2023-09-16T03:17:57,135 Created temporary directory: /tmp/pip-build-tracker-gdmz8_o6 2023-09-16T03:17:57,136 Initialized build tracking at /tmp/pip-build-tracker-gdmz8_o6 2023-09-16T03:17:57,137 Created build tracker: /tmp/pip-build-tracker-gdmz8_o6 2023-09-16T03:17:57,137 Entered build tracker: /tmp/pip-build-tracker-gdmz8_o6 2023-09-16T03:17:57,138 Created temporary directory: /tmp/pip-wheel-vvdc70mi 2023-09-16T03:17:57,141 Created temporary directory: /tmp/pip-ephem-wheel-cache-j3o9oaww 2023-09-16T03:17:57,163 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-16T03:17:57,166 2 location(s) to search for versions of igv-jupyter: 2023-09-16T03:17:57,166 * https://pypi.org/simple/igv-jupyter/ 2023-09-16T03:17:57,166 * https://www.piwheels.org/simple/igv-jupyter/ 2023-09-16T03:17:57,167 Fetching project page and analyzing links: https://pypi.org/simple/igv-jupyter/ 2023-09-16T03:17:57,168 Getting page https://pypi.org/simple/igv-jupyter/ 2023-09-16T03:17:57,169 Found index url https://pypi.org/simple/ 2023-09-16T03:17:57,385 Fetched page https://pypi.org/simple/igv-jupyter/ as application/vnd.pypi.simple.v1+json 2023-09-16T03:17:57,390 Found link https://files.pythonhosted.org/packages/c6/a4/11e043b8c8b09c72009785995d1911e8a04c9879cdbce242b01f1af439c6/igv-jupyter-0.9.7.tar.gz (from https://pypi.org/simple/igv-jupyter/), version: 0.9.7 2023-09-16T03:17:57,391 Skipping link: No binaries permitted for igv-jupyter: https://files.pythonhosted.org/packages/fc/26/cbbfa5adec59abf52392f417b238994a7f3978c2442f7b405a5b720c6beb/igv_jupyter-0.9.7-py3-none-any.whl (from https://pypi.org/simple/igv-jupyter/) 2023-09-16T03:17:57,391 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/fb/c0/8dacc3acf38db5c8644acea47697b5b27e7fd75c375528d143d783df4993/igv_jupyter-0.9.7-py3.7.egg (from https://pypi.org/simple/igv-jupyter/) 2023-09-16T03:17:57,392 Found link https://files.pythonhosted.org/packages/91/58/3dd69e9059e82e37ced3e24ca8d5aeaa47da36e4b5beb7dc31c374a88567/igv-jupyter-0.9.8.tar.gz (from https://pypi.org/simple/igv-jupyter/), version: 0.9.8 2023-09-16T03:17:57,392 Skipping link: No binaries permitted for igv-jupyter: https://files.pythonhosted.org/packages/fa/79/b698ff2bcfb5f456be04a46f65a3732c484adf8e66a606f00448c0e308a3/igv_jupyter-0.9.8-py3-none-any.whl (from https://pypi.org/simple/igv-jupyter/) 2023-09-16T03:17:57,393 Found link https://files.pythonhosted.org/packages/d3/83/7974d7fd9924a2c2d60828f8682361ec68c85009f9f9496a3d11952229fc/igv-jupyter-0.10.0b0.tar.gz (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6), version: 0.10.0b0 2023-09-16T03:17:57,394 Skipping link: No binaries permitted for igv-jupyter: https://files.pythonhosted.org/packages/31/f2/00164962df4a17d4e7ba4643cd2913285556b76dfdecd839c33943eff2e5/igv_jupyter-0.10.0b0-py3-none-any.whl (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6) 2023-09-16T03:17:57,395 Found link https://files.pythonhosted.org/packages/be/55/50bc9c86de202d92327e955ec3964c30eb966f60575584cd855a1275a815/igv-jupyter-0.10.0.tar.gz (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6), version: 0.10.0 2023-09-16T03:17:57,396 Skipping link: No binaries permitted for igv-jupyter: https://files.pythonhosted.org/packages/0b/a4/669df50773e33e19a5a2f68e8dbaaf20ed186f5537e4c2c78039cf3e8ff9/igv_jupyter-0.10.0-py3-none-any.whl (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6) 2023-09-16T03:17:57,397 Found link https://files.pythonhosted.org/packages/98/ac/d8a3e36f81691db629f222fcceaa27f5802a5ed6b15a7508e84aef8a4459/igv-jupyter-0.10.1.tar.gz (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6), version: 0.10.1 2023-09-16T03:17:57,398 Skipping link: No binaries permitted for igv-jupyter: https://files.pythonhosted.org/packages/88/06/686839f6b3017779cebdbf47891dc7683993fa0b8336740027e6ef19bd9c/igv_jupyter-0.10.1-py3-none-any.whl (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6) 2023-09-16T03:17:57,399 Found link https://files.pythonhosted.org/packages/f0/ed/f43038b632d4673e5562ed410abcf331509603ad407629c1dde1fe602c69/igv-jupyter-0.10.2.tar.gz (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6), version: 0.10.2 2023-09-16T03:17:57,399 Skipping link: No binaries permitted for igv-jupyter: https://files.pythonhosted.org/packages/18/1e/c2910237c01fb78ce1fb72539f6140a7ecfa580b5e9f3c2c39b55fd41c09/igv_jupyter-0.10.2-py3-none-any.whl (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6) 2023-09-16T03:17:57,401 Found link https://files.pythonhosted.org/packages/ae/2b/b1ac690c8e16283decfdc6f2c8e433c0a9d7cfcfd1054fb4117245cad4f0/igv-jupyter-0.10.3.tar.gz (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6), version: 0.10.3 2023-09-16T03:17:57,401 Skipping link: No binaries permitted for igv-jupyter: https://files.pythonhosted.org/packages/3b/37/238c54c314068aea1b26b40b5edf3abe8ed093b901df74e4abf32e994660/igv_jupyter-0.10.3-py3-none-any.whl (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6) 2023-09-16T03:17:57,402 Found link https://files.pythonhosted.org/packages/ff/56/7223b22dbea919dd74457566f75e6ba25cc083fe506362af09a8703c7ba4/igv-jupyter-0.10.4.tar.gz (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6), version: 0.10.4 2023-09-16T03:17:57,403 Skipping link: No binaries permitted for igv-jupyter: https://files.pythonhosted.org/packages/36/8d/e741b6eff2aeea169509a257c3b392e638a1e5737bbf4a7ba6d4160af7ae/igv_jupyter-0.10.4-py3-none-any.whl (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6) 