembly::Gen; _Args = {gemmi::Assembly::Gen&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-15T09:20:10,478 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21, 2023-09-15T09:20:10,479 inlined from ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*; bool _TrivialValueTypes = false]’ at /usr/include/c++/12/bits/stl_uninitialized.h:137:32, 2023-09-15T09:20:10,480 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:10,480 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*; _Tp = gemmi::Assembly::Gen]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:10,481 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Gen; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:251:35: 2023-09-15T09:20:10,482 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:10,483 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:10,483 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:10,632 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’: 2023-09-15T09:20:10,633 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:10,634 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:20:10,634 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:20:10,635 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:10,857 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’: 2023-09-15T09:20:10,858 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:10,858 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:10,936 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:10,937 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:10,937 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo::Restr*; _Tp = gemmi::RefinementInfo::Restr]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:10,938 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:20:10,939 inlined from ‘gemmi::RefinementInfo::RefinementInfo(const gemmi::RefinementInfo&)’ at include/gemmi/metadata.hpp:117:8: 2023-09-15T09:20:10,940 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:10,940 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:10,941 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:10,941 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:10,942 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:10,942 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; _Tp = gemmi::TlsGroup]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:10,943 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:20:10,943 inlined from ‘gemmi::RefinementInfo::RefinementInfo(const gemmi::RefinementInfo&)’ at include/gemmi/metadata.hpp:117:8: 2023-09-15T09:20:10,944 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:10,945 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:10,945 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:11,010 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’: 2023-09-15T09:20:11,010 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:11,011 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:20:11,012 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:20:11,012 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:11,056 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:11,057 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:11,057 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; _Tp = gemmi::ExperimentInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:11,058 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:20:11,059 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-15T09:20:11,059 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:11,060 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:11,060 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:11,061 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:11,062 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:11,062 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; _Tp = gemmi::CrystalInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:11,063 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:20:11,063 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-15T09:20:11,064 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:11,065 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:11,065 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:11,066 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:11,067 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:11,067 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; _Tp = gemmi::RefinementInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:11,068 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:20:11,069 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-15T09:20:11,069 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:11,070 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:11,070 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:11,206 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:11,207 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:11,207 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; _Tp = gemmi::NcsOp]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:11,208 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:20:11,209 inlined from ‘gemmi::Structure::Structure(const gemmi::Structure&)’ at include/gemmi/model.hpp:852:8: 2023-09-15T09:20:11,209 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:11,210 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:11,211 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:11,211 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:11,212 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:11,213 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; _Tp = gemmi::Connection]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:11,213 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:20:11,214 inlined from ‘gemmi::Structure::Structure(const gemmi::Structure&)’ at include/gemmi/model.hpp:852:8: 2023-09-15T09:20:11,215 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:11,215 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:11,216 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:11,217 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:11,217 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:11,218 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; _Tp = gemmi::Assembly]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:11,218 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:20:11,219 inlined from ‘gemmi::Structure::Structure(const gemmi::Structure&)’ at include/gemmi/model.hpp:852:8: 2023-09-15T09:20:11,220 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:11,220 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:11,221 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:11,435 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:11,436 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:11,436 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; _Tp = gemmi::TlsGroup]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:11,437 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:20:11,437 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-15T09:20:11,438 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:11,439 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:11,439 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:12,657 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:12,657 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:12,658 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; _Tp = gemmi::NcsOp]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:12,658 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:20:12,659 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44, 2023-09-15T09:20:12,660 inlined from ‘gemmi::Structure gemmi::Structure::empty_copy() const’ at include/gemmi/model.hpp:978:14: 2023-09-15T09:20:12,660 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:12,661 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:12,662 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:12,662 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:12,663 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:12,664 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; _Tp = gemmi::Connection]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:12,665 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:20:12,665 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44, 2023-09-15T09:20:12,666 inlined from ‘gemmi::Structure gemmi::Structure::empty_copy() const’ at include/gemmi/model.hpp:980:22: 2023-09-15T09:20:12,666 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:12,667 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:12,667 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:12,671 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:12,671 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:12,672 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; _Tp = gemmi::Assembly]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:12,673 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:20:12,673 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44, 2023-09-15T09:20:12,674 inlined from ‘gemmi::Structure gemmi::Structure::empty_copy() const’ at include/gemmi/model.hpp:983:21: 2023-09-15T09:20:12,675 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:12,675 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:12,676 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:12,677 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; bool _TrivialValueTypes = false]’, 2023-09-15T09:20:12,677 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:20:12,679 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; _Tp = gemmi::RefinementInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:20:12,679 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:20:12,680 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44, 2023-09-15T09:20:12,681 inlined from ‘gemmi::Metadata& gemmi::Metadata::operator=(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8, 2023-09-15T09:20:12,682 inlined from ‘gemmi::Structure gemmi::Structure::empty_copy() const’ at include/gemmi/model.hpp:984:15: 2023-09-15T09:20:12,682 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:20:12,683 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:20:12,684 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:20:14,420 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/ccp4.cpp -o build/temp.linux-armv7l-cpython-311/python/ccp4.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:20:56,415 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/chemcomp.cpp -o build/temp.linux-armv7l-cpython-311/python/chemcomp.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:21:40,644 In file included from /usr/include/c++/12/vector:70, 2023-09-15T09:21:40,644 from include/gemmi/chemcomp.hpp:10, 2023-09-15T09:21:40,645 from python/chemcomp.cpp:3: 2023-09-15T09:21:40,646 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator, iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-15T09:21:40,647 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:21:40,647 189 | vector<_Tp, _Alloc>:: 2023-09-15T09:21:40,648 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:21:40,649 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:21:41,156 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator, iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-15T09:21:41,156 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:21:41,157 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:21:41,377 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator, iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-15T09:21:41,378 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:21:41,379 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:21:41,633 In file included from /usr/include/c++/12/string:50, 2023-09-15T09:21:41,634 from include/gemmi/chemcomp.hpp:9: 2023-09-15T09:21:41,634 /usr/include/c++/12/bits/stl_algobase.h: In function ‘_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >(const std::__cxx11::basic_string&, const std::__cxx11::basic_string&):: >]’: 2023-09-15T09:21:41,635 /usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:21:41,636 2059 | __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last, 2023-09-15T09:21:41,636 | ^~~~~~~~~ 2023-09-15T09:21:41,637 /usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:21:43,212 In file included from /usr/include/c++/12/vector:64: 2023-09-15T09:21:43,213 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:21:43,214 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Restraints::Bond; F = ChemComp::remove_nonmatching_restraints()::]’ at include/gemmi/util.hpp:232:10, 2023-09-15T09:21:43,214 inlined from ‘void gemmi::ChemComp::remove_nonmatching_restraints()’ at include/gemmi/chemcomp.hpp:350:21: 2023-09-15T09:21:43,215 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:21:43,216 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-15T09:21:43,216 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:21:43,217 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-15T09:21:43,218 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Restraints::Angle; F = ChemComp::remove_nonmatching_restraints()::]’ at include/gemmi/util.hpp:232:10, 2023-09-15T09:21:43,218 inlined from ‘void gemmi::ChemComp::remove_nonmatching_restraints()’ at include/gemmi/chemcomp.hpp:354:21: 2023-09-15T09:21:43,219 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:21:43,220 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-15T09:21:43,220 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:21:43,221 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-15T09:21:43,221 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Restraints::Torsion; F = ChemComp::remove_nonmatching_restraints()::]’ at include/gemmi/util.hpp:232:10, 2023-09-15T09:21:43,222 inlined from ‘void gemmi::ChemComp::remove_nonmatching_restraints()’ at include/gemmi/chemcomp.hpp:359:21: 2023-09-15T09:21:43,223 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:21:43,223 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-15T09:21:43,224 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:21:47,324 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’: 2023-09-15T09:21:47,324 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:21:47,324 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:21:47,325 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:21:47,381 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’: 2023-09-15T09:21:47,382 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:21:47,382 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:21:47,383 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:21:47,591 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-15T09:21:47,592 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:21:47,593 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:21:47,594 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:21:53,436 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:21:53,436 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:21:53,437 inlined from ‘gemmi::ChemComp gemmi::make_chemcomp_from_block(const cif::Block&)’ at include/gemmi/chemcomp.hpp:477:26: 2023-09-15T09:21:53,438 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:21:53,438 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:21:53,439 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:21:54,719 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-15T09:21:54,719 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:21:54,720 739 | vector<_Tp, _Alloc>:: 2023-09-15T09:21:54,720 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:21:54,721 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:21:54,722 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:03,847 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Bond&}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-15T09:22:03,848 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:22:03,849 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:22:03,850 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:04,011 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-15T09:22:04,012 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:22:04,012 133 | vector<_Tp, _Alloc>:: 2023-09-15T09:22:04,013 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:04,014 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:04,014 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-15T09:22:04,015 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:04,119 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-15T09:22:04,120 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:22:04,120 175 | vector<_Tp, _Alloc>:: 2023-09-15T09:22:04,121 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:04,275 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Angle&}; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-15T09:22:04,276 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:22:04,276 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:22:04,277 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:04,417 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-15T09:22:04,418 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:22:04,418 133 | vector<_Tp, _Alloc>:: 2023-09-15T09:22:04,419 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:04,419 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:04,420 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-15T09:22:04,420 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:04,609 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-15T09:22:04,610 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:22:04,611 739 | vector<_Tp, _Alloc>:: 2023-09-15T09:22:04,611 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:04,612 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:04,613 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:04,788 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-15T09:22:04,788 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:22:04,789 175 | vector<_Tp, _Alloc>:: 2023-09-15T09:22:04,790 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:04,991 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Torsion&}; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-15T09:22:04,992 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:22:04,992 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:22:04,993 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:05,209 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-15T09:22:05,210 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:22:05,211 133 | vector<_Tp, _Alloc>:: 2023-09-15T09:22:05,211 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:05,212 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:05,213 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-15T09:22:05,214 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:05,512 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-15T09:22:05,513 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:22:05,514 739 | vector<_Tp, _Alloc>:: 2023-09-15T09:22:05,514 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:05,515 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:05,516 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:05,705 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-15T09:22:05,706 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:22:05,707 175 | vector<_Tp, _Alloc>:: 2023-09-15T09:22:05,707 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:06,649 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’: 2023-09-15T09:22:06,649 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:22:14,871 In file included from python/common.h:3, 2023-09-15T09:22:14,871 from python/chemcomp.cpp:6: 2023-09-15T09:22:14,872 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Restraints::Bond&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Bond&; Extra = {}]’: 2023-09-15T09:22:14,873 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:14,874 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-15T09:22:14,874 | ^~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:14,875 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:14,995 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Restraints::Angle&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Angle&; Extra = {}]’: 2023-09-15T09:22:14,996 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:14,997 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:15,120 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Restraints::Torsion&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Torsion&; Extra = {}]’: 2023-09-15T09:22:15,120 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:15,121 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:15,367 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Restraints::Plane&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Plane&; Extra = {}]’: 2023-09-15T09:22:15,368 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:15,369 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:16,655 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-15T09:22:16,656 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-15T09:22:16,657 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:16,657 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:16,658 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:16,659 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:16,660 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:16,662 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:16,662 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:16,663 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-15T09:22:16,663 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-15T09:22:16,664 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:16,664 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:16,665 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:16,666 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:16,667 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:16,668 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:16,668 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:17,273 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-15T09:22:17,273 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-15T09:22:17,274 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:17,274 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:17,275 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:17,276 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:17,277 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:17,277 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:17,278 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:17,279 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-15T09:22:17,279 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-15T09:22:17,280 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:17,280 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:17,281 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:17,282 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:17,283 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:17,283 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:17,284 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:17,506 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-15T09:22:17,506 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-15T09:22:17,507 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:17,508 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:22:17,508 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:17,509 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:17,510 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:17,511 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:22:17,511 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:22:17,512 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-15T09:22:17,512 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-15T09:22:17,513 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:17,514 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:22:17,514 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:17,515 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:17,516 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:17,516 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:22:17,517 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:22:17,590 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-15T09:22:17,591 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-15T09:22:17,592 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-15T09:22:17,593 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:17,593 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:17,594 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:17,595 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:17,596 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:22:17,596 1779 | _M_range_insert(__pos, __first, __last, 2023-09-15T09:22:17,597 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:17,598 1780 | std::__iterator_category(__first)); 2023-09-15T09:22:17,598 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:17,599 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:17,600 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-15T09:22:17,600 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-15T09:22:17,601 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-15T09:22:17,602 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:17,602 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:17,603 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:17,604 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:17,604 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:22:17,605 1779 | _M_range_insert(__pos, __first, __last, 2023-09-15T09:22:17,606 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:17,606 1780 | std::__iterator_category(__first)); 2023-09-15T09:22:17,607 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:17,607 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:17,692 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-15T09:22:17,693 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-15T09:22:17,694 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Restraints::Torsion&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:17,694 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Restraints::Torsion&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:17,695 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Torsion&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Torsion&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:17,696 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Torsion&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Torsion&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:17,696 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:17,697 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:22:17,698 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:22:17,698 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-15T09:22:17,699 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-15T09:22:17,700 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Restraints::Torsion&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:17,700 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Restraints::Torsion&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:17,701 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Torsion&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Torsion&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:17,702 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Torsion&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Torsion&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:17,703 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:17,703 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:22:17,704 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:22:17,758 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-15T09:22:17,759 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-15T09:22:17,759 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:17,760 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:17,761 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:17,762 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:17,762 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:17,763 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:17,763 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:17,764 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-15T09:22:17,765 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-15T09:22:17,765 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:17,766 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:17,766 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:17,767 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:17,768 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:17,769 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:17,769 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:17,976 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-15T09:22:17,976 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-15T09:22:17,977 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:17,978 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:22:17,979 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:17,979 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:17,980 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:17,981 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:22:17,982 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:22:17,982 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-15T09:22:17,983 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-15T09:22:17,984 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:17,985 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:22:17,985 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:17,986 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:17,987 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:17,988 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:22:17,989 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:22:18,058 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-15T09:22:18,059 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-15T09:22:18,059 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-15T09:22:18,060 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:18,061 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:18,062 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:18,062 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:18,063 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:22:18,064 1779 | _M_range_insert(__pos, __first, __last, 2023-09-15T09:22:18,065 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:18,065 1780 | std::__iterator_category(__first)); 2023-09-15T09:22:18,066 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:18,067 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:18,068 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-15T09:22:18,068 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-15T09:22:18,069 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-15T09:22:18,070 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:18,071 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:18,071 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:18,072 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:18,073 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:22:18,074 1779 | _M_range_insert(__pos, __first, __last, 2023-09-15T09:22:18,074 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:18,075 1780 | std::__iterator_category(__first)); 2023-09-15T09:22:18,076 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:18,076 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:18,157 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-15T09:22:18,158 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-15T09:22:18,158 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Restraints::Angle&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:18,159 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Restraints::Angle&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:18,160 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Angle&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Angle&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:18,160 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Angle&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Angle&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:18,161 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:18,162 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:22:18,163 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:22:18,163 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-15T09:22:18,164 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-15T09:22:18,164 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Restraints::Angle&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:18,165 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Restraints::Angle&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:18,166 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Angle&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Angle&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:18,166 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Angle&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Angle&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:18,167 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:18,168 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:22:18,169 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:22:18,222 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:22:18,223 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-15T09:22:18,223 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:18,224 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:18,224 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:18,225 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:18,226 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:18,226 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:18,227 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:18,228 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:22:18,229 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-15T09:22:18,229 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:18,230 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:18,230 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:18,231 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:18,232 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:18,233 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:18,233 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:18,457 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:22:18,458 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-15T09:22:18,459 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:18,459 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:22:18,460 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:18,461 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:18,462 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:18,462 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:22:18,463 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:22:18,463 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:22:18,464 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-15T09:22:18,465 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:18,466 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:22:18,466 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:18,467 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:18,468 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:18,468 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:22:18,469 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:22:18,555 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:22:18,556 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-15T09:22:18,556 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-15T09:22:18,557 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:18,557 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:18,558 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:18,559 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:18,560 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:22:18,560 1779 | _M_range_insert(__pos, __first, __last, 2023-09-15T09:22:18,561 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:18,561 1780 | std::__iterator_category(__first)); 2023-09-15T09:22:18,562 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:18,562 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:18,563 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:22:18,564 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-15T09:22:18,564 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-15T09:22:18,565 