2023-09-16T03:17:57,404 Found link https://files.pythonhosted.org/packages/30/36/19353345fea4399435ea1542cfaae1a9658161128cb6e47d294bb25f9638/igv-jupyter-1.0.0.tar.gz (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6), version: 1.0.0 2023-09-16T03:17:57,404 Skipping link: No binaries permitted for igv-jupyter: https://files.pythonhosted.org/packages/bd/08/863a15e3395a689ff2d2e33d042965c4d25f8ee6472e41068e41dcf32b34/igv_jupyter-1.0.0-py3-none-any.whl (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6) 2023-09-16T03:17:57,405 Found link https://files.pythonhosted.org/packages/69/40/7e0833b3027a623ca3c98ca7b3291f80e3425562afeb659e03c374e63e72/igv-jupyter-2.0.1.tar.gz (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6), version: 2.0.1 2023-09-16T03:17:57,406 Skipping link: No binaries permitted for igv-jupyter: https://files.pythonhosted.org/packages/22/2e/588faeb2b707028da1257727643da2ef53e745f86a881a874add3535db53/igv_jupyter-2.0.1-py3-none-any.whl (from https://pypi.org/simple/igv-jupyter/) (requires-python:>=3.6) 2023-09-16T03:17:57,406 Fetching project page and analyzing links: https://www.piwheels.org/simple/igv-jupyter/ 2023-09-16T03:17:57,407 Getting page https://www.piwheels.org/simple/igv-jupyter/ 2023-09-16T03:17:57,408 Found index url https://www.piwheels.org/simple/ 2023-09-16T03:18:02,053 Fetched page https://www.piwheels.org/simple/igv-jupyter/ as text/html 2023-09-16T03:18:02,059 Skipping link: No binaries permitted for igv-jupyter: https://www.piwheels.org/simple/igv-jupyter/igv_jupyter-2.0.1-py3-none-any.whl#sha256=4c673021a337daf1c4ceed700441715390c1c9779c97965d8606fe7c92193de5 (from https://www.piwheels.org/simple/igv-jupyter/) (requires-python:>=3.6) 2023-09-16T03:18:02,060 Skipping link: No binaries permitted for igv-jupyter: https://www.piwheels.org/simple/igv-jupyter/igv_jupyter-0.10.1-py3-none-any.whl#sha256=93417db5d43b7ed815f4868fe3d03a19b338e7341ed9513fd83d0d1cdfc9164e (from https://www.piwheels.org/simple/igv-jupyter/) (requires-python:>=3.6) 2023-09-16T03:18:02,061 Skipping link: No binaries permitted for igv-jupyter: https://www.piwheels.org/simple/igv-jupyter/igv_jupyter-0.10.0-py3-none-any.whl#sha256=30ff508bc60c2ef973e22266aa8e225c0ff7b9daee1c0f6de028cb4946e968bd (from https://www.piwheels.org/simple/igv-jupyter/) (requires-python:>=3.6) 2023-09-16T03:18:02,062 Skipping link: No binaries permitted for igv-jupyter: https://www.piwheels.org/simple/igv-jupyter/igv_jupyter-0.10.0b0-py3-none-any.whl#sha256=e8e3b6d652f72d2fb0a0335194d042da78887fa4374873e28338e5ac970e96bc (from https://www.piwheels.org/simple/igv-jupyter/) (requires-python:>=3.6) 2023-09-16T03:18:02,063 Skipping link: No binaries permitted for igv-jupyter: https://www.piwheels.org/simple/igv-jupyter/igv_jupyter-0.9.8-py3-none-any.whl#sha256=49b8f3567353861c9697dd51ed4e82ce520507c376e5b71074ade0272cd096d7 (from https://www.piwheels.org/simple/igv-jupyter/) 2023-09-16T03:18:02,064 Skipping link: No binaries permitted for igv-jupyter: https://www.piwheels.org/simple/igv-jupyter/igv_jupyter-0.9.7-py3-none-any.whl#sha256=6d6a70ffee2c2d7ec7c317619349f211b02cbfe989c3539781c857f4361e71bb (from https://www.piwheels.org/simple/igv-jupyter/) 2023-09-16T03:18:02,065 Skipping link: not a file: https://www.piwheels.org/simple/igv-jupyter/ 2023-09-16T03:18:02,065 Skipping link: not a file: https://pypi.org/simple/igv-jupyter/ 2023-09-16T03:18:02,105 Given no hashes to check 1 links for project 'igv-jupyter': discarding no candidates 2023-09-16T03:18:02,131 Collecting igv-jupyter==1.0.0 2023-09-16T03:18:02,134 Created temporary directory: /tmp/pip-unpack-jsq0tx7p 2023-09-16T03:18:02,379 Downloading igv-jupyter-1.0.0.tar.gz (3.5 MB) 2023-09-16T03:18:03,802 Added igv-jupyter==1.0.0 from https://files.pythonhosted.org/packages/30/36/19353345fea4399435ea1542cfaae1a9658161128cb6e47d294bb25f9638/igv-jupyter-1.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-gdmz8_o6' 2023-09-16T03:18:03,810 Created temporary directory: /tmp/pip-build-env-o3zcmxqk 2023-09-16T03:18:03,814 Installing build dependencies: started 2023-09-16T03:18:03,815 Running command pip subprocess to install build dependencies 2023-09-16T03:18:04,950 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-16T03:18:05,454 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-16T03:18:09,642 Collecting ipywidgets>=7.0.0 2023-09-16T03:18:09,643 Obtaining dependency information for ipywidgets>=7.0.0 from https://files.pythonhosted.org/packages/4a/0e/57ed498fafbc60419a9332d872e929879ceba2d73cb11d284d7112472b3e/ipywidgets-8.1.1-py3-none-any.whl.metadata 2023-09-16T03:18:10,121 Downloading ipywidgets-8.1.1-py3-none-any.whl.metadata (2.4 kB) 2023-09-16T03:18:15,861 Collecting jupyter_packaging~=0.7.9 2023-09-16T03:18:15,880 Using cached https://www.piwheels.org/simple/jupyter-packaging/jupyter_packaging-0.7.12-py2.py3-none-any.whl (10 kB) 2023-09-16T03:18:22,634 Collecting jupyterlab~=3.0 2023-09-16T03:18:28,887 Using cached https://www.piwheels.org/simple/jupyterlab/jupyterlab-3.6.5-py3-none-any.whl (8.9 MB) 2023-09-16T03:18:33,713 Collecting setuptools>=40.8.0 2023-09-16T03:18:33,714 Obtaining dependency information for setuptools>=40.8.0 from https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl.metadata 2023-09-16T03:18:33,721 Using cached setuptools-68.2.2-py3-none-any.whl.metadata (6.3 kB) 2023-09-16T03:18:38,634 Collecting wheel 2023-09-16T03:18:38,659 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-09-16T03:18:38,764 Collecting comm>=0.1.3 (from ipywidgets>=7.0.0) 2023-09-16T03:18:38,788 Using cached https://www.piwheels.org/simple/comm/comm-0.1.4-py3-none-any.whl (6.6 kB) 2023-09-16T03:18:39,146 Collecting ipython>=6.1.0 (from ipywidgets>=7.0.0) 2023-09-16T03:18:44,202 Using cached https://www.piwheels.org/simple/ipython/ipython-8.15.0-py3-none-any.whl (806 kB) 2023-09-16T03:18:48,891 Collecting traitlets>=4.3.1 (from ipywidgets>=7.0.0) 2023-09-16T03:18:48,893 Obtaining dependency information for traitlets>=4.3.1 from https://files.pythonhosted.org/packages/fb/00/78472b256929614443c3fa3be31ee60777e5a9e3c6770d8d934154aa2cab/traitlets-5.10.0-py3-none-any.whl.metadata 2023-09-16T03:18:48,905 Using cached traitlets-5.10.0-py3-none-any.whl.metadata (10 kB) 2023-09-16T03:18:49,249 Collecting widgetsnbextension~=4.0.9 (from ipywidgets>=7.0.0) 2023-09-16T03:18:49,250 Obtaining dependency information for widgetsnbextension~=4.0.9 from https://files.pythonhosted.org/packages/29/03/107d96077c4befed191f7ad1a12c7b52a8f9d2778a5836d59f9855c105f6/widgetsnbextension-4.0.9-py3-none-any.whl.metadata 2023-09-16T03:18:49,260 Downloading widgetsnbextension-4.0.9-py3-none-any.whl.metadata (1.6 kB) 2023-09-16T03:18:49,505 Collecting jupyterlab-widgets~=3.0.9 (from ipywidgets>=7.0.0) 2023-09-16T03:18:49,506 Obtaining dependency information for jupyterlab-widgets~=3.0.9 from https://files.pythonhosted.org/packages/e8/05/0ebab152288693b5ec7b339aab857362947031143b282853b4c2dd4b5b40/jupyterlab_widgets-3.0.9-py3-none-any.whl.metadata 2023-09-16T03:18:49,517 Downloading jupyterlab_widgets-3.0.9-py3-none-any.whl.metadata (4.1 kB) 2023-09-16T03:18:49,688 Collecting packaging (from jupyter_packaging~=0.7.9) 2023-09-16T03:18:49,703 Using cached https://www.piwheels.org/simple/packaging/packaging-23.1-py3-none-any.whl (48 kB) 2023-09-16T03:18:50,227 Collecting tornado>=6.1.0 (from jupyterlab~=3.0) 2023-09-16T03:18:50,275 Using cached https://www.piwheels.org/simple/tornado/tornado-6.3.3-cp38-abi3-linux_armv7l.whl (426 kB) 2023-09-16T03:18:50,559 Collecting jupyter-core (from jupyterlab~=3.0) 2023-09-16T03:18:50,584 Using cached https://www.piwheels.org/simple/jupyter-core/jupyter_core-5.3.1-py3-none-any.whl (93 kB) 2023-09-16T03:18:50,879 Collecting jupyterlab-server~=2.19 (from jupyterlab~=3.0) 2023-09-16T03:18:50,880 Obtaining dependency information for jupyterlab-server~=2.19 from https://files.pythonhosted.org/packages/96/cd/cdabe44549d60e0967904f0bdd9e3756b521112317612a3997eb2fda9181/jupyterlab_server-2.25.0-py3-none-any.whl.metadata 2023-09-16T03:18:50,890 Using cached jupyterlab_server-2.25.0-py3-none-any.whl.metadata (5.9 kB) 2023-09-16T03:18:51,235 Collecting jupyter-server<3,>=1.16.0 (from jupyterlab~=3.0) 2023-09-16T03:18:51,280 Using cached https://www.piwheels.org/simple/jupyter-server/jupyter_server-2.7.3-py3-none-any.whl (375 kB) 2023-09-16T03:18:51,450 Collecting jupyter-ydoc~=0.2.4 (from jupyterlab~=3.0) 2023-09-16T03:18:51,468 Using cached https://www.piwheels.org/simple/jupyter-ydoc/jupyter_ydoc-0.2.5-py3-none-any.whl (6.2 kB) 2023-09-16T03:18:51,578 Collecting jupyter-server-ydoc~=0.8.0 (from jupyterlab~=3.0) 2023-09-16T03:18:51,596 Using cached https://www.piwheels.org/simple/jupyter-server-ydoc/jupyter_server_ydoc-0.8.0-py3-none-any.whl (11 kB) 2023-09-16T03:18:51,753 Collecting nbclassic (from jupyterlab~=3.0) 2023-09-16T03:18:52,467 Using cached https://www.piwheels.org/simple/nbclassic/nbclassic-1.0.0-py3-none-any.whl (10.0 MB) 2023-09-16T03:18:53,059 Collecting notebook<7 (from jupyterlab~=3.0) 2023-09-16T03:18:53,116 Using cached https://www.piwheels.org/simple/notebook/notebook-6.5.5-py3-none-any.whl (529 kB) 2023-09-16T03:18:53,270 Collecting jinja2>=2.1 (from jupyterlab~=3.0) 2023-09-16T03:18:53,288 Using cached https://www.piwheels.org/simple/jinja2/Jinja2-3.1.2-py3-none-any.whl (133 kB) 2023-09-16T03:18:53,752 Collecting backcall (from ipython>=6.1.0->ipywidgets>=7.0.0) 2023-09-16T03:18:53,769 Using cached https://www.piwheels.org/simple/backcall/backcall-0.2.0-py2.py3-none-any.whl (11 kB) 2023-09-16T03:18:53,878 Collecting decorator (from 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Using cached https://www.piwheels.org/simple/psutil/psutil-5.9.5-cp39-abi3-linux_armv7l.whl (276 kB) 2023-09-16T03:19:26,123 Collecting executing>=1.2.0 (from stack-data->ipython>=6.1.0->ipywidgets>=7.0.0) 2023-09-16T03:19:26,142 Using cached https://www.piwheels.org/simple/executing/executing-1.2.0-py2.py3-none-any.whl (24 kB) 2023-09-16T03:19:26,247 Collecting asttokens>=2.1.0 (from stack-data->ipython>=6.1.0->ipywidgets>=7.0.0) 2023-09-16T03:19:26,265 Using cached https://www.piwheels.org/simple/asttokens/asttokens-2.4.0-py2.py3-none-any.whl (27 kB) 2023-09-16T03:19:26,327 Collecting pure-eval (from stack-data->ipython>=6.1.0->ipywidgets>=7.0.0) 2023-09-16T03:19:26,342 Using cached https://www.piwheels.org/simple/pure-eval/pure_eval-0.2.2-py3-none-any.whl (11 kB) 2023-09-16T03:19:26,660 Collecting six>=1.12.0 (from asttokens>=2.1.0->stack-data->ipython>=6.1.0->ipywidgets>=7.0.0) 2023-09-16T03:19:26,673 Using cached https://www.piwheels.org/simple/six/six-1.16.0-py2.py3-none-any.whl (11 kB) 2023-09-16T03:19:26,890 Collecting webencodings (from bleach!