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:18,566 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:18,566 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:18,567 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:18,568 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:22:18,569 1779 | _M_range_insert(__pos, __first, __last, 2023-09-15T09:22:18,569 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:18,570 1780 | std::__iterator_category(__first)); 2023-09-15T09:22:18,571 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:18,571 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:18,658 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:22:18,658 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-15T09:22:18,659 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:18,660 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:18,661 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:18,661 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:18,662 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:18,663 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:22:18,663 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:22:18,664 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:22:18,665 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-15T09:22:18,665 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:18,666 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:18,667 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:18,668 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:18,669 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:18,670 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:22:18,670 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:22:20,098 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-15T09:22:20,099 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::iterable&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:180:24: 2023-09-15T09:22:20,100 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:20,101 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-15T09:22:20,101 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:20,584 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-15T09:22:20,585 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::iterable&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:180:24: 2023-09-15T09:22:20,585 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:20,586 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-15T09:22:20,587 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:21,097 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:22:21,098 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:22:21,099 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::iterable&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:177:32: 2023-09-15T09:22:21,099 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:21,100 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:22:21,101 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:21,102 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:22:21,102 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::iterable&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:180:24: 2023-09-15T09:22:21,103 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:21,104 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-15T09:22:21,104 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:21,341 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:22:21,341 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:22:21,342 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:156:25, 2023-09-15T09:22:21,342 inlined from ‘pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/init.h:303:33, 2023-09-15T09:22:21,343 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:21,344 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:21,345 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:21,345 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:21,346 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:21,347 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:22:21,348 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:21,348 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:22:21,349 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:22:21,350 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:156:25, 2023-09-15T09:22:21,351 inlined from ‘pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/init.h:303:33, 2023-09-15T09:22:21,351 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:21,352 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:21,353 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:21,354 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:21,355 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:21,355 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:22:21,356 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:21,760 In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >(const std::__cxx11::basic_string&, const std::__cxx11::basic_string&):: >]’, 2023-09-15T09:22:21,761 inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::Restraints::find_bond >(const std::__cxx11::basic_string&, const std::__cxx11::basic_string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:3877:28, 2023-09-15T09:22:21,761 inlined from ‘std::vector::iterator gemmi::Restraints::find_bond(const T&, const T&) [with T = std::__cxx11::basic_string]’ at include/gemmi/chemcomp.hpp:143:24, 2023-09-15T09:22:21,762 inlined from ‘add_chemcomp(pybind11::module&)::’ at python/chemcomp.cpp:137:37, 2023-09-15T09:22:21,763 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Bond&; Func = add_chemcomp(pybind11::module&)::&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:21,763 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Bond&; Guard = pybind11::detail::void_type; Func = add_chemcomp(pybind11::module&)::&; Args = {gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:22:21,764 inlined from ‘pybind11::cpp_function::initialize, gemmi::Restraints::Bond&, gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::return_value_policy>(add_chemcomp(pybind11::module&)::&&, gemmi::Restraints::Bond& (*)(gemmi::Restraints&, const std::__cxx11::basic_string&, const std::__cxx11::basic_string&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::return_value_policy&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:21,765 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, gemmi::Restraints::Bond&, gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::return_value_policy>(add_chemcomp(pybind11::module&)::&&, gemmi::Restraints::Bond& (*)(gemmi::Restraints&, const std::__cxx11::basic_string&, const std::__cxx11::basic_string&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::return_value_policy&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:21,765 /usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:21,766 2112 | return __find_if(__first, __last, __pred, 2023-09-15T09:22:21,766 | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:21,767 2113 | std::__iterator_category(__first)); 2023-09-15T09:22:21,767 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:21,768 In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >(const std::__cxx11::basic_string&, const std::__cxx11::basic_string&):: >]’, 2023-09-15T09:22:21,769 inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::Restraints::find_bond >(const std::__cxx11::basic_string&, const std::__cxx11::basic_string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:3877:28, 2023-09-15T09:22:21,770 inlined from ‘std::vector::iterator gemmi::Restraints::find_bond(const T&, const T&) [with T = std::__cxx11::basic_string]’ at include/gemmi/chemcomp.hpp:143:24, 2023-09-15T09:22:21,770 inlined from ‘add_chemcomp(pybind11::module&)::’ at python/chemcomp.cpp:137:37, 2023-09-15T09:22:21,771 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Bond&; Func = add_chemcomp(pybind11::module&)::&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:21,772 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Bond&; Guard = pybind11::detail::void_type; Func = add_chemcomp(pybind11::module&)::&; Args = {gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:22:21,772 inlined from ‘pybind11::cpp_function::initialize, gemmi::Restraints::Bond&, gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::return_value_policy>(add_chemcomp(pybind11::module&)::&&, gemmi::Restraints::Bond& (*)(gemmi::Restraints&, const std::__cxx11::basic_string&, const std::__cxx11::basic_string&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::return_value_policy&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:21,773 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, gemmi::Restraints::Bond&, gemmi::Restraints&, const std::__cxx11::basic_string, std::allocator >&, const std::__cxx11::basic_string, std::allocator >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::return_value_policy>(add_chemcomp(pybind11::module&)::&&, gemmi::Restraints::Bond& (*)(gemmi::Restraints&, const std::__cxx11::basic_string&, const std::__cxx11::basic_string&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::return_value_policy&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:21,774 /usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:21,774 2112 | return __find_if(__first, __last, __pred, 2023-09-15T09:22:21,775 | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:21,776 2113 | std::__iterator_category(__first)); 2023-09-15T09:22:21,776 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:23,920 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Plane&; Extra = {}]’, 2023-09-15T09:22:23,921 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:22:23,922 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:22:23,923 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:22:23,923 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-15T09:22:23,924 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:23,925 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:23,926 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:22:23,927 | ^ 2023-09-15T09:22:23,927 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Plane&; Extra = {}]’, 2023-09-15T09:22:23,928 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:22:23,929 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:22:23,930 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:22:23,930 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-15T09:22:23,931 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:23,932 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:23,933 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:22:23,933 | ^ 2023-09-15T09:22:23,983 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Bond&; Extra = {}]’, 2023-09-15T09:22:23,983 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:22:23,984 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:22:23,985 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:22:23,986 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-15T09:22:23,986 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:23,987 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:23,988 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:22:23,988 | ^ 2023-09-15T09:22:23,989 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Bond&; Extra = {}]’, 2023-09-15T09:22:23,990 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:22:23,990 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:22:23,991 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:22:23,992 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-15T09:22:23,993 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:23,994 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:23,994 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:22:23,995 | ^ 2023-09-15T09:22:24,015 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Angle&; Extra = {}]’, 2023-09-15T09:22:24,016 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:22:24,017 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:22:24,018 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:22:24,018 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-15T09:22:24,019 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:24,020 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:24,020 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:22:24,021 | ^ 2023-09-15T09:22:24,022 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Angle&; Extra = {}]’, 2023-09-15T09:22:24,022 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:22:24,023 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:22:24,024 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:22:24,024 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-15T09:22:24,025 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:24,026 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:24,027 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:22:24,027 | ^ 2023-09-15T09:22:24,078 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Torsion&; Extra = {}]’, 2023-09-15T09:22:24,078 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:22:24,079 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:22:24,080 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:22:24,080 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-15T09:22:24,081 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:24,082 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:24,083 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:22:24,084 | ^ 2023-09-15T09:22:24,084 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Restraints::Torsion&; Extra = {}]’, 2023-09-15T09:22:24,085 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:22:24,086 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:22:24,086 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:22:24,087 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-15T09:22:24,088 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:24,088 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:24,089 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:22:24,090 | ^ 2023-09-15T09:22:25,394 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-15T09:22:25,394 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-15T09:22:25,395 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Plane; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:22:25,396 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Plane; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:22:25,396 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Plane, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Plane (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-15T09:22:25,397 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Plane, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Plane (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:25,398 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:25,399 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:25,400 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:25,400 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-15T09:22:25,401 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-15T09:22:25,401 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Plane; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:22:25,402 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Plane; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:22:25,402 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Plane, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Plane (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-15T09:22:25,403 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Plane, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Plane (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:25,404 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:25,404 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:25,405 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:25,668 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-15T09:22:25,669 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-15T09:22:25,670 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Torsion; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:22:25,670 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Torsion; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:22:25,671 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Torsion, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Torsion (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17: 2023-09-15T09:22:25,672 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:25,672 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:25,673 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:25,674 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-15T09:22:25,674 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-15T09:22:25,675 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Torsion; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:22:25,675 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Torsion; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:22:25,676 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Torsion, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Torsion (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40: 2023-09-15T09:22:25,677 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:25,678 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:25,678 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:25,856 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-15T09:22:25,857 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-15T09:22:25,857 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Angle; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:22:25,858 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Angle; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:22:25,859 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Angle, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Angle (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-15T09:22:25,859 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Angle, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Angle (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:25,860 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:25,861 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:25,861 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:25,862 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-15T09:22:25,863 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-15T09:22:25,864 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Angle; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:22:25,864 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Angle; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:22:25,865 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Angle, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Angle (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-15T09:22:25,866 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Angle, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Angle (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:25,867 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:25,867 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:25,868 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:26,032 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:22:26,033 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-15T09:22:26,033 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Bond; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:22:26,034 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Bond; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:22:26,035 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Bond, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Bond (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-15T09:22:26,036 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Bond, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Bond (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:26,037 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:26,037 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:26,038 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:26,038 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:22:26,039 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-15T09:22:26,040 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Restraints::Bond; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:22:26,041 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Restraints::Bond; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:22:26,041 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Bond, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Bond (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-15T09:22:26,042 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Restraints::Bond, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Restraints::Bond (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:26,043 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:26,044 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:26,044 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:26,427 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:22:26,428 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-15T09:22:26,428 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:26,429 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:26,430 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:26,430 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:26,431 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:26,432 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:26,432 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:26,433 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:22:26,434 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-15T09:22:26,434 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:26,435 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:26,436 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:26,437 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:26,438 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:26,438 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:26,439 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:26,499 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-15T09:22:26,500 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-15T09:22:26,501 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:26,501 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:26,502 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:26,503 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:26,504 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:26,505 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:26,505 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:26,506 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-15T09:22:26,507 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-15T09:22:26,508 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:26,508 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:26,509 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:26,510 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:26,510 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:26,511 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:26,512 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:26,569 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-15T09:22:26,570 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-15T09:22:26,570 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:26,571 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:26,572 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:26,573 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:26,573 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:26,574 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:26,575 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:26,575 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-15T09:22:26,576 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-15T09:22:26,577 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:26,577 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:26,578 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:26,579 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:26,580 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:26,580 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:26,581 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:26,712 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-15T09:22:26,713 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-15T09:22:26,714 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:26,714 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:26,715 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:26,716 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:26,716 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:26,717 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:26,718 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:26,718 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-15T09:22:26,719 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-15T09:22:26,719 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:26,720 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:26,721 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:26,721 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:26,722 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:26,723 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:22:26,723 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:26,859 In file included from python/chemcomp.cpp:8: 2023-09-15T09:22:26,860 In lambda function, 2023-09-15T09:22:26,861 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Restraints::Torsion&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:26,861 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Restraints::Torsion&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:26,862 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Torsion&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Torsion&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:26,862 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Torsion&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Torsion&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:26,864 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:22:26,864 203 | v.insert(v.begin() + i, x); 2023-09-15T09:22:26,865 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:26,866 In lambda function, 2023-09-15T09:22:26,866 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Restraints::Torsion&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:26,867 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Restraints::Torsion&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:26,867 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Torsion&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Torsion&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:26,868 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Torsion&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Torsion&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:26,869 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:22:26,870 203 | v.insert(v.begin() + i, x); 2023-09-15T09:22:26,870 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:26,947 In lambda function, 2023-09-15T09:22:26,948 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:26,949 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:26,949 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:26,950 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:26,951 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:22:26,952 203 | v.insert(v.begin() + i, x); 2023-09-15T09:22:26,952 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:26,953 In lambda function, 2023-09-15T09:22:26,953 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:26,954 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Restraints::Bond&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:26,954 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:26,955 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Bond&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Bond&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:26,956 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:22:26,957 203 | v.insert(v.begin() + i, x); 2023-09-15T09:22:26,958 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:27,120 In lambda function, 2023-09-15T09:22:27,120 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Restraints::Angle&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:27,121 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Restraints::Angle&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:27,122 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Angle&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Angle&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:27,123 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Angle&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Angle&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:27,123 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:22:27,124 203 | v.insert(v.begin() + i, x); 2023-09-15T09:22:27,125 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:27,125 In lambda function, 2023-09-15T09:22:27,126 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Restraints::Angle&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:27,126 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Restraints::Angle&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:27,127 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Angle&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Angle&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:27,128 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Angle&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Angle&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:27,128 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:22:27,129 203 | v.insert(v.begin() + i, x); 2023-09-15T09:22:27,130 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:28,756 In file included from /usr/include/c++/12/vector:63: 2023-09-15T09:22:28,756 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’: 2023-09-15T09:22:28,757 /usr/include/c++/12/bits/stl_uninitialized.h:163:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:28,758 163 | uninitialized_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:22:28,758 | ^~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:28,759 /usr/include/c++/12/bits/stl_uninitialized.h:163:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:29,417 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-15T09:22:29,418 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:22:29,418 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::iterable&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:177:32: 2023-09-15T09:22:29,419 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:29,420 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:22:29,420 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:29,727 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’: 2023-09-15T09:22:29,728 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:22:29,729 739 | vector<_Tp, _Alloc>:: 2023-09-15T09:22:29,729 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:29,730 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:29,731 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:29,731 In function ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; _Tp = gemmi::Restraints::Plane]’, 2023-09-15T09:22:29,732 inlined from ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:769:34: 2023-09-15T09:22:29,733 /usr/include/c++/12/bits/stl_uninitialized.h:372:37: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:29,733 372 | return std::uninitialized_copy(__first, __last, __result); 2023-09-15T09:22:29,734 | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:29,855 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-15T09:22:29,856 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-15T09:22:29,856 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-15T09:22:29,857 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:29,858 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:29,858 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:29,859 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:29,860 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:22:29,861 1779 | _M_range_insert(__pos, __first, __last, 2023-09-15T09:22:29,861 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:29,862 1780 | std::__iterator_category(__first)); 2023-09-15T09:22:29,862 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:29,863 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:29,864 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-15T09:22:29,864 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-15T09:22:29,865 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-15T09:22:29,866 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:29,866 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:29,867 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:29,868 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:29,868 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:22:29,869 1779 | _M_range_insert(__pos, __first, __last, 2023-09-15T09:22:29,870 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:29,870 1780 | std::__iterator_category(__first)); 2023-09-15T09:22:29,871 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:29,871 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:30,339 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Plane&}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’: 2023-09-15T09:22:30,340 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:22:30,341 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:22:30,342 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:30,461 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-15T09:22:30,462 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-15T09:22:30,463 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:30,463 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:22:30,464 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:30,465 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:30,466 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:30,466 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:22:30,467 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:22:30,467 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-15T09:22:30,468 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-15T09:22:30,469 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:30,469 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:22:30,470 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:30,471 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:30,471 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:30,472 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:22:30,473 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:22:30,569 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-15T09:22:30,569 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-15T09:22:30,570 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Restraints::Plane&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:30,570 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Restraints::Plane&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:30,571 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Plane&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Plane&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:30,572 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Plane&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Plane&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:30,572 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:30,573 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:22:30,574 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:22:30,574 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-15T09:22:30,575 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-15T09:22:30,576 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Restraints::Plane&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:30,576 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Restraints::Plane&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:30,577 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Plane&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Plane&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:30,578 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Restraints::Plane&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Restraints::Plane&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:30,578 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:30,579 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:22:30,580 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:22:30,657 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’: 2023-09-15T09:22:30,658 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:22:30,658 133 | vector<_Tp, _Alloc>:: 2023-09-15T09:22:30,659 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:30,659 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:22:30,660 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-15T09:22:30,660 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:30,745 In lambda function, 2023-09-15T09:22:30,745 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Restraints::Plane&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:30,746 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Restraints::Plane&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:30,747 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Plane&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Plane&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:22:30,747 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Plane&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Plane&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:30,748 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:22:30,749 203 | v.insert(v.begin() + i, x); 2023-09-15T09:22:30,750 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:30,750 In lambda function, 2023-09-15T09:22:30,751 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Restraints::Plane&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:22:30,751 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Restraints::Plane&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:22:30,752 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Plane&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Plane&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:22:30,753 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Restraints::Plane&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Restraints::Plane&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:22:30,753 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:22:30,754 203 | v.insert(v.begin() + i, x); 2023-09-15T09:22:30,755 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-15T09:22:31,696 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/cif.cpp -o build/temp.linux-armv7l-cpython-311/python/cif.