=5.0.0->nbconvert>=6.4.4->jupyter-server<3,>=1.16.0->jupyterlab~=3.0) 2023-09-16T03:19:27,421 Using cached https://www.piwheels.org/simple/webencodings/webencodings-0.5.1-py2.py3-none-any.whl (11 kB) 2023-09-16T03:19:27,971 Collecting fqdn (from jsonschema>=4.18.0->jupyterlab-server~=2.19->jupyterlab~=3.0) 2023-09-16T03:19:28,244 WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ProtocolError('Connection aborted.', RemoteDisconnected('Remote end closed connection without response'))': /simple/fqdn/fqdn-1.5.1-py3-none-any.whl 2023-09-16T03:19:31,305 Using cached https://www.piwheels.org/simple/fqdn/fqdn-1.5.1-py3-none-any.whl (9.1 kB) 2023-09-16T03:19:31,489 Collecting isoduration (from jsonschema>=4.18.0->jupyterlab-server~=2.19->jupyterlab~=3.0) 2023-09-16T03:19:31,511 Using cached https://www.piwheels.org/simple/isoduration/isoduration-20.11.0-py3-none-any.whl (11 kB) 2023-09-16T03:19:31,632 Collecting jsonpointer>1.13 (from jsonschema>=4.18.0->jupyterlab-server~=2.19->jupyterlab~=3.0) 2023-09-16T03:19:31,647 Using cached https://www.piwheels.org/simple/jsonpointer/jsonpointer-2.4-py2.py3-none-any.whl (7.7 kB) 2023-09-16T03:19:31,722 Collecting uri-template (from jsonschema>=4.18.0->jupyterlab-server~=2.19->jupyterlab~=3.0) 2023-09-16T03:19:31,737 Using cached https://www.piwheels.org/simple/uri-template/uri_template-1.3.0-py3-none-any.whl (11 kB) 2023-09-16T03:19:31,828 Collecting webcolors>=1.11 (from jsonschema>=4.18.0->jupyterlab-server~=2.19->jupyterlab~=3.0) 2023-09-16T03:19:31,867 Using cached https://www.piwheels.org/simple/webcolors/webcolors-1.13-py3-none-any.whl (14 kB) 2023-09-16T03:19:33,523 Collecting cffi>=1.0.1 (from argon2-cffi-bindings->argon2-cffi->jupyter-server<3,>=1.16.0->jupyterlab~=3.0) 2023-09-16T03:19:33,565 Using cached https://www.piwheels.org/simple/cffi/cffi-1.15.1-cp311-cp311-linux_armv7l.whl (379 kB) 2023-09-16T03:19:33,843 Collecting soupsieve>1.2 (from beautifulsoup4->nbconvert>=6.4.4->jupyter-server<3,>=1.16.0->jupyterlab~=3.0) 2023-09-16T03:19:33,860 Using cached https://www.piwheels.org/simple/soupsieve/soupsieve-2.5-py3-none-any.whl (36 kB) 2023-09-16T03:19:34,730 Collecting pycparser (from cffi>=1.0.1->argon2-cffi-bindings->argon2-cffi->jupyter-server<3,>=1.16.0->jupyterlab~=3.0) 2023-09-16T03:19:34,769 Using cached https://www.piwheels.org/simple/pycparser/pycparser-2.21-py2.py3-none-any.whl (119 kB) 2023-09-16T03:19:35,434 Collecting arrow>=0.15.0 (from isoduration->jsonschema>=4.18.0->jupyterlab-server~=2.19->jupyterlab~=3.0) 2023-09-16T03:19:35,456 Using cached https://www.piwheels.org/simple/arrow/arrow-1.2.3-py3-none-any.whl (66 kB) 2023-09-16T03:19:35,845 Downloading ipywidgets-8.1.1-py3-none-any.whl (139 kB) 2023-09-16T03:19:36,583 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 139.4/139.4 kB 179.0 kB/s eta 0:00:00 2023-09-16T03:19:36,624 Using cached setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-09-16T03:19:36,664 Using cached jupyterlab_server-2.25.0-py3-none-any.whl (57 kB) 2023-09-16T03:19:36,678 Downloading jupyterlab_widgets-3.0.9-py3-none-any.whl (214 kB) 2023-09-16T03:19:36,707 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 214.9/214.9 kB 10.0 MB/s eta 0:00:00 2023-09-16T03:19:36,723 Using cached traitlets-5.10.0-py3-none-any.whl (120 kB) 2023-09-16T03:19:36,843 Downloading widgetsnbextension-4.0.9-py3-none-any.whl (2.3 MB) 2023-09-16T03:19:37,055 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 2.3/2.3 MB 11.2 MB/s eta 0:00:00 2023-09-16T03:19:37,096 Using cached websocket_client-1.6.3-py3-none-any.whl (57 kB) 2023-09-16T03:19:37,220 Using cached debugpy-1.8.0-py2.py3-none-any.whl (5.0 MB) 2023-09-16T03:19:37,341 Using cached rpds_py-0.10.3-cp311-cp311-manylinux_2_17_armv7l.manylinux2014_armv7l.whl (1.2 MB) 2023-09-16T03:19:42,328 Installing collected packages: y-py, webencodings, wcwidth, pure-eval, ptyprocess, pickleshare, json5, ipython-genutils, fastjsonschema, executing, backcall, widgetsnbextension, wheel, websocket-client, webcolors, urllib3, uri-template, traitlets, tornado, tinycss2, soupsieve, sniffio, six, setuptools, send2trash, rpds-py, rfc3986-validator, pyzmq, pyyaml, python-json-logger, pygments, pycparser, psutil, prompt-toolkit, prometheus-client, platformdirs, pexpect, parso, pandocfilters, packaging, overrides, nest-asyncio, mistune, MarkupSafe, jupyterlab-widgets, jupyterlab-pygments, jupyter-ydoc, jsonpointer, idna, fqdn, entrypoints, defusedxml, decorator, debugpy, charset-normalizer, certifi, babel, attrs, aiosqlite, aiofiles, ypy-websocket, terminado, rfc3339-validator, requests, referencing, python-dateutil, matplotlib-inline, jupyter_packaging, jupyter-core, jinja2, jedi, comm, cffi, bleach, beautifulsoup4, asttokens, anyio, stack-data, jupyter-server-terminals, jupyter-client, jsonschema-specifications, arrow, argon2-cffi-bindings, jsonschema, isoduration, ipython, argon2-cffi, nbformat, ipywidgets, ipykernel, nbclient, jupyter-events, nbconvert, jupyter-server, notebook-shim, jupyterlab-server, jupyter-server-fileid, nbclassic, jupyter-server-ydoc, notebook, jupyterlab 2023-09-16T03:19:43,542 Creating /tmp/pip-build-env-o3zcmxqk/overlay/local/bin 2023-09-16T03:19:43,545 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/pyjson5 to 755 2023-09-16T03:19:46,147 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/wheel to 755 2023-09-16T03:19:46,350 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/wsdump to 755 2023-09-16T03:19:51,170 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/send2trash to 755 2023-09-16T03:19:57,377 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/pygmentize to 755 2023-09-16T03:20:12,828 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/normalizer to 755 2023-09-16T03:20:15,665 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/pybabel to 755 2023-09-16T03:20:19,944 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter to 755 2023-09-16T03:20:19,949 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-migrate to 755 2023-09-16T03:20:19,954 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-troubleshoot to 755 2023-09-16T03:20:28,657 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-kernel to 755 2023-09-16T03:20:28,666 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-kernelspec to 755 2023-09-16T03:20:28,672 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-run to 755 2023-09-16T03:20:29,647 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jsonschema to 755 2023-09-16T03:20:32,009 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/ipython to 755 2023-09-16T03:20:32,012 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/ipython3 to 755 2023-09-16T03:20:32,344 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-trust to 755 2023-09-16T03:20:33,570 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-execute to 755 2023-09-16T03:20:33,649 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-events to 755 2023-09-16T03:20:34,150 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-dejavu to 755 2023-09-16T03:20:34,152 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-nbconvert to 755 2023-09-16T03:20:34,931 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-server to 755 2023-09-16T03:20:35,270 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-fileid to 755 2023-09-16T03:20:38,521 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-nbclassic to 755 2023-09-16T03:20:38,523 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-nbclassic-bundlerextension to 755 2023-09-16T03:20:38,525 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-nbclassic-extension to 755 2023-09-16T03:20:38,526 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-nbclassic-serverextension to 755 2023-09-16T03:20:39,826 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-bundlerextension to 755 2023-09-16T03:20:39,828 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-nbextension to 755 2023-09-16T03:20:39,830 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-notebook to 755 2023-09-16T03:20:39,832 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-serverextension to 755 2023-09-16T03:20:41,821 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jlpm to 755 2023-09-16T03:20:41,823 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-lab to 755 2023-09-16T03:20:41,825 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-labextension to 755 2023-09-16T03:20:41,827 changing mode of /tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jupyter-labhub to 755 2023-09-16T03:20:48,724 ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. 2023-09-16T03:20:48,725 conan 2.0.10 requires urllib3<1.27,>=1.26.6, but you have urllib3 2.0.4 which is incompatible. 2023-09-16T03:20:48,726 Successfully installed MarkupSafe-2.1.3 aiofiles-22.1.0 aiosqlite-0.19.0 anyio-4.0.0 argon2-cffi-23.1.0 argon2-cffi-bindings-21.2.0 arrow-1.2.3 asttokens-2.4.0 attrs-23.1.0 babel-2.12.1 backcall-0.2.0 beautifulsoup4-4.12.2 bleach-6.0.0 certifi-2023.7.22 cffi-1.15.1 charset-normalizer-3.2.0 comm-0.1.4 debugpy-1.8.0 decorator-5.1.1 defusedxml-0.7.1 entrypoints-0.4 executing-1.2.0 fastjsonschema-2.18.0 fqdn-1.5.1 idna-3.4 ipykernel-6.25.2 ipython-8.15.0 ipython-genutils-0.2.0 ipywidgets-8.1.1 isoduration-20.11.0 jedi-0.19.0 jinja2-3.1.2 json5-0.9.14 jsonpointer-2.4 jsonschema-4.19.0 jsonschema-specifications-2023.7.1 jupyter-client-7.4.9 jupyter-core-5.3.1 jupyter-events-0.7.0 jupyter-server-2.7.3 jupyter-server-fileid-0.9.0 jupyter-server-terminals-0.4.4 jupyter-server-ydoc-0.8.0 jupyter-ydoc-0.2.5 jupyter_packaging-0.7.12 jupyterlab-3.6.5 jupyterlab-pygments-0.2.2 jupyterlab-server-2.25.0 jupyterlab-widgets-3.0.9 matplotlib-inline-0.1.6 mistune-3.0.1 nbclassic-1.0.0 nbclient-0.8.0 nbconvert-7.8.0 nbformat-5.9.2 nest-asyncio-1.5.7 notebook-6.5.5 notebook-shim-0.2.3 overrides-7.4.0 packaging-23.1 pandocfilters-1.5.0 parso-0.8.3 pexpect-4.8.0 pickleshare-0.7.5 platformdirs-3.10.0 prometheus-client-0.17.1 prompt-toolkit-3.0.39 psutil-5.9.5 ptyprocess-0.7.0 pure-eval-0.2.2 pycparser-2.21 pygments-2.16.1 python-dateutil-2.8.2 python-json-logger-2.0.7 pyyaml-6.0.1 pyzmq-24.0.1 referencing-0.30.2 requests-2.31.0 rfc3339-validator-0.1.4 rfc3986-validator-0.1.1 rpds-py-0.10.3 send2trash-1.8.2 setuptools-68.2.2 six-1.16.0 sniffio-1.3.0 soupsieve-2.5 stack-data-0.6.2 terminado-0.17.1 tinycss2-1.2.1 tornado-6.3.3 traitlets-5.10.0 uri-template-1.3.0 urllib3-2.0.4 wcwidth-0.2.6 webcolors-1.13 webencodings-0.5.1 websocket-client-1.6.3 wheel-0.41.2 widgetsnbextension-4.0.9 y-py-0.6.0 ypy-websocket-0.8.4 2023-09-16T03:20:50,217 Installing build dependencies: finished with status 'done' 2023-09-16T03:20:50,221 Getting requirements to build wheel: started 2023-09-16T03:20:50,222 Running command Getting requirements to build wheel 2023-09-16T03:20:51,095 /tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-09-16T03:20:51,096 !! 2023-09-16T03:20:51,097 ******************************************************************************** 2023-09-16T03:20:51,097 Usage of dash-separated 'description-file' will not be supported in future 2023-09-16T03:20:51,097 versions. Please use the underscore name 'description_file' instead. 