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:23:30,122 In file included from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../attr.h:14, 2023-09-15T09:23:30,122 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/class.h:12, 2023-09-15T09:23:30,123 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:13, 2023-09-15T09:23:30,124 from python/common.h:3, 2023-09-15T09:23:30,124 from python/cif.cpp:9: 2023-09-15T09:23:30,125 In static member function ‘static pybind11::handle pybind11::detail::array_caster::cast(T_*, pybind11::return_value_policy, pybind11::handle) [with T_ = std::array, 2>; typename std::enable_if::type>::value, int>::type = 0; ArrayType = std::array, 2>; Value = std::__cxx11::basic_string; bool Resizable = false; unsigned int Size = 2]’, 2023-09-15T09:23:30,125 inlined from ‘pybind11::cpp_function::initialize&, std::array, 2>*, gemmi::cif::Item&>(const add_cif(pybind11::module&)::&, std::array, 2>* (*)(gemmi::cif::Item&))::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-15T09:23:30,126 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize&, std::array, 2>*, gemmi::cif::Item&>(const add_cif(pybind11::module&)::&, std::array, 2>* (*)(gemmi::cif::Item&))::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:23:30,126 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:102:13: warning: ‘void operator delete(void*, std::size_t)’ called on pointer ‘’ with nonzero offset 8 [-Wfree-nonheap-object] 2023-09-15T09:23:30,127 102 | delete src; \ 2023-09-15T09:23:30,128 | ^~~~~~~~~~ 2023-09-15T09:23:30,128 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl.h:275:5: note: in expansion of macro ‘PYBIND11_TYPE_CASTER’ 2023-09-15T09:23:30,129 275 | PYBIND11_TYPE_CASTER(ArrayType, 2023-09-15T09:23:30,130 | ^~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:23:30,130 In function ‘typename pybind11::detail::make_caster::cast_op_type::type> pybind11::detail::cast_op(make_caster&&) [with T = gemmi::cif::Item&]’, 2023-09-15T09:23:30,131 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::array, 2>*; Func = const add_cif(pybind11::module&)::&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {gemmi::cif::Item&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:51, 2023-09-15T09:23:30,132 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::array, 2>*; Guard = pybind11::detail::void_type; Func = const add_cif(pybind11::module&)::&; Args = {gemmi::cif::Item&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:23:30,133 inlined from ‘pybind11::cpp_function::initialize&, std::array, 2>*, gemmi::cif::Item&>(const add_cif(pybind11::module&)::&, std::array, 2>* (*)(gemmi::cif::Item&))::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-15T09:23:30,133 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize&, std::array, 2>*, gemmi::cif::Item&>(const add_cif(pybind11::module&)::&, std::array, 2>* (*)(gemmi::cif::Item&))::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:23:30,134 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:51:75: note: returned from ‘pybind11::detail::type_caster_base::operator itype&() [with type = gemmi::cif::Item]’ 2023-09-15T09:23:30,134 50 | return std::move(caster).operator typename make_caster:: 2023-09-15T09:23:30,135 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:23:30,136 51 | template cast_op_type::type>(); 2023-09-15T09:23:30,136 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 2023-09-15T09:23:37,477 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/custom.cpp -o build/temp.linux-armv7l-cpython-311/python/custom.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:23:44,074 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/elem.cpp -o build/temp.linux-armv7l-cpython-311/python/elem.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:24:22,192 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/gemmi.cpp -o build/temp.linux-armv7l-cpython-311/python/gemmi.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:24:50,707 In file included from /usr/include/c++/12/vector:70, 2023-09-15T09:24:50,708 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/common.h:314, 2023-09-15T09:24:50,708 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../attr.h:13, 2023-09-15T09:24:50,709 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/class.h:12, 2023-09-15T09:24:50,710 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:13, 2023-09-15T09:24:50,710 from python/common.h:3, 2023-09-15T09:24:50,711 from python/gemmi.cpp:3: 2023-09-15T09:24:50,711 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-15T09:24:50,712 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:24:50,712 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:24:50,713 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:24:54,334 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-15T09:24:54,334 inlined from ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const gemmi::SpaceGroup*)’ at include/gemmi/unitcell.hpp:317:26: 2023-09-15T09:24:54,335 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:24:54,335 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:24:54,336 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:25:00,765 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::SmallStructure::Site&}; _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator]’: 2023-09-15T09:25:00,765 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:25:00,766 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:25:00,766 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:25:00,959 In file included from /usr/include/c++/12/vector:64: 2023-09-15T09:25:00,959 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator]’, 2023-09-15T09:25:00,960 inlined from ‘std::vector gemmi::SmallStructure::get_all_unit_cell_sites() const’ at include/gemmi/small.hpp:114:18: 2023-09-15T09:25:00,961 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:25:00,961 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:25:00,962 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:25:00,964 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator]’, 2023-09-15T09:25:00,965 inlined from ‘std::vector gemmi::SmallStructure::get_all_unit_cell_sites() const’ at include/gemmi/small.hpp:121:20: 2023-09-15T09:25:00,965 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:25:00,966 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:25:00,967 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:25:03,782 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator]’, 2023-09-15T09:25:03,782 inlined from ‘add_misc(pybind11::module&)::’ at python/gemmi.cpp:54:29, 2023-09-15T09:25:03,783 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = add_misc(pybind11::module&)::&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {gemmi::SmallStructure&, const gemmi::SmallStructure::Site&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:25:03,783 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = add_misc(pybind11::module&)::&; Args = {gemmi::SmallStructure&, const gemmi::SmallStructure::Site&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:25:03,784 inlined from ‘pybind11::cpp_function::initialize, void, gemmi::SmallStructure&, const gemmi::SmallStructure::Site&, pybind11::name, pybind11::is_method, pybind11::sibling>(add_misc(pybind11::module&)::&&, void (*)(gemmi::SmallStructure&, const gemmi::SmallStructure::Site&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:25:03,785 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, void, gemmi::SmallStructure&, const gemmi::SmallStructure::Site&, pybind11::name, pybind11::is_method, pybind11::sibling>(add_misc(pybind11::module&)::&&, void (*)(gemmi::SmallStructure&, const gemmi::SmallStructure::Site&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:25:03,785 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:25:03,786 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:25:03,787 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:25:03,787 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator]’, 2023-09-15T09:25:03,788 inlined from ‘add_misc(pybind11::module&)::’ at python/gemmi.cpp:54:29, 2023-09-15T09:25:03,789 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = add_misc(pybind11::module&)::&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {gemmi::SmallStructure&, const gemmi::SmallStructure::Site&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:25:03,789 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = add_misc(pybind11::module&)::&; Args = {gemmi::SmallStructure&, const gemmi::SmallStructure::Site&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:25:03,790 inlined from ‘pybind11::cpp_function::initialize, void, gemmi::SmallStructure&, const gemmi::SmallStructure::Site&, pybind11::name, pybind11::is_method, pybind11::sibling>(add_misc(pybind11::module&)::&&, void (*)(gemmi::SmallStructure&, const gemmi::SmallStructure::Site&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:25:03,790 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, void, gemmi::SmallStructure&, const gemmi::SmallStructure::Site&, pybind11::name, pybind11::is_method, pybind11::sibling>(add_misc(pybind11::module&)::&&, void (*)(gemmi::SmallStructure&, const gemmi::SmallStructure::Site&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:25:03,791 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:25:03,792 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:25:03,792 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:25:07,547 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/grid.cpp -o build/temp.linux-armv7l-cpython-311/python/grid.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:25:49,017 In file included from /usr/include/c++/12/vector:70, 2023-09-15T09:25:49,017 from include/gemmi/grid.hpp:15, 2023-09-15T09:25:49,018 from python/grid.cpp:13: 2023-09-15T09:25:49,018 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Blob&}; _Tp = gemmi::Blob; _Alloc = std::allocator]’: 2023-09-15T09:25:49,019 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:25:49,020 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:25:49,020 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:25:56,860 In file included from /usr/include/c++/12/vector:64: 2023-09-15T09:25:56,860 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Blob; _Alloc = std::allocator]’, 2023-09-15T09:25:56,861 inlined from ‘std::vector gemmi::find_blobs_by_flood_fill(const Grid&, const BlobCriteria&)’ at include/gemmi/blob.hpp:121:26: 2023-09-15T09:25:56,861 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:25:56,862 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:25:56,862 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:26:25,409 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Fractional&}; _Tp = gemmi::Fractional; _Alloc = std::allocator]’: 2023-09-15T09:26:25,410 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:26:25,410 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:26:25,411 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:26:25,474 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Fractional; _Alloc = std::allocator]’, 2023-09-15T09:26:25,475 inlined from ‘bool pybind11::detail::list_caster::load(pybind11::handle, bool) [with Type = std::vector; Value = gemmi::Fractional]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl.h:180:28: 2023-09-15T09:26:25,475 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:26:25,476 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:26:25,477 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:26:26,325 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/hkl.cpp -o build/temp.linux-armv7l-cpython-311/python/hkl.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:26:34,442 python/hkl.cpp: In lambda function: 2023-09-15T09:26:34,442 python/hkl.cpp:141:18: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 2023-09-15T09:26:34,443 141 | return r; 2023-09-15T09:26:34,444 | ^ 2023-09-15T09:27:07,309 In file included from /usr/include/c++/12/vector:70, 2023-09-15T09:27:07,310 from include/gemmi/unitcell.hpp:10, 2023-09-15T09:27:07,311 from python/hkl.cpp:3: 2023-09-15T09:27:07,311 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-15T09:27:07,312 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:27:07,313 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:27:07,314 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:27:07,418 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-15T09:27:07,419 inlined from ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const gemmi::SpaceGroup*)’ at include/gemmi/unitcell.hpp:317:26: 2023-09-15T09:27:07,419 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:27:07,420 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:27:07,421 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:27:09,128 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Mtz::Dataset}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-15T09:27:09,129 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:27:09,129 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:27:09,130 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:27:09,298 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mtz::Dataset}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-15T09:27:09,299 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:27:09,299 inlined from ‘gemmi::Mtz::Dataset& gemmi::Mtz::add_dataset(const std::string&)’ at include/gemmi/mtz.hpp:893:23: 2023-09-15T09:27:09,300 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:27:09,301 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:27:09,301 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:27:25,312 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::cif::Block}; _Tp = gemmi::ReflnBlock; _Alloc = std::allocator]’: 2023-09-15T09:27:25,312 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:27:25,313 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:27:25,314 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:27:25,612 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::cif::Block}; _Tp = gemmi::ReflnBlock; _Alloc = std::allocator]’, 2023-09-15T09:27:25,612 inlined from ‘std::vector gemmi::as_refln_blocks(std::vector&&)’ at include/gemmi/refln.hpp:147:19: 2023-09-15T09:27:25,613 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:27:25,613 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:27:25,614 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:27:25,899 In file included from /usr/include/c++/12/algorithm:61, 2023-09-15T09:27:25,900 from include/gemmi/math.hpp:10, 2023-09-15T09:27:25,901 from include/gemmi/unitcell.hpp:11: 2023-09-15T09:27:25,901 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2023-09-15T09:27:25,902 inlined from ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1844:5, 2023-09-15T09:27:25,902 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2023-09-15T09:27:25,903 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1932:5, 2023-09-15T09:27:25,903 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = gemmi::impl_fprim::Point*]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2023-09-15T09:27:25,904 inlined from ‘void gemmi::impl_fprim::cromer(int, double, int, const OrbitalCoef*, double*, double*)’ at include/gemmi/fprime.hpp:161:14: 2023-09-15T09:27:25,904 /usr/include/c++/12/bits/stl_algo.h:1849:32: warning: array subscript 16 is outside array bounds of ‘gemmi::impl_fprim::Point [11]’ [-Warray-bounds] 2023-09-15T09:27:25,904 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2023-09-15T09:27:25,905 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:27:25,906 In file included from python/hkl.cpp:7: 2023-09-15T09:27:25,906 include/gemmi/fprime.hpp: In function ‘void gemmi::impl_fprim::cromer(int, double, int, const OrbitalCoef*, double*, double*)’: 2023-09-15T09:27:25,907 include/gemmi/fprime.hpp:153:11: note: at offset 256 into object ‘lndata’ of size 176 2023-09-15T09:27:25,907 153 | Point lndata[11]; 2023-09-15T09:27:25,908 | ^~~~~~ 2023-09-15T09:27:27,826 In file included from python/common.h:3, 2023-09-15T09:27:27,827 from python/hkl.cpp:11: 2023-09-15T09:27:27,828 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::ReflnBlock&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::ReflnBlock&; Extra = {}]’: 2023-09-15T09:27:27,828 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:27:27,829 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-15T09:27:27,829 | ^~~~~~~~~~~~~~~~~~ 2023-09-15T09:27:27,830 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:27:32,296 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::ReflnBlock&; Extra = {}]’, 2023-09-15T09:27:32,296 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:27:32,297 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:27:32,298 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:27:32,298 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-15T09:27:32,299 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:27:32,300 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:27:32,301 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:27:32,301 | ^ 2023-09-15T09:27:32,302 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::ReflnBlock&; Extra = {}]’, 2023-09-15T09:27:32,302 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:27:32,303 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:27:32,304 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:27:32,304 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-15T09:27:32,305 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:27:32,306 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:27:32,307 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:27:32,307 | ^ 2023-09-15T09:27:39,108 In file included from include/gemmi/fourier.hpp:19, 2023-09-15T09:27:39,109 from python/hkl.cpp:5: 2023-09-15T09:27:39,110 In member function ‘pocketfft::detail::cmplx*)this)->pocketfft::detail::cmplx::r * other))> pocketfft::detail::cmplx::operator*(const T2&) const [with T2 = float; T = float]’, 2023-09-15T09:27:39,110 inlined from ‘void pocketfft::detail::fftblue::fft(pocketfft::detail::cmplx*, T0) const [with bool fwd = true; T = float; T0 = float]’ at include/gemmi/third_party/pocketfft_hdronly.h:2260:25: 2023-09-15T09:27:39,111 include/gemmi/third_party/pocketfft_hdronly.h:236:15: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::r’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-15T09:27:39,112 236 | { return {r*other, i*other}; } 2023-09-15T09:27:39,112 | ^ 2023-09-15T09:27:39,113 include/gemmi/third_party/pocketfft_hdronly.h:236:24: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::i’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-15T09:27:39,113 236 | { return {r*other, i*other}; } 2023-09-15T09:27:39,114 | ^ 2023-09-15T09:27:39,190 In member function ‘pocketfft::detail::cmplx*)this)->pocketfft::detail::cmplx::r * other))> pocketfft::detail::cmplx::operator*(const T2&) const [with T2 = float; T = float]’, 2023-09-15T09:27:39,191 inlined from ‘void pocketfft::detail::fftblue::fft(pocketfft::detail::cmplx*, T0) const [with bool fwd = false; T = float; T0 = float]’ at include/gemmi/third_party/pocketfft_hdronly.h:2260:25: 2023-09-15T09:27:39,191 include/gemmi/third_party/pocketfft_hdronly.h:236:15: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::r’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-15T09:27:39,192 236 | { return {r*other, i*other}; } 2023-09-15T09:27:39,192 | ^ 2023-09-15T09:27:39,193 include/gemmi/third_party/pocketfft_hdronly.h:236:24: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::i’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-15T09:27:39,193 236 | { return {r*other, i*other}; } 2023-09-15T09:27:39,194 | ^ 2023-09-15T09:27:42,484 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/meta.cpp -o build/temp.linux-armv7l-cpython-311/python/meta.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:28:33,955 In file included from /usr/include/c++/12/vector:70, 2023-09-15T09:28:33,955 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/common.h:314, 2023-09-15T09:28:33,956 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../attr.h:13, 2023-09-15T09:28:33,957 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/class.h:12, 2023-09-15T09:28:33,957 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:13, 2023-09-15T09:28:33,958 from python/common.h:3, 2023-09-15T09:28:33,958 from python/meta.cpp:3: 2023-09-15T09:28:33,959 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’: 2023-09-15T09:28:33,960 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:28:33,960 739 | vector<_Tp, _Alloc>:: 2023-09-15T09:28:33,961 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:28:33,961 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:28:33,962 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:28:52,902 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::NcsOp&}; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’: 2023-09-15T09:28:52,903 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:28:52,903 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:28:52,904 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:28:52,975 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’: 2023-09-15T09:28:52,976 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:28:52,976 133 | vector<_Tp, _Alloc>:: 2023-09-15T09:28:52,977 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:28:52,979 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:28:52,979 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-15T09:28:52,980 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:28:53,041 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’: 2023-09-15T09:28:53,042 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:28:53,042 175 | vector<_Tp, _Alloc>:: 2023-09-15T09:28:53,043 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:28:53,450 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-15T09:28:53,451 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:28:53,452 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:28:53,452 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:28:53,647 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-15T09:28:53,648 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:28:53,649 133 | vector<_Tp, _Alloc>:: 2023-09-15T09:28:53,649 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:28:53,651 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:28:53,651 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-15T09:28:53,652 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:28:53,809 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-15T09:28:53,810 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:28:53,811 739 | vector<_Tp, _Alloc>:: 2023-09-15T09:28:53,812 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:28:53,812 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:28:53,812 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:28:53,959 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-15T09:28:53,959 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:28:53,960 175 | vector<_Tp, _Alloc>:: 2023-09-15T09:28:53,960 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:28:57,510 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-15T09:28:57,511 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:28:57,742 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’: 2023-09-15T09:28:57,742 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:29:08,343 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::NcsOp&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::NcsOp&; Extra = {}]’: 2023-09-15T09:29:08,343 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:08,344 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-15T09:29:08,344 | ^~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:08,345 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:08,680 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Connection}; _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-15T09:29:08,681 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:29:08,681 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:29:08,682 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:08,901 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Connection&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Connection&; Extra = {}]’: 2023-09-15T09:29:08,902 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:08,902 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-15T09:29:08,903 | ^~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:08,904 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:10,359 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Assembly::Operator}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-15T09:29:10,360 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:29:10,361 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:29:10,361 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:10,478 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Assembly::Operator&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Assembly::Operator&; Extra = {}]’: 2023-09-15T09:29:10,478 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:10,479 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-15T09:29:10,480 | ^~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:10,480 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:10,818 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Assembly&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Assembly&; Extra = {}]’: 2023-09-15T09:29:10,819 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:10,820 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:11,732 In file included from /usr/include/c++/12/vector:64: 2023-09-15T09:29:11,732 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-15T09:29:11,733 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-15T09:29:11,733 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:11,734 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:11,735 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:11,736 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:11,736 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:11,737 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:11,738 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:11,739 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-15T09:29:11,740 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-15T09:29:11,740 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:11,741 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:11,741 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:11,742 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:11,743 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:11,743 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:11,744 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:12,031 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-15T09:29:12,032 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-15T09:29:12,033 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:12,033 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:12,034 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:12,034 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:12,035 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:12,036 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:12,036 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:12,037 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-15T09:29:12,038 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-15T09:29:12,038 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:12,039 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:12,040 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:12,040 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:12,041 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:12,042 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:12,042 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:13,370 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-15T09:29:13,371 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-15T09:29:13,372 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:13,373 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:13,373 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:13,374 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:13,374 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:13,375 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:13,376 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:13,376 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-15T09:29:13,377 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-15T09:29:13,378 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:13,378 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:13,379 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:13,380 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:13,380 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:13,381 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:13,382 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:13,621 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-15T09:29:13,621 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-15T09:29:13,622 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:13,623 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:29:13,623 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:13,624 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:13,625 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:13,625 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:29:13,626 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:29:13,626 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-15T09:29:13,627 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-15T09:29:13,627 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:13,628 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:29:13,629 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:13,630 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:13,630 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:13,631 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:29:13,632 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:29:13,709 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-15T09:29:13,710 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-15T09:29:13,710 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-15T09:29:13,711 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:13,711 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:13,712 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:13,713 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:13,713 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:29:13,714 1779 | _M_range_insert(__pos, __first, __last, 2023-09-15T09:29:13,715 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:13,715 1780 | std::__iterator_category(__first)); 2023-09-15T09:29:13,715 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:13,716 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:13,716 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-15T09:29:13,717 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-15T09:29:13,717 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-15T09:29:13,718 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:13,718 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:13,719 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:13,720 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:13,721 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:29:13,722 1779 | _M_range_insert(__pos, __first, __last, 2023-09-15T09:29:13,722 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:13,723 1780 | std::__iterator_category(__first)); 2023-09-15T09:29:13,723 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:13,723 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:13,820 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-15T09:29:13,820 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-15T09:29:13,821 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Connection&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:13,822 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Connection&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:13,823 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:13,823 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:13,824 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:13,825 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:29:13,826 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:29:13,826 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-15T09:29:13,827 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-15T09:29:13,827 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Connection&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:13,828 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Connection&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:13,828 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:13,829 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:13,830 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:13,830 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:29:13,831 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:29:14,058 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-15T09:29:14,058 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-15T09:29:14,060 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:14,060 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:14,061 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:14,061 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:14,062 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:14,063 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:14,063 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:14,064 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-15T09:29:14,065 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-15T09:29:14,065 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:14,066 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:14,067 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:14,067 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:14,068 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:14,069 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:14,069 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:14,266 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-15T09:29:14,267 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-15T09:29:14,267 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:14,268 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:29:14,269 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:14,270 