2023-09-16T03:20:51,098 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-09-16T03:20:51,099 or your builds will no longer be supported. 2023-09-16T03:20:51,100 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-16T03:20:51,100 ******************************************************************************** 2023-09-16T03:20:51,101 !! 2023-09-16T03:20:51,102 opt = self.warn_dash_deprecation(opt, section) 2023-09-16T03:20:51,108 /tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/setuptools/config/setupcfg.py:293: _DeprecatedConfig: Deprecated config in `setup.cfg` 2023-09-16T03:20:51,109 !! 2023-09-16T03:20:51,110 ******************************************************************************** 2023-09-16T03:20:51,111 The license_file parameter is deprecated, use license_files instead. 2023-09-16T03:20:51,112 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-09-16T03:20:51,113 or your builds will no longer be supported. 2023-09-16T03:20:51,114 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-16T03:20:51,114 ******************************************************************************** 2023-09-16T03:20:51,116 !! 2023-09-16T03:20:51,116 parsed = self.parsers.get(option_name, lambda x: x)(value) 2023-09-16T03:20:51,232 running egg_info 2023-09-16T03:20:51,255 writing igv_jupyter.egg-info/PKG-INFO 2023-09-16T03:20:51,259 writing dependency_links to igv_jupyter.egg-info/dependency_links.txt 2023-09-16T03:20:51,261 writing requirements to igv_jupyter.egg-info/requires.txt 2023-09-16T03:20:51,262 writing top-level names to igv_jupyter.egg-info/top_level.txt 2023-09-16T03:20:51,312 reading manifest file 'igv_jupyter.egg-info/SOURCES.txt' 2023-09-16T03:20:51,329 reading manifest template 'MANIFEST.in' 2023-09-16T03:20:51,337 warning: no files found matching 'igv/nbextension/static/igvjs/*' 2023-09-16T03:20:51,339 warning: no files found matching 'igv/labextension/schemas/*' 2023-09-16T03:20:51,512 warning: no previously-included files matching '*~' found anywhere in distribution 2023-09-16T03:20:51,514 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-09-16T03:20:51,515 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2023-09-16T03:20:51,517 warning: no previously-included files matching '.git' found anywhere in distribution 2023-09-16T03:20:51,518 warning: no previously-included files matching '.ipynb_checkpoints' found anywhere in distribution 2023-09-16T03:20:51,519 adding license file 'LICENSE.md' 2023-09-16T03:20:51,526 writing manifest file 'igv_jupyter.egg-info/SOURCES.txt' 2023-09-16T03:20:51,638 Getting requirements to build wheel: finished with status 'done' 2023-09-16T03:20:51,767 Created temporary directory: /tmp/pip-modern-metadata-ag0v_12k 2023-09-16T03:20:51,769 Preparing metadata (pyproject.toml): started 2023-09-16T03:20:51,770 Running command Preparing metadata (pyproject.toml) 2023-09-16T03:20:52,567 /tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-09-16T03:20:52,568 !! 2023-09-16T03:20:52,569 ******************************************************************************** 2023-09-16T03:20:52,569 Usage of dash-separated 'description-file' will not be supported in future 2023-09-16T03:20:52,570 versions. Please use the underscore name 'description_file' instead. 2023-09-16T03:20:52,571 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-09-16T03:20:52,571 or your builds will no longer be supported. 2023-09-16T03:20:52,572 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-16T03:20:52,573 ******************************************************************************** 2023-09-16T03:20:52,574 !! 2023-09-16T03:20:52,574 opt = self.warn_dash_deprecation(opt, section) 2023-09-16T03:20:52,576 /tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/setuptools/config/setupcfg.py:293: _DeprecatedConfig: Deprecated config in `setup.cfg` 2023-09-16T03:20:52,576 !! 2023-09-16T03:20:52,578 ******************************************************************************** 2023-09-16T03:20:52,578 The license_file parameter is deprecated, use license_files instead. 2023-09-16T03:20:52,579 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-09-16T03:20:52,580 or your builds will no longer be supported. 2023-09-16T03:20:52,581 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-16T03:20:52,582 ******************************************************************************** 2023-09-16T03:20:52,583 !! 2023-09-16T03:20:52,583 parsed = self.parsers.get(option_name, lambda x: x)(value) 2023-09-16T03:20:52,614 running dist_info 2023-09-16T03:20:52,638 creating /tmp/pip-modern-metadata-ag0v_12k/igv_jupyter.egg-info 2023-09-16T03:20:52,661 writing /tmp/pip-modern-metadata-ag0v_12k/igv_jupyter.egg-info/PKG-INFO 2023-09-16T03:20:52,665 writing dependency_links to /tmp/pip-modern-metadata-ag0v_12k/igv_jupyter.egg-info/dependency_links.txt 2023-09-16T03:20:52,669 writing requirements to /tmp/pip-modern-metadata-ag0v_12k/igv_jupyter.egg-info/requires.txt 2023-09-16T03:20:52,670 writing top-level names to /tmp/pip-modern-metadata-ag0v_12k/igv_jupyter.egg-info/top_level.txt 2023-09-16T03:20:52,671 writing manifest file '/tmp/pip-modern-metadata-ag0v_12k/igv_jupyter.egg-info/SOURCES.txt' 2023-09-16T03:20:52,720 reading manifest file '/tmp/pip-modern-metadata-ag0v_12k/igv_jupyter.egg-info/SOURCES.txt' 2023-09-16T03:20:52,722 