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:14,270 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:14,271 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:29:14,272 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:29:14,272 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-15T09:29:14,273 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-15T09:29:14,273 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:14,274 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:29:14,274 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:14,275 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:14,276 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:14,277 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:29:14,277 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:29:14,356 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-15T09:29:14,357 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-15T09:29:14,357 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-15T09:29:14,358 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:14,358 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:14,359 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:14,360 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:14,360 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:29:14,361 1779 | _M_range_insert(__pos, __first, __last, 2023-09-15T09:29:14,361 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:14,362 1780 | std::__iterator_category(__first)); 2023-09-15T09:29:14,362 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:14,363 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:14,364 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-15T09:29:14,364 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-15T09:29:14,365 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-15T09:29:14,365 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:14,366 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:14,366 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:14,367 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:14,368 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:29:14,368 1779 | _M_range_insert(__pos, __first, __last, 2023-09-15T09:29:14,369 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:14,370 1780 | std::__iterator_category(__first)); 2023-09-15T09:29:14,370 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:14,371 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:14,472 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-15T09:29:14,473 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-15T09:29:14,473 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:14,474 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:14,475 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:14,475 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:14,476 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:14,477 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:29:14,477 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:29:14,478 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-15T09:29:14,478 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-15T09:29:14,479 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:14,479 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:14,480 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:14,481 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:14,482 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:14,482 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:29:14,483 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:29:15,056 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Assembly::Operator}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-15T09:29:15,057 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:29:15,057 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:156:25, 2023-09-15T09:29:15,058 inlined from ‘pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/init.h:303:33, 2023-09-15T09:29:15,058 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:15,059 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:15,060 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:15,061 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:15,062 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:15,062 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:29:15,063 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:15,064 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Assembly::Operator}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-15T09:29:15,064 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:29:15,065 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:156:25, 2023-09-15T09:29:15,066 inlined from ‘pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/init.h:303:33, 2023-09-15T09:29:15,066 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:15,067 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&; Args = {pybind11::detail::value_and_holder&, const pybind11::iterable&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:15,068 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:15,069 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::, void, pybind11::detail::value_and_holder&, const pybind11::iterable&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::detail::is_new_style_constructor>(pybind11::detail::initimpl::factory, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::, pybind11::detail::void_type (*)(), std::vector*(const pybind11::iterable&), pybind11::detail::void_type()>::execute, std::unique_ptr >, std::default_delete > > > > >(pybind11::class_, std::unique_ptr >, std::default_delete > > > >&) &&::&&, void (*)(pybind11::detail::value_and_holder&, const pybind11::iterable&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::detail::is_new_style_constructor&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:15,069 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:15,070 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:29:15,070 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:17,461 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Connection}; _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-15T09:29:17,462 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:29:17,462 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::iterable&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:177:32: 2023-09-15T09:29:17,463 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:17,463 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:29:17,464 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:17,893 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Connection}; _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-15T09:29:17,894 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:29:17,895 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:156:25: 2023-09-15T09:29:17,895 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:17,896 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:29:17,896 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:22,400 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Assembly&; Extra = {}]’, 2023-09-15T09:29:22,400 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:29:22,401 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:29:22,401 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:29:22,402 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-15T09:29:22,403 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:22,403 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:22,404 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:29:22,405 | ^ 2023-09-15T09:29:22,405 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Assembly&; Extra = {}]’, 2023-09-15T09:29:22,406 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:29:22,407 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:29:22,407 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:29:22,408 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-15T09:29:22,408 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:22,409 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:22,409 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:29:22,410 | ^ 2023-09-15T09:29:22,474 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::NcsOp&; Extra = {}]’, 2023-09-15T09:29:22,475 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:29:22,476 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:29:22,476 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:29:22,477 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-15T09:29:22,477 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:22,478 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:22,479 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:29:22,479 | ^ 2023-09-15T09:29:22,480 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::NcsOp&; Extra = {}]’, 2023-09-15T09:29:22,480 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:29:22,481 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:29:22,481 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:29:22,482 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-15T09:29:22,483 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:22,483 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:22,484 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:29:22,484 | ^ 2023-09-15T09:29:22,549 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Connection&; Extra = {}]’, 2023-09-15T09:29:22,550 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:29:22,550 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:29:22,551 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:29:22,552 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-15T09:29:22,552 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:22,553 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:22,553 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:29:22,554 | ^ 2023-09-15T09:29:22,555 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Connection&; Extra = {}]’, 2023-09-15T09:29:22,555 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:29:22,556 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:29:22,556 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:29:22,557 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-15T09:29:22,557 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:22,558 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:22,559 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:29:22,559 | ^ 2023-09-15T09:29:22,657 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Assembly::Operator&; Extra = {}]’, 2023-09-15T09:29:22,658 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:29:22,658 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:29:22,659 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:29:22,660 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-15T09:29:22,660 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:22,661 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:22,662 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:29:22,662 | ^ 2023-09-15T09:29:22,663 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Assembly::Operator&; Extra = {}]’, 2023-09-15T09:29:22,664 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:29:22,664 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:29:22,665 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:29:22,665 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-15T09:29:22,666 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:22,667 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:22,667 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:29:22,668 | ^ 2023-09-15T09:29:23,668 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-15T09:29:23,668 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-15T09:29:23,669 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Assembly; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:29:23,669 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Assembly; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:29:23,670 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Assembly, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Assembly (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17: 2023-09-15T09:29:23,670 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:23,671 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:23,671 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:23,672 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-15T09:29:23,672 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-15T09:29:23,673 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Assembly; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:29:23,674 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Assembly; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:29:23,674 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Assembly, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Assembly (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40: 2023-09-15T09:29:23,675 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:23,676 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:23,676 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:23,864 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-15T09:29:23,864 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-15T09:29:23,865 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Assembly::Operator; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:29:23,866 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Assembly::Operator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:29:23,867 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Assembly::Operator, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Assembly::Operator (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17: 2023-09-15T09:29:23,867 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:23,868 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:23,869 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:23,869 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-15T09:29:23,870 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-15T09:29:23,870 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Assembly::Operator; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:29:23,871 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Assembly::Operator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:29:23,871 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Assembly::Operator, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Assembly::Operator (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40: 2023-09-15T09:29:23,872 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:23,873 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:23,874 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:24,505 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-15T09:29:24,505 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-15T09:29:24,506 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Connection; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:29:24,507 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Connection; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:29:24,507 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Connection, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Connection (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17: 2023-09-15T09:29:24,508 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:24,509 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:24,509 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:24,510 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-15T09:29:24,510 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-15T09:29:24,511 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Connection; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:29:24,512 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Connection; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:29:24,513 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Connection, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Connection (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40: 2023-09-15T09:29:24,514 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:24,514 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:24,515 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:24,789 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-15T09:29:24,790 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-15T09:29:24,791 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::NcsOp; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:29:24,791 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::NcsOp; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:29:24,792 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::NcsOp, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::NcsOp (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17: 2023-09-15T09:29:24,793 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:24,793 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:24,794 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:24,794 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-15T09:29:24,795 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-15T09:29:24,796 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::NcsOp; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:29:24,797 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::NcsOp; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:29:24,797 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::NcsOp, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::NcsOp (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40: 2023-09-15T09:29:24,798 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:24,799 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:24,799 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:25,255 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-15T09:29:25,255 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-15T09:29:25,256 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:25,257 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:25,258 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:25,258 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:25,259 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:25,260 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:25,260 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:25,261 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’, 2023-09-15T09:29:25,262 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-15T09:29:25,262 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:25,263 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:25,263 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:25,264 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:25,265 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:25,265 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:25,266 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:25,329 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-15T09:29:25,330 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-15T09:29:25,331 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:25,331 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:25,332 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:25,333 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:25,333 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:25,334 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:25,335 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:25,335 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-15T09:29:25,336 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-15T09:29:25,337 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:25,337 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:25,338 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:25,339 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:25,340 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:25,340 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:25,341 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:25,472 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-15T09:29:25,473 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-15T09:29:25,473 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:25,474 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:25,475 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:25,475 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:25,476 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:25,477 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:25,478 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:25,478 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-15T09:29:25,479 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-15T09:29:25,479 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:25,480 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:25,481 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:25,481 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:25,482 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:25,483 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:25,483 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:25,550 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-15T09:29:25,551 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-15T09:29:25,552 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:25,552 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:25,553 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:25,554 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:25,554 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:25,555 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:25,556 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:25,557 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-15T09:29:25,557 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-15T09:29:25,558 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:25,558 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:25,559 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:25,560 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:25,560 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:25,561 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:29:25,561 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:26,059 In file included from python/meta.cpp:5: 2023-09-15T09:29:26,060 In lambda function, 2023-09-15T09:29:26,060 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:26,061 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:26,061 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:26,062 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:26,063 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:29:26,063 203 | v.insert(v.begin() + i, x); 2023-09-15T09:29:26,064 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:26,064 In lambda function, 2023-09-15T09:29:26,065 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:26,065 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::NcsOp&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:26,066 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:26,066 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::NcsOp&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::NcsOp&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:26,067 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:29:26,068 203 | v.insert(v.begin() + i, x); 2023-09-15T09:29:26,068 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:26,144 In lambda function, 2023-09-15T09:29:26,145 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Connection&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:26,145 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Connection&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:26,146 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:26,147 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:26,148 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:29:26,148 203 | v.insert(v.begin() + i, x); 2023-09-15T09:29:26,149 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:26,150 In lambda function, 2023-09-15T09:29:26,150 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Connection&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:26,151 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Connection&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:26,152 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:26,153 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Connection&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Connection&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:26,153 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:29:26,154 203 | v.insert(v.begin() + i, x); 2023-09-15T09:29:26,155 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:27,890 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Assembly::Operator&}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-15T09:29:27,891 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:29:27,892 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:29:27,892 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:27,987 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-15T09:29:27,987 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:29:27,988 133 | vector<_Tp, _Alloc>:: 2023-09-15T09:29:27,989 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:27,989 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:27,990 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-15T09:29:27,991 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:28,056 In lambda function, 2023-09-15T09:29:28,057 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:28,057 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:28,058 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:28,059 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:28,059 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:29:28,060 203 | v.insert(v.begin() + i, x); 2023-09-15T09:29:28,061 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:28,061 In lambda function, 2023-09-15T09:29:28,062 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:28,062 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:28,063 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:28,064 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:28,065 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:29:28,065 203 | v.insert(v.begin() + i, x); 2023-09-15T09:29:28,066 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:28,157 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-15T09:29:28,158 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-15T09:29:28,158 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:28,159 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:29:28,160 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:28,160 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:28,161 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:28,162 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:29:28,163 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:29:28,163 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-15T09:29:28,164 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-15T09:29:28,164 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:28,165 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:29:28,165 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:28,166 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:28,167 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:28,167 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:29:28,168 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:29:28,248 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-15T09:29:28,248 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-15T09:29:28,249 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:28,249 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:28,250 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:28,251 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:28,251 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:28,252 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:29:28,253 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:29:28,253 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-15T09:29:28,254 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-15T09:29:28,254 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:28,255 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Assembly::Operator&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:28,256 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:28,256 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly::Operator&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly::Operator&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:28,257 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:28,258 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:29:28,258 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:29:28,369 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Assembly::Operator}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-15T09:29:28,369 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:29:28,370 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::iterable&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:177:32: 2023-09-15T09:29:28,370 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:28,371 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:29:28,372 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:28,839 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-15T09:29:28,840 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:29:28,841 739 | vector<_Tp, _Alloc>:: 2023-09-15T09:29:28,841 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:28,842 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:28,843 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:28,946 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-15T09:29:28,947 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-15T09:29:28,948 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-15T09:29:28,948 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:28,949 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:28,949 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:28,950 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:28,951 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:29:28,952 1779 | _M_range_insert(__pos, __first, __last, 2023-09-15T09:29:28,952 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:28,953 1780 | std::__iterator_category(__first)); 2023-09-15T09:29:28,953 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:28,954 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:28,954 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-15T09:29:28,955 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-15T09:29:28,955 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-15T09:29:28,956 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:28,957 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:28,957 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:28,958 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:28,959 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:29:28,959 1779 | _M_range_insert(__pos, __first, __last, 2023-09-15T09:29:28,960 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:28,961 1780 | std::__iterator_category(__first)); 2023-09-15T09:29:28,961 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:28,962 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:30,071 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Assembly&}; _Tp = gemmi::Assembly; _Alloc = std::allocator]’: 2023-09-15T09:29:30,071 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:29:30,072 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:29:30,073 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:30,202 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’: 2023-09-15T09:29:30,202 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:29:30,203 133 | vector<_Tp, _Alloc>:: 2023-09-15T09:29:30,204 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:30,204 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:30,205 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-15T09:29:30,206 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:30,281 In lambda function, 2023-09-15T09:29:30,282 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Assembly&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:30,282 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Assembly&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:30,283 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:30,284 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:30,285 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:29:30,285 203 | v.insert(v.begin() + i, x); 2023-09-15T09:29:30,286 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:30,287 In lambda function, 2023-09-15T09:29:30,287 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Assembly&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:30,288 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Assembly&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:30,289 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:30,290 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:30,290 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:29:30,291 203 | v.insert(v.begin() + i, x); 2023-09-15T09:29:30,292 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:30,372 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-15T09:29:30,373 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-15T09:29:30,373 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:30,374 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:29:30,375 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:30,375 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:30,376 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:30,377 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:29:30,378 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:29:30,378 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-15T09:29:30,379 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-15T09:29:30,380 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:30,380 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:29:30,381 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:30,382 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:30,382 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:30,383 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:29:30,384 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:29:30,561 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-15T09:29:30,562 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-15T09:29:30,562 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Assembly&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:30,563 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Assembly&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:30,564 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:30,564 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:30,565 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:30,566 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:29:30,566 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:29:30,567 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-15T09:29:30,568 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-15T09:29:30,568 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Assembly&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:30,569 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Assembly&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:30,570 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:30,571 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Assembly&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Assembly&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:30,571 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:30,572 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:29:30,572 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:29:32,318 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly; _Alloc = std::allocator]’: 2023-09-15T09:29:32,318 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:29:32,319 739 | vector<_Tp, _Alloc>:: 2023-09-15T09:29:32,319 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:32,320 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:32,321 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:32,445 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-15T09:29:32,446 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-15T09:29:32,447 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-15T09:29:32,448 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:32,448 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:32,449 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:29:32,450 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:32,450 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:29:32,451 1779 | _M_range_insert(__pos, __first, __last, 2023-09-15T09:29:32,452 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:32,452 1780 | std::__iterator_category(__first)); 2023-09-15T09:29:32,453 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:32,454 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:32,454 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly; _Alloc = std::allocator]’, 2023-09-15T09:29:32,455 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-15T09:29:32,456 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-15T09:29:32,456 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:29:32,457 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:29:32,458 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:29:32,458 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:29:32,459 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:29:32,460 1779 | _M_range_insert(__pos, __first, __last, 2023-09-15T09:29:32,460 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:32,461 1780 | std::__iterator_category(__first)); 2023-09-15T09:29:32,461 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:29:32,462 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:29:40,007 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/mol.cpp -o build/temp.linux-armv7l-cpython-311/python/mol.