reading manifest template 'MANIFEST.in' 2023-09-16T03:20:52,727 warning: no files found matching 'igv/nbextension/static/igvjs/*' 2023-09-16T03:20:52,729 warning: no files found matching 'igv/labextension/schemas/*' 2023-09-16T03:20:52,887 warning: no previously-included files matching '*~' found anywhere in distribution 2023-09-16T03:20:52,888 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-09-16T03:20:52,888 warning: no previously-included files matching '*.pyo' found anywhere in distribution 2023-09-16T03:20:52,890 warning: no previously-included files matching '.git' found anywhere in distribution 2023-09-16T03:20:52,891 warning: no previously-included files matching '.ipynb_checkpoints' found anywhere in distribution 2023-09-16T03:20:52,892 adding license file 'LICENSE.md' 2023-09-16T03:20:52,896 writing manifest file '/tmp/pip-modern-metadata-ag0v_12k/igv_jupyter.egg-info/SOURCES.txt' 2023-09-16T03:20:52,897 creating '/tmp/pip-modern-metadata-ag0v_12k/igv_jupyter-1.0.0.dist-info' 2023-09-16T03:20:53,053 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-16T03:20:53,058 Source in /tmp/pip-wheel-vvdc70mi/igv-jupyter_3c934e678ce24ab793d8b5a541c34bc1 has version 1.0.0, which satisfies requirement igv-jupyter==1.0.0 from https://files.pythonhosted.org/packages/30/36/19353345fea4399435ea1542cfaae1a9658161128cb6e47d294bb25f9638/igv-jupyter-1.0.0.tar.gz 2023-09-16T03:20:53,059 Removed igv-jupyter==1.0.0 from https://files.pythonhosted.org/packages/30/36/19353345fea4399435ea1542cfaae1a9658161128cb6e47d294bb25f9638/igv-jupyter-1.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-gdmz8_o6' 2023-09-16T03:20:53,065 Created temporary directory: /tmp/pip-unpack-i94bvs9y 2023-09-16T03:20:53,066 Created temporary directory: /tmp/pip-unpack-burdp8fw 2023-09-16T03:20:53,071 Building wheels for collected packages: igv-jupyter 2023-09-16T03:20:53,076 Created temporary directory: /tmp/pip-wheel-dom5gm3q 2023-09-16T03:20:53,076 Destination directory: /tmp/pip-wheel-dom5gm3q 2023-09-16T03:20:53,078 Building wheel for igv-jupyter (pyproject.toml): started 2023-09-16T03:20:53,079 Running command Building wheel for igv-jupyter (pyproject.toml) 2023-09-16T03:20:53,912 /tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-09-16T03:20:53,912 !! 2023-09-16T03:20:53,913 ******************************************************************************** 2023-09-16T03:20:53,913 Usage of dash-separated 'description-file' will not be supported in future 2023-09-16T03:20:53,914 versions. Please use the underscore name 'description_file' instead. 2023-09-16T03:20:53,915 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-09-16T03:20:53,916 or your builds will no longer be supported. 2023-09-16T03:20:53,917 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-16T03:20:53,918 ******************************************************************************** 2023-09-16T03:20:53,919 !! 2023-09-16T03:20:53,919 opt = self.warn_dash_deprecation(opt, section) 2023-09-16T03:20:53,920 /tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/setuptools/config/setupcfg.py:293: _DeprecatedConfig: Deprecated config in `setup.cfg` 2023-09-16T03:20:53,921 !! 2023-09-16T03:20:53,922 ******************************************************************************** 2023-09-16T03:20:53,922 The license_file parameter is deprecated, use license_files instead. 2023-09-16T03:20:53,923 By 2023-Oct-30, you need to update your project and remove deprecated calls 2023-09-16T03:20:53,924 or your builds will no longer be supported. 2023-09-16T03:20:53,925 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-16T03:20:53,926 ******************************************************************************** 2023-09-16T03:20:53,927 !! 2023-09-16T03:20:53,927 parsed = self.parsers.get(option_name, lambda x: x)(value) 2023-09-16T03:20:53,931 running bdist_wheel 2023-09-16T03:20:54,000 running jsdeps 2023-09-16T03:20:54,002 Installing build dependencies with npm. This may take a while... 2023-09-16T03:20:54,002 > jlpm install 2023-09-16T03:20:57,599 Traceback (most recent call last): 2023-09-16T03:20:57,599 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jlpm", line 8, in 2023-09-16T03:20:57,600 sys.exit(main()) 2023-09-16T03:20:57,601 ^^^^^^ 2023-09-16T03:20:57,601 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/jupyterlab/jlpmapp.py", line 44, in main 2023-09-16T03:20:57,602 execvp("node", ["node", YARN_PATH] + argv) 2023-09-16T03:20:57,603 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/jupyterlab/jlpmapp.py", line 25, in execvp 2023-09-16T03:20:57,603 cmd = which(cmd) 2023-09-16T03:20:57,604 ^^^^^^^^^^ 2023-09-16T03:20:57,605 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/jupyterlab_server/process.py", line 58, in which 2023-09-16T03:20:57,606 raise ValueError(msg) 2023-09-16T03:20:57,606 ValueError: Please install Node.js and npm before continuing installation. You may be able to install Node.js from your package manager, from conda, or directly from the Node.js website (https://nodejs.org). 