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:30:33,192 In file included from /usr/include/c++/12/vector:70, 2023-09-15T09:30:33,192 from include/gemmi/model.hpp:15, 2023-09-15T09:30:33,193 from python/mol.cpp:3: 2023-09-15T09:30:33,193 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator, iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-15T09:30:33,194 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:30:33,195 189 | vector<_Tp, _Alloc>:: 2023-09-15T09:30:33,196 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:30:33,196 /usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:30:33,308 In file included from /usr/include/c++/12/vector:64: 2023-09-15T09:30:33,308 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-15T09:30:33,309 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Atom; F = trim_to_alanine(Residue&)::]’ at include/gemmi/util.hpp:232:10, 2023-09-15T09:30:33,309 inlined from ‘bool gemmi::trim_to_alanine(Residue&)’ at include/gemmi/polyheur.hpp:351:19: 2023-09-15T09:30:33,310 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:30:33,310 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-15T09:30:33,311 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:30:34,986 In file included from /usr/include/c++/12/algorithm:60, 2023-09-15T09:30:34,986 from include/gemmi/model.hpp:8: 2023-09-15T09:30:34,986 /usr/include/c++/12/bits/stl_algobase.h: In function ‘_ForwardIterator std::__remove_if(_ForwardIterator, _ForwardIterator, _Predicate) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred(Residue&):: >]’: 2023-09-15T09:30:34,987 /usr/include/c++/12/bits/stl_algobase.h:2131:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:30:34,987 2131 | __remove_if(_ForwardIterator __first, _ForwardIterator __last, 2023-09-15T09:30:34,988 | ^~~~~~~~~~~ 2023-09-15T09:30:34,989 /usr/include/c++/12/bits/stl_algobase.h:2131:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:30:35,039 In file included from /usr/include/c++/12/algorithm:61: 2023-09-15T09:30:35,039 In function ‘_FIter std::remove_if(_FIter, _FIter, _Predicate) [with _FIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::remove_hydrogens(Residue&)::]’, 2023-09-15T09:30:35,040 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Atom; F = remove_hydrogens(Residue&)::]’ at include/gemmi/util.hpp:232:25, 2023-09-15T09:30:35,041 inlined from ‘void gemmi::remove_hydrogens(T&) [with T = Residue]’ at include/gemmi/polyheur.hpp:310:19: 2023-09-15T09:30:35,041 /usr/include/c++/12/bits/stl_algo.h:877:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:30:35,042 877 | return std::__remove_if(__first, __last, 2023-09-15T09:30:35,043 | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2023-09-15T09:30:35,043 878 | __gnu_cxx::__ops::__pred_iter(__pred)); 2023-09-15T09:30:35,044 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:30:35,045 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-15T09:30:35,045 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Atom; F = remove_hydrogens(Residue&)::]’ at include/gemmi/util.hpp:232:10, 2023-09-15T09:30:35,046 inlined from ‘void gemmi::remove_hydrogens(T&) [with T = Residue]’ at include/gemmi/polyheur.hpp:310:19: 2023-09-15T09:30:35,047 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:30:35,048 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-15T09:30:35,048 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:30:35,060 In function ‘_FIter std::remove_if(_FIter, _FIter, _Predicate) [with _FIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::remove_hydrogens(Residue&)::]’, 2023-09-15T09:30:35,061 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Atom; F = remove_hydrogens(Residue&)::]’ at include/gemmi/util.hpp:232:25, 2023-09-15T09:30:35,062 inlined from ‘void gemmi::remove_hydrogens(T&) [with T = Residue]’ at include/gemmi/polyheur.hpp:310:19, 2023-09-15T09:30:35,062 inlined from ‘void gemmi::remove_hydrogens(T&) [with T = Chain]’ at include/gemmi/polyheur.hpp:307:21, 2023-09-15T09:30:35,063 inlined from ‘void gemmi::remove_hydrogens(T&) [with T = Model]’ at include/gemmi/polyheur.hpp:307:21, 2023-09-15T09:30:35,063 inlined from ‘void gemmi::remove_hydrogens(T&) [with T = Structure]’ at include/gemmi/polyheur.hpp:307:21: 2023-09-15T09:30:35,064 /usr/include/c++/12/bits/stl_algo.h:877:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:30:35,064 877 | return std::__remove_if(__first, __last, 2023-09-15T09:30:35,065 | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2023-09-15T09:30:35,066 878 | __gnu_cxx::__ops::__pred_iter(__pred)); 2023-09-15T09:30:35,066 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:30:35,067 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-15T09:30:35,068 inlined from ‘void gemmi::vector_remove_if(std::vector&, F&&) [with T = Atom; F = remove_hydrogens(Residue&)::]’ at include/gemmi/util.hpp:232:10, 2023-09-15T09:30:35,068 inlined from ‘void gemmi::remove_hydrogens(T&) [with T = Residue]’ at include/gemmi/polyheur.hpp:310:19, 2023-09-15T09:30:35,069 inlined from ‘void gemmi::remove_hydrogens(T&) [with T = Chain]’ at include/gemmi/polyheur.hpp:307:21, 2023-09-15T09:30:35,069 inlined from ‘void gemmi::remove_hydrogens(T&) [with T = Model]’ at include/gemmi/polyheur.hpp:307:21, 2023-09-15T09:30:35,070 inlined from ‘void gemmi::remove_hydrogens(T&) [with T = Structure]’ at include/gemmi/polyheur.hpp:307:21: 2023-09-15T09:30:35,071 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:30:35,071 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-15T09:30:35,072 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:30:43,739 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-15T09:30:43,740 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:30:43,741 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:30:43,742 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:30:43,795 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::FTransform&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-15T09:30:43,796 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:30:43,849 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Transform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-15T09:30:43,850 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:30:43,897 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::FTransform&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-15T09:30:43,898 inlined from ‘void gemmi::UnitCell::add_ncs_images_to_cs_images(const std::vector&)’ at include/gemmi/unitcell.hpp:327:28: 2023-09-15T09:30:43,898 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:30:43,899 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:30:43,899 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:30:43,900 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Transform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-15T09:30:43,901 inlined from ‘void gemmi::UnitCell::add_ncs_images_to_cs_images(const std::vector&)’ at include/gemmi/unitcell.hpp:329:30: 2023-09-15T09:30:43,901 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:30:43,902 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:30:43,902 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:30:44,589 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-15T09:30:44,590 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:30:44,590 175 | vector<_Tp, _Alloc>:: 2023-09-15T09:30:44,591 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:30:44,628 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-15T09:30:44,628 inlined from ‘void remove_child(P&, int) [with P = gemmi::Residue]’ at python/mol.cpp:39:17: 2023-09-15T09:30:44,629 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:30:44,629 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:30:44,630 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:30:44,728 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-15T09:30:44,729 inlined from ‘void gemmi::remove_alternative_conformations(T&) [with T = Chain]’ at include/gemmi/polyheur.hpp:299:28: 2023-09-15T09:30:44,730 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:30:44,730 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:30:44,731 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:30:46,388 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-15T09:30:46,389 inlined from ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const gemmi::SpaceGroup*)’ at include/gemmi/unitcell.hpp:317:26: 2023-09-15T09:30:46,390 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:30:46,390 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:30:46,391 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:30:47,121 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-15T09:30:47,121 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:30:47,122 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:30:47,122 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:30:49,618 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-15T09:30:49,619 inlined from ‘void delitem_range(std::vector&, pybind11::ssize_t, pybind11::ssize_t) [with Item = gemmi::Atom]’ at python/common.h:58:14, 2023-09-15T09:30:49,619 inlined from ‘void delitem_slice(Items&, const pybind11::slice&) [with Items = std::vector]’ at python/common.h:68:18, 2023-09-15T09:30:49,620 inlined from ‘void remove_children(P&, pybind11::slice) [with P = gemmi::Residue]’ at python/mol.cpp:43:16: 2023-09-15T09:30:49,620 /usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:30:49,621 1561 | return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg)); 2023-09-15T09:30:49,622 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:30:49,622 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-15T09:30:49,623 inlined from ‘void delitem_at_index(std::vector&, pybind11::ssize_t) [with Item = gemmi::Atom]’ at python/common.h:53:14, 2023-09-15T09:30:49,624 inlined from ‘void delitem_slice(Items&, const pybind11::slice&) [with Items = std::vector]’ at python/common.h:71:23, 2023-09-15T09:30:49,624 inlined from ‘void remove_children(P&, pybind11::slice) [with P = gemmi::Residue]’ at python/mol.cpp:43:16: 2023-09-15T09:30:49,625 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:30:49,626 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:30:49,627 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:30:53,352 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-15T09:30:53,353 inlined from ‘void gemmi::expand_ncs(Structure&, HowToNameCopiedChain)’ at include/gemmi/assembly.hpp:272:37: 2023-09-15T09:30:53,354 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:30:53,354 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:30:53,355 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:31:12,786 In file included from python/common.h:3, 2023-09-15T09:31:12,786 from python/mol.cpp:9: 2023-09-15T09:31:12,787 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, const gemmi::Atom&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = const gemmi::Atom&; Extra = {}]’: 2023-09-15T09:31:12,787 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:12,788 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-15T09:31:12,789 | ^~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:12,789 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:13,225 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access, gemmi::Atom> >, gemmi::Atom&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = gemmi::BidirIterator, gemmi::Atom> >; Sentinel = gemmi::BidirIterator, gemmi::Atom> >; ValueType = gemmi::Atom&; Extra = {}]’: 2023-09-15T09:31:13,226 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-15T09:31:13,227 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-15T09:31:21,723 In file included from /usr/include/c++/12/vector:63: 2023-09-15T09:31:21,724 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*]’: 2023-09-15T09:31:21,725 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:21,726 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:31:21,726 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:31:21,727 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:21,794 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; bool _TrivialValueTypes = false]’, 2023-09-15T09:31:21,795 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:31:21,795 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; _Tp = gemmi::NcsOp]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:31:21,796 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:31:21,796 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-15T09:31:21,797 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:21,798 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:31:21,798 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:21,843 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; bool _TrivialValueTypes = false]’, 2023-09-15T09:31:21,843 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:31:21,844 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; _Tp = gemmi::NcsOp]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:31:21,844 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:31:21,845 inlined from ‘pybind11::detail::type_caster_base >::make_copy_constructor >(const std::vector*)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/type_caster_base.h:1152:55, 2023-09-15T09:31:21,846 inlined from ‘static constexpr void* pybind11::detail::type_caster_base >::make_copy_constructor >(const std::vector*)::::_FUN(const void*)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/type_caster_base.h:1152:16: 2023-09-15T09:31:21,846 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:21,847 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:31:21,847 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:21,944 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*]’: 2023-09-15T09:31:21,945 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:21,945 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:31:21,946 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:31:21,946 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:22,177 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; bool _TrivialValueTypes = false]’, 2023-09-15T09:31:22,178 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:31:22,178 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; _Tp = gemmi::Connection]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:31:22,179 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:31:22,179 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-15T09:31:22,180 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:22,181 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:31:22,181 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:22,282 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; bool _TrivialValueTypes = false]’, 2023-09-15T09:31:22,283 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:31:22,283 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; _Tp = gemmi::Connection]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:31:22,284 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:31:22,284 inlined from ‘pybind11::detail::type_caster_base >::make_copy_constructor >(const std::vector*)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/type_caster_base.h:1152:55, 2023-09-15T09:31:22,285 inlined from ‘static constexpr void* pybind11::detail::type_caster_base >::make_copy_constructor >(const std::vector*)::::_FUN(const void*)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/type_caster_base.h:1152:16: 2023-09-15T09:31:22,285 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:22,286 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:31:22,287 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:22,839 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’: 2023-09-15T09:31:22,840 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:22,840 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:31:22,841 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:31:22,842 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:23,998 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Atom}; _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-15T09:31:23,998 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:31:23,999 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:31:23,999 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:24,122 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_insert_rval(const_iterator, value_type&&) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-15T09:31:24,123 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, value_type&&) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1389:30, 2023-09-15T09:31:24,123 inlined from ‘C& add_item(T&, C, int) [with T = std::vector; C = gemmi::Atom]’ at python/mol.cpp:24:27, 2023-09-15T09:31:24,124 inlined from ‘C& add_child(P&, C, int) [with P = gemmi::Residue; C = gemmi::Atom]’ at python/mol.cpp:29:18: 2023-09-15T09:31:24,124 /usr/include/c++/12/bits/vector.tcc:366:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:24,125 366 | _M_realloc_insert(begin() + __n, std::move(__v)); 2023-09-15T09:31:24,126 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:28,220 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = gemmi::BidirIterator, gemmi::Atom> >; Sentinel = gemmi::BidirIterator, gemmi::Atom> >; ValueType = gemmi::Atom&; Extra = {}]’, 2023-09-15T09:31:28,221 inlined from ‘pybind11::iterator pybind11::make_iterator(Type&, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Type = gemmi::UniqProxy; Extra = {}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2457:74, 2023-09-15T09:31:28,221 inlined from ‘add_mol(pybind11::module&)::&)>’ at python/mol.cpp:246:38, 2023-09-15T09:31:28,222 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = add_mol(pybind11::module&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {gemmi::UniqProxy > >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:31:28,222 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = add_mol(pybind11::module&)::&)>&; Args = {gemmi::UniqProxy > >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:31:28,223 inlined from ‘pybind11::cpp_function::initialize&)>, pybind11::iterator, gemmi::UniqProxy > >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&)>&&, pybind11::iterator (*)(gemmi::UniqProxy&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-15T09:31:28,224 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize&)>, pybind11::iterator, gemmi::UniqProxy > >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&)>&&, pybind11::iterator (*)(gemmi::UniqProxy&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:31:28,224 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-15T09:31:28,225 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:31:28,226 | ^ 2023-09-15T09:31:28,226 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-15T09:31:28,227 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-15T09:31:28,227 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = gemmi::BidirIterator, gemmi::Atom> >; Sentinel = gemmi::BidirIterator, gemmi::Atom> >; ValueType = gemmi::Atom&; Extra = {}]’, 2023-09-15T09:31:28,228 inlined from ‘pybind11::iterator pybind11::make_iterator(Type&, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Type = gemmi::UniqProxy; Extra = {}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2457:74, 2023-09-15T09:31:28,228 inlined from ‘add_mol(pybind11::module&)::&)>’ at python/mol.cpp:246:38, 2023-09-15T09:31:28,229 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = add_mol(pybind11::module&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {gemmi::UniqProxy > >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:31:28,230 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = add_mol(pybind11::module&)::&)>&; Args = {gemmi::UniqProxy > >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:31:28,230 inlined from ‘pybind11::cpp_function::initialize&)>, pybind11::iterator, gemmi::UniqProxy > >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&)>&&, pybind11::iterator (*)(gemmi::UniqProxy&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-15T09:31:28,231 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize&)>, pybind11::iterator, gemmi::UniqProxy > >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&)>&&, pybind11::iterator (*)(gemmi::UniqProxy&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:31:28,231 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-15T09:31:28,232 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:31:28,232 | ^ 2023-09-15T09:31:28,233 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-15T09:31:28,234 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘gemmi::BidirIterator, gemmi::Atom> >’ changed in GCC 7.1 2023-09-15T09:31:32,735 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = const gemmi::Atom&; Extra = {}]’, 2023-09-15T09:31:32,736 inlined from ‘pybind11::iterator pybind11::make_iterator(Type&, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Type = const std::vector; Extra = {}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2457:74, 2023-09-15T09:31:32,737 inlined from ‘add_mol(pybind11::module&)::’ at python/mol.cpp:394:43, 2023-09-15T09:31:32,737 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = add_mol(pybind11::module&)::&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {const gemmi::Residue&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:31:32,738 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = add_mol(pybind11::module&)::&; Args = {const gemmi::Residue&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:31:32,738 inlined from ‘pybind11::cpp_function::initialize, pybind11::iterator, const gemmi::Residue&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&&, pybind11::iterator (*)(const gemmi::Residue&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-15T09:31:32,739 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::iterator, const gemmi::Residue&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&&, pybind11::iterator (*)(const gemmi::Residue&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:31:32,739 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:32,740 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:31:32,740 | ^ 2023-09-15T09:31:32,741 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = const gemmi::Atom&; Extra = {}]’, 2023-09-15T09:31:32,742 inlined from ‘pybind11::iterator pybind11::make_iterator(Type&, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Type = const std::vector; Extra = {}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2457:74, 2023-09-15T09:31:32,742 inlined from ‘add_mol(pybind11::module&)::’ at python/mol.cpp:394:43, 2023-09-15T09:31:32,743 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = add_mol(pybind11::module&)::&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {const gemmi::Residue&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:31:32,744 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = add_mol(pybind11::module&)::&; Args = {const gemmi::Residue&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:31:32,744 inlined from ‘pybind11::cpp_function::initialize, pybind11::iterator, const gemmi::Residue&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&&, pybind11::iterator (*)(const gemmi::Residue&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-15T09:31:32,745 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::iterator, const gemmi::Residue&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(add_mol(pybind11::module&)::&&, pybind11::iterator (*)(const gemmi::Residue&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:31:32,745 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:32,746 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:31:32,746 | ^ 2023-09-15T09:31:36,293 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-15T09:31:36,294 inlined from ‘add_mol(pybind11::module&)::’ at python/mol.cpp:408:28, 2023-09-15T09:31:36,294 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = add_mol(pybind11::module&)::&; unsigned int ...Is = {0, 1, 2, 3}; Guard = pybind11::detail::void_type; Args = {gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, gemmi::Element}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:31:36,295 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = add_mol(pybind11::module&)::&; Args = {gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, gemmi::Element}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:31:36,296 inlined from ‘pybind11::cpp_function::initialize, void, gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, gemmi::Element, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, pybind11::arg_v>(add_mol(pybind11::module&)::&&, void (*)(gemmi::Residue&, const std::__cxx11::basic_string&, char, gemmi::Element), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const pybind11::arg_v&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:31:36,296 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, void, gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, gemmi::Element, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, pybind11::arg_v>(add_mol(pybind11::module&)::&&, void (*)(gemmi::Residue&, const std::__cxx11::basic_string&, char, gemmi::Element), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const pybind11::arg_v&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:31:36,297 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:36,297 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:31:36,298 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:36,298 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-15T09:31:36,299 inlined from ‘add_mol(pybind11::module&)::’ at python/mol.cpp:408:28, 2023-09-15T09:31:36,300 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = add_mol(pybind11::module&)::&; unsigned int ...Is = {0, 1, 2, 3}; Guard = pybind11::detail::void_type; Args = {gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, gemmi::Element}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:31:36,300 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = add_mol(pybind11::module&)::&; Args = {gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, gemmi::Element}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:31:36,301 inlined from ‘pybind11::cpp_function::initialize, void, gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, gemmi::Element, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, pybind11::arg_v>(add_mol(pybind11::module&)::&&, void (*)(gemmi::Residue&, const std::__cxx11::basic_string&, char, gemmi::Element), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const pybind11::arg_v&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:31:36,302 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, void, gemmi::Residue&, const std::__cxx11::basic_string, std::allocator >&, char, gemmi::Element, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, pybind11::arg_v>(add_mol(pybind11::module&)::&&, void (*)(gemmi::Residue&, const std::__cxx11::basic_string&, char, gemmi::Element), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const pybind11::arg_v&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:31:36,302 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:36,303 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:31:36,303 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:38,298 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’: 2023-09-15T09:31:38,299 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:38,300 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:31:38,300 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:31:38,301 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:38,489 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’: 2023-09-15T09:31:38,490 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:38,491 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:38,493 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; bool _TrivialValueTypes = false]’, 2023-09-15T09:31:38,493 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:31:38,494 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; _Tp = gemmi::TlsGroup]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:31:38,494 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:31:38,495 inlined from ‘gemmi::RefinementInfo::RefinementInfo(const gemmi::RefinementInfo&)’ at include/gemmi/metadata.hpp:117:8, 2023-09-15T09:31:38,496 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::RefinementInfo; _Args = {const gemmi::RefinementInfo&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-15T09:31:38,496 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21: 2023-09-15T09:31:38,497 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:38,498 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:31:38,498 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:38,719 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’: 2023-09-15T09:31:38,720 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:38,720 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:31:38,721 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:31:38,721 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:38,848 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; bool _TrivialValueTypes = false]’, 2023-09-15T09:31:38,849 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:31:38,849 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; _Tp = gemmi::ExperimentInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:31:38,850 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:31:38,851 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-15T09:31:38,851 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:38,852 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:31:38,852 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:38,853 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’, 2023-09-15T09:31:38,853 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:31:38,854 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; _Tp = gemmi::CrystalInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:31:38,855 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:31:38,855 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-15T09:31:38,856 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:38,857 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:31:38,857 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:38,858 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; bool _TrivialValueTypes = false]’, 2023-09-15T09:31:38,859 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:31:38,859 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; _Tp = gemmi::RefinementInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:31:38,860 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:31:38,860 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-15T09:31:38,861 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:38,861 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:31:38,862 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:38,960 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’: 2023-09-15T09:31:38,961 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:38,961 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:31:38,962 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:31:38,963 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:39,041 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; bool _TrivialValueTypes = false]’, 2023-09-15T09:31:39,042 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:31:39,043 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:31:39,043 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:31:39,044 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-15T09:31:39,045 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:39,045 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:31:39,046 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:39,125 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; bool _TrivialValueTypes = false]’, 2023-09-15T09:31:39,125 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:31:39,126 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:31:39,127 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:31:39,127 inlined from ‘gemmi::Assembly::Gen::Gen(const gemmi::Assembly::Gen&)’ at include/gemmi/metadata.hpp:312:10, 2023-09-15T09:31:39,128 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::Assembly::Gen; _Args = {const gemmi::Assembly::Gen&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-15T09:31:39,128 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Gen*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21: 2023-09-15T09:31:39,129 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:39,129 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:31:39,130 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:39,264 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; bool _TrivialValueTypes = false]’, 2023-09-15T09:31:39,265 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:31:39,266 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly::Operator*; _Tp = gemmi::Assembly::Operator]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:31:39,266 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:31:39,267 inlined from ‘gemmi::Assembly::Gen::Gen(const gemmi::Assembly::Gen&)’ at include/gemmi/metadata.hpp:312:10, 2023-09-15T09:31:39,267 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::Assembly::Gen; _Args = {gemmi::Assembly::Gen&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-15T09:31:39,268 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21, 2023-09-15T09:31:39,268 inlined from ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*; bool _TrivialValueTypes = false]’ at /usr/include/c++/12/bits/stl_uninitialized.h:137:32, 2023-09-15T09:31:39,269 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:31:39,269 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = gemmi::Assembly::Gen*; _ForwardIterator = gemmi::Assembly::Gen*; _Tp = gemmi::Assembly::Gen]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:31:39,270 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly::Gen; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:251:35: 2023-09-15T09:31:39,271 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:39,272 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:31:39,272 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:39,399 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’: 2023-09-15T09:31:39,400 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:39,401 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:31:39,401 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:31:39,402 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:39,650 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’, 2023-09-15T09:31:39,651 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:31:39,651 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; _Tp = gemmi::Assembly]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:31:39,652 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:31:39,652 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-15T09:31:39,653 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:39,654 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:31:39,654 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:39,927 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; bool _TrivialValueTypes = false]’, 2023-09-15T09:31:39,928 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:31:39,928 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::NcsOp*; _Tp = gemmi::NcsOp]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:31:39,929 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::NcsOp; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:31:39,930 inlined from ‘gemmi::Structure::Structure(const gemmi::Structure&)’ at include/gemmi/model.hpp:852:8: 2023-09-15T09:31:39,930 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:39,931 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:31:39,932 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:39,932 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; bool _TrivialValueTypes = false]’, 2023-09-15T09:31:39,933 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:31:39,933 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Connection*; _Tp = gemmi::Connection]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:31:39,934 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Connection; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:31:39,935 inlined from ‘gemmi::Structure::Structure(const gemmi::Structure&)’ at include/gemmi/model.hpp:852:8: 2023-09-15T09:31:39,935 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:39,936 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:31:39,936 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:39,937 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’, 2023-09-15T09:31:39,938 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:31:39,938 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; _Tp = gemmi::Assembly]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:31:39,939 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:31:39,939 inlined from ‘gemmi::Structure::Structure(const gemmi::Structure&)’ at include/gemmi/model.hpp:852:8: 2023-09-15T09:31:39,940 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:39,941 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:31:39,941 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:40,108 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’, 2023-09-15T09:31:40,109 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:31:40,110 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; _Tp = gemmi::Assembly]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:31:40,110 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:31:40,111 inlined from ‘pybind11::detail::type_caster_base >::make_copy_constructor >(const std::vector*)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/type_caster_base.h:1152:55, 2023-09-15T09:31:40,111 inlined from ‘static constexpr void* pybind11::detail::type_caster_base >::make_copy_constructor >(const std::vector*)::::_FUN(const void*)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/type_caster_base.h:1152:16: 2023-09-15T09:31:40,112 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:31:40,112 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:31:40,113 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:31:41,466 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/monlib.cpp -o build/temp.linux-armv7l-cpython-311/python/monlib.