2023-09-16T03:20:57,833 Traceback (most recent call last): 2023-09-16T03:20:57,834 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 353, in 2023-09-16T03:20:57,834 main() 2023-09-16T03:20:57,835 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 335, in main 2023-09-16T03:20:57,835 json_out['return_val'] = hook(**hook_input['kwargs']) 2023-09-16T03:20:57,836 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-16T03:20:57,836 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 251, in build_wheel 2023-09-16T03:20:57,837 return _build_backend().build_wheel(wheel_directory, config_settings, 2023-09-16T03:20:57,837 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-16T03:20:57,838 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/setuptools/build_meta.py", line 434, in build_wheel 2023-09-16T03:20:57,838 return self._build_with_temp_dir( 2023-09-16T03:20:57,839 ^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-16T03:20:57,839 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/setuptools/build_meta.py", line 419, in _build_with_temp_dir 2023-09-16T03:20:57,840 self.run_setup() 2023-09-16T03:20:57,841 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/setuptools/build_meta.py", line 341, in run_setup 2023-09-16T03:20:57,841 exec(code, locals()) 2023-09-16T03:20:57,842 File "", line 96, in 2023-09-16T03:20:57,842 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/setuptools/__init__.py", line 103, in setup 2023-09-16T03:20:57,843 return distutils.core.setup(**attrs) 2023-09-16T03:20:57,843 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-16T03:20:57,844 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/core.py", line 185, in setup 2023-09-16T03:20:57,845 return run_commands(dist) 2023-09-16T03:20:57,845 ^^^^^^^^^^^^^^^^^^ 2023-09-16T03:20:57,846 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/core.py", line 201, in run_commands 2023-09-16T03:20:57,846 dist.run_commands() 2023-09-16T03:20:57,847 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 969, in run_commands 2023-09-16T03:20:57,847 self.run_command(cmd) 2023-09-16T03:20:57,848 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py", line 989, in run_command 2023-09-16T03:20:57,849 super().run_command(command) 2023-09-16T03:20:57,849 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 988, in run_command 2023-09-16T03:20:57,850 cmd_obj.run() 2023-09-16T03:20:57,850 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/jupyter_packaging/setupbase.py", line 503, in run 2023-09-16T03:20:57,851 [self.run_command(cmd) for cmd in cmds] 2023-09-16T03:20:57,852 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/jupyter_packaging/setupbase.py", line 503, in 2023-09-16T03:20:57,852 [self.run_command(cmd) for cmd in cmds] 2023-09-16T03:20:57,853 ^^^^^^^^^^^^^^^^^^^^^ 2023-09-16T03:20:57,853 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py", line 318, in run_command 2023-09-16T03:20:57,853 self.distribution.run_command(command) 2023-09-16T03:20:57,854 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py", line 989, in run_command 2023-09-16T03:20:57,854 super().run_command(command) 2023-09-16T03:20:57,855 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 988, in run_command 2023-09-16T03:20:57,856 cmd_obj.run() 2023-09-16T03:20:57,856 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/jupyter_packaging/setupbase.py", line 424, in run 2023-09-16T03:20:57,857 self.command.run() 2023-09-16T03:20:57,858 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/jupyter_packaging/setupbase.py", line 274, in run 2023-09-16T03:20:57,858 c.run() 2023-09-16T03:20:57,859 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/jupyter_packaging/setupbase.py", line 379, in run 2023-09-16T03:20:57,860 run(npm_cmd + ['install'], cwd=node_package) 2023-09-16T03:20:57,860 File "/tmp/pip-build-env-o3zcmxqk/overlay/local/lib/python3.11/dist-packages/jupyter_packaging/setupbase.py", line 225, in run 2023-09-16T03:20:57,861 return subprocess.check_call(cmd, **kwargs) 2023-09-16T03:20:57,862 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-16T03:20:57,863 File "/usr/lib/python3.11/subprocess.py", line 413, in check_call 2023-09-16T03:20:57,864 raise CalledProcessError(retcode, cmd) 2023-09-16T03:20:57,865 subprocess.CalledProcessError: Command '['/tmp/pip-build-env-o3zcmxqk/overlay/local/bin/jlpm', 'install']' returned non-zero exit status 1. 2023-09-16T03:20:57,967 ERROR: [present-rich] Building wheel for igv-jupyter (pyproject.toml) exited with 1 2023-09-16T03:20:57,980 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py build_wheel /tmp/tmpu37mk_3l[/] 2023-09-16T03:20:57,981 [bold magenta]cwd[/]: /tmp/pip-wheel-vvdc70mi/igv-jupyter_3c934e678ce24ab793d8b5a541c34bc1 2023-09-16T03:20:57,982 Building wheel for igv-jupyter (pyproject.toml): finished with status 'error' 2023-09-16T03:20:57,984 ERROR: Failed building wheel for igv-jupyter 2023-09-16T03:20:57,986 Failed to build igv-jupyter 2023-09-16T03:20:57,987 ERROR: Failed to build one or more wheels 2023-09-16T03:20:57,989 Exception information: 2023-09-16T03:20:57,989 Traceback (most recent call last): 2023-09-16T03:20:57,989 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-09-16T03:20:57,989 status = run_func(*args) 2023-09-16T03:20:57,989 ^^^^^^^^^^^^^^^ 2023-09-16T03:20:57,989 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-09-16T03:20:57,989 return func(self, options, args) 2023-09-16T03:20:57,989 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-16T03:20:57,989 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 181, in run 2023-09-16T03:20:57,989 raise CommandError("Failed to build one or more wheels") 2023-09-16T03:20:57,989 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2023-09-16T03:20:57,993 Removed build tracker: '/tmp/pip-build-tracker-gdmz8_o6'