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:32:27,196 In file included from /usr/include/c++/12/vector:70, 2023-09-15T09:32:27,196 from include/gemmi/monlib.hpp:12, 2023-09-15T09:32:27,197 from python/monlib.cpp:3: 2023-09-15T09:32:27,197 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’: 2023-09-15T09:32:27,198 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:32:27,199 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:32:27,199 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:32:27,300 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-15T09:32:27,301 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:32:27,301 inlined from ‘gemmi::Restraints::Plane& gemmi::Restraints::get_or_add_plane(const std::string&)’ at include/gemmi/chemcomp.hpp:270:21: 2023-09-15T09:32:27,302 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:32:27,303 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:32:27,303 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:32:27,552 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-15T09:32:27,553 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:32:27,553 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:32:27,554 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:32:27,638 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Bond}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-15T09:32:27,638 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:32:27,639 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:32:27,640 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:32:27,743 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Angle}; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-15T09:32:27,744 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:32:27,744 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:32:27,745 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:32:27,843 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Angle}; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-15T09:32:27,843 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:32:27,844 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:32:27,845 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:32:27,984 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Torsion}; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-15T09:32:27,984 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:32:27,985 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:32:27,986 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:32:28,108 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Torsion}; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-15T09:32:28,109 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:32:28,109 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:32:28,110 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:32:58,269 In file included from /usr/include/c++/12/vector:63: 2023-09-15T09:32:58,269 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*]’: 2023-09-15T09:32:58,270 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:32:58,271 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:32:58,271 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:32:58,272 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:32:58,372 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*; bool _TrivialValueTypes = false]’, 2023-09-15T09:32:58,373 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:32:58,373 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*; _Tp = gemmi::Restraints::Bond]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:32:58,374 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:32:58,375 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-15T09:32:58,375 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:32:58,376 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:32:58,377 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:32:58,475 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’: 2023-09-15T09:32:58,476 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:32:58,476 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:32:58,477 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:32:58,477 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:32:58,588 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; bool _TrivialValueTypes = false]’, 2023-09-15T09:32:58,589 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:32:58,589 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; _Tp = gemmi::Restraints::Angle]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:32:58,590 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:32:58,590 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-15T09:32:58,591 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:32:58,592 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:32:58,592 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:32:58,692 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’: 2023-09-15T09:32:58,693 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:32:58,694 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:32:58,694 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:32:58,695 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:32:58,847 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; bool _TrivialValueTypes = false]’, 2023-09-15T09:32:58,847 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:32:58,848 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; _Tp = gemmi::Restraints::Torsion]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:32:58,848 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:32:58,849 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-15T09:32:58,849 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:32:58,850 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:32:58,851 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:32:59,855 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’: 2023-09-15T09:32:59,856 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:32:59,856 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:32:59,857 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:32:59,857 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:32:59,934 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*; bool _TrivialValueTypes = false]’, 2023-09-15T09:32:59,935 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:32:59,936 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*; _Tp = gemmi::Restraints::Bond]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:32:59,936 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:32:59,937 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-15T09:32:59,937 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:32:59,938 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:32:59,938 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:32:59,939 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; bool _TrivialValueTypes = false]’, 2023-09-15T09:32:59,940 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:32:59,940 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; _Tp = gemmi::Restraints::Angle]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:32:59,941 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:32:59,941 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-15T09:32:59,942 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:32:59,942 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:32:59,943 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:32:59,943 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; bool _TrivialValueTypes = false]’, 2023-09-15T09:32:59,944 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:32:59,944 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; _Tp = gemmi::Restraints::Torsion]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:32:59,946 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:32:59,946 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-15T09:32:59,947 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:32:59,947 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:32:59,948 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:32:59,948 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; bool _TrivialValueTypes = false]’, 2023-09-15T09:32:59,949 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:32:59,949 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; _Tp = gemmi::Restraints::Plane]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:32:59,950 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:32:59,950 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-15T09:32:59,951 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:32:59,952 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:32:59,952 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:33:03,003 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; bool _TrivialValueTypes = false]’, 2023-09-15T09:33:03,004 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:33:03,004 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; _Tp = gemmi::Restraints::Plane]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:33:03,005 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:33:03,006 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-15T09:33:03,006 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:33:03,007 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:33:03,007 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:33:05,384 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/mtz.cpp -o build/temp.linux-armv7l-cpython-311/python/mtz.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:33:59,640 In file included from /usr/include/c++/12/vector:70, 2023-09-15T09:33:59,640 from include/gemmi/mtz.hpp:17, 2023-09-15T09:33:59,641 from python/mtz.cpp:3: 2023-09-15T09:33:59,642 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-15T09:33:59,643 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:33:59,643 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:33:59,644 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:02,656 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-15T09:34:02,657 inlined from ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const gemmi::SpaceGroup*)’ at include/gemmi/unitcell.hpp:317:26: 2023-09-15T09:34:02,658 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:02,659 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:34:02,660 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:03,074 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-15T09:34:03,074 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:34:03,075 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:34:03,075 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:03,173 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-15T09:34:03,174 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::FTransform; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:34:03,175 inlined from ‘gemmi::UnitCell gemmi::UnitCell::changed_basis_backward(const gemmi::Op&, bool)’ at include/gemmi/unitcell.hpp:278:34: 2023-09-15T09:34:03,176 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:03,177 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:34:03,178 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:15,552 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Mtz::Dataset&}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-15T09:34:15,553 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:34:15,554 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:34:15,554 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:15,753 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-15T09:34:15,754 /usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:34:15,755 133 | vector<_Tp, _Alloc>:: 2023-09-15T09:34:15,755 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:15,757 /usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:15,758 164 | _M_realloc_insert(begin() + (__position - cbegin()), __x); 2023-09-15T09:34:15,758 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:16,194 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-15T09:34:16,194 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:34:16,195 739 | vector<_Tp, _Alloc>:: 2023-09-15T09:34:16,196 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:16,197 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:16,197 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:16,432 /usr/include/c++/12/bits/vector.tcc: In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-15T09:34:16,433 /usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:34:16,433 175 | vector<_Tp, _Alloc>:: 2023-09-15T09:34:16,434 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:18,200 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-15T09:34:18,201 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:34:18,201 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:34:18,202 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:18,307 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’: 2023-09-15T09:34:18,308 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:18,308 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:34:18,309 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:26,172 In file included from python/common.h:3, 2023-09-15T09:34:26,173 from python/mtz.cpp:9: 2023-09-15T09:34:26,174 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::iterator pybind11::detail::make_iterator_impl(Iterator, Sentinel, Extra&& ...) [with Access = iterator_access<__gnu_cxx::__normal_iterator >, gemmi::Mtz::Dataset&>; pybind11::return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Mtz::Dataset&; Extra = {}]’: 2023-09-15T09:34:26,174 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:26,175 2372 | iterator make_iterator_impl(Iterator first, Sentinel last, Extra &&...extra) { 2023-09-15T09:34:26,176 | ^~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:26,176 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2372:10: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:30,765 In file included from /usr/include/c++/12/vector:64: 2023-09-15T09:34:30,766 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-15T09:34:30,766 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-15T09:34:30,767 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:34:30,768 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:34:30,768 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:34:30,769 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:34:30,770 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:30,770 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:34:30,771 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:30,772 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-15T09:34:30,773 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:300:28, 2023-09-15T09:34:30,773 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:34:30,774 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:34:30,774 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:34:30,775 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, void, std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, void (*)(std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[42])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:34:30,776 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:30,777 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:34:30,778 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:31,037 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-15T09:34:31,038 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-15T09:34:31,038 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:34:31,039 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:34:31,040 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:34:31,041 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:34:31,042 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:31,043 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:34:31,044 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:34:31,045 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-15T09:34:31,046 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:251:31, 2023-09-15T09:34:31,047 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = std::vector*; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:34:31,047 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = std::vector*; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&; Args = {const std::vector >&, const pybind11::slice&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1448:72, 2023-09-15T09:34:31,048 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:34:31,049 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>, std::vector*, const std::vector >&, const pybind11::slice&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [44]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const pybind11::slice&)>&&, std::vector* (*)(const std::vector&, const pybind11::slice&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[44])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:34:31,050 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:31,051 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:34:31,052 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:34:31,143 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-15T09:34:31,144 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-15T09:34:31,145 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Mtz::Dataset; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:34:31,145 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Mtz::Dataset; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:34:31,146 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Mtz::Dataset, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Mtz::Dataset (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17: 2023-09-15T09:34:31,147 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:31,148 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:34:31,148 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:31,149 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-15T09:34:31,149 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:226:20, 2023-09-15T09:34:31,150 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = gemmi::Mtz::Dataset; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:34:31,151 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = gemmi::Mtz::Dataset; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:34:31,151 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, gemmi::Mtz::Dataset, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [42]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, gemmi::Mtz::Dataset (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[42])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40: 2023-09-15T09:34:31,152 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:31,153 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:34:31,153 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:31,301 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-15T09:34:31,302 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-15T09:34:31,302 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-15T09:34:31,303 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:34:31,304 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:34:31,304 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:34:31,305 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:34:31,306 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:34:31,307 1779 | _M_range_insert(__pos, __first, __last, 2023-09-15T09:34:31,307 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:31,308 1780 | std::__iterator_category(__first)); 2023-09-15T09:34:31,308 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:31,309 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:31,309 In member function ‘void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-15T09:34:31,310 inlined from ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; = void; _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1481:22, 2023-09-15T09:34:31,310 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:166:52, 2023-09-15T09:34:31,311 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:34:31,312 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&; Args = {std::vector >&, const std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:34:31,313 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:34:31,313 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>, void, std::vector >&, const std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [61]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const std::vector&)>&&, void (*)(std::vector&, const std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[61])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:34:31,314 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:34:31,315 1779 | _M_range_insert(__pos, __first, __last, 2023-09-15T09:34:31,315 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:31,316 1780 | std::__iterator_category(__first)); 2023-09-15T09:34:31,317 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:31,317 /usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:31,342 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-15T09:34:31,595 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-15T09:34:31,596 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:34:31,597 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:34:31,598 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:34:31,598 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:34:31,599 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:31,600 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:34:31,600 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:34:31,601 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-15T09:34:31,602 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:148:52, 2023-09-15T09:34:31,603 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:34:31,604 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&; Args = {std::vector >&, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:34:31,604 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:34:31,605 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>, void, std::vector >&, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, char [35]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, const T&)>&&, void (*)(std::vector&, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const char (&)[35])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:34:31,606 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:31,607 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:34:31,607 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:34:35,743 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Mtz::Dataset&; Extra = {}]’, 2023-09-15T09:34:35,744 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:34:35,745 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:34:35,745 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:34:35,746 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:17, 2023-09-15T09:34:35,747 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:34:35,748 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:35,749 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:34:35,749 | ^ 2023-09-15T09:34:35,750 In function ‘pybind11::iterator pybind11::make_iterator(Iterator, Sentinel, Extra&& ...) [with return_value_policy Policy = pybind11::return_value_policy::reference_internal; Iterator = __gnu_cxx::__normal_iterator >; Sentinel = __gnu_cxx::__normal_iterator >; ValueType = gemmi::Mtz::Dataset&; Extra = {}]’, 2023-09-15T09:34:35,750 inlined from ‘pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:346:35, 2023-09-15T09:34:35,751 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = pybind11::iterator; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; unsigned int ...Is = {0}; Guard = pybind11::detail::void_type; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:91, 2023-09-15T09:34:35,751 inlined from ‘std::enable_if_t<(! std::is_void<_Dummy>::value), Return> pybind11::detail::argument_loader::call(Func&&) && [with Return = pybind11::iterator; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&; Args = {std::vector >&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1449:54, 2023-09-15T09:34:35,752 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:253:40, 2023-09-15T09:34:35,753 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>, pybind11::iterator, std::vector >&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::keep_alive<0, 1> >(pybind11::detail::vector_accessor, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&)>&&, pybind11::iterator (*)(std::vector&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::keep_alive<0, 1>&)::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:34:35,754 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:2415:91: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:35,754 2415 | Extra...>(first, last, std::forward(extra)...); 2023-09-15T09:34:35,755 | ^ 2023-09-15T09:34:36,827 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-15T09:34:36,828 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-15T09:34:36,828 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:34:36,829 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:34:36,829 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:34:36,830 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:34:36,831 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:36,831 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:34:36,832 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:36,833 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = gemmi::Mtz::Dataset; _Alloc = std::allocator]’, 2023-09-15T09:34:36,833 inlined from ‘pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:283:20, 2023-09-15T09:34:36,834 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; unsigned int ...Is = {0, 1}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:34:36,835 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&; Args = {std::vector >&, int}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:34:36,836 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:34:36,836 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>, void, std::vector >&, int, pybind11::name, pybind11::is_method, pybind11::sibling, char [40]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType)>&&, void (*)(std::vector&, int), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const char (&)[40])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:34:36,837 /usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:34:36,838 1530 | { return _M_erase(begin() + (__position - cbegin())); } 2023-09-15T09:34:36,838 | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:37,099 In file included from python/mtz.cpp:11: 2023-09-15T09:34:37,100 In lambda function, 2023-09-15T09:34:37,100 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:34:37,101 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:34:37,101 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:250:78, 2023-09-15T09:34:37,102 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:34:37,103 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:34:37,103 203 | v.insert(v.begin() + i, x); 2023-09-15T09:34:37,104 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:37,104 In lambda function, 2023-09-15T09:34:37,105 inlined from ‘Return pybind11::detail::argument_loader::call_impl(Func&&, std::index_sequence, Guard&&) && [with Return = void; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; unsigned int ...Is = {0, 1, 2}; Guard = pybind11::detail::void_type; Args = {std::vector >&, int, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1480:37, 2023-09-15T09:34:37,105 inlined from ‘std::enable_if_t::value, pybind11::detail::void_type> pybind11::detail::argument_loader::call(Func&&) && [with Return = void; Guard = pybind11::detail::void_type; Func = pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&; Args = {std::vector >&, int, const gemmi::Mtz::Dataset&}]’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:1454:65, 2023-09-15T09:34:37,106 inlined from ‘pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:254:75, 2023-09-15T09:34:37,107 inlined from ‘static constexpr pybind11::handle pybind11::cpp_function::initialize, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>, void, std::vector >&, int, const gemmi::Mtz::Dataset&, pybind11::name, pybind11::is_method, pybind11::sibling, pybind11::arg, pybind11::arg, char [36]>(pybind11::detail::vector_modifiers, pybind11::class_, std::unique_ptr >, std::default_delete > > > > >(std::enable_if_t, std::unique_ptr >, std::default_delete > > > > >&)::&, DiffType, const T&)>&&, void (*)(std::vector&, int, const gemmi::Mtz::Dataset&), const pybind11::name&, const pybind11::is_method&, const pybind11::sibling&, const pybind11::arg&, const pybind11::arg&, const char (&)[36])::::_FUN(pybind11::detail::function_call&)’ at /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:224:21: 2023-09-15T09:34:37,108 /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/stl_bind.h:203:21: note: parameter passing for argument of type ‘std::vector::const_iterator’ changed in GCC 7.1 2023-09-15T09:34:37,108 203 | v.insert(v.begin() + i, x); 2023-09-15T09:34:37,109 | ~~~~~~~~^~~~~~~~~~~~~~~~~~ 2023-09-15T09:34:51,038 In file included from include/gemmi/fourier.hpp:19, 2023-09-15T09:34:51,039 from python/mtz.cpp:5: 2023-09-15T09:34:51,039 In member function ‘pocketfft::detail::cmplx*)this)->pocketfft::detail::cmplx::r * other))> pocketfft::detail::cmplx::operator*(const T2&) const [with T2 = float; T = float]’, 2023-09-15T09:34:51,040 inlined from ‘void pocketfft::detail::fftblue::fft(pocketfft::detail::cmplx*, T0) const [with bool fwd = true; T = float; T0 = float]’ at include/gemmi/third_party/pocketfft_hdronly.h:2260:25: 2023-09-15T09:34:51,040 include/gemmi/third_party/pocketfft_hdronly.h:236:15: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::r’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-15T09:34:51,041 236 | { return {r*other, i*other}; } 2023-09-15T09:34:51,041 | ^ 2023-09-15T09:34:51,042 include/gemmi/third_party/pocketfft_hdronly.h:236:24: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::i’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-15T09:34:51,043 236 | { return {r*other, i*other}; } 2023-09-15T09:34:51,043 | ^ 2023-09-15T09:34:51,121 In member function ‘pocketfft::detail::cmplx*)this)->pocketfft::detail::cmplx::r * other))> pocketfft::detail::cmplx::operator*(const T2&) const [with T2 = float; T = float]’, 2023-09-15T09:34:51,122 inlined from ‘void pocketfft::detail::fftblue::fft(pocketfft::detail::cmplx*, T0) const [with bool fwd = false; T = float; T0 = float]’ at include/gemmi/third_party/pocketfft_hdronly.h:2260:25: 2023-09-15T09:34:51,122 include/gemmi/third_party/pocketfft_hdronly.h:236:15: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::r’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-15T09:34:51,123 236 | { return {r*other, i*other}; } 2023-09-15T09:34:51,124 | ^ 2023-09-15T09:34:51,124 include/gemmi/third_party/pocketfft_hdronly.h:236:24: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::i’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-15T09:34:51,125 236 | { return {r*other, i*other}; } 2023-09-15T09:34:51,126 | ^ 2023-09-15T09:34:55,318 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/read.cpp -o build/temp.linux-armv7l-cpython-311/python/read.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:35:36,362 In file included from /usr/include/c++/12/vector:70, 2023-09-15T09:35:36,364 from include/gemmi/iterator.hpp:9, 2023-09-15T09:35:36,366 from include/gemmi/cifdoc.hpp:8, 2023-09-15T09:35:36,369 from python/read.cpp:4: 2023-09-15T09:35:36,371 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-15T09:35:36,373 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:35:36,376 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:35:36,378 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:36,418 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::FTransform&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-15T09:35:36,421 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:35:36,472 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Transform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-15T09:35:36,685 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:35:36,686 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::FTransform&}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-15T09:35:36,687 inlined from ‘void gemmi::UnitCell::add_ncs_images_to_cs_images(const std::vector&)’ at include/gemmi/unitcell.hpp:327:28: 2023-09-15T09:35:36,687 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:35:36,688 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:35:36,688 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:36,689 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Transform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-15T09:35:36,689 inlined from ‘void gemmi::UnitCell::add_ncs_images_to_cs_images(const std::vector&)’ at include/gemmi/unitcell.hpp:329:30: 2023-09-15T09:35:36,690 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:35:36,691 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:35:36,691 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:36,692 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::SmallStructure::AtomType&}; _Tp = gemmi::SmallStructure::AtomType; _Alloc = std::allocator]’: 2023-09-15T09:35:36,693 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:35:36,693 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:35:36,694 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:37,385 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’: 2023-09-15T09:35:37,386 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:35:37,579 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::BasicRefinementInfo; _Alloc = std::allocator]’: 2023-09-15T09:35:37,580 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:35:37,699 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’: 2023-09-15T09:35:37,699 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:35:37,776 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’: 2023-09-15T09:35:37,776 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:35:37,777 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:35:37,777 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:38,021 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator]’: 2023-09-15T09:35:38,022 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:35:38,022 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:35:38,023 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:38,238 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::DiffractionInfo; _Alloc = std::allocator]’: 2023-09-15T09:35:38,239 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:35:38,239 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:35:38,240 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:38,313 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’: 2023-09-15T09:35:38,314 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:35:38,314 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:35:38,315 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:38,388 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’: 2023-09-15T09:35:38,388 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:35:38,389 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:35:38,390 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:38,423 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::ReflectionsInfo; _Alloc = std::allocator]’: 2023-09-15T09:35:38,424 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:35:38,425 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:35:38,425 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:39,316 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-15T09:35:39,317 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:35:39,379 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-15T09:35:39,380 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:35:39,380 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:35:39,381 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:39,734 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Atom&}; _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-15T09:35:39,734 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:35:39,735 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:35:39,736 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:39,818 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Atom&}; _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-15T09:35:39,819 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:35:39,819 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:35:39,820 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:41,313 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-15T09:35:41,313 inlined from ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const gemmi::SpaceGroup*)’ at include/gemmi/unitcell.hpp:317:26: 2023-09-15T09:35:41,314 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:35:41,315 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:35:41,315 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:41,888 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-15T09:35:41,889 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:35:41,889 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:35:41,890 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:42,077 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator]’: 2023-09-15T09:35:42,077 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:35:42,078 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:35:42,079 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:42,559 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >}; _Tp = gemmi::Assembly; _Alloc = std::allocator]’: 2023-09-15T09:35:42,559 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:35:42,560 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:35:42,560 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:42,642 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::__cxx11::basic_string, std::allocator >}; _Tp = gemmi::Assembly; _Alloc = std::allocator]’: 2023-09-15T09:35:42,642 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:35:42,643 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:35:42,643 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:42,808 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::NcsOp}; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’: 2023-09-15T09:35:42,809 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:35:42,810 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:35:42,811 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:42,853 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::NcsOp}; _Tp = gemmi::NcsOp; _Alloc = std::allocator]’: 2023-09-15T09:35:42,853 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:35:42,854 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:35:42,855 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:46,356 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Connection&}; _Tp = gemmi::Connection; _Alloc = std::allocator]’, 2023-09-15T09:35:46,356 inlined from ‘void gemmi::impl::read_connectivity(gemmi::cif::Block&, gemmi::Structure&)’ at include/gemmi/mmcif.hpp:240:32: 2023-09-15T09:35:46,357 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:35:46,358 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:35:46,358 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:46,927 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::ReflectionsInfo; _Alloc = std::allocator]’, 2023-09-15T09:35:46,928 inlined from ‘void gemmi::pdb_impl::read_remark_200_230_240(const char*, gemmi::Metadata&, std::string*&)’ at include/gemmi/remarks.hpp:452:52: 2023-09-15T09:35:46,928 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:35:46,929 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:35:46,929 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:49,382 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::SmallStructure::Site&}; _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator]’: 2023-09-15T09:35:49,383 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:35:49,383 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:35:49,384 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:49,762 In file included from /usr/include/c++/12/vector:64: 2023-09-15T09:35:49,763 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::SmallStructure::Site; _Alloc = std::allocator]’, 2023-09-15T09:35:49,764 inlined from ‘gemmi::SmallStructure gemmi::make_small_structure_from_block(const cif::Block&)’ at include/gemmi/smcif.hpp:74:23: 2023-09-15T09:35:49,764 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:35:49,765 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:35:49,765 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:35:49,770 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::SmallStructure::AtomType; _Alloc = std::allocator]’, 2023-09-15T09:35:49,770 inlined from ‘gemmi::SmallStructure gemmi::make_small_structure_from_block(const cif::Block&)’ at include/gemmi/smcif.hpp:106:28: 2023-09-15T09:35:49,771 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:35:49,771 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:35:49,772 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:35:53,437 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {}; _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’: 2023-09-15T09:35:53,438 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:35:53,438 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:35:53,439 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:53,573 /usr/include/c++/12/bits/vector.tcc: In function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’: 2023-09-15T09:35:53,574 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:35:53,575 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:35:53,575 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:54,299 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Assembly::Operator&}; _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’: 2023-09-15T09:35:54,300 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:35:54,301 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:35:54,301 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:35:54,613 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Assembly::Operator; _Alloc = std::allocator]’, 2023-09-15T09:35:54,614 inlined from ‘std::vector gemmi::impl::read_assemblies(gemmi::cif::Block&)’ at include/gemmi/mmcif.hpp:335:36: 2023-09-15T09:35:54,614 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:35:54,615 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:35:54,615 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:36:00,636 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const char*&}; _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’: 2023-09-15T09:36:00,637 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:36:00,638 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:36:00,638 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:36:00,730 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const char*&}; _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’, 2023-09-15T09:36:00,730 inlined from ‘void gemmi::pdb_impl::add_restraint_count_weight(gemmi::RefinementInfo&, const char*, const char*)’ at include/gemmi/remarks.hpp:94:36: 2023-09-15T09:36:00,731 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:36:00,732 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:36:00,732 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:36:00,821 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const std::__cxx11::basic_string, std::allocator >&}; _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’: 2023-09-15T09:36:00,822 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:36:00,822 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:36:00,823 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:36:00,924 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const std::__cxx11::basic_string, std::allocator >&}; _Tp = gemmi::RefinementInfo::Restr; _Alloc = std::allocator]’, 2023-09-15T09:36:00,925 inlined from ‘T& gemmi::impl::find_or_add(std::vector&, const std::string&) [with T = gemmi::RefinementInfo::Restr]’ at include/gemmi/model.hpp:42:19, 2023-09-15T09:36:00,925 inlined from ‘T& gemmi::impl::find_or_add(std::vector&, const std::string&) [with T = gemmi::RefinementInfo::Restr]’ at include/gemmi/model.hpp:39:4: 2023-09-15T09:36:00,926 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:36:00,927 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:36:00,928 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:36:01,135 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’, 2023-09-15T09:36:01,136 inlined from ‘void gemmi::pdb_impl::read_remark3_line(const char*, gemmi::Metadata&, std::string*&)’ at include/gemmi/remarks.hpp:257:39: 2023-09-15T09:36:01,137 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:36:01,137 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:36:01,137 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:36:01,141 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {}; _Tp = gemmi::BasicRefinementInfo; _Alloc = std::allocator]’, 2023-09-15T09:36:01,141 inlined from ‘void gemmi::pdb_impl::read_remark3_line(const char*, gemmi::Metadata&, std::string*&)’ at include/gemmi/remarks.hpp:317:49: 2023-09-15T09:36:01,142 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:36:01,142 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:36:01,143 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:36:02,504 In file included from /usr/include/c++/12/vector:63: 2023-09-15T09:36:02,505 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’: 2023-09-15T09:36:02,506 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:36:02,507 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:36:02,507 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:36:02,508 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:36:11,729 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’: 2023-09-15T09:36:11,729 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:36:11,730 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:36:11,824 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’: 2023-09-15T09:36:11,825 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:36:11,826 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:36:11,980 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’: 2023-09-15T09:36:11,981 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:36:11,982 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:36:11,984 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; bool _TrivialValueTypes = false]’, 2023-09-15T09:36:11,985 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:36:11,986 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::TlsGroup*; _Tp = gemmi::TlsGroup]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:36:11,986 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::TlsGroup; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:36:11,987 inlined from ‘gemmi::RefinementInfo::RefinementInfo(const gemmi::RefinementInfo&)’ at include/gemmi/metadata.hpp:117:8, 2023-09-15T09:36:11,988 inlined from ‘void std::_Construct(_Tp*, _Args&& ...) [with _Tp = gemmi::RefinementInfo; _Args = {const gemmi::RefinementInfo&}]’ at /usr/include/c++/12/bits/stl_construct.h:119:7, 2023-09-15T09:36:11,988 inlined from ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:120:21: 2023-09-15T09:36:11,989 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:36:11,990 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:36:11,990 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:36:12,192 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’: 2023-09-15T09:36:12,193 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:36:12,193 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:36:12,194 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:36:12,194 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:36:12,321 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; bool _TrivialValueTypes = false]’, 2023-09-15T09:36:12,322 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:36:12,322 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::ExperimentInfo*; _Tp = gemmi::ExperimentInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:36:12,323 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::ExperimentInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:36:12,324 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-15T09:36:12,324 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:36:12,325 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:36:12,326 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:36:12,327 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; bool _TrivialValueTypes = false]’, 2023-09-15T09:36:12,327 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:36:12,328 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::CrystalInfo*; _Tp = gemmi::CrystalInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:36:12,329 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::CrystalInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:36:12,330 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-15T09:36:12,330 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:36:12,330 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:36:12,331 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:36:12,331 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; bool _TrivialValueTypes = false]’, 2023-09-15T09:36:12,332 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:36:12,332 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::RefinementInfo*; _Tp = gemmi::RefinementInfo]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:36:12,333 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::RefinementInfo; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:36:12,334 inlined from ‘gemmi::Metadata::Metadata(const gemmi::Metadata&)’ at include/gemmi/metadata.hpp:146:8: 2023-09-15T09:36:12,334 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:36:12,335 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:36:12,335 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:36:12,574 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; bool _TrivialValueTypes = false]’, 2023-09-15T09:36:12,574 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:36:12,575 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Assembly*; _Tp = gemmi::Assembly]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:36:12,576 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Assembly; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:36:12,577 inlined from ‘gemmi::Structure::Structure(const gemmi::Structure&)’ at include/gemmi/model.hpp:852:8: 2023-09-15T09:36:12,577 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:36:12,578 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:36:12,578 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:36:18,979 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/recgrid.cpp -o build/temp.linux-armv7l-cpython-311/python/recgrid.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:37:04,871 In file included from /usr/include/c++/12/vector:70, 2023-09-15T09:37:04,872 from include/gemmi/unitcell.hpp:10, 2023-09-15T09:37:04,872 from include/gemmi/asudata.hpp:11, 2023-09-15T09:37:04,873 from include/gemmi/recgrid.hpp:8, 2023-09-15T09:37:04,873 from python/recgrid.cpp:3: 2023-09-15T09:37:04,874 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-15T09:37:04,874 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:37:04,875 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:37:04,875 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:37:04,979 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Mat33, gemmi::Vec3}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-15T09:37:04,980 inlined from ‘void gemmi::UnitCell::set_cell_images_from_spacegroup(const gemmi::SpaceGroup*)’ at include/gemmi/unitcell.hpp:317:26: 2023-09-15T09:37:04,980 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:37:04,981 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:37:04,981 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:37:42,556 In file included from include/gemmi/fourier.hpp:19, 2023-09-15T09:37:42,557 from python/recgrid.cpp:4: 2023-09-15T09:37:42,557 In member function ‘pocketfft::detail::cmplx*)this)->pocketfft::detail::cmplx::r * other))> pocketfft::detail::cmplx::operator*(const T2&) const [with T2 = float; T = float]’, 2023-09-15T09:37:42,558 inlined from ‘void pocketfft::detail::fftblue::fft(pocketfft::detail::cmplx*, T0) const [with bool fwd = true; T = float; T0 = float]’ at include/gemmi/third_party/pocketfft_hdronly.h:2260:25: 2023-09-15T09:37:42,558 include/gemmi/third_party/pocketfft_hdronly.h:236:15: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::r’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-15T09:37:42,559 236 | { return {r*other, i*other}; } 2023-09-15T09:37:42,560 | ^ 2023-09-15T09:37:42,561 include/gemmi/third_party/pocketfft_hdronly.h:236:24: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::i’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-15T09:37:42,562 236 | { return {r*other, i*other}; } 2023-09-15T09:37:42,562 | ^ 2023-09-15T09:37:42,639 In member function ‘pocketfft::detail::cmplx*)this)->pocketfft::detail::cmplx::r * other))> pocketfft::detail::cmplx::operator*(const T2&) const [with T2 = float; T = float]’, 2023-09-15T09:37:42,640 inlined from ‘void pocketfft::detail::fftblue::fft(pocketfft::detail::cmplx*, T0) const [with bool fwd = false; T = float; T0 = float]’ at include/gemmi/third_party/pocketfft_hdronly.h:2260:25: 2023-09-15T09:37:42,640 include/gemmi/third_party/pocketfft_hdronly.h:236:15: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::r’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-15T09:37:42,641 236 | { return {r*other, i*other}; } 2023-09-15T09:37:42,642 | ^ 2023-09-15T09:37:42,642 include/gemmi/third_party/pocketfft_hdronly.h:236:24: warning: ‘*(const pocketfft::detail::cmplx*)res.pocketfft::detail::cmplx::i’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-15T09:37:42,643 236 | { return {r*other, i*other}; } 2023-09-15T09:37:42,643 | ^ 2023-09-15T09:37:45,792 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/scaling.cpp -o build/temp.linux-armv7l-cpython-311/python/scaling.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:38:00,854 In file included from /usr/include/c++/12/vector:70, 2023-09-15T09:38:00,855 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/common.h:314, 2023-09-15T09:38:00,855 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../attr.h:13, 2023-09-15T09:38:00,856 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/class.h:12, 2023-09-15T09:38:00,857 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:13, 2023-09-15T09:38:00,857 from python/common.h:3, 2023-09-15T09:38:00,858 from python/scaling.cpp:3: 2023-09-15T09:38:00,859 /usr/include/c++/12/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = const double*; _Tp = double; _Alloc = std::allocator]’: 2023-09-15T09:38:00,860 /usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:38:00,860 739 | vector<_Tp, _Alloc>:: 2023-09-15T09:38:00,861 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:38:10,707 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Scaling::Point}; _Tp = gemmi::Scaling::Point; _Alloc = std::allocator::Point>]’: 2023-09-15T09:38:10,708 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::Point, std::allocator::Point> >::iterator’ changed in GCC 7.1 2023-09-15T09:38:10,708 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:38:10,709 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:38:10,782 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Scaling::Point}; _Tp = gemmi::Scaling::Point; _Alloc = std::allocator::Point>]’, 2023-09-15T09:38:10,783 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Scaling::Point; _Alloc = std::allocator::Point>]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:38:10,784 inlined from ‘void gemmi::Scaling::prepare_points(const gemmi::AsuData >&, const gemmi::AsuData >&, const gemmi::AsuData >&) [with Real = float]’ at include/gemmi/scaling.hpp:199:23: 2023-09-15T09:38:10,784 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator::Point*, std::vector::Point, std::allocator::Point> > >’ changed in GCC 7.1 2023-09-15T09:38:10,785 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:38:10,785 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:38:12,167 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2023-09-15T09:38:12,168 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:38:12,169 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:38:12,169 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:38:12,211 In file included from /usr/include/c++/12/vector:64: 2023-09-15T09:38:12,212 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-15T09:38:12,212 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:110:18: 2023-09-15T09:38:12,213 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:38:12,214 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:38:12,215 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:38:12,215 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-15T09:38:12,216 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:113:22: 2023-09-15T09:38:12,217 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:38:12,217 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:38:12,218 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:38:12,219 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-15T09:38:12,219 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:115:22: 2023-09-15T09:38:12,220 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:38:12,221 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:38:12,221 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:38:12,222 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, std::initializer_list<_Tp>) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-15T09:38:12,222 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:119:19: 2023-09-15T09:38:12,223 /usr/include/c++/12/bits/stl_vector.h:1409:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:38:12,224 1409 | _M_range_insert(begin() + __offset, __l.begin(), __l.end(), 2023-09-15T09:38:12,224 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:38:12,225 1410 | std::random_access_iterator_tag()); 2023-09-15T09:38:12,226 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:38:12,226 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, std::initializer_list<_Tp>) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-15T09:38:12,227 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:123:19: 2023-09-15T09:38:12,227 /usr/include/c++/12/bits/stl_vector.h:1409:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:38:12,228 1409 | _M_range_insert(begin() + __offset, __l.begin(), __l.end(), 2023-09-15T09:38:12,228 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:38:12,229 1410 | std::random_access_iterator_tag()); 2023-09-15T09:38:12,229 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:38:12,230 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, std::initializer_list<_Tp>) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-15T09:38:12,230 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:127:19: 2023-09-15T09:38:12,231 /usr/include/c++/12/bits/stl_vector.h:1409:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:38:12,232 1409 | _M_range_insert(begin() + __offset, __l.begin(), __l.end(), 2023-09-15T09:38:12,232 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:38:12,233 1410 | std::random_access_iterator_tag()); 2023-09-15T09:38:12,234 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:38:12,234 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, std::initializer_list<_Tp>) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-15T09:38:12,235 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:130:19: 2023-09-15T09:38:12,235 /usr/include/c++/12/bits/stl_vector.h:1409:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:38:12,236 1409 | _M_range_insert(begin() + __offset, __l.begin(), __l.end(), 2023-09-15T09:38:12,237 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:38:12,237 1410 | std::random_access_iterator_tag()); 2023-09-15T09:38:12,238 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:38:12,239 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, std::initializer_list<_Tp>) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-15T09:38:12,240 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:133:19: 2023-09-15T09:38:12,241 /usr/include/c++/12/bits/stl_vector.h:1409:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:38:12,241 1409 | _M_range_insert(begin() + __offset, __l.begin(), __l.end(), 2023-09-15T09:38:12,242 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:38:12,242 1410 | std::random_access_iterator_tag()); 2023-09-15T09:38:12,243 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:38:12,243 In member function ‘std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, std::initializer_list<_Tp>) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-15T09:38:12,244 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:136:19: 2023-09-15T09:38:12,244 /usr/include/c++/12/bits/stl_vector.h:1409:24: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:38:12,245 1409 | _M_range_insert(begin() + __offset, __l.begin(), __l.end(), 2023-09-15T09:38:12,245 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:38:12,246 1410 | std::random_access_iterator_tag()); 2023-09-15T09:38:12,246 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:38:12,247 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-15T09:38:12,247 inlined from ‘std::vector gemmi::Scaling::get_parameters() const [with Real = float]’ at include/gemmi/scaling.hpp:139:22: 2023-09-15T09:38:12,248 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:38:12,249 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:38:12,249 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:38:14,064 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/search.cpp -o build/temp.linux-armv7l-cpython-311/python/search.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:38:51,879 In file included from /usr/include/c++/12/vector:70, 2023-09-15T09:38:51,879 from include/gemmi/neighbor.hpp:9, 2023-09-15T09:38:51,879 from python/search.cpp:3: 2023-09-15T09:38:51,880 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Transform&}; _Tp = gemmi::Transform; _Alloc = std::allocator]’: 2023-09-15T09:38:51,881 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:38:51,881 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:38:51,882 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:38:51,987 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Fractional&}; _Tp = gemmi::Fractional; _Alloc = std::allocator]’: 2023-09-15T09:38:51,987 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:38:52,117 In file included from /usr/include/c++/12/vector:64: 2023-09-15T09:38:52,118 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Fractional; _Alloc = std::allocator]’, 2023-09-15T09:38:52,119 inlined from ‘void gemmi::NeighborSearch::add_site(const gemmi::SmallStructure::Site&, int)’ at include/gemmi/neighbor.hpp:269:21: 2023-09-15T09:38:52,119 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:38:52,120 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:38:52,120 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:38:55,208 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-15T09:38:55,208 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:38:55,209 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:38:55,210 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:39:00,585 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Transform; _Alloc = std::allocator]’, 2023-09-15T09:39:00,586 inlined from ‘void gemmi::NeighborSearch::initialize(gemmi::Model&, const gemmi::UnitCell&, double)’ at include/gemmi/neighbor.hpp:182:20: 2023-09-15T09:39:00,587 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:39:00,587 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:39:00,588 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:39:00,590 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-15T09:39:00,590 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::FTransform; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:39:00,591 inlined from ‘void gemmi::NeighborSearch::initialize(gemmi::Model&, const gemmi::UnitCell&, double)’ at include/gemmi/neighbor.hpp:195:25: 2023-09-15T09:39:00,592 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:39:00,592 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:39:00,593 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:39:18,893 In file included from /usr/include/c++/12/vector:63: 2023-09-15T09:39:18,895 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’: 2023-09-15T09:39:18,895 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:39:18,896 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:39:18,897 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:39:18,898 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:39:18,986 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’: 2023-09-15T09:39:18,987 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:39:18,988 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:39:19,168 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’: 2023-09-15T09:39:19,168 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:39:19,169 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:39:19,294 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; bool _TrivialValueTypes = false]’, 2023-09-15T09:39:19,295 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:39:19,296 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; _Tp = gemmi::Restraints::Angle]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:39:19,296 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:39:19,297 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-15T09:39:19,298 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:39:19,299 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:39:19,299 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:39:19,300 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; bool _TrivialValueTypes = false]’, 2023-09-15T09:39:19,301 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:39:19,302 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; _Tp = gemmi::Restraints::Torsion]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:39:19,302 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:39:19,303 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-15T09:39:19,303 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:39:19,304 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:39:19,304 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:39:19,305 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; bool _TrivialValueTypes = false]’, 2023-09-15T09:39:19,306 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:39:19,306 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; _Tp = gemmi::Restraints::Plane]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:39:19,307 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:39:19,308 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-15T09:39:19,308 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:39:19,309 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:39:19,310 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:39:20,088 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/sf.cpp -o build/temp.linux-armv7l-cpython-311/python/sf.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:39:32,090 In file included from include/gemmi/it92.hpp:16, 2023-09-15T09:39:32,090 from python/sf.cpp:6: 2023-09-15T09:39:32,091 include/gemmi/formfact.hpp: In instantiation of ‘std::pair<_ForwardIterator, _ForwardIterator> gemmi::ExpSum::calculate_with_derivative(Real) const [with int N = 5; Real = double]’: 2023-09-15T09:39:32,091 include/gemmi/dencalc.hpp:19:54: required from ‘double gemmi::determine_cutoff_radius(double, const PrecalExpSum&, double) [with PrecalExpSum = ExpSum<5, double>]’ 2023-09-15T09:39:32,092 include/gemmi/dencalc.hpp:121:35: required from ‘double gemmi::DensityCalculator::estimate_radius(const gemmi::ExpSum&, double) const [with int N = 5; Table = gemmi::IT92; Real = float; typename Table::Coef::coef_type = double; typename Table::Coef = gemmi::GaussianCoef<4, 1, double>]’ 2023-09-15T09:39:32,092 python/sf.cpp:62:36: required from ‘void add_dencalc(pybind11::module&, const char*) [with Table = gemmi::IT92; pybind11::module = pybind11::module_]’ 2023-09-15T09:39:32,093 python/sf.cpp:83:20: required from here 2023-09-15T09:39:32,093 include/gemmi/formfact.hpp:27:24: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 2023-09-15T09:39:32,094 27 | std::pair calculate_with_derivative(Real r) const { 2023-09-15T09:39:32,094 | ^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:39:59,636 In file included from /usr/include/c++/12/functional:64, 2023-09-15T09:39:59,636 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../cast.h:21, 2023-09-15T09:39:59,636 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../attr.h:14, 2023-09-15T09:39:59,637 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/class.h:12, 2023-09-15T09:39:59,638 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h:13, 2023-09-15T09:39:59,639 from python/common.h:3, 2023-09-15T09:39:59,639 from python/sf.cpp:3: 2023-09-15T09:39:59,640 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’, 2023-09-15T09:39:59,641 inlined from ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1844:5, 2023-09-15T09:39:59,641 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2023-09-15T09:39:59,642 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = gemmi::impl_fprim::Point*; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’ at /usr/include/c++/12/bits/stl_algo.h:1932:5, 2023-09-15T09:39:59,642 inlined from ‘void std::sort(_RAIter, _RAIter) [with _RAIter = gemmi::impl_fprim::Point*]’ at /usr/include/c++/12/bits/stl_algo.h:4820:18, 2023-09-15T09:39:59,643 inlined from ‘void gemmi::impl_fprim::cromer(int, double, int, const OrbitalCoef*, double*, double*)’ at include/gemmi/fprime.hpp:161:14: 2023-09-15T09:39:59,644 /usr/include/c++/12/bits/stl_algo.h:1849:32: warning: array subscript 16 is outside array bounds of ‘gemmi::impl_fprim::Point [11]’ [-Warray-bounds] 2023-09-15T09:39:59,645 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2023-09-15T09:39:59,645 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:39:59,646 In file included from python/sf.cpp:10: 2023-09-15T09:39:59,646 include/gemmi/fprime.hpp: In function ‘void gemmi::impl_fprim::cromer(int, double, int, const OrbitalCoef*, double*, double*)’: 2023-09-15T09:39:59,647 include/gemmi/fprime.hpp:153:11: note: at offset 256 into object ‘lndata’ of size 176 2023-09-15T09:39:59,647 153 | Point lndata[11]; 2023-09-15T09:39:59,648 | ^~~~~~ 2023-09-15T09:39:59,992 In file included from /usr/include/c++/12/vector:70, 2023-09-15T09:39:59,993 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../detail/common.h:314, 2023-09-15T09:39:59,993 from /tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/detail/../attr.h:13: 2023-09-15T09:39:59,994 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: 2023-09-15T09:39:59,994 /usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:39:59,995 523 | vector<_Tp, _Alloc>:: 2023-09-15T09:39:59,996 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:40:00,079 In file included from /usr/include/c++/12/vector:64: 2023-09-15T09:40:00,080 In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-15T09:40:00,081 inlined from ‘void gemmi::StructureFactorCalculator::set_stol2_and_scattering_factors(const gemmi::Miller&) [with Table = gemmi::IT92]’ at include/gemmi/sfcalc.hpp:35:31, 2023-09-15T09:40:00,082 inlined from ‘std::complex gemmi::StructureFactorCalculator
::calculate_sf_from_model(const gemmi::Model&, const gemmi::Miller&) [with Table = gemmi::IT92]’ at include/gemmi/sfcalc.hpp:98:37: 2023-09-15T09:40:00,082 /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:40:00,083 1032 | _M_fill_insert(end(), __new_size - size(), __x); 2023-09-15T09:40:00,084 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:40:00,184 In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-15T09:40:00,185 inlined from ‘void gemmi::StructureFactorCalculator
::set_stol2_and_scattering_factors(const gemmi::Miller&) [with Table = gemmi::C4322]’ at include/gemmi/sfcalc.hpp:35:31, 2023-09-15T09:40:00,185 inlined from ‘std::complex gemmi::StructureFactorCalculator
::calculate_sf_from_model(const gemmi::Model&, const gemmi::Miller&) [with Table = gemmi::C4322]’ at include/gemmi/sfcalc.hpp:98:37: 2023-09-15T09:40:00,186 /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:40:00,187 1032 | _M_fill_insert(end(), __new_size - size(), __x); 2023-09-15T09:40:00,187 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:40:00,272 In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-15T09:40:00,273 inlined from ‘void gemmi::StructureFactorCalculator
::set_stol2_and_scattering_factors(const gemmi::Miller&) [with Table = gemmi::C4322]’ at include/gemmi/sfcalc.hpp:35:31, 2023-09-15T09:40:00,274 inlined from ‘std::complex gemmi::StructureFactorCalculator
::calculate_sf_from_small_structure(const gemmi::SmallStructure&, const gemmi::Miller&) [with Table = gemmi::C4322]’ at include/gemmi/sfcalc.hpp:127:37: 2023-09-15T09:40:00,274 /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:40:00,275 1032 | _M_fill_insert(end(), __new_size - size(), __x); 2023-09-15T09:40:00,275 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:40:00,341 In member function ‘void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-09-15T09:40:00,342 inlined from ‘void gemmi::StructureFactorCalculator
::set_stol2_and_scattering_factors(const gemmi::Miller&) [with Table = gemmi::IT92]’ at include/gemmi/sfcalc.hpp:35:31, 2023-09-15T09:40:00,342 inlined from ‘std::complex gemmi::StructureFactorCalculator
::calculate_sf_from_small_structure(const gemmi::SmallStructure&, const gemmi::Miller&) [with Table = gemmi::IT92]’ at include/gemmi/sfcalc.hpp:127:37: 2023-09-15T09:40:00,343 /usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:40:00,343 1032 | _M_fill_insert(end(), __new_size - size(), __x); 2023-09-15T09:40:00,344 | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:40:05,006 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/sym.cpp -o build/temp.linux-armv7l-cpython-311/python/sym.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:40:58,520 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/topo.cpp -o build/temp.linux-armv7l-cpython-311/python/topo.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:41:54,112 In file included from /usr/include/c++/12/string:50, 2023-09-15T09:41:54,113 from include/gemmi/chemcomp.hpp:9, 2023-09-15T09:41:54,113 from include/gemmi/topo.hpp:8, 2023-09-15T09:41:54,114 from python/topo.cpp:3: 2023-09-15T09:41:54,115 /usr/include/c++/12/bits/stl_algobase.h: In function ‘_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’: 2023-09-15T09:41:54,115 /usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:41:54,116 2059 | __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last, 2023-09-15T09:41:54,117 | ^~~~~~~~~ 2023-09-15T09:41:54,118 /usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:41:56,244 In file included from /usr/include/c++/12/algorithm:61, 2023-09-15T09:41:56,244 from include/gemmi/util.hpp:8, 2023-09-15T09:41:56,245 from include/gemmi/cifdoc.hpp:11, 2023-09-15T09:41:56,245 from include/gemmi/chemcomp.hpp:11: 2023-09-15T09:41:56,246 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Val_comp_iter >]’: 2023-09-15T09:41:56,246 /usr/include/c++/12/bits/stl_algo.h:1782:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:41:56,247 1782 | __unguarded_linear_insert(_RandomAccessIterator __last, 2023-09-15T09:41:56,247 | ^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:41:56,372 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: 2023-09-15T09:41:56,372 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:41:56,373 1802 | __insertion_sort(_RandomAccessIterator __first, 2023-09-15T09:41:56,374 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:41:56,374 /usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:41:57,163 In file included from /usr/include/c++/12/bits/stl_algo.h:60: 2023-09-15T09:41:57,163 /usr/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = gemmi::Atom; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: 2023-09-15T09:41:57,164 /usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:41:57,165 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2023-09-15T09:41:57,165 | ^~~~~~~~~~~~~ 2023-09-15T09:42:03,809 In file included from /usr/include/c++/12/vector:70, 2023-09-15T09:42:03,810 from include/gemmi/chemcomp.hpp:10: 2023-09-15T09:42:03,811 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Atom&}; _Tp = gemmi::Atom; _Alloc = std::allocator]’: 2023-09-15T09:42:03,811 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:42:03,812 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:42:03,813 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:03,937 In file included from /usr/include/c++/12/vector:64: 2023-09-15T09:42:03,938 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Atom; _Alloc = std::allocator]’, 2023-09-15T09:42:03,939 inlined from ‘void gemmi::add_hydrogens_without_positions(const ChemComp&, Residue&)’ at include/gemmi/placeh.hpp:40:30: 2023-09-15T09:42:03,939 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:03,940 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:42:03,940 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:42:05,438 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’: 2023-09-15T09:42:05,438 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:42:05,439 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:42:05,440 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:05,822 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Angle&}; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’: 2023-09-15T09:42:05,822 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:42:07,472 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::BondedAtom}; _Tp = gemmi::BondedAtom; _Alloc = std::allocator]’: 2023-09-15T09:42:07,473 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:42:07,699 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::BondedAtom}; _Tp = gemmi::BondedAtom; _Alloc = std::allocator]’, 2023-09-15T09:42:07,700 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::BondedAtom; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:42:07,701 inlined from ‘void gemmi::place_hydrogens(const Atom&, Topo::ResInfo&, const Topo&)’ at include/gemmi/placeh.hpp:151:28: 2023-09-15T09:42:07,701 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:07,702 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:42:07,703 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:12,732 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Bond&}; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’: 2023-09-15T09:42:12,732 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:42:12,733 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:42:12,734 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:13,027 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const gemmi::Restraints::Torsion&}; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’: 2023-09-15T09:42:13,028 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:42:13,960 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:42:13,961 inlined from ‘T& gemmi::impl::add_or_set(std::vector&, typename std::vector::iterator, const T&) [with T = gemmi::Restraints::Bond]’ at include/gemmi/monlib.hpp:356:20, 2023-09-15T09:42:13,962 inlined from ‘T& gemmi::impl::add_or_set(std::vector&, typename std::vector::iterator, const T&) [with T = gemmi::Restraints::Bond]’ at include/gemmi/monlib.hpp:353:4, 2023-09-15T09:42:13,962 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:422:25: 2023-09-15T09:42:13,963 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:13,963 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:42:13,964 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:42:13,965 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’, 2023-09-15T09:42:13,965 inlined from ‘T& gemmi::impl::add_or_set(std::vector&, typename std::vector::iterator, const T&) [with T = gemmi::Restraints::Angle]’ at include/gemmi/monlib.hpp:356:20, 2023-09-15T09:42:13,966 inlined from ‘T& gemmi::impl::add_or_set(std::vector&, typename std::vector::iterator, const T&) [with T = gemmi::Restraints::Angle]’ at include/gemmi/monlib.hpp:353:4, 2023-09-15T09:42:13,966 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:446:25: 2023-09-15T09:42:13,967 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:13,968 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:42:13,968 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:42:13,969 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’, 2023-09-15T09:42:13,970 inlined from ‘T& gemmi::impl::add_or_set(std::vector&, typename std::vector::iterator, const T&) [with T = gemmi::Restraints::Torsion]’ at include/gemmi/monlib.hpp:356:20, 2023-09-15T09:42:13,970 inlined from ‘T& gemmi::impl::add_or_set(std::vector&, typename std::vector::iterator, const T&) [with T = gemmi::Restraints::Torsion]’ at include/gemmi/monlib.hpp:353:4, 2023-09-15T09:42:13,971 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:469:25: 2023-09-15T09:42:13,972 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:13,972 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:42:13,973 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:42:13,974 In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’, 2023-09-15T09:42:13,975 inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::Restraints::get_plane(const std::string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:3877:28, 2023-09-15T09:42:13,976 inlined from ‘std::vector::iterator gemmi::Restraints::get_plane(const std::string&)’ at include/gemmi/chemcomp.hpp:262:24, 2023-09-15T09:42:13,977 inlined from ‘gemmi::Restraints::Plane& gemmi::Restraints::get_or_add_plane(const std::string&)’ at include/gemmi/chemcomp.hpp:267:48, 2023-09-15T09:42:13,977 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:513:64: 2023-09-15T09:42:13,978 /usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:13,979 2112 | return __find_if(__first, __last, __pred, 2023-09-15T09:42:13,980 | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:13,980 2113 | std::__iterator_category(__first)); 2023-09-15T09:42:13,981 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:13,982 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::Restraints::Plane}; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’, 2023-09-15T09:42:13,982 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:42:13,983 inlined from ‘gemmi::Restraints::Plane& gemmi::Restraints::get_or_add_plane(const std::string&)’ at include/gemmi/chemcomp.hpp:270:21, 2023-09-15T09:42:13,984 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:513:64: 2023-09-15T09:42:13,985 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:13,986 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:42:13,986 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:13,987 In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’, 2023-09-15T09:42:13,988 inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::Restraints::get_plane(const std::string&)::]’ at /usr/include/c++/12/bits/stl_algo.h:3877:28, 2023-09-15T09:42:13,989 inlined from ‘std::vector::iterator gemmi::Restraints::get_plane(const std::string&)’ at include/gemmi/chemcomp.hpp:262:24, 2023-09-15T09:42:13,990 inlined from ‘void gemmi::ChemMod::apply_to(gemmi::ChemComp&) const’ at include/gemmi/monlib.hpp:520:40: 2023-09-15T09:42:13,990 /usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:13,991 2112 | return __find_if(__first, __last, __pred, 2023-09-15T09:42:13,992 | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:13,993 2113 | std::__iterator_category(__first)); 2023-09-15T09:42:13,993 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:34,996 In file included from /usr/include/c++/12/vector:63: 2023-09-15T09:42:34,996 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*]’: 2023-09-15T09:42:34,997 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:34,997 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:42:34,998 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:42:34,998 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:35,092 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*; bool _TrivialValueTypes = false]’, 2023-09-15T09:42:35,093 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:42:35,093 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*; _Tp = gemmi::Restraints::Bond]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:42:35,094 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:42:35,094 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-15T09:42:35,095 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:35,096 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:42:35,096 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:35,180 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’: 2023-09-15T09:42:35,181 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:35,182 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:42:35,182 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:42:35,183 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:35,294 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; bool _TrivialValueTypes = false]’, 2023-09-15T09:42:35,294 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:42:35,295 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; _Tp = gemmi::Restraints::Angle]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:42:35,296 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:42:35,296 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-15T09:42:35,297 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:35,297 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:42:35,298 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:35,397 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’: 2023-09-15T09:42:35,398 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:35,399 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:42:35,399 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:42:35,400 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:35,549 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; bool _TrivialValueTypes = false]’, 2023-09-15T09:42:35,549 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:42:35,550 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; _Tp = gemmi::Restraints::Torsion]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:42:35,551 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:42:35,551 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-15T09:42:35,552 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:35,552 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:42:35,553 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:53,220 /usr/include/c++/12/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’: 2023-09-15T09:42:53,220 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:53,221 1908 | __introsort_loop(_RandomAccessIterator __first, 2023-09-15T09:42:53,221 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:42:53,222 /usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:53,224 /usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:53,225 1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2023-09-15T09:42:53,225 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:53,612 /usr/include/c++/12/bits/stl_uninitialized.h: In function ‘_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’: 2023-09-15T09:42:53,612 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:53,613 113 | __do_uninit_copy(_InputIterator __first, _InputIterator __last, 2023-09-15T09:42:53,614 | ^~~~~~~~~~~~~~~~ 2023-09-15T09:42:53,614 /usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:53,719 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; bool _TrivialValueTypes = false]’, 2023-09-15T09:42:53,720 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:42:53,721 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; _Tp = gemmi::Restraints::Plane]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:42:53,721 inlined from ‘std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator >; _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1617:35, 2023-09-15T09:42:53,722 inlined from ‘std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/vector.tcc:232:44: 2023-09-15T09:42:53,722 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:53,723 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:42:53,724 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:54,089 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*; bool _TrivialValueTypes = false]’, 2023-09-15T09:42:54,089 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:42:54,090 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Bond*; _Tp = gemmi::Restraints::Bond]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:42:54,091 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:42:54,092 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-15T09:42:54,092 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:54,093 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:42:54,093 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:54,094 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; bool _TrivialValueTypes = false]’, 2023-09-15T09:42:54,094 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:42:54,095 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Angle*; _Tp = gemmi::Restraints::Angle]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:42:54,096 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Angle; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:42:54,096 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-15T09:42:54,097 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:54,098 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:42:54,098 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:54,099 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; bool _TrivialValueTypes = false]’, 2023-09-15T09:42:54,100 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:42:54,100 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Torsion*; _Tp = gemmi::Restraints::Torsion]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:42:54,101 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Torsion; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:42:54,102 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-15T09:42:54,102 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:54,103 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:42:54,103 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:54,104 In static member function ‘static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; bool _TrivialValueTypes = false]’, 2023-09-15T09:42:54,105 inlined from ‘_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*]’ at /usr/include/c++/12/bits/stl_uninitialized.h:185:15, 2023-09-15T09:42:54,105 inlined from ‘_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator >; _ForwardIterator = gemmi::Restraints::Plane*; _Tp = gemmi::Restraints::Plane]’ at /usr/include/c++/12/bits/stl_uninitialized.h:372:37, 2023-09-15T09:42:54,106 inlined from ‘std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = gemmi::Restraints::Plane; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:601:31, 2023-09-15T09:42:54,106 inlined from ‘gemmi::Restraints::Restraints(const gemmi::Restraints&)’ at include/gemmi/chemcomp.hpp:25:8: 2023-09-15T09:42:54,107 /usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:54,108 137 | { return std::__do_uninit_copy(__first, __last, __result); } 2023-09-15T09:42:54,108 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:54,765 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = gemmi::Restraints::Bond; _Alloc = std::allocator]’, 2023-09-15T09:42:54,766 inlined from ‘void gemmi::Topo::initialize_refmac_topology(const gemmi::Structure&, gemmi::Model&, gemmi::MonLib&, bool)’ at include/gemmi/topo.hpp:490:28: 2023-09-15T09:42:54,766 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:54,767 1287 | _M_realloc_insert(end(), __x); 2023-09-15T09:42:54,768 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-15T09:42:55,525 In function ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’, 2023-09-15T09:42:55,531 inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = gemmi::prepare_topology(Structure&, MonLib&, size_t, HydrogenChange, bool, bool, bool)::]’ at /usr/include/c++/12/bits/stl_algo.h:4853:18, 2023-09-15T09:42:55,532 inlined from ‘std::unique_ptr gemmi::prepare_topology(Structure&, MonLib&, size_t, HydrogenChange, bool, bool, bool)’ at include/gemmi/placeh.hpp:400:20: 2023-09-15T09:42:55,533 /usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:55,533 1937 | std::__introsort_loop(__first, __last, 2023-09-15T09:42:55,534 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2023-09-15T09:42:55,534 1938 | std::__lg(__last - __first) * 2, 2023-09-15T09:42:55,535 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:55,535 1939 | __comp); 2023-09-15T09:42:55,535 | ~~~~~~~ 2023-09-15T09:42:55,536 In function ‘void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’, 2023-09-15T09:42:55,536 inlined from ‘void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter >]’ at /usr/include/c++/12/bits/stl_algo.h:1940:31, 2023-09-15T09:42:55,537 inlined from ‘void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = gemmi::prepare_topology(Structure&, MonLib&, size_t, HydrogenChange, bool, bool, bool)::]’ at /usr/include/c++/12/bits/stl_algo.h:4853:18, 2023-09-15T09:42:55,538 inlined from ‘std::unique_ptr gemmi::prepare_topology(Structure&, MonLib&, size_t, HydrogenChange, bool, bool, bool)’ at include/gemmi/placeh.hpp:400:20: 2023-09-15T09:42:55,538 /usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:55,539 1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2023-09-15T09:42:55,539 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:42:55,540 /usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:42:55,540 1854 | std::__insertion_sort(__first, __last, __comp); 2023-09-15T09:42:55,541 | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:43:00,229 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/unitcell.cpp -o build/temp.linux-armv7l-cpython-311/python/unitcell.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:43:39,631 In file included from /usr/include/c++/12/vector:70, 2023-09-15T09:43:39,631 from include/gemmi/unitcell.hpp:10, 2023-09-15T09:43:39,632 from python/unitcell.cpp:3: 2023-09-15T09:43:39,632 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’: 2023-09-15T09:43:39,633 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-09-15T09:43:39,633 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:43:39,634 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:43:39,763 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {gemmi::FTransform}; _Tp = gemmi::FTransform; _Alloc = std::allocator]’, 2023-09-15T09:43:39,764 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = gemmi::FTransform; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:43:39,764 inlined from ‘gemmi::UnitCell gemmi::UnitCell::changed_basis_backward(const gemmi::Op&, bool)’ at include/gemmi/unitcell.hpp:278:34: 2023-09-15T09:43:39,765 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:43:39,765 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:43:39,766 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:43:52,972 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2023-09-15T09:43:52,972 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2023-09-15T09:43:52,973 439 | vector<_Tp, _Alloc>:: 2023-09-15T09:43:52,973 | ^~~~~~~~~~~~~~~~~~~ 2023-09-15T09:43:53,019 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, 2023-09-15T09:43:53,020 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-09-15T09:43:53,021 inlined from ‘add_smat33(pybind11::module&, const char*)::)>’ at python/unitcell.cpp:70:23: 2023-09-15T09:43:53,021 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2023-09-15T09:43:53,022 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-09-15T09:43:53,023 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:44:10,606 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DVERSION_INFO=\"0.5.0\" -Ithird_party/zlib -Iinclude -Ithird_party -I/tmp/pip-wheel-5n6vmon6/gemmi_7a1142deee424f9282a477f648ee3450/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include -I/usr/include/python3.11 -c python/write.cpp -o build/temp.linux-armv7l-cpython-311/python/write.o -std=c++17 -fvisibility=hidden -g0 2023-09-15T09:44:37,066 In file included from /usr/include/c++/12/string:50, 2023-09-15T09:44:37,067 from include/gemmi/sprintf.hpp:32, 2023-09-15T09:44:37,067 from python/write.cpp:4: 2023-09-15T09:44:37,068 /usr/include/c++/12/bits/stl_algobase.h: In function ‘_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’: 2023-09-15T09:44:37,069 /usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:44:37,070 2059 | __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last, 2023-09-15T09:44:37,070 | ^~~~~~~~~ 2023-09-15T09:44:37,071 /usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:45:09,925 In function ‘_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator >; _Predicate = __gnu_cxx::__ops::_Iter_pred >]’, 2023-09-15T09:45:09,926 inlined from ‘_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::update_mmcif_block(const Structure&, cif::Block&, MmcifOutputGroups)::]’ at /usr/include/c++/12/bits/stl_algo.h:3877:28, 2023-09-15T09:45:09,927 inlined from ‘bool std::none_of(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::update_mmcif_block(const Structure&, cif::Block&, MmcifOutputGroups)::]’ at /usr/include/c++/12/bits/stl_algo.h:474:47, 2023-09-15T09:45:09,927 inlined from ‘bool std::any_of(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator >; _Predicate = gemmi::update_mmcif_block(const Structure&, cif::Block&, MmcifOutputGroups)::]’ at /usr/include/c++/12/bits/stl_algo.h:493:27, 2023-09-15T09:45:09,928 inlined from ‘void gemmi::update_mmcif_block(const Structure&, cif::Block&, MmcifOutputGroups)’ at include/gemmi/to_mmcif.hpp:643:20: 2023-09-15T09:45:09,929 /usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-09-15T09:45:09,930 2112 | return __find_if(__first, __last, __pred, 2023-09-15T09:45:09,930 | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:45:09,931 2113 | std::__iterator_category(__first)); 2023-09-15T09:45:09,931 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-09-15T09:45:21,721 arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/python/align.o build/temp.linux-armv7l-cpython-311/python/ccp4.o build/temp.linux-armv7l-cpython-311/python/chemcomp.o build/temp.linux-armv7l-cpython-311/python/cif.o build/temp.linux-armv7l-cpython-311/python/custom.o build/temp.linux-armv7l-cpython-311/python/elem.o build/temp.linux-armv7l-cpython-311/python/gemmi.o build/temp.linux-armv7l-cpython-311/python/grid.o build/temp.linux-armv7l-cpython-311/python/hkl.o build/temp.linux-armv7l-cpython-311/python/meta.o build/temp.linux-armv7l-cpython-311/python/mol.o build/temp.linux-armv7l-cpython-311/python/monlib.o build/temp.linux-armv7l-cpython-311/python/mtz.o build/temp.linux-armv7l-cpython-311/python/read.o build/temp.linux-armv7l-cpython-311/python/recgrid.o build/temp.linux-armv7l-cpython-311/python/scaling.o build/temp.linux-armv7l-cpython-311/python/search.o build/temp.linux-armv7l-cpython-311/python/sf.o build/temp.linux-armv7l-cpython-311/python/sym.o build/temp.linux-armv7l-cpython-311/python/topo.o build/temp.linux-armv7l-cpython-311/python/unitcell.o build/temp.linux-armv7l-cpython-311/python/write.o -L/usr/lib/arm-linux-gnueabihf -Lbuild/temp.linux-armv7l-cpython-311 -lgemmi_zlib -lgemmi_zlib -o build/lib.linux-armv7l-cpython-311/gemmi.cpython-311-arm-linux-gnueabihf.so -Wl,-s 2023-09-15T09:45:23,876 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-09-15T09:45:23,876 !! 2023-09-15T09:45:23,877 ******************************************************************************** 2023-09-15T09:45:23,878 Please avoid running ``setup.py`` directly. 2023-09-15T09:45:23,878 Instead, use pypa/build, pypa/installer or other 2023-09-15T09:45:23,879 standards-based tools. 2023-09-15T09:45:23,880 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-09-15T09:45:23,880 ******************************************************************************** 2023-09-15T09:45:23,881 !! 2023-09-15T09:45:23,881 self.initialize_options() 2023-09-15T09:45:23,904 installing to build/bdist.linux-armv7l/wheel 2023-09-15T09:45:23,904 running install 2023-09-15T09:45:23,928 running install_lib 2023-09-15T09:45:23,955 creating build/bdist.linux-armv7l 2023-09-15T09:45:23,956 creating build/bdist.linux-armv7l/wheel 2023-09-15T09:45:23,956 copying build/lib.linux-armv7l-cpython-311/gemmi.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2023-09-15T09:45:24,062 creating build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,063 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/hello.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,065 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/cif_i_sigi.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,066 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/ccd_subgraph.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,068 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/simple_search.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,070 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/col_order.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,071 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/maskcheck.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,073 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/ccd_gi.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,075 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/aafreq.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,077 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/monomers.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,079 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/long_geom.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,081 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/map2mtz.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,082 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/__main__.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,084 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/__init__.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,085 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/merge_mtz_mmcif.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,087 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/from_json.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,089 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/mtz_i_sigi.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,091 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/maskdiff.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,092 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/rama_gather.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,094 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/rama_plot.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,095 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/weight.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,097 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/mtrix_iso.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,099 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/patterson_slice.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,100 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/multiproc.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,102 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/matthews.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,104 copying build/lib.linux-armv7l-cpython-311/gemmi-examples/sub_ccd.py -> build/bdist.linux-armv7l/wheel/gemmi-examples 2023-09-15T09:45:24,106 running install_egg_info 2023-09-15T09:45:24,157 running egg_info 2023-09-15T09:45:24,182 writing gemmi.egg-info/PKG-INFO 2023-09-15T09:45:24,185 writing dependency_links to gemmi.egg-info/dependency_links.txt 2023-09-15T09:45:24,187 writing top-level names to gemmi.egg-info/top_level.txt 2023-09-15T09:45:24,223 reading manifest file 'gemmi.egg-info/SOURCES.txt' 2023-09-15T09:45:24,261 reading manifest template 'MANIFEST.in' 2023-09-15T09:45:24,351 adding license file 'LICENSE.txt' 2023-09-15T09:45:24,368 writing manifest file 'gemmi.egg-info/SOURCES.txt' 2023-09-15T09:45:24,369 Copying gemmi.egg-info to build/bdist.linux-armv7l/wheel/gemmi-0.5.0-py3.11.egg-info 2023-09-15T09:45:24,379 running install_scripts 2023-09-15T09:45:24,432 creating build/bdist.linux-armv7l/wheel/gemmi-0.5.0.dist-info/WHEEL 2023-09-15T09:45:24,434 creating '/tmp/pip-wheel-j7mwzb5m/gemmi-0.5.0-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-15T09:45:25,614 adding 'gemmi.cpython-311-arm-linux-gnueabihf.so' 2023-09-15T09:45:25,669 adding 'gemmi-examples/__init__.py' 2023-09-15T09:45:25,670 adding 'gemmi-examples/__main__.py' 2023-09-15T09:45:25,672 adding 'gemmi-examples/aafreq.py' 2023-09-15T09:45:25,673 adding 'gemmi-examples/ccd_gi.py' 2023-09-15T09:45:25,674 adding 'gemmi-examples/ccd_subgraph.py' 2023-09-15T09:45:25,676 adding 'gemmi-examples/cif_i_sigi.py' 2023-09-15T09:45:25,677 adding 'gemmi-examples/col_order.py' 2023-09-15T09:45:25,679 adding 'gemmi-examples/from_json.py' 2023-09-15T09:45:25,680 adding 'gemmi-examples/hello.py' 2023-09-15T09:45:25,681 adding 'gemmi-examples/long_geom.py' 2023-09-15T09:45:25,682 adding 'gemmi-examples/map2mtz.py' 2023-09-15T09:45:25,684 adding 'gemmi-examples/maskcheck.py' 2023-09-15T09:45:25,685 adding 'gemmi-examples/maskdiff.py' 2023-09-15T09:45:25,686 adding 'gemmi-examples/matthews.py' 2023-09-15T09:45:25,688 adding 'gemmi-examples/merge_mtz_mmcif.py' 2023-09-15T09:45:25,689 adding 'gemmi-examples/monomers.py' 2023-09-15T09:45:25,690 adding 'gemmi-examples/mtrix_iso.py' 2023-09-15T09:45:25,692 adding 'gemmi-examples/mtz_i_sigi.py' 2023-09-15T09:45:25,693 adding 'gemmi-examples/multiproc.py' 2023-09-15T09:45:25,694 adding 'gemmi-examples/patterson_slice.py' 2023-09-15T09:45:25,695 adding 'gemmi-examples/rama_gather.py' 2023-09-15T09:45:25,696 adding 'gemmi-examples/rama_plot.py' 2023-09-15T09:45:25,698 adding 'gemmi-examples/simple_search.py' 2023-09-15T09:45:25,699 adding 'gemmi-examples/sub_ccd.py' 2023-09-15T09:45:25,700 adding 'gemmi-examples/weight.py' 2023-09-15T09:45:25,703 adding 'gemmi-0.5.0.dist-info/LICENSE.txt' 2023-09-15T09:45:25,704 adding 'gemmi-0.5.0.dist-info/METADATA' 2023-09-15T09:45:25,705 adding 'gemmi-0.5.0.dist-info/WHEEL' 2023-09-15T09:45:25,705 adding 'gemmi-0.5.0.dist-info/top_level.txt' 2023-09-15T09:45:25,707 adding 'gemmi-0.5.0.dist-info/RECORD' 2023-09-15T09:45:25,733 removing build/bdist.linux-armv7l/wheel 2023-09-15T09:45:25,900 Building wheel for gemmi (setup.py): finished with status 'done' 2023-09-15T09:45:25,933 Created wheel for gemmi: filename=gemmi-0.5.0-cp311-cp311-linux_armv7l.whl size=2543904 sha256=2e4d2ea5dc777de53287d968d4098868cd38dd09723620266f932d8333e5404e 2023-09-15T09:45:25,934 Stored in directory: /tmp/pip-ephem-wheel-cache-0ttr_6bb/wheels/54/3c/08/236bae47522f65a0a64af25b3cf686745288431a50454dbc23 2023-09-15T09:45:25,945 Successfully built gemmi 2023-09-15T09:45:26,008 Removed build tracker: '/tmp/pip-build-tracker